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Pregenerated sensors for SAMT2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059663

Ensembl transcript IDs: ENSMUST00000082357.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTACCTTTTTGGAAGCATaGTGGGCATTCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESTFLEA*WAFSFL
Trigger: GAGGAAGCTGAATGCCCAGCATGCTTCCAAAAAGGT...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR CCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTGTGGGAAGTCAAGGGTaGTGTTGCCATAGAGATCTA +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESVGSQG*CCHRDL
Trigger: TAGATCTCTATGGCAACACCACCCTTGACTTCCCAC...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR TCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTCTGAATCTCAGAGATTaGGGCTTTGAGTATGCTGAC +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESLNLRD*GFEYAD
Trigger: GTCAGCATACTCAAAGCCTCAATCTCTGAGATTCAG...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR TCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTGCATTCAGCTTCCTCTaGACTTTCAGTGACCTTATC +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESAFSFL*TFSDLI
Trigger: GATAAGGTCACTGAAAGTTCAGAGGAAGCTGAATGC...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR GCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTCCACTCCTTCACCCCTaGAAATCTTTTAGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESPLLHP*KSFSVE
Trigger: CTCAACACTAAAAGATTTGCAGGGGTGAAGGAGTGG...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR CCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTAACTGGAAAGTTTGGTaGGAAGTCAAGGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESNWKVW*EVKGGV
Trigger: AACACCACCCTTGACTTCCCACCAAACTTTCCAGTT...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR CCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTCTTAACTGGAAAGTTTaGTGGGAAGTCAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESLNWKV*WEVKGG
Trigger: ACCACCCTTGACTTCCCACCAAACTTTCCAGTTAAG...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR CCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTGGCGTCTTTCTTAACTaGAAAGTTTGGTGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESGVFLN*KVWWEV
Trigger: GACTTCCCACCAAACTTTCCAGTTAAGAAAGACGCC...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR CCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTTGTGATAAGCCCCATTaGAAACACATGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESCDKPH*KHMSAV
Trigger: CACAGCACTCATGTGTTTCCAATGGGGCTTATCACA...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR TCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTAATCACACCAAAGAGTaGCAGAGTGGTTGTGATAAG +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESNHTKE*QSGCDK
Trigger: CTTATCACAACCACTCTGTCACTCTTTGGTGTGATT...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR GCA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTCTGAAGATAATAGGCTaGAAAGAAAGCCAGTCACTC +
Preference number: 4 (lower is better)
Translates to: EKIITGVLWCVGNIVRESLKIIG*KESQSL
Trigger: GAGTGACTGGCTTTCTTTGCAGCCTATTATCTTCAG...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR CAA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTAGCTGGACAACATCATaGTCAAATTCCCAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: EKIITGVLWCVGNIVRESSWTTS*SNSQRR
Trigger: GCGCCTCTGGGAATTTGACAATGATGTTGTCCAGCT...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS TCA 90 bp ACAGGTTTTATCAGCATTGCCAGTAATATCAGGTTCCGTGCATATTaGAATTCAGGTGAAATTGTCCAGGTCGAGTTTATAGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: TGFISIASNIRFRAY*NSGEIVQVEFIGLC
Trigger: ACACAGCCCTATAAACTCGACCTGGACAATTTCACCTGAATTTCAATATGCACGGAACCTGATATTACTGGCAATGCTGATAAAACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS-3UTR CAA 90 bp GAGAAAATAATTACAGGAGTACTGTGGTGTGTAGGAAACATTGTCAGGGAGTCTGCCAGTATTTGCTGTTaGCAAGAATTATTCCAAACC +
Preference number: 5 (lower is better)
Translates to: EKIITGVLWCVGNIVRESASICC*QELFQT
Trigger: GGTTTGGAATAATTCTTGCAAACAGCAAATACTGGC...AGACTCCCTGACAATGTTTCCTACACACCACAGTACTCCTGTAATTATTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS GCA 72 bp AAAGCCAGTCACTCTGAAGATCCACTCCTTCACCCCTaGAAATCTTTTAGTGTTGAGGGTATAGCAATCCAT +
Preference number: 6 (lower is better)
Translates to: KASHSEDPLLHP*KSFSVEGIAIH
Trigger: ATGGATTGCTATACCCTCAACACTAAAAGATTTGCAGGGGTGAAGGAGTGGATCTTCAGAGTGACTGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS CCA 72 bp TTTAATCAAGGCGTCTTTCTTAACTGGAAAGTTTGGTaGGAAGTCAAGGGTGGTGTTGCCATAGAGATCTAC +
Preference number: 6 (lower is better)
Translates to: FNQGVFLNWKVW*EVKGGVAIEIY
Trigger: GTAGATCTCTATGGCAACACCACCCTTGACTTCCCACCAAACTTTCCAGTTAAGAAAGACGCCTTGATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS CAA 72 bp CATTGTCAAATTCCCAGAGGCGCCAGTATTTGCTGTTaGCAAGAATTATTCCAAACCCTGAAGATAATAGGC +
Preference number: 6 (lower is better)
Translates to: HCQIPRGASICC*QELFQTLKIIG
Trigger: GCCTATTATCTTCAGGGTTTGGAATAATTCTTGCAAACAGCAAATACTGGCGCCTCTGGGAATTTGACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS CAA 90 bp GGACAACATCATTGTCAAATTCCCAGAGGCGCCAGTATTTGCTGTTaGCAAGAATTATTCCAAACCCTGAAGATAATAGGCTGCAAAGAA +
Preference number: 6 (lower is better)
Translates to: GQHHCQIPRGASICC*QELFQTLKIIGCKE
Trigger: TTCTTTGCAGCCTATTATCTTCAGGGTTTGGAATAATTCTTGCAAACAGCAAATACTGGCGCCTCTGGGAATTTGACAATGATGTTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS GCA 72 bp CAACATCATTGTCAAATTCCCAGAGGCGCCAGTATTTaGTGTTTGCAAGAATTATTCCAAACCCTGAAGATA +
Preference number: 6 (lower is better)
Translates to: QHHCQIPRGASI*CLQELFQTLKI
Trigger: TATCTTCAGGGTTTGGAATAATTCTTGCAAACAGCAAATACTGGCGCCTCTGGGAATTTGACAATGATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2
CDS TCA 72 bp ATCAGCATTGCCAGTAATATCAGGTTCCGTGCATATTaGAATTCAGGTGAAATTGTCCAGGTCGAGTTTATA +
Preference number: 6 (lower is better)
Translates to: ISIASNIRFRAY*NSGEIVQVEFI
Trigger: TATAAACTCGACCTGGACAATTTCACCTGAATTTCAATATGCACGGAACCTGATATTACTGGCAATGCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082357.2