Pregenerated sensors for SAMM50 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022437Ensembl transcript IDs: ENSMUST00000023071.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTCCCAGGGAGGACAGGAGCTGGTCTGCATGAGACCATGGGGGTaGGGGGAGTCAGCAGACACCATGGAGCAGAGGTCCCAGGCACAT | + |
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Preference number: 1 (lower is better) Translates to: RSQGGQELVCMRPWG*GESADTMEQRSQAH Trigger: ATGTGCCTGGGACCTCTGCTCCATGGTGTCTGCTGACTCCCCCCACCCCCATGGTCTCATGCAGACCAGCTCCTGTCCTCCCTGGGACCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR GCA 90 bp | AGGCAGGAGCAGCCATGGCTATCAGCAGACAGCGCACTTCCCGTCTaGCTCGGAATCCTAGCATCATACCAGCACTGGCAGGTCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: RQEQPWLSADSALPV*LGILASYQHWQVLL Trigger: CAGCAGGACCTGCCAGTGCTGGTATGATGCTAGGATTCCGAGGCAGACGGGAAGTGCGCTGTCTGCTGATAGCCATGGCTGCTCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR GCA 90 bp | CACAGCTGGAGCAAGAAAGGAGCAGGGCGCAGGCAGAGCTGGGTGTaGTCACCAGCTAGCCTTGAAATGCAGCTATCGGGTCCATCTGGG | + |
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Preference number: 1 (lower is better) Translates to: HSWSKKGAGRRQSWV*SPASLEMQLSGPSG Trigger: CCCAGATGGACCCGATAGCTGCATTTCAAGGCTAGCTGGTGAGCACACCCAGCTCTGCCTGCGCCCTGCTCCTTTCTTGCTCCAGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR CCA 90 bp | AACCCCCATGCCCCAGTGACCACTGCGATGGTGCAGGACGGAGCCTaGGAGACCAGAGCCTCAAAGGGCTTTCCACGGAGATCAGAAATG | + |
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Preference number: 1 (lower is better) Translates to: NPHAPVTTAMVQDGA*ETRASKGFPRRSEM Trigger: CATTTCTGATCTCCGTGGAAAGCCCTTTGAGGCTCTGGTCTCCCAGGCTCCGTCCTGCACCATCGCAGTGGTCACTGGGGCATGGGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR TCA 90 bp | AGGCAAGCTCGAGACAGAAAGCTAAGAGTGAAGGCTGGCAGCTCCTaGGTGGCTTTGGACCATACACTGGGGGATGGGCACCACCACCAC | + |
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Preference number: 1 (lower is better) Translates to: RQARDRKLRVKAGSS*VALDHTLGDGHHHH Trigger: GTGGTGGTGGTGCCCATCCCCCAGTGTATGGTCCAAAGCCACTCAGGAGCTGCCAGCCTTCACTCTTAGCTTTCTGTCTCGAGCTTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR TCA 90 bp | TCAGCATTGAAAGACTGGGATCACTTAAGAACCCCCATGCCCCAGTaGCCACTGCGATGGTGCAGGACGGAGCCTGGGAGACCAGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: SALKDWDHLRTPMPQ*PLRWCRTEPGRPEP Trigger: AGGCTCTGGTCTCCCAGGCTCCGTCCTGCACCATCGCAGTGGTCACTGGGGCATGGGGGTTCTTAAGTGATCCCAGTCTTTCAATGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR GCA 90 bp | TGCCAGCTCCGAAGAGAGAGCACAGAGGTCTTTAGCAGTCAGTCTTaGCCAGCAGCACCTGAGCCTATGGCCCACTGGACATCGCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: CQLRRESTEVFSSQS*PAAPEPMAHWTSQV Trigger: AACCTGCGATGTCCAGTGGGCCATAGGCTCAGGTGCTGCTGGGCAAGACTGACTGCTAAAGACCTCTGTGCTCTCTCTTCGGAGCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR CCA 90 bp | CGGAGCTCTGGGCTCCATCCCCAGCATTGTGTAAATCCAACATGGTaGTACATGCCTGGAATGCCAGCACTTGGGAGGGGAAGGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: RSSGLHPQHCVNPTW*YMPGMPALGRGRQE Trigger: CTCCTGCCTTCCCCTCCCAAGTGCTGGCATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGATGGAGCCCAGAGCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR CCA 90 bp | CAAACAGCCTTGCTCAGGACGCCAGCACACTCCAAGCAAGGAATCTaGTGTCCTTGTAGAACAGGCAGGCTGGCTACCAGACTGCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: QTALLRTPAHSKQGI*CPCRTGRLATRLLP Trigger: AGGGAGCAGTCTGGTAGCCAGCCTGCCTGTTCTACAAGGACACCAGATTCCTTGCTTGGAGTGTGCTGGCGTCCTGAGCAAGGCTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR GCA 90 bp | AGGCTCTTCCCTCAGTATCAAGGTAAGGTTCCGGACAAACAGCCTTaGTCAGGACGCCAGCACACTCCAAGCAAGGAATCTGGTGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: RLFPQYQGKVPDKQP*SGRQHTPSKESGVL Trigger: AAGGACACCAGATTCCTTGCTTGGAGTGTGCTGGCGTCCTGAGCAAGGCTGTTTGTCCGGAACCTTACCTTGATACTGAGGGAAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR CCA 90 bp | CTGGGTAAGACCTTTGCCTCCTGCCTGCAAAGCAATCCTGAAACATaGTATCTGACAGCCCTGCGTATCTGCGGATACCAGCATCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: LGKTFASCLQSNPET*YLTALRICGYQHPS Trigger: GCTTGGATGCTGGTATCCGCAGATACGCAGGGCTGTCAGATACCATGTTTCAGGATTGCTTTGCAGGCAGGAGGCAAAGGTCTTACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR GCA 90 bp | GACTTTCACAAGTGCCTTCCCTGGGTTCTCAAAGGTCATGGAGTCTaGAAATCTGTGTCAGTTTCTGCAGCTCCCAATCCCCATTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: DFHKCLPWVLKGHGV*KSVSVSAAPNPHSE Trigger: TTCAGAATGGGGATTGGGAGCTGCAGAAACTGACACAGATTTGCAGACTCCATGACCTTTGAGAACCCAGGGAAGGCACTTGTGAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR TCA 90 bp | CAACAATTTTTAACTCCAATTCTGGGGAATCCAATACCCTCTTTCTaGCCTCCACAGGCACAGGGTACCCATGTGGTATACATATATACA | + |
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Preference number: 1 (lower is better) Translates to: QQFLTPILGNPIPSF*PPQAQGTHVVYIYT Trigger: TGTATATATGTATACCACATGGGTACCCTGTGCCTGTGGAGGTCAGAAAGAGGGTATTGGATTCCCCAGAATTGGAGTTAAAAATTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR GCA 90 bp | TCTGAACACCAGGTCCTTAGTGGGTTCCAATCATCAATGAGTAACTaGAGACTGACATTTCCAACCATTGAAAGGAGTAATTTATTCTCA | + |
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Preference number: 1 (lower is better) Translates to: SEHQVLSGFQSSMSN*RLTFPTIERSNLFS Trigger: TGAGAATAAATTACTCCTTTCAATGGTTGGAAATGTCAGTCTGCAGTTACTCATTGATGATTGGAACCCACTAAGGACCTGGTGTTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCGGATACCAGCATCCAAGCAGGGGACAGGAGTGGCTTCCAACAGACCCCCTTGCCCAGCAGCACCTaGGCCTATGGCCCACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SADTSIQAGDRSGFQQTPLPSST*AYGPLD Trigger: GTCCAGTGGGCCATAGGCTCAGGTGCTGCTGGGCAA...GGGGGTCTGTTGGAAGCCACTCCTGTCCCCTGCTTGGATGCTGGTATCCGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAAAGGTCCCAGGGAGGACAGGAGCTGGTCTGCATGAGACCATGGGGGTGGTCCCAGCTCTCAGCCTaGCAGAGGGACAGCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: NKRSQGGQELVCMRPWGWSQLSA*QRDSTQ Trigger: CTGAGTGCTGTCCCTCTGCCAGGCTGAGAGCTGGGA...CCACCCCCATGGTCTCATGCAGACCAGCTCCTGTCCTCCCTGGGACCTTTTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGGGGGATGGGCACCACCACCACAACACAGGCTCTTCCCTCAGTATCAAGGAGCACTGGCAGGTCCTaGTGCACTGAGGTGGTAACC | + |
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Preference number: 2 (lower is better) Translates to: HWGMGTTTTTQALPSVSRSTGRS*CTEVVT Trigger: GGTTACCACCTCAGTGCAGCAGGACCTGCCAGTGCT...CCTTGATACTGAGGGAAGAGCCTGTGTTGTGGTGGTGGTGCCCATCCCCCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGACGGAGCCTGGGAGACCAGAGCCTCAAAGGGCTTTCCACGGAGATCAGAACCTGACCTTCCACCTTaGCCCACCTCCTTCACCCAA | + |
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Preference number: 2 (lower is better) Translates to: QDGAWETRASKGFPRRSEPDLPP*PTSFTQ Trigger: TTGGGTGAAGGAGGTGGGGCAAGGTGGAAGGTCAGG...TTCTGATCTCCGTGGAAAGCCCTTTGAGGCTCTGGTCTCCCAGGCTCCGTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCCGGACAAACAGCCTTGCTCAGGACGCCAGCACACTCCAAGCAAGGAATCCCTGAGTCACAAGCATaGCAGGCAGGAGCAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GSGQTALLRTPAHSKQGIPESQA*QAGAAM Trigger: CATGGCTGCTCCTGCCTGTCATGCTTGTGACTCAGG...GATTCCTTGCTTGGAGTGTGCTGGCGTCCTGAGCAAGGCTGTTTGTCCGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGACGGAGCCTGGGAGACCAGAGCCTCAAAGGGCTTTCCACGGAGATCAGAACAGCACATGAGGAGCTaGGGACCCCTGAGAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: QDGAWETRASKGFPRRSEQHMRS*GPLRVQ Trigger: TTGAACTCTCAGGGGTCCTCAGCTCCTCATGTGCTG...TTCTGATCTCCGTGGAAAGCCCTTTGAGGCTCTGGTCTCCCAGGCTCCGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAAAGGTCCCAGGGAGGACAGGAGCTGGTCTGCATGAGACCATGGGGGTGGGCCTCAGTTGTTGAGTaGTCACCCATCAGGCACGGA | + |
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Preference number: 2 (lower is better) Translates to: NKRSQGGQELVCMRPWGWASVVE*SPIRHG Trigger: TCCGTGCCTGATGGGTGAGCACTCAACAACTGAGGC...CCACCCCCATGGTCTCATGCAGACCAGCTCCTGTCCTCCCTGGGACCTTTTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGGGGGATGGGCACCACCACCACAACACAGGCTCTTCCCTCAGTATCAAGGAGACTCCCAGGCAACTaGTTCTGGTCTGTCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: HWGMGTTTTTQALPSVSRRLPGN*FWSVHH Trigger: GTGGTGGACAGACCAGAACCAGTTGCCTGGGAGTCT...CCTTGATACTGAGGGAAGAGCCTGTGTTGTGGTGGTGGTGCCCATCCCCCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCCGGACAAACAGCCTTGCTCAGGACGCCAGCACACTCCAAGCAAGGAATCGGAAGGCAGGAGGATTaGATCAAGGTCACCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GSGQTALLRTPAHSKQGIGRQED*IKVTLG Trigger: GCCAAGGGTGACCTTGATCCAATCCTCCTGCCTTCC...GATTCCTTGCTTGGAGTGTGCTGGCGTCCTGAGCAAGGCTGTTTGTCCGGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTCTCAAAGGTCATGGAGTCTGCAAATCTGTGTCAGTTTCTGCAGCTCCCAGGAGCTGAGGACCCCTaGGAGTTCAAGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GFSKVMESANLCQFLQLPGAEDP*EFKASL Trigger: CAGGCTGGCCTTGAACTCTCAGGGGTCCTCAGCTCC...TGGGAGCTGCAGAAACTGACACAGATTTGCAGACTCCATGACCTTTGAGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGACGGAGCCTGGGAGACCAGAGCCTCAAAGGGCTTTCCACGGAGATCAGAATTGGAGCCTGGGAGATaGCTGTTTCTCATCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: QDGAWETRASKGFPRRSELEPGR*LFLIQA Trigger: AGCTTGGATGAGAAACAGGCATCTCCCAGGCTCCAA...TTCTGATCTCCGTGGAAAGCCCTTTGAGGCTCTGGTCTCCCAGGCTCCGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATTGAAAGACTGGGATCACTTAAGAACCCCCATGCCCCAGTGACCACTGCGAGGCAGGAGCAGCCATaGCTATCAGCAGACAGCGCA | + |
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Preference number: 2 (lower is better) Translates to: SIERLGSLKNPHAPVTTARQEQP*LSADSA Trigger: TGCGCTGTCTGCTGATAGCCATGGCTGCTCCTGCCT...CGCAGTGGTCACTGGGGCATGGGGGTTCTTAAGTGATCCCAGTCTTTCAATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGCTGTTCCCCAAGCCCCAATGGAATGCCAGCACTTaGGAGGGGAAGGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCVCRLFPKPQWNAST*EGKAGG Trigger: TCCTCCTGCCTTCCCCTCCCAAGTGCTGGCATTCCA...TTGGGGCTTGGGGAACAGCCTACACACACACACACACACACACACACACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR TCA 90 bp | AACAAAAGGTCCCAGGGAGGACAGGAGCTGGTCTGCATGAGACCATGGGGGTGGCCTGCAAAGCAATCCTaGAACATGGTATCTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: NKRSQGGQELVCMRPWGWPAKQS*NMVSDS Trigger: GCTGTCAGATACCATGTTTCAGGATTGCTTTGCAGG...CCACCCCCATGGTCTCATGCAGACCAGCTCCTGTCCTCCCTGGGACCTTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGCTCCTGAGTGGCTTTGGACCATACACTGGGGGATGGGCACCACCACCACATGCTGAGGGGAAATaGAGCATTAAGCTGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: WQLLSGFGPYTGGWAPPPHAEGK*SIKLQR Trigger: TCTTTGCAGCTTAATGCTTCATTTCCCCTCAGCATG...TGGTGGTGGTGCCCATCCCCCAGTGTATGGTCCAAAGCCACTCAGGAGCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | ACGGAGATCAGAAATGAGGCAAGCTCGAGACAGAAAGCTAAGAGTGAAGGCTGGGGCAGAAGTCTGGCCTaGCAGCTCCGAAGAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: TEIRNEASSRQKAKSEGWGRSLA*QLRRES Trigger: GCTCTCTCTTCGGAGCTGGCAGGCCAGACTTCTGCC...CCAGCCTTCACTCTTAGCTTTCTGTCTCGAGCTTGCCTCATTTCTGATCTCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGCTGTTCCCCAAGCCCCAAGACAGCACTCAGGAGTaGCTAGGGATGTGCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCVCRLFPKPQDSTQE*LGMCLS Trigger: ACTGAGGCACATCCCTAGCCACTCCTGAGTGCTGTC...TTGGGGCTTGGGGAACAGCCTACACACACACACACACACACACACACACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGCAAATCTGTGTCAGTTTCTGCAGCTCCCAATCCCCATTCTGAACACCATGAGACCATGGGGGTaGGGGGAGTCAGCAGACACC | + |
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Preference number: 2 (lower is better) Translates to: ESANLCQFLQLPIPILNTMRPWG*GESADT Trigger: GGTGTCTGCTGACTCCCCCCACCCCCATGGTCTCAT...GGTGTTCAGAATGGGGATTGGGAGCTGCAGAAACTGACACAGATTTGCAGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAGGGCTTTCCACGGAGATCAGAAATGAGGCAAGCTCGAGACAGAAAGCTAGTCAGCAGACACCATaGAGCAGAGGTCCCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LKGLSTEIRNEASSRQKASQQTP*SRGPRH Trigger: GTGCCTGGGACCTCTGCTCCATGGTGTCTGCTGACT...AGCTTTCTGTCTCGAGCTTGCCTCATTTCTGATCTCCGTGGAAAGCCCTTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | ACGGAGATCAGAAATGAGGCAAGCTCGAGACAGAAAGCTAAGAGTGAAGGCTGGAGGCAGAGCTGGGTGTaGTCACCAGCTAGCCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: TEIRNEASSRQKAKSEGWRQSWV*SPASLE Trigger: TTCAAGGCTAGCTGGTGAGCACACCCAGCTCTGCCT...CCAGCCTTCACTCTTAGCTTTCTGTCTCGAGCTTGCCTCATTTCTGATCTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTGCAAATCTGTGTCAGTTTCTGCAGCTCCCAATCCCCATTCTGAACACCGGTACATGCCTGGAATaGCAGCACTTGGGAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ESANLCQFLQLPIPILNTGTCLE*QHLGGE Trigger: TTCCCCTCCCAAGTGCTGGCATTCCAGGCATGTACC...GGTGTTCAGAATGGGGATTGGGAGCTGCAGAAACTGACACAGATTTGCAGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGGGGGATGGGCACCACCACCACAACACAGGCTCTTCCCTCAGTATCAAGGTCATCAATGAGTAACTaGAGACTGACATTTCCAACC | + |
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Preference number: 2 (lower is better) Translates to: HWGMGTTTTTQALPSVSRSSMSN*RLTFPT Trigger: GGTTGGAAATGTCAGTCTGCAGTTACTCATTGATGA...CCTTGATACTGAGGGAAGAGCCTGTGTTGTGGTGGTGGTGCCCATCCCCCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCCAGTCTTGATTAAAACCAGACTTTCACAAGTGCCTTCCCTGGGTTCTTCACAACCACACAGCTaGAGCAAGAAAGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GSPVLIKTRLSQVPSLGSSQPHS*SKKGAG Trigger: CCCTGCTCCTTTCTTGCTCCAGCTGTGTGGTTGTGA...AGAACCCAGGGAAGGCACTTGTGAAAGTCTGGTTTTAATCAAGACTGGGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGCAAATCTGTGTCAGTTTCTGCAGCTCCCAATCCCCATTCTGAACACCAGTTCAAGGCCAGCCTaGGTAAGACCTTTGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ESANLCQFLQLPIPILNTSSRPA*VRPLPP Trigger: AGGAGGCAAAGGTCTTACCCAGGCTGGCCTTGAACT...GGTGTTCAGAATGGGGATTGGGAGCTGCAGAAACTGACACAGATTTGCAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATTGAAAGACTGGGATCACTTAAGAACCCCCATGCCCCAGTGACCACTGCGCTGCCTAGATCTTTCTaGATGCTGAGGGGAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: SIERLGSLKNPHAPVTTALPRSF*MLRGNE Trigger: TTCATTTCCCCTCAGCATGCAGAAAGATCTAGGCAG...CGCAGTGGTCACTGGGGCATGGGGGTTCTTAAGTGATCCCAGTCTTTCAATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATTGAAAGACTGGGATCACTTAAGAACCCCCATGCCCCAGTGACCACTGCGCTCAAACTCTGTCTCTaGCTAGATCTTTCTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: SIERLGSLKNPHAPVTTALKLCL*LDLSAC Trigger: GCATGCAGAAAGATCTAGGCAGAGACAGAGTTTGAG...CGCAGTGGTCACTGGGGCATGGGGGTTCTTAAGTGATCCCAGTCTTTCAATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCTCAAAGGTCATGGAGTCTGCAAATCTGTGTCAGTTTCTGCAGCTCCCACCTTTGCCTCCTGCCTaGAAAGCAATCCTGAAACAT | + |
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Preference number: 2 (lower is better) Translates to: GFSKVMESANLCQFLQLPPLPPA*KAILKH Trigger: ATGTTTCAGGATTGCTTTGCAGGCAGGAGGCAAAGG...TGGGAGCTGCAGAAACTGACACAGATTTGCAGACTCCATGACCTTTGAGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATTGAAAGACTGGGATCACTTAAGAACCCCCATGCCCCAGTGACCACTGCGAATGAAGCATTAAGCTaGAAAGAATCTGGGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: SIERLGSLKNPHAPVTTANEALS*KESGPR Trigger: CCTTGGCCCAGATTCTTTGCAGCTTAATGCTTCATT...CGCAGTGGTCACTGGGGCATGGGGGTTCTTAAGTGATCCCAGTCTTTCAATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAAATTATCCCCTAAGTACCACTTACAGAGACCTCCATCAGAATAGACAGGCAGAGGCAGAAGTCTaGCCTGCCAGCTCCGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TENYPLSTTYRDLHQNRQAEAEV*PASSEE Trigger: CTCTTCGGAGCTGGCAGGCCAGACTTCTGCCTCTGC...CTGTCTATTCTGATGGAGGTCTCTGTAAGTGGTACTTAGGGGATAATTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGAGATCAGAAATGAGGCAAGCTCGAGACAGAAAGCTAAGAGTGAAGGCTGGAGCAATCCTGAAACATaGTATCTGACAGCCCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: TEIRNEASSRQKAKSEGWSNPET*YLTALR Trigger: ACGCAGGGCTGTCAGATACCATGTTTCAGGATTGCT...CCAGCCTTCACTCTTAGCTTTCTGTCTCGAGCTTGCCTCATTTCTGATCTCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGAGATCAGAAATGAGGCAAGCTCGAGACAGAAAGCTAAGAGTGAAGGCTGGCCAGCATCCACAGGGTaGCCCACAACAATTTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: TEIRNEASSRQKAKSEGWPASTG*PTTIFN Trigger: GTTAAAAATTGTTGTGGGCCACCCTGTGGATGCTGG...CCAGCCTTCACTCTTAGCTTTCTGTCTCGAGCTTGCCTCATTTCTGATCTCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCCAGCATTGTGTAAATCCAACATGGTGGTACATGCCTGGAATGCCAGCACTGTCCATAAAGACGCATaGCCTGAAAAACAGACCACA | + |
|
Preference number: 2 (lower is better) Translates to: SPALCKSNMVVHAWNASTVHKDA*PEKQTT Trigger: TGTGGTCTGTTTTTCAGGCCATGCGTCTTTATGGAC...AGTGCTGGCATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAAAATTATCCCCTAAGTACCACTTACAGAGACCTCCATCAGAATAGACAGGATCAAGGTCACCCTTaGCTACAAAGTAAAACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TENYPLSTTYRDLHQNRQDQGHP*LQSKTH Trigger: GTGGGTTTTACTTTGTAGCCAAGGGTGACCTTGATC...CTGTCTATTCTGATGGAGGTCTCTGTAAGTGGTACTTAGGGGATAATTTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | GGAGGACAGGAGCTGGTCTGCATGAGACCATGGGGGTaGGGGGAGTCAGCAGACACCATGGAGCAGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GGQELVCMRPWG*GESADTMEQRS Trigger: GGACCTCTGCTCCATGGTGTCTGCTGACTCCCCCCACCCCCATGGTCTCATGCAGACCAGCTCCTGTCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | GCCCCAGTGACCACTGCGATGGTGCAGGACGGAGCCTaGGAGACCAGAGCCTCAAAGGGCTTTCCACGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: APVTTAMVQDGA*ETRASKGFPRR Trigger: TCTCCGTGGAAAGCCCTTTGAGGCTCTGGTCTCCCAGGCTCCGTCCTGCACCATCGCAGTGGTCACTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR GCA 72 bp | CCGTGTGCACATGCCCGGCATCACTCTGATGTGGTGTaGACACGGGTGACCCCAGCACATGAGGAGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PCAHARHHSDVV*TRVTPAHEELR Trigger: CCTCAGCTCCTCATGTGCTGGGGTCACCCGTGTGCACACCACATCAGAGTGATGCCGGGCATGTGCACACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | AACATCCCCTTAGGCGCCACCTCCCAGCTCTCAGCCTaGCAGAGGGACAGCACTCAGGAGTGGCTAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: NIPLGATSQLSA*QRDSTQEWLGM Trigger: CATCCCTAGCCACTCCTGAGTGCTGTCCCTCTGCCAGGCTGAGAGCTGGGAGGTGGCGCCTAAGGGGATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCGGACAAACAGCCTTGCTCAGGACGCCAGCACACTCCAAGCAAGGAATCCTGGAATGCCAGCACTaGGGAGGGGAAGGCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSGQTALLRTPAHSKQGILECQH*GGEGRR Trigger: CCTCCTGCCTTCCCCTCCCAAGTGCTGGCATTCCAG...GATTCCTTGCTTGGAGTGTGCTGGCGTCCTGAGCAAGGCTGTTTGTCCGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | AGCCTGAGTCACAAGCATGACAGGCAGGAGCAGCCATaGCTATCAGCAGACAGCGCACTTCCCGTCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSHKHDRQEQP*LSADSALPVCL Trigger: GAGGCAGACGGGAAGTGCGCTGTCTGCTGATAGCCATGGCTGCTCCTGCCTGTCATGCTTGTGACTCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR TCA 72 bp | AAAGACTGGGATCACTTAAGAACCCCCATGCCCCAGTaGCCACTGCGATGGTGCAGGACGGAGCCTGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KDWDHLRTPMPQ*PLRWCRTEPGR Trigger: TCTCCCAGGCTCCGTCCTGCACCATCGCAGTGGTCACTGGGGCATGGGGGTTCTTAAGTGATCCCAGTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR GCA 72 bp | CAGCCATGGCTATCAGCAGACAGCGCACTTCCCGTCTaGCTCGGAATCCTAGCATCATACCAGCACTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QPWLSADSALPV*LGILASYQHWQ Trigger: CTGCCAGTGCTGGTATGATGCTAGGATTCCGAGGCAGACGGGAAGTGCGCTGTCTGCTGATAGCCATGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR GCA 72 bp | AGCAAGAAAGGAGCAGGGCGCAGGCAGAGCTGGGTGTaGTCACCAGCTAGCCTTGAAATGCAGCTATCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SKKGAGRRQSWV*SPASLEMQLSG Trigger: ACCCGATAGCTGCATTTCAAGGCTAGCTGGTGAGCACACCCAGCTCTGCCTGCGCCCTGCTCCTTTCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR GCA 72 bp | GCTGCAAAGAATCTGGGCCAAGGCCGACTCAGGAGTTaGCTGCCCTCCTCAGCTTTCTACCCAAGCTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: AAKNLGQGRLRS*LPSSAFYPSSL Trigger: TAGGGAGCTTGGGTAGAAAGCTGAGGAGGGCAGGCAACTCCTGAGTCGGCCTTGGCCCAGATTCTTTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | AGCTGGAGCAAGAAAGGAGCAGGGCGCAGGCAGAGCTaGGTGTGCTCACCAGCTAGCCTTGAAATGCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SWSKKGAGRRQS*VCSPASLEMQL Trigger: TAGCTGCATTTCAAGGCTAGCTGGTGAGCACACCCAGCTCTGCCTGCGCCCTGCTCCTTTCTTGCTCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACACTCCAAGCAAGGAATCTGGTGTCCTTGTAGAACAGGCAGGCTGGCTACCGGGAAGGCAGGAGGATaGGATCAAGGTCACCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: AHSKQGIWCPCRTGRLATGKAGG*DQGHPW Trigger: CCAAGGGTGACCTTGATCCAATCCTCCTGCCTTCCC...GGTAGCCAGCCTGCCTGTTCTACAAGGACACCAGATTCCTTGCTTGGAGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR TCA 72 bp | CACCTCCTTCACCCAAGAGCAGCCTACAGGGAAGCCTaGAAAATCAAACAGGTCGGGCCACGCTGGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: HLLHPRAAYREA*KIKQVGPRWRQ Trigger: CTGTCTCCAGCGTGGCCCGACCTGTTTGATTTTTCAGGCTTCCCTGTAGGCTGCTCTTGGGTGAAGGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR TCA 72 bp | CGAGACAGAAAGCTAAGAGTGAAGGCTGGCAGCTCCTaGGTGGCTTTGGACCATACACTGGGGGATGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RDRKLRVKAGSS*VALDHTLGDGH Trigger: GTGCCCATCCCCCAGTGTATGGTCCAAAGCCACTCAGGAGCTGCCAGCCTTCACTCTTAGCTTTCTGTCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR GCA 72 bp | CGAAGAGAGAGCACAGAGGTCTTTAGCAGTCAGTCTTaGCCAGCAGCACCTGAGCCTATGGCCCACTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: RRESTEVFSSQS*PAAPEPMAHWT Trigger: TGTCCAGTGGGCCATAGGCTCAGGTGCTGCTGGGCAAGACTGACTGCTAAAGACCTCTGTGCTCTCTCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | CACTCAACCGTGTCACCTCCAAATAGGCTTGGAGCCTaGGAGATGCCTGTTTCTCATCCAAGCTGCCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HSTVSPPNRLGA*EMPVSHPSCPW Trigger: CCAGGGGCAGCTTGGATGAGAAACAGGCATCTCCCAGGCTCCAAGCCTATTTGGAGGTGACACGGTTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR GCA 72 bp | GGCAGAGCTGGGTGTGCTCACCAGCTAGCCTTGAAATaGAGCTATCGGGTCCATCTGGGACCTCATGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: GRAGCAHQLALK*SYRVHLGPHVT Trigger: TGTAACATGAGGTCCCAGATGGACCCGATAGCTGCATTTCAAGGCTAGCTGGTGAGCACACCCAGCTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | GGGCTCCATCCCCAGCATTGTGTAAATCCAACATGGTaGTACATGCCTGGAATGCCAGCACTTGGGAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GLHPQHCVNPTW*YMPGMPALGRG Trigger: TCCCCTCCCAAGTGCTGGCATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGATGGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | TTGCTCAGGACGCCAGCACACTCCAAGCAAGGAATCTaGTGTCCTTGTAGAACAGGCAGGCTGGCTACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLRTPAHSKQGI*CPCRTGRLATR Trigger: TCTGGTAGCCAGCCTGCCTGTTCTACAAGGACACCAGATTCCTTGCTTGGAGTGTGCTGGCGTCCTGAGCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | GAGGCAAGCTCGAGACAGAAAGCTAAGAGTGAAGGCTaGCAGCTCCTGAGTGGCTTTGGACCATACACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EASSRQKAKSEG*QLLSGFGPYTG Trigger: CCCAGTGTATGGTCCAAAGCCACTCAGGAGCTGCCAGCCTTCACTCTTAGCTTTCTGTCTCGAGCTTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCAGCATTGTGTAAATCCAACATGGTGGTACATGCCTGGAATGCCAGCACTCACCTCCAAATAGGCTaGGAGCCTGGGAGATGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPALCKSNMVVHAWNASTHLQIG*EPGRCL Trigger: CAGGCATCTCCCAGGCTCCAAGCCTATTTGGAGGTG...AGTGCTGGCATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR TCA 72 bp | CCTCCTGCCTGCAAAGCAATCCTGAAACATGGTATCTaGCAGCCCTGCGTATCTGCGGATACCAGCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PPACKAILKHGI*QPCVSADTSIQ Trigger: TTGGATGCTGGTATCCGCAGATACGCAGGGCTGTCAGATACCATGTTTCAGGATTGCTTTGCAGGCAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR GCA 72 bp | CCTCAGTATCAAGGTAAGGTTCCGGACAAACAGCCTTaGTCAGGACGCCAGCACACTCCAAGCAAGGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: PQYQGKVPDKQP*SGRQHTPSKES Trigger: AGATTCCTTGCTTGGAGTGTGCTGGCGTCCTGAGCAAGGCTGTTTGTCCGGAACCTTACCTTGATACTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | ACCTTTGCCTCCTGCCTGCAAAGCAATCCTGAAACATaGTATCTGACAGCCCTGCGTATCTGCGGATACCAG | + |
|
Preference number: 3 (lower is better) Translates to: TFASCLQSNPET*YLTALRICGYQ Trigger: CTGGTATCCGCAGATACGCAGGGCTGTCAGATACCATGTTTCAGGATTGCTTTGCAGGCAGGAGGCAAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | AGCAAGGAATCTGGTGTCCTTGTAGAACAGGCAGGCTaGCTACCAGACTGCTCCCTTACAGAGTGGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SKESGVLVEQAG*LPDCSLTEWSK Trigger: TTTGCTCCACTCTGTAAGGGAGCAGTCTGGTAGCCAGCCTGCCTGTTCTACAAGGACACCAGATTCCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR GCA 72 bp | AAGTGCCTTCCCTGGGTTCTCAAAGGTCATGGAGTCTaGAAATCTGTGTCAGTTTCTGCAGCTCCCAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: KCLPWVLKGHGV*KSVSVSAAPNP Trigger: GGGATTGGGAGCTGCAGAAACTGACACAGATTTGCAGACTCCATGACCTTTGAGAACCCAGGGAAGGCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | ATGTCCTCAGGAAAAGCATGTGTCCATAAAGACGCATaGCCTGAAAAACAGACCACATCCAGGACACCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MSSGKACVHKDA*PEKQTTSRTPL Trigger: CAGCGGTGTCCTGGATGTGGTCTGTTTTTCAGGCCATGCGTCTTTATGGACACATGCTTTTCCTGAGGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CCA 72 bp | GAGGGGAAGGCAGGAGGATTGGATCAAGGTCACCCTTaGCTACAAAGTAAAACCCACAACAACTGTGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: EGKAGGLDQGHP*LQSKTHNNCVY Trigger: ATAGACACAGTTGTTGTGGGTTTTACTTTGTAGCCAAGGGTGACCTTGATCCAATCCTCCTGCCTTCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CAA 72 bp | CAGCACTCAGGAGTGGCTAGGGATGTGCCTCAGTTGTaGAGTGCTCACCCATCAGGCACGGAGCTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHSGVARDVPQL*SAHPSGTELWA Trigger: AGCCCAGAGCTCCGTGCCTGATGGGTGAGCACTCAACAACTGAGGCACATCCCTAGCCACTCCTGAGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR CCA 90 bp | AGAAGTCACCTGAAAGCCCTTAGGCCCAGGACAGCACAGGTCAGACTGTCACATTGGCCGGAAGGGCAGTaGGGTGTAGAGGTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSHLKALRPRTAQVRLSHWPEGQ*GVEVQA Trigger: GGCCTGCACCTCTACACCCCACTGCCCTTCCGGCCA...ATGTGACAGTCTGACCTGTGCTGTCCTGGGCCTAAGGGCTTTCAGGTGACTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR CCA 90 bp | AGCATTGAAAGACTGGGATCACTTAAGAACCCCCATGCCCCAGTGACCACTGCGTCTCCGAAGCCACCCTaGCCTGGCCGGAAGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIERLGSLKNPHAPVTTASPKPP*PGRKGS Trigger: ACTGCCCTTCCGGCCAGGCCAGGGTGGCTTCGGAGA...CGCAGTGGTCACTGGGGCATGGGGGTTCTTAAGTGATCCCAGTCTTTCAATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCTCCTGAGTGGCTTTGGACCATACACTGGGGGATGGGCACCACCACCATTTTCCCGGGCTTCATaGGATCGCCGCATTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WQLLSGFGPYTGGWAPPPFSRAS*DRRITS Trigger: TGAGGTAATGCGGCGATCTCATGAAGCCCGGGAAAA...TGGTGGTGGTGCCCATCCCCCAGTGTATGGTCCAAAGCCACTCAGGAGCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR GCA 90 bp | CAGGACGGAGCCTGGGAGACCAGAGCCTCAAAGGGCTTTCCACGGAGATCAGAACATAGGACCAGCGGATaGACTCAGCTAGCTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDGAWETRASKGFPRRSEHRTSG*TQLASG Trigger: TCCGGAAGCTAGCTGAGTGCATCCGCTGGTCCTATG...TTCTGATCTCCGTGGAAAGCCCTTTGAGGCTCTGGTCTCCCAGGCTCCGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTCTCAAAGGTCATGGAGTCTGCAAATCTGTGTCAGTTTCTGCAGCTCCCAGAAGCCACCCTGGCCTaGCCGGAAGGGCAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSKVMESANLCQFLQLPEATLA*PEGQWG Trigger: ACCCCACTGCCCTTCCGGCCAGGCCAGGGTGGCTTC...TGGGAGCTGCAGAAACTGACACAGATTTGCAGACTCCATGACCTTTGAGAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAAGGTCCCAGGGAGGACAGGAGCTGGTCTGCATGAGACCATGGGGGTGGACCTGTCAGCAATGCTaGATGGCTTGTCACCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: NKRSQGGQELVCMRPWGWTCQQC*MACHRW Trigger: CCATCGGTGACAAGCCATCCAGCATTGCTGACAGGT...CCACCCCCATGGTCTCATGCAGACCAGCTCCTGTCCTCCCTGGGACCTTTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR GCA 90 bp | GCACACTCCAAGCAAGGAATCTGGTGTCCTTGTAGAACAGGCAGGCTGGCTACCGGCTTCCTCCCCCAGTaGTCCAAAGTCAGTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AHSKQGIWCPCRTGRLATGFLPQ*SKVSST Trigger: AGTGGAACTGACTTTGGAGCACTGGGGGAGGAAGCC...GGTAGCCAGCCTGCCTGTTCTACAAGGACACCAGATTCCTTGCTTGGAGTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCGGATACCAGCATCCAAGCAGGGGACAGGAGTGGCTTCCAACAGACCCCCAAAACCTGTCAGCAATaGTGGATGGCTTGTCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: SADTSIQAGDRSGFQQTPKTCQQ*WMACHR Trigger: TCGGTGACAAGCCATCCAGCATTGCTGACAGGTTTT...GGGGGTCTGTTGGAAGCCACTCCTGTCCCCTGCTTGGATGCTGGTATCCGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGCTGTTCCCCAAGCCCCAAGCTAGCTTCCGGATATaGGCTTTGGGGCCCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCRLFPKPQASFRI*ALGPSP Trigger: TGGTGAGGGCCCCAAAGCCCATATCCGGAAGCTAGC...TTGGGGCTTGGGGAACAGCCTACACACACACACACACACACACACACACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CAA 72 bp | CCCAGAAGCACTCAACCGTGTCACCTCCAAATAGGCTaGGAGCCTGGGAGATGCCTGTTTCTCATCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRSTQPCHLQIG*EPGRCLFLIQA Trigger: AGCTTGGATGAGAAACAGGCATCTCCCAGGCTCCAAGCCTATTTGGAGGTGACACGGTTGAGTGCTTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CAA 72 bp | ACCCCTGAGAGTTCAAGGCCAGCCTGGGTAAGACCTTaGCCTCCTGCCTGCAAAGCAATCCTGAAACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPESSRPAWVRP*PPACKAILKHG Trigger: ACCATGTTTCAGGATTGCTTTGCAGGCAGGAGGCAAAGGTCTTACCCAGGCTGGCCTTGAACTCTCAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CAA 72 bp | CCATCAGGCACGGAGCTCTGGGCTCCATCCCCAGCATaGTGTAAATCCAACATGGTGGTACATGCCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSGTELWAPSPA*CKSNMVVHAWN Trigger: ATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGATGGAGCCCAGAGCTCCGTGCCTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| 3UTR CAA 72 bp | GGAACTGGCTCTGTAGACCAGGCTGGGCTCTGTCTCTaGAGTATCACCTCCACTGCCCAGCTTATGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGSVDQAGLCL*SITSTAQLMSV Trigger: AACTGACATAAGCTGGGCAGTGGAGGTGATACTCAAGAGACAGAGCCCAGCCTGGTCTACAGAGCCAGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTGCAAATCTGTGTCAGTTTCTGCAGCTCCCAATCCCCATTCTGAACACCTTCCAGGCTGTGGCTTaGAGAAGGACAGGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESANLCQFLQLPIPILNTFQAVA*RRTGRR Trigger: CCTACGGCCTGTCCTTCTTCAAGCCACAGCCTGGAA...GGTGTTCAGAATGGGGATTGGGAGCTGCAGAAACTGACACAGATTTGCAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR GCA 90 bp | CAGGACGGAGCCTGGGAGACCAGAGCCTCAAAGGGCTTTCCACGGAGATCAGAAGAGCTCCACGGGAACTaGCCAGTAACTTTATATAAG | + |
|
Preference number: 4 (lower is better) Translates to: QDGAWETRASKGFPRRSEELHGN*PVTLYK Trigger: CTTATATAAAGTTACTGGGCAGTTCCCGTGGAGCTC...TTCTGATCTCCGTGGAAAGCCCTTTGAGGCTCTGGTCTCCCAGGCTCCGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGCTGTTCCCCAAGCCCCAATCCTCCAGTGTAGCCTaGCAGCTCCTGGTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCRLFPKPQSSSVA*QLLVDF Trigger: AAAGTCAACCAGGAGCTGGCAGGCTACACTGGAGGA...TTGGGGCTTGGGGAACAGCCTACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAAGGTCCCAGGGAGGACAGGAGCTGGTCTGCATGAGACCATGGGGGTGGAAGAAAACTGGAAAGTaGCTTTTTCTGCTCGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKRSQGGQELVCMRPWGWKKTGK*LFLLVP Trigger: TGGGACGAGCAGAAAAAGTCACTTTCCAGTTTTCTT...CCACCCCCATGGTCTCATGCAGACCAGCTCCTGTCCTCCCTGGGACCTTTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGCATTGTGTAAATCCAACATGGTGGTACATGCCTGGAATGCCAGCACTTCCCACTTGACAGTGTaGCTGGTCTTCCACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPALCKSNMVVHAWNASTSHLTV*LVFHRG Trigger: TCCCCTGTGGAAGACCAGTCACACTGTCAAGTGGGA...AGTGCTGGCATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGGGCTTTCCACGGAGATCAGAAATGAGGCAAGCTCGAGACAGAAAGCTGTCAGCAATGCTGGATaGCTTGTCACCGATGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LKGLSTEIRNEASSRQKAVSNAG*LVTDGH Trigger: GTGCCCATCGGTGACAAGCCATCCAGCATTGCTGAC...AGCTTTCTGTCTCGAGCTTGCCTCATTTCTGATCTCCGTGGAAAGCCCTTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR TCA 90 bp | GGTTCCGGACAAACAGCCTTGCTCAGGACGCCAGCACACTCCAAGCAAGGAATCTCTTGGCAAGATAGATaGATTTCGAGAGTCGATGAC | + |
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Preference number: 4 (lower is better) Translates to: GSGQTALLRTPAHSKQGISWQDR*ISRVDD Trigger: GTCATCGACTCTCGAAATTCATCTATCTTGCCAAGA...GATTCCTTGCTTGGAGTGTGCTGGCGTCCTGAGCAAGGCTGTTTGTCCGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR TCA 90 bp | AGAAGTCACCTGAAAGCCCTTAGGCCCAGGACAGCACAGGTCAGACTGTCACATGGAAAAAGTGAGTTCTaGAAAGCTCTCCGAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RSHLKALRPRTAQVRLSHGKSEF*KALRSH Trigger: GTGGCTTCGGAGAGCTTTTCAGAACTCACTTTTTCC...ATGTGACAGTCTGACCTGTGCTGTCCTGGGCCTAAGGGCTTTCAGGTGACTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR GCA 90 bp | AGAAGTCACCTGAAAGCCCTTAGGCCCAGGACAGCACAGGTCAGACTGTCACATGGGAAAACTGTACTCTaGAGACACTCCTCTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RSHLKALRPRTAQVRLSHGKTVL*RHSSVC Trigger: ACAGACAGAGGAGTGTCTGCAGAGTACAGTTTTCCC...ATGTGACAGTCTGACCTGTGCTGTCCTGGGCCTAAGGGCTTTCAGGTGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR CCA 90 bp | AGAAGTCACCTGAAAGCCCTTAGGCCCAGGACAGCACAGGTCAGACTGTCACATATCCCAGCTCCAAACTaGACACCATCACAAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: RSHLKALRPRTAQVRLSHIPAPN*TPSQIL Trigger: CAGGATTTGTGATGGTGTCCAGTTTGGAGCTGGGAT...ATGTGACAGTCTGACCTGTGCTGTCCTGGGCCTAAGGGCTTTCAGGTGACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR TCA 90 bp | TCCCCAGCATTGTGTAAATCCAACATGGTGGTACATGCCTGGAATGCCAGCACTAGCGGCTTATTCAGCTaGAGCTCAAAGTCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SPALCKSNMVVHAWNASTSGLFS*SSKSSL Trigger: CAAGGAAGACTTTGAGCTTCAGCTGAATAAGCCGCT...AGTGCTGGCATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR GCA 90 bp | GGGTTCTCAAAGGTCATGGAGTCTGCAAATCTGTGTCAGTTTCTGCAGCTCCCAGAAAGTGACTTTTTCTaGTCGTCCCAGAAGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GFSKVMESANLCQFLQLPESDFF*SSQKVG Trigger: CCCAACCTTCTGGGACGAGCAGAAAAAGTCACTTTC...TGGGAGCTGCAGAAACTGACACAGATTTGCAGACTCCATGACCTTTGAGAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR TCA 90 bp | TCCCCAGCATTGTGTAAATCCAACATGGTGGTACATGCCTGGAATGCCAGCACTGCATTGAGGAAAAAGTaGGTTCTGAAAAGCTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SPALCKSNMVVHAWNASTALRKK*VLKSSP Trigger: CGGAGAGCTTTTCAGAACTCACTTTTTCCTCAATGC...AGTGCTGGCATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CCA 90 bp | TCTGAAAAGCTCTCCGAAGCCACCCTGGCCTGGCCGGAAGGGCAGTaGGGTGTAGAGGTGCAGGCCCCCAGCCCAGTAGGCCTCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SEKLSEATLAWPEGQ*GVEVQAPSPVGLAA Trigger: GGCGGCGAGGCCTACTGGGCTGGGGGCCTGCACCTCTACACCCCACTGCCCTTCCGGCCAGGCCAGGGTGGCTTCGGAGAGCTTTTCAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS TCA 90 bp | CAGTCCTCGAGAGGCAGCCCAGCTCCCGCCACACACCCTCCCACTTaGCAGTGTGACTGGTCTTCCACAGGGGAAAACTGTACTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: QSSRGSPAPATHPPT*QCDWSSTGENCTLQ Trigger: CTGCAGAGTACAGTTTTCCCCTGTGGAAGACCAGTCACACTGTCAAGTGGGAGGGTGTGTGGCGGGAGCTGGGCTGCCTCTCGAGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS GCA 90 bp | TTTCGCTTCCGGCTCAACTTCCACAAACTCGGCTTCCTCCCCCAGTaGTCCAAAGTCAGTTCCACTCGACGGGAGGGGCTCCAGACTCCG | + |
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Preference number: 5 (lower is better) Translates to: FRFRLNFHKLGFLPQ*SKVSSTRREGLQTP Trigger: CGGAGTCTGGAGCCCCTCCCGTCGAGTGGAACTGACTTTGGAGCACTGGGGGAGGAAGCCGAGTTTGTGGAAGTTGAGCCGGAAGCGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS TCA 90 bp | GAGAGGCAGCCCAGCTCCCGCCACACACCCTCCCACTTGACAGTGTaGCTGGTCTTCCACAGGGGAAAACTGTACTCTGCAGACACTCCT | + |
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Preference number: 5 (lower is better) Translates to: ERQPSSRHTPSHLTV*LVFHRGKLYSADTP Trigger: AGGAGTGTCTGCAGAGTACAGTTTTCCCCTGTGGAAGACCAGTCACACTGTCAAGTGGGAGGGTGTGTGGCGGGAGCTGGGCTGCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR CAA 90 bp | TGCGTATCTGCGGATACCAGCATCCAAGCAGGGGACAGGAGTGGCTTCCAACAGGCAATGCTGGATGGCTaGTCACCGATGGGCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: CVSADTSIQAGDRSGFQQAMLDG*SPMGTS Trigger: GCTGGTGCCCATCGGTGACAAGCCATCCAGCATTGC...CTGTTGGAAGCCACTCCTGTCCCCTGCTTGGATGCTGGTATCCGCAGATACGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CCA 90 bp | ATGGCTTGTCACCGATGGGCACCAGCATTCCACCCCAGAGAGACGTaGAGAATACCGAGTCCAAGGCGAGCGGCTTATTCAGCTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: MACHRWAPAFHPRET*RIPSPRRAAYSAEA Trigger: AGCTTCAGCTGAATAAGCCGCTCGCCTTGGACTCGGTATTCTCCACGTCTCTCTGGGGTGGAATGCTGGTGCCCATCGGTGACAAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CCA 90 bp | CTCCCAGGTAAAACCTGTCAGCAATGCTGGATGGCTTGTCACCGATaGGCACCAGCATTCCACCCCAGAGAGACGTGGAGAATACCGAGT | + |
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Preference number: 5 (lower is better) Translates to: LPGKTCQQCWMACHR*APAFHPRETWRIPS Trigger: ACTCGGTATTCTCCACGTCTCTCTGGGGTGGAATGCTGGTGCCCATCGGTGACAAGCCATCCAGCATTGCTGACAGGTTTTACCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR CAA 90 bp | TCCCCAGCATTGTGTAAATCCAACATGGTGGTACATGCCTGGAATGCCAGCACTTCCAGCCGAGCGATGTaGCCAAGTCGGAGGACGACG | + |
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Preference number: 5 (lower is better) Translates to: SPALCKSNMVVHAWNASTSSRAM*PSRRTT Trigger: CGTCGTCCTCCGACTTGGCAACATCGCTCGGCTGGA...AGTGCTGGCATTCCAGGCATGTACCACCATGTTGGATTTACACAATGCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS TCA 90 bp | ATTTCGAGAGTCGATGACCATGGCATGCGAGAGAGACGACTTCAGTaGGTGTCCACTTTCCTTCCGCACAGCGAACGACGCAGTCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: ISRVDDHGMRERRLQ*VSTFLPHSERRSPR Trigger: TCGAGGACTGCGTCGTTCGCTGTGCGGAAGGAAAGTGGACACTCACTGAAGTCGTCTCTCTCGCATGCCATGGTCATCGACTCTCGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR CAA 90 bp | CTCAAAGGGCTTTCCACGGAGATCAGAAATGAGGCAAGCTCGAGACAGAAAGCTGCTCGTCCCAGAAGGTaGGGGAGTTTGAGGCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: LKGLSTEIRNEASSRQKAARPRR*GSLRPS Trigger: ACTCGGCCTCAAACTCCCCAACCTTCTGGGACGAGC...AGCTTTCTGTCTCGAGCTTGCCTCATTTCTGATCTCCGTGGAAAGCCCTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGCTGTTCCCCAAGCCCCAAGTGACATCTAACCCATaGGGCAGGGCATCTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCRLFPKPQVTSNP*GRASSP Trigger: TGGTGAAGATGCCCTGCCCAATGGGTTAGATGTCAC...TTGGGGCTTGGGGAACAGCCTACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS TCA 90 bp | AGAGACGTGGAGAATACCGAGTCCAAGGCGAGCGGCTTATTCAGCTaGAGCTCAAAGTCTTCCTTGATGAAGCTCACATCTCCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: RDVENTESKASGLFS*SSKSSLMKLTSPPV Trigger: CACTGGAGGAGATGTGAGCTTCATCAAGGAAGACTTTGAGCTTCAGCTGAATAAGCCGCTCGCCTTGGACTCGGTATTCTCCACGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS-3UTR CAA 90 bp | AGAAGTCACCTGAAAGCCCTTAGGCCCAGGACAGCACAGGTCAGACTGTCACATAGCTCAAAGTCTTCCTaGATGAAGCTCACATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RSHLKALRPRTAQVRLSHSSKSS*MKLTSP Trigger: AGGAGATGTGAGCTTCATCAAGGAAGACTTTGAGCT...ATGTGACAGTCTGACCTGTGCTGTCCTGGGCCTAAGGGCTTTCAGGTGACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS TCA 90 bp | ATAAGTTTACGGAGAAATTTCTCTCGAAGTTTCCAGGCTGTGGCTTaGAGAAGGACAGGCCGTAGGAAGTTTCTTTGGTTCCATAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: ISLRRNFSRSFQAVA*RRTGRRKFLWFHKK Trigger: TTTCTTATGGAACCAAAGAAACTTCCTACGGCCTGTCCTTCTTCAAGCCACAGCCTGGAAACTTCGAGAGAAATTTCTCCGTAAACTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CCA 72 bp | GTGAGTTCTGAAAAGCTCTCCGAAGCCACCCTGGCCTaGCCGGAAGGGCAGTGGGGTGTAGAGGTGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSSEKLSEATLA*PEGQWGVEVQA Trigger: GGCCTGCACCTCTACACCCCACTGCCCTTCCGGCCAGGCCAGGGTGGCTTCGGAGAGCTTTTCAGAACTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS GCA 72 bp | GTCGGAGGACGACGCCTGCTCCATAGGACCAGCGGATaGACTCAGCTAGCTTCCGGATATGGGCTTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: VGGRRLLHRTSG*TQLASGYGLWG Trigger: GCCCCAAAGCCCATATCCGGAAGCTAGCTGAGTGCATCCGCTGGTCCTATGGAGCAGGCGTCGTCCTCCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS GCA 72 bp | CGGCTCAACTTCCACAAACTCGGCTTCCTCCCCCAGTaGTCCAAAGTCAGTTCCACTCGACGGGAGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: RLNFHKLGFLPQ*SKVSSTRREGL Trigger: GAGCCCCTCCCGTCGAGTGGAACTGACTTTGGAGCACTGGGGGAGGAAGCCGAGTTTGTGGAAGTTGAGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS TCA 72 bp | CCCAGCTCCCGCCACACACCCTCCCACTTGACAGTGTaGCTGGTCTTCCACAGGGGAAAACTGTACTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PSSRHTPSHLTV*LVFHRGKLYSA Trigger: TGCAGAGTACAGTTTTCCCCTGTGGAAGACCAGTCACACTGTCAAGTGGGAGGGTGTGTGGCGGGAGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CCA 72 bp | CACCGATGGGCACCAGCATTCCACCCCAGAGAGACGTaGAGAATACCGAGTCCAAGGCGAGCGGCTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: HRWAPAFHPRET*RIPSPRRAAYS Trigger: TGAATAAGCCGCTCGCCTTGGACTCGGTATTCTCCACGTCTCTCTGGGGTGGAATGCTGGTGCCCATCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CCA 72 bp | TCGTGGGGCCTCCCAGGTAAAACCTGTCAGCAATGCTaGATGGCTTGTCACCGATGGGCACCAGCATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SWGLPGKTCQQC*MACHRWAPAFH Trigger: GTGGAATGCTGGTGCCCATCGGTGACAAGCCATCCAGCATTGCTGACAGGTTTTACCTGGGAGGCCCCACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS TCA 72 bp | GTCGATGACCATGGCATGCGAGAGAGACGACTTCAGTaGGTGTCCACTTTCCTTCCGCACAGCGAACGACGC | + |
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Preference number: 6 (lower is better) Translates to: VDDHGMRERRLQ*VSTFLPHSERR Trigger: GCGTCGTTCGCTGTGCGGAAGGAAAGTGGACACTCACTGAAGTCGTCTCTCTCGCATGCCATGGTCATCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CCA 72 bp | AAAACCTGTCAGCAATGCTGGATGGCTTGTCACCGATaGGCACCAGCATTCCACCCCAGAGAGACGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: KTCQQCWMACHR*APAFHPRETWR Trigger: TCTCCACGTCTCTCTGGGGTGGAATGCTGGTGCCCATCGGTGACAAGCCATCCAGCATTGCTGACAGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CAA 72 bp | GTGACTTTTTCTGCTCGTCCCAGAAGGTTGGGGAGTTaGAGGCCGAGTACCATACTGCCTTCGTTGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VTFSARPRRLGS*RPSTILPSLFP Trigger: TGGAAACAACGAAGGCAGTATGGTACTCGGCCTCAAACTCCCCAACCTTCTGGGACGAGCAGAAAAAGTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS TCA 72 bp | CGGAGAAATTTCTCTCGAAGTTTCCAGGCTGTGGCTTaGAGAAGGACAGGCCGTAGGAAGTTTCTTTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RRNFSRSFQAVA*RRTGRRKFLWF Trigger: GAACCAAAGAAACTTCCTACGGCCTGTCCTTCTTCAAGCCACAGCCTGGAAACTTCGAGAGAAATTTCTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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| CDS CCA 72 bp | GTTTACGGAGAAATTTCTCTCGAAGTTTCCAGGCTGTaGCTTGAAGAAGGACAGGCCGTAGGAAGTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VYGEISLEVSRL*LEEGQAVGSFF Trigger: AAAGAAACTTCCTACGGCCTGTCCTTCTTCAAGCCACAGCCTGGAAACTTCGAGAGAAATTTCTCCGTAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023071.8 |
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