Pregenerated sensors for SANBR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042208Ensembl transcript IDs: ENSMUST00000043356.13, ENSMUST00000093267.11, ENSMUST00000109532.9, ENSMUST00000123909.2, ENSMUST00000131612.2, ENSMUST00000141353.8, ENSMUST00000155903.8, ENSMUST00000180260.8
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCATCTTCAGTGACCTCAGACCCCGTGGTATACTCTTCCTCTTCTaGGAACAGCGACTGTTGTTTCAACTGCAGAGTCCAGTTTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: FIFSDLRPRGILFLF*EQRLLFQLQSPVFQ Trigger: CTGAAAAACTGGACTCTGCAGTTGAAACAACAGTCGCTGTTCTCAGAAGAGGAAGAGTATACCACGGGGTCTGAGGTCACTGAAGATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000123909.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 90 bp | CTTTGGGCGTTAATCCAGGCACAAGCCTTGCCACAGTTTCCCAGTTaGTGGTCTGAGGGATTCCAATCAATGGATAAAGAATCATATCCA | + |
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Preference number: 5 (lower is better) Translates to: LWALIQAQALPQFPS*WSEGFQSMDKESYP Trigger: TGGATATGATTCTTTATCCATTGATTGGAATCCCTCAGACCATCAACTGGGAAACTGTGGCAAGGCTTGTGCCTGGATTAACGCCCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 90 bp | TTTCAGACATCCGCCGCTGATCATCTTCTCTTTGTGCATCTTGGTTaGATCTCAAGGATCTTGAGGCATCCCATTTATTCTTCTGCATAC | + |
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Preference number: 5 (lower is better) Translates to: FQTSAADHLLFVHLG*ISRILRHPIYSSAY Trigger: GTATGCAGAAGAATAAATGGGATGCCTCAAGATCCTTGAGATTCAACCAAGATGCACAAAGAGAAGATGATCAGCGGCGGATGTCTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000123909.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 90 bp | TCCAGTCTCTTCTCCAGCATTACGAGCAGTACAGTTTTCACTTTCTaGAGAGCAATTCCTTGTGGTAGCTATACTATGTCTTCCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SSLFSSITSSTVFTF*RAIPCGSYTMSSCF Trigger: AAAGCAGGAAGACATAGTATAGCTACCACAAGGAATTGCTCTTCAGAAAGTGAAAACTGTACTGCTCGTAATGCTGGAGAAGAGACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 90 bp | CTGATCATCTTCTCTTTGTGCATCTTGGTTGAATCTCAAGGATCTTaGGGCATCCCATTTATTCTTCTGCATACTCACAACAAAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LIIFSLCILVESQGS*GIPFILLHTHNKRR Trigger: TCTCCTTTTGTTGTGAGTATGCAGAAGAATAAATGGGATGCCTCAAGATCCTTGAGATTCAACCAAGATGCACAAAGAGAAGATGATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000123909.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS GCA 90 bp | AATTTCATTGTGTGTGAACAGATCAGCTATGCGTGTAAGAAGGTTTaGATTGATACAGTTCATGTTGCATGGAGCAGCTACTATGGCATT | + |
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Preference number: 5 (lower is better) Translates to: NFIVCEQISYACKKV*IDTVHVAWSSYYGI Trigger: AATGCCATAGTAGCTGCTCCATGCAACATGAACTGTATCAATGCAAACCTTCTTACACGCATAGCTGATCTGTTCACACACAATGAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000141353.8 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CCA 90 bp | CCTTGCCACAGTTTCCCAGTTGATGGTCTGAGGGATTCCAATCAATaGATAAAGAATCATATCCAATACCATTTGGTTATTATTATTCAG | + |
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Preference number: 5 (lower is better) Translates to: PCHSFPVDGLRDSNQ*IKNHIQYHLVIIIQ Trigger: CTGAATAATAATAACCAAATGGTATTGGATATGATTCTTTATCCATTGATTGGAATCCCTCAGACCATCAACTGGGAAACTGTGGCAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000131612.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CCA 90 bp | ACACAAACAGCATCGATAGAGTGTTGCTGCATTGTTTCTAGAATCTaGATTGGAGTATTCAGGATCAAAGAGTCTTTCAATCTTCTTACA | + |
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Preference number: 5 (lower is better) Translates to: TQTASIECCCIVSRI*IGVFRIKESFNLLT Trigger: TGTAAGAAGATTGAAAGACTCTTTGATCCTGAATACTCCAATCCAGATTCTAGAAACAATGCAGCAACACTCTATCGATGCTGTTTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000141353.8 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 72 bp | AGTGACCTCAGACCCCGTGGTATACTCTTCCTCTTCTaGGAACAGCGACTGTTGTTTCAACTGCAGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SDLRPRGILFLF*EQRLLFQLQSP Trigger: TGGACTCTGCAGTTGAAACAACAGTCGCTGTTCTCAGAAGAGGAAGAGTATACCACGGGGTCTGAGGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000123909.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 72 bp | TATCAGCCAGTTGAAAATGTGAACATCGCAATGAACTaGAATGTCCACTTCTTCCCAGCGCTGCGCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: YQPVENVNIAMN*NVHFFPALRIH Trigger: ATGGATGCGCAGCGCTGGGAAGAAGTGGACATTTCAGTTCATTGCGATGTTCACATTTTCAACTGGCTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000141353.8 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CAA 90 bp | GTTTCAACAGGACCCTCTCCAGTAGCCATTAAAGGGTTATACTGGTaGTCAACAGGTGAACTTCCACAGCTCTTTAGCTCATCAAACCTT | + |
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Preference number: 6 (lower is better) Translates to: VSTGPSPVAIKGLYW*STGELPQLFSSSNL Trigger: AAGGTTTGATGAGCTAAAGAGCTGTGGAAGTTCACCTGTTGACAACCAGTATAACCCTTTAATGGCTACTGGAGAGGGTCCTGTTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 72 bp | TTAATCCAGGCACAAGCCTTGCCACAGTTTCCCAGTTaGTGGTCTGAGGGATTCCAATCAATGGATAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LIQAQALPQFPS*WSEGFQSMDKE Trigger: TTCTTTATCCATTGATTGGAATCCCTCAGACCATCAACTGGGAAACTGTGGCAAGGCTTGTGCCTGGATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000131612.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 72 bp | TCCGCCGCTGATCATCTTCTCTTTGTGCATCTTGGTTaGATCTCAAGGATCTTGAGGCATCCCATTTATTCT | + |
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Preference number: 6 (lower is better) Translates to: SAADHLLFVHLG*ISRILRHPIYS Trigger: AGAATAAATGGGATGCCTCAAGATCCTTGAGATTCAACCAAGATGCACAAAGAGAAGATGATCAGCGGCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000123909.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CAA 72 bp | GTGAACAGATCAGCTATGCGTGTAAGAAGGTTTGCATaGATACAGTTCATGTTGCATGGAGCAGCTACTATG | + |
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Preference number: 6 (lower is better) Translates to: VNRSAMRVRRFA*IQFMLHGAATM Trigger: CATAGTAGCTGCTCCATGCAACATGAACTGTATCAATGCAAACCTTCTTACACGCATAGCTGATCTGTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000141353.8 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CAA 90 bp | CCTTGTGGTAGCTATACTATGTCTTCCTGCTTTAGAAACTGTATCTaGATCAACAGGAGTCTCTTGAAAATCTCCTTGTGTGTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PCGSYTMSSCFRNCI*INRSLLKISLCVQK Trigger: CTTCTGGACACACAAGGAGATTTTCAAGAGACTCCTGTTGATCAAGATACAGTTTCTAAAGCAGGAAGACATAGTATAGCTACCACAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CAA 90 bp | TCATTGTGTGTGAACAGATCAGCTATGCGTGTAAGAAGGTTTGCATaGATACAGTTCATGTTGCATGGAGCAGCTACTATGGCATTCATA | + |
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Preference number: 6 (lower is better) Translates to: SLCVNRSAMRVRRFA*IQFMLHGAATMAFI Trigger: TATGAATGCCATAGTAGCTGCTCCATGCAACATGAACTGTATCAATGCAAACCTTCTTACACGCATAGCTGATCTGTTCACACACAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000141353.8 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 72 bp | TTCTCCAGCATTACGAGCAGTACAGTTTTCACTTTCTaGAGAGCAATTCCTTGTGGTAGCTATACTATGTCT | + |
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Preference number: 6 (lower is better) Translates to: FSSITSSTVFTF*RAIPCGSYTMS Trigger: AGACATAGTATAGCTACCACAAGGAATTGCTCTTCAGAAAGTGAAAACTGTACTGCTCGTAATGCTGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS TCA 72 bp | TTCTCTTTGTGCATCTTGGTTGAATCTCAAGGATCTTaGGGCATCCCATTTATTCTTCTGCATACTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: FSLCILVESQGS*GIPFILLHTHN Trigger: GTTGTGAGTATGCAGAAGAATAAATGGGATGCCTCAAGATCCTTGAGATTCAACCAAGATGCACAAAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000123909.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CCA 72 bp | AAATCTTCTTTCAAGCTTTTTGCTTCATCACATACATaGATCACCATGTTTGGCCCTTCAGATTCTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: KSSFKLFASSHT*ITMFGPSDSPV Trigger: GACTGGAGAATCTGAAGGGCCAAACATGGTGATCCATGTATGTGATGAAGCAAAAAGCTTGAAAGAAGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CAA 90 bp | AGATCAGCTATGCGTGTAAGAAGGTTTGCATTGATACAGTTCATGTaGCATGGAGCAGCTACTATGGCATTCATATTTTTATGGCAATAT | + |
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Preference number: 6 (lower is better) Translates to: RSAMRVRRFALIQFM*HGAATMAFIFLWQY Trigger: ATATTGCCATAAAAATATGAATGCCATAGTAGCTGCTCCATGCAACATGAACTGTATCAATGCAAACCTTCTTACACGCATAGCTGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000141353.8 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CAA 72 bp | ATGCGTGTAAGAAGGTTTGCATTGATACAGTTCATGTaGCATGGAGCAGCTACTATGGCATTCATATTTTTA | + |
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Preference number: 6 (lower is better) Translates to: MRVRRFALIQFM*HGAATMAFIFL Trigger: TAAAAATATGAATGCCATAGTAGCTGCTCCATGCAACATGAACTGTATCAATGCAAACCTTCTTACACGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043356.13 ENSMUST00000093267.11 ENSMUST00000109532.9 ENSMUST00000141353.8 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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| CDS CCA 72 bp | AGTTTCCCAGTTGATGGTCTGAGGGATTCCAATCAATaGATAAAGAATCATATCCAATACCATTTGGTTATT | + |
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Preference number: 6 (lower is better) Translates to: SFPVDGLRDSNQ*IKNHIQYHLVI Trigger: AATAACCAAATGGTATTGGATATGATTCTTTATCCATTGATTGGAATCCCTCAGACCATCAACTGGGAAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043356.13 ENSMUST00000109532.9 ENSMUST00000131612.2 ENSMUST00000155903.8 ENSMUST00000180260.8 |
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