Pregenerated sensors for SAMT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072888Ensembl transcript IDs: ENSMUST00000101137.3
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGGAGTCTCCTGGCACATTTGGCAAACACAAGCATGCTCATTTATaGACCTGTCATCAGATTGTTTGGAAACATGCTGGGCATTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RESPGTFGKHKHAHL*TCHQIVWKHAGHSA Trigger: AGCTGAATGCCCAGCATGTTTCCAAACAATCTGATGACAGGTCCATAAATGAGCATGCTTGTGTTTGCCAAATGTGCCAGGAGACTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS TCA 90 bp | GGTTCCGTGCATATTGAAATTCAGGTGAAATTGTCCAGGTCGAGTTaGCAGGGCTGTGTACCAGAATTATGGTTTCAGTACCAGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: GSVHIEIQVKLSRSS*QGCVPELWFQYQRS Trigger: ACTTCTCTGGTACTGAAACCATAATTCTGGTACACAGCCCTGTCAACTCGACCTGGACAATTTCACCTGAATTTCAATATGCACGGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS CCA 90 bp | GGCAAACACAAGCATGCTCATTTATGGACCTGTCATCAGATTGTTTaGAAACATGCTGGGCATTCAGCTTCTTCTGAACTTTCAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: GKHKHAHLWTCHQIV*KHAGHSASSELSVT Trigger: GGTCACTGAAAGTTCAGAAGAAGCTGAATGCCCAGCATGTTTCCAAACAATCTGATGACAGGTCCATAAATGAGCATGCTTGTGTTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS TCA 90 bp | ACAGGTTTTATCAGCATTGCCAGTAATATCAGGTTCCGTGCATATTaGAATTCAGGTGAAATTGTCCAGGTCGAGTTGACAGGGCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: TGFISIASNIRFRAY*NSGEIVQVELTGLC Trigger: ACACAGCCCTGTCAACTCGACCTGGACAATTTCACCTGAATTTCAATATGCACGGAACCTGATATTACTGGCAATGCTGATAAAACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS TCA 90 bp | TTGTTTGGAAACATGCTGGGCATTCAGCTTCTTCTGAACTTTCAGTaGCCTTATCTCATAGAGGAACATAATCACACCAAAGAGCGACAG | + |
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Preference number: 5 (lower is better) Translates to: LFGNMLGIQLLLNFQ*PYLIEEHNHTKERQ Trigger: CTGTCGCTCTTTGGTGTGATTATGTTCCTCTATGAGATAAGGTCACTGAAAGTTCAGAAGAAGCTGAATGCCCAGCATGTTTCCAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS CCA 72 bp | CCTGGCACATTTGGCAAACACAAGCATGCTCATTTATaGACCTGTCATCAGATTGTTTGGAAACATGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PGTFGKHKHAHL*TCHQIVWKHAG Trigger: CCCAGCATGTTTCCAAACAATCTGATGACAGGTCCATAAATGAGCATGCTTGTGTTTGCCAAATGTGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS CAA 72 bp | AACACAAGCATGCTCATTTATGGACCTGTCATCAGATaGTTTGGAAACATGCTGGGCATTCAGCTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: NTSMLIYGPVIR*FGNMLGIQLLL Trigger: CAGAAGAAGCTGAATGCCCAGCATGTTTCCAAACAATCTGATGACAGGTCCATAAATGAGCATGCTTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS CAA 90 bp | CATTTGGCAAACACAAGCATGCTCATTTATGGACCTGTCATCAGATaGTTTGGAAACATGCTGGGCATTCAGCTTCTTCTGAACTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HLANTSMLIYGPVIR*FGNMLGIQLLLNFQ Trigger: CTGAAAGTTCAGAAGAAGCTGAATGCCCAGCATGTTTCCAAACAATCTGATGACAGGTCCATAAATGAGCATGCTTGTGTTTGCCAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS TCA 72 bp | CATATTGAAATTCAGGTGAAATTGTCCAGGTCGAGTTaGCAGGGCTGTGTACCAGAATTATGGTTTCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: HIEIQVKLSRSS*QGCVPELWFQY Trigger: GTACTGAAACCATAATTCTGGTACACAGCCCTGTCAACTCGACCTGGACAATTTCACCTGAATTTCAATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS TCA 72 bp | ATCAGCATTGCCAGTAATATCAGGTTCCGTGCATATTaGAATTCAGGTGAAATTGTCCAGGTCGAGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: ISIASNIRFRAY*NSGEIVQVELT Trigger: TGTCAACTCGACCTGGACAATTTCACCTGAATTTCAATATGCACGGAACCTGATATTACTGGCAATGCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS GCA 72 bp | AATGAAGCCAGTCACTCTGAAGATCCACTCCAATCCTaGAAATCTTTTAGTGTTGAGGGTATAGCAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: NEASHSEDPLQS*KSFSVEGIAIH Trigger: ATGGATTGCTATACCCTCAACACTAAAAGATTTGCAGGATTGGAGTGGATCTTCAGAGTGACTGGCTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS CAA 72 bp | TATTGTCAAATTCCCAGAGGCGCCAGTATTTGCTGTTaGCAAGAATTATTCCAAACCCCAAAGATAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: YCQIPRGASICC*QELFQTPKITG Trigger: GCCTGTTATCTTTGGGGTTTGGAATAATTCTTGCAAACAGCAAATACTGGCGCCTCTGGGAATTTGACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS GCA 72 bp | CAACATTATTGTCAAATTCCCAGAGGCGCCAGTATTTaGTGTTTGCAAGAATTATTCCAAACCCCAAAGATA | + |
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Preference number: 6 (lower is better) Translates to: QHYCQIPRGASI*CLQELFQTPKI Trigger: TATCTTTGGGGTTTGGAATAATTCTTGCAAACAGCAAATACTGGCGCCTCTGGGAATTTGACAATAATGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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| CDS CAA 72 bp | ACAACATTATTGTCAAATTCCCAGAGGCGCCAGTATTaGCTGTTTGCAAGAATTATTCCAAACCCCAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: TTLLSNSQRRQY*LFARIIPNPKD Trigger: ATCTTTGGGGTTTGGAATAATTCTTGCAAACAGCAAATACTGGCGCCTCTGGGAATTTGACAATAATGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101137.3 |
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