Pregenerated sensors for SAP25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079165Ensembl transcript IDs: ENSMUST00000166099.3, ENSMUST00000177466.8
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGCCCCTGGCCCACAGCTaGGCTCCACCAGCCGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TLIYCQQNSLGEKKAPVEPLAHS*APPAEV Trigger: GACCTCGGCTGGTGGAGCCCAGCTGTGGGCCAGGGG...CTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR TCA 90 bp | ACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGCTGGCTCAGATGGGCTaGGGGCCTGGGGCTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TLIYCQQNSLGEKKAPVELAQMG*GPGAVS Trigger: GCTCACAGCCCCAGGCCCTCAGCCCATCTGAGCCAG...CTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR GCA 90 bp | TCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGGAGGCTCAGTAGCCAGGTaGCTGGAAGGCGGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SDLLSTKQLGGEESTRGGGSVAR*LEGGSC Trigger: GCAGCTGCCGCCTTCCAGGCACCTGGCTACTGAGCC...TCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR TCA 90 bp | ACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGTCATCTCTGCCTCGCTaGGCCAGGTGGAGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLIYCQQNSLGEKKAPVESSLPR*ARWRSR Trigger: CCTGCTCCTCCACCTGGCTCAGCGAGGCAGAGATGA...CTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | CTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGGAGGTGGAGGAGCAGGCCTaGGATGAGGACGGATGCACA | + |
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Preference number: 4 (lower is better) Translates to: LIYCQQNSLGEKKAPVEEVEEQA*DEDGCT Trigger: TGTGCATCCGTCCTCATCCCAGGCCTGCTCCTCCAC...CTCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | CTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGGAGCAGGGTCTGGGCAGCTaGTGGAAGGCAGAGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LIYCQQNSLGEKKAPVEEQGLGS*WKAESL Trigger: CAAGCTCTCTGCCTTCCACCAGCTGCCCAGACCCTG...CTCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | TCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGGAAGCTTGCCACGCAGTTaGGTGTCTGCTCTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SDLLSTKQLGGEESTRGGSLPRS*VSALPG Trigger: GCCAGGGAGAGCAGACACCCAACTGCGTGGCAAGCT...TCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR GCA 90 bp | TCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGGACTTCCTGGAGTCCATTaGCTGCTGAGGGGGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SDLLSTKQLGGEESTRGGLPGVH*LLRGLG Trigger: ACCAAGCCCCCTCAGCAGGCAATGGACTCCAGGAAG...TCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR GCA 90 bp | AACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGATCTCCCTGGCTCATCTaGAGCAGACCAGCAAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: NSDLLSTKQLGGEESTRGSPWLI*SRPARA Trigger: CGCCCTTGCTGGTCTGCTGCAGATGAGCCAGGGAGA...TCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | TCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGGACAGCTGCTTTCTTCCTaGCTCAGATGGGCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SDLLSTKQLGGEESTRGGQLLSS*LRWAEG Trigger: GCCCTCAGCCCATCTGAGCCAGGAAGAAAGCAGCTG...TCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | ACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGAGACAAAGATACCCCTaGCCCACAGCTGGGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TLIYCQQNSLGEKKAPVERQRYP*PTAGLH Trigger: GTGGAGCCCAGCTGTGGGCCAGGGGTATCTTTGTCT...CTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | AACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGACAGAGACAGGGTCTaGGCAGCTGGTGGAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NSDLLSTKQLGGEESTRGDRDRV*AAGGRQ Trigger: CTGCCTTCCACCAGCTGCCCAGACCCTGTCTCTGTC...TCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR TCA 90 bp | TGGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCTTCCTCTGGGCGTTCTaGGGTGGTTGGGCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WFANSDLLSTKQLGGEESFLWAF*GGWAPA Trigger: GGCAGGAGCCCAACCACCTCAGAACGCCCAGAGGAA...GCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR GCA 90 bp | CTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGGAGAGGTGGTTGGGCTCCTaGCCCAGTTATCATACATCG | + |
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Preference number: 4 (lower is better) Translates to: LIYCQQNSLGEKKAPVEERWLGS*PSYHTS Trigger: CGATGTATGATAACTGGGGCAGGAGCCCAACCACCT...CTCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR GCA 90 bp | CTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGAGGAGTCCTTAGACACCACCTaGTCTTCCTCTGGGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LIYCQQNSLGEKKAPVEESLDTT*SSSGRS Trigger: AGAACGCCCAGAGGAAGAGCAGGTGGTGTCTAAGGA...CTCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | TGGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCTCTTCCTGGCTCAGATaGGCTGAGGGCCTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WFANSDLLSTKQLGGEESSSWLR*AEGLGL Trigger: CAGCCCCAGGCCCTCAGCCCATCTGAGCCAGGAAGA...GCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| 3UTR CAA 72 bp | GGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTaGGGGGAGAAGAAAGCACCCGTGGAGGAGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GLQTLIYCQQNS*GEKKAPVEEWG Trigger: CCCCCACTCCTCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR GCA 90 bp | AACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACCCGTGGACTGGAAGGCGGCAGCTaGTTTCTTCCTGGCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: NSDLLSTKQLGGEESTRGLEGGS*FLPGSD Trigger: ATCTGAGCCAGGAAGAAAGCAGCTGCCGCCTTCCAG...TCCACGGGTGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | GGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCAGGTCTGGGCAGCTGGTaGAAGGCAGAGAGCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLQTLIYCQQNSLGEKKAGLGSW*KAESLP Trigger: TGGCAAGCTCTCTGCCTTCCACCAGCTGCCCAGACC...TGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR GCA 90 bp | TGGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCACGTACTGGGGCTTCTaGAGTCGGCTCAGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: WFANSDLLSTKQLGGEESTYWGF*SRLSSQ Trigger: CTGGCTACTGAGCCGACTGCAGAAGCCCCAGTACGT...GCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | GGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCAGGTCCTGCATTAGCCTaGTGGCTGGGATCCCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: GLQTLIYCQQNSLGEKKAGPALA*WLGSRS Trigger: ACTTCGGGATCCCAGCCACCAGGCTAATGCAGGACC...TGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | GGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCAGGAGCAGCAGCTTCCTaGAGTCCATTGCCTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GLQTLIYCQQNSLGEKKAGAAAS*SPLPAE Trigger: CTCAGCAGGCAATGGACTCCAGGAAGCTGCTGCTCC...TGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | GGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCAGGTGTCTGCTCTCCCTaGCTCATCTGCAGCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: GLQTLIYCQQNSLGEKKAGVCSP*LICSRP Trigger: TGGTCTGCTGCAGATGAGCCAGGGAGAGCAGACACC...TGCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS-3UTR CCA 90 bp | TGGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCAGCTCTGGTCACCACTaGGACCTGGGTCTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: WFANSDLLSTKQLGGEESSSGHH*DLGLQR Trigger: TCTCTGAAGACCCAGGTCCCAGTGGTGACCAGAGCT...GCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS CCA 90 bp | TGGTTTCCTCTCCAGAGCTCAAGGCCTCTCCGTGACCAGTGCCGGTaGGGAGGCCTAGCCCCTCGGTCGCCTCCTCCTGGCCTGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: WFPLQSSRPLRDQCR*GGLAPRSPPPGLWP Trigger: GGGCCACAGGCCAGGAGGAGGCGACCGAGGGGCTAGGCCTCCCCACCGGCACTGGTCACGGAGAGGCCTTGAGCTCTGGAGAGGAAACCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS TCA 90 bp | TCTTGCTCCTTCATGGTTTCCTCTCCAGAGCTCAAGGCCTCTCCGTaGCCAGTGCCGGTGGGGAGGCCTAGCCCCTCGGTCGCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SCSFMVSSPELKASP*PVPVGRPSPSVASS Trigger: GGAGGAGGCGACCGAGGGGCTAGGCCTCCCCACCGGCACTGGTCACGGAGAGGCCTTGAGCTCTGGAGAGGAAACCATGAAGGAGCAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS GCA 90 bp | CAAAGATACCCCTGGCCCACAGCTGGGCTCCACCAGCCGAGGTCCTaGATTAGCCTGGTGGCTGGGATCCCGAAGTGGCAGTGGAGACAT | + |
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Preference number: 5 (lower is better) Translates to: QRYPWPTAGLHQPRS*ISLVAGIPKWQWRH Trigger: ATGTCTCCACTGCCACTTCGGGATCCCAGCCACCAGGCTAATGCAGGACCTCGGCTGGTGGAGCCCAGCTGTGGGCCAGGGGTATCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS GCA 90 bp | GGAGAAAGACGTACTGGGGCTTCTGCAGTCGGCTCAGTAGCCAGGTaGCTGGAAGGCGGCAGCTGCTTTCTTCCTGGCTCAGATGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GERRTGASAVGSVAR*LEGGSCFLPGSDGL Trigger: CAGCCCATCTGAGCCAGGAAGAAAGCAGCTGCCGCCTTCCAGGCACCTGGCTACTGAGCCGACTGCAGAAGCCCCAGTACGTCTTTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS CCA 90 bp | GTGGAAGGCAGAGAGCTTGCCACGCAGTTGGGTGTCTGCTCTCCCTaGCTCATCTGCAGCAGACCAGCAAGGGCGATCATCTCTGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: VEGRELATQLGVCSP*LICSRPARAIISAS Trigger: CGAGGCAGAGATGATCGCCCTTGCTGGTCTGCTGCAGATGAGCCAGGGAGAGCAGACACCCAACTGCGTGGCAAGCTCTCTGCCTTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS CCA 90 bp | CACTGGGACCTGGGTCTTCAGAGACAGAGACAGGGTCTGGGCAGCTaGTGGAAGGCAGAGAGCTTGCCACGCAGTTGGGTGTCTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: HWDLGLQRQRQGLGS*WKAESLPRSWVSAL Trigger: GAGAGCAGACACCCAACTGCGTGGCAAGCTCTCTGCCTTCCACCAGCTGCCCAGACCCTGTCTCTGTCTCTGAAGACCCAGGTCCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS CCA 90 bp | CTGGTCACCACTGGGACCTGGGTCTTCAGAGACAGAGACAGGGTCTaGGCAGCTGGTGGAAGGCAGAGAGCTTGCCACGCAGTTGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LVTTGTWVFRDRDRV*AAGGRQRACHAVGC Trigger: ACACCCAACTGCGTGGCAAGCTCTCTGCCTTCCACCAGCTGCCCAGACCCTGTCTCTGTCTCTGAAGACCCAGGTCCCAGTGGTGACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS CCA 90 bp | GAAGGCGGCAGCTGCTTTCTTCCTGGCTCAGATGGGCTGAGGGCCTaGGGCTGTGAGCTGTCCTGCACAGGCGTTTCTTGCTCCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: EGGSCFLPGSDGLRA*GCELSCTGVSCSFM Trigger: CATGAAGGAGCAAGAAACGCCTGTGCAGGACAGCTCACAGCCCCAGGCCCTCAGCCCATCTGAGCCAGGAAGAAAGCAGCTGCCGCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS TCA 90 bp | CAGCTGCTTTCTTCCTGGCTCAGATGGGCTGAGGGCCTGGGGCTGTaGGCTGTCCTGCACAGGCGTTTCTTGCTCCTTCATGGTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QLLSSWLRWAEGLGL*AVLHRRFLLLHGFL Trigger: GAGGAAACCATGAAGGAGCAAGAAACGCCTGTGCAGGACAGCTCACAGCCCCAGGCCCTCAGCCCATCTGAGCCAGGAAGAAAGCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS-3UTR CAA 90 bp | TGGTTTGCAAACTCTGATTTATTGTCAACAAAACAGCTTGGGGGAGAAGAAAGCGCTTCCTGGAGTCCATaGCCTGCTGAGGGGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: WFANSDLLSTKQLGGEESASWSP*PAEGAW Trigger: CCAAGCCCCCTCAGCAGGCAATGGACTCCAGGAAGC...GCTTTCTTCTCCCCCAAGCTGTTTTGTTGACAATAAATCAGAGTTTGCAAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166099.3 |
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| CDS CCA 72 bp | CTCCAGAGCTCAAGGCCTCTCCGTGACCAGTGCCGGTaGGGAGGCCTAGCCCCTCGGTCGCCTCCTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LQSSRPLRDQCR*GGLAPRSPPPG Trigger: GCCAGGAGGAGGCGACCGAGGGGCTAGGCCTCCCCACCGGCACTGGTCACGGAGAGGCCTTGAGCTCTGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS GCA 72 bp | CCCTGGCCCACAGCTGGGCTCCACCAGCCGAGGTCCTaGATTAGCCTGGTGGCTGGGATCCCGAAGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PWPTAGLHQPRS*ISLVAGIPKWQ Trigger: CTGCCACTTCGGGATCCCAGCCACCAGGCTAATGCAGGACCTCGGCTGGTGGAGCCCAGCTGTGGGCCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS TCA 72 bp | AGGCCTGGGATGAGGACGGATGCACAGAGGGCGACATaGTGGGCGGTGGGAGCAGCAGCTTCCTGGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RPGMRTDAQRAT*WAVGAAASWSP Trigger: TGGACTCCAGGAAGCTGCTGCTCCCACCGCCCATCATGTCGCCCTCTGTGCATCCGTCCTCATCCCAGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS TCA 72 bp | TTCATGGTTTCCTCTCCAGAGCTCAAGGCCTCTCCGTaGCCAGTGCCGGTGGGGAGGCCTAGCCCCTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: FMVSSPELKASP*PVPVGRPSPSV Trigger: GACCGAGGGGCTAGGCCTCCCCACCGGCACTGGTCACGGAGAGGCCTTGAGCTCTGGAGAGGAAACCATGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS CCA 72 bp | GGCAGCTGGTGGAAGGCAGAGAGCTTGCCACGCAGTTaGGTGTCTGCTCTCCCTGGCTCATCTGCAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GSWWKAESLPRS*VSALPGSSAAD Trigger: GTCTGCTGCAGATGAGCCAGGGAGAGCAGACACCCAACTGCGTGGCAAGCTCTCTGCCTTCCACCAGCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS TCA 72 bp | GATCCCGAAGTGGCAGTGGAGACATCCTTGAGGGGGTaGCCTGGGAGGTCACCCGGGGAGAAAGACGTACTG | + |
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Preference number: 6 (lower is better) Translates to: DPEVAVETSLRG*PGRSPGEKDVL Trigger: CAGTACGTCTTTCTCCCCGGGTGACCTCCCAGGTCACCCCCTCAAGGATGTCTCCACTGCCACTTCGGGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS GCA 72 bp | GTGGAAGGCAGAGAGCTTGCCACGCAGTTGGGTGTCTaGTCTCCCTGGCTCATCTGCAGCAGACCAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VEGRELATQLGV*SPWLICSRPAR Trigger: CCTTGCTGGTCTGCTGCAGATGAGCCAGGGAGAGCAGACACCCAACTGCGTGGCAAGCTCTCTGCCTTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS CCA 72 bp | CTGGGTCTTCAGAGACAGAGACAGGGTCTGGGCAGCTaGTGGAAGGCAGAGAGCTTGCCACGCAGTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LGLQRQRQGLGS*WKAESLPRSWV Trigger: CACCCAACTGCGTGGCAAGCTCTCTGCCTTCCACCAGCTGCCCAGACCCTGTCTCTGTCTCTGAAGACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS CCA 72 bp | AGCTGCTTTCTTCCTGGCTCAGATGGGCTGAGGGCCTaGGGCTGTGAGCTGTCCTGCACAGGCGTTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SCFLPGSDGLRA*GCELSCTGVSC Trigger: GCAAGAAACGCCTGTGCAGGACAGCTCACAGCCCCAGGCCCTCAGCCCATCTGAGCCAGGAAGAAAGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS GCA 72 bp | GCCTGGGGCTGTGAGCTGTCCTGCACAGGCGTTTCTTaGTCCTTCATGGTTTCCTCTCCAGAGCTCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: AWGCELSCTGVS*SFMVSSPELKA Trigger: GGCCTTGAGCTCTGGAGAGGAAACCATGAAGGAGCAAGAAACGCCTGTGCAGGACAGCTCACAGCCCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS CCA 72 bp | AGAGAGCTTGCCACGCAGTTGGGTGTCTGCTCTCCCTaGCTCATCTGCAGCAGACCAGCAAGGGCGATCATC | + |
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Preference number: 6 (lower is better) Translates to: RELATQLGVCSP*LICSRPARAII Trigger: GATGATCGCCCTTGCTGGTCTGCTGCAGATGAGCCAGGGAGAGCAGACACCCAACTGCGTGGCAAGCTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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| CDS CCA 72 bp | GTGAGCTGTCCTGCACAGGCGTTTCTTGCTCCTTCATaGTTTCCTCTCCAGAGCTCAAGGCCTCTCCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: VSCPAQAFLAPS*FPLQSSRPLRD Trigger: GTCACGGAGAGGCCTTGAGCTCTGGAGAGGAAACCATGAAGGAGCAAGAAACGCCTGTGCAGGACAGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177466.8 |
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| CDS CCA 72 bp | CTCCTGCCCCAGTTATCATACATCGGCCAGGAAGGATaGCACAGTGTCCTGTTAGACAAAGATACCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLPQLSYIGQEG*HSVLLDKDTPG Trigger: GCCAGGGGTATCTTTGTCTAACAGGACACTGTGCCATCCTTCCTGGCCGATGTATGATAACTGGGGCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166099.3 ENSMUST00000177466.8 |
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