Pregenerated sensors for SAMD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051860Ensembl transcript IDs: ENSMUST00000108262.10, ENSMUST00000172593.2, ENSMUST00000174395.8
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATGGGTGTaGTTAGGAAGGTGTGTTTCTTTGGTTCAGCACACTGTAGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: WDRSHSRDPCRALWV*LGRCVSLVQHTVGE Trigger: CTCCCCTACAGTGTGCTGAACCAAAGAAACACACCTTCCTAAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR CCA 90 bp | CTTTGCCCTGCCTCCTCCCATCAGCACCTGCTGCTCCATCAGGGTTaGGCGATGGAAGGAGTGAGTAGAAGGAGGTTCCCTTTCAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LCPASSHQHLLLHQG*AMEGVSRRRFPFSF Trigger: GAAACTGAAAGGGAACCTCCTTCTACTCACTCCTTCCATCGCCCAACCCTGATGGAGCAGCAGGTGCTGATGGGAGGAGGCAGGGCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR TCA 90 bp | CCCATCAGCACCTGCTGCTCCATCAGGGTTGGGCGATGGAAGGAGTaGGTAGAAGGAGGTTCCCTTTCAGTTTCTGCTCTCCACTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: PISTCCSIRVGRWKE*VEGGSLSVSALHFF Trigger: GAAGAAGTGGAGAGCAGAAACTGAAAGGGAACCTCCTTCTACTCACTCCTTCCATCGCCCAACCCTGATGGAGCAGCAGGTGCTGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR CCA 90 bp | GTGGGGGTTGGCGGGAACTGTAGTTGGCTTTCCATCAGCGACCCTTaGCTTCTGCTGGTTGTCTACCTCAATGTCTGGATCCTTGATATA | + |
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Preference number: 1 (lower is better) Translates to: VGVGGNCSWLSISDP*LLLVVYLNVWILDI Trigger: TATATCAAGGATCCAGACATTGAGGTAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAAAGCCAACTACAGTTCCCGCCAACCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR CCA 90 bp | GCGGGAACTGTAGTTGGCTTTCCATCAGCGACCCTTGGCTTCTGCTaGTTGTCTACCTCAATGTCTGGATCCTTGATATACTCTTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: AGTVVGFPSATLGFC*LSTSMSGSLIYSSS Trigger: GGAGGAAGAGTATATCAAGGATCCAGACATTGAGGTAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAAAGCCAACTACAGTTCCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR TCA 90 bp | CGACCCTTGGCTTCTGCTGGTTGTCTACCTCAATGTCTGGATCCTTaGTATACTCTTCCTCCTCATAGGAAAGTGTGGGCATCTGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: RPLASAGCLPQCLDP*YTLPPHRKVWASGL Trigger: CAAGCCAGATGCCCACACTTTCCTATGAGGAGGAAGAGTATATCAAGGATCCAGACATTGAGGTAGACAACCAGCAGAAGCCAAGGGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR GCA 90 bp | TTGGCGGGAACTGTAGTTGGCTTTCCATCAGCGACCCTTGGCTTCTaGTGGTTGTCTACCTCAATGTCTGGATCCTTGATATACTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LAGTVVGFPSATLGF*WLSTSMSGSLIYSS Trigger: GGAAGAGTATATCAAGGATCCAGACATTGAGGTAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAAAGCCAACTACAGTTCCCGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR TCA 90 bp | TACCAGGAAGCCTGTTGGGTGAGATCCTTCTTCCAAGACATTCTGTaGGCATGGTCTCGCTCTTTTTGTCCACCAGTTGAAGGTCTCACA | + |
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Preference number: 1 (lower is better) Translates to: YQEACWVRSFFQDIL*AWSRSFCPPVEGLT Trigger: TGTGAGACCTTCAACTGGTGGACAAAAAGAGCGAGACCATGCTCACAGAATGTCTTGGAAGAAGGATCTCACCCAACAGGCTTCCTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR TCA 90 bp | CCATTCAAAATAAGACCTCCTATGCTTGCCAGCCAGTCCCCTCTCTaGTCATACTGTTGCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PFKIRPPMLASQSPL*SYCCQCVCVCVCVC Trigger: ACACACACACACACACACACACACACACTGGCAACAGTATGATCAGAGAGGGGACTGGCTGGCAAGCATAGGAGGTCTTATTTTGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR CCA 90 bp | GCACACTGTAGGGGAGGGGTATACAAAGGCAAGCACCCTCGACAATaGGTGGGCTATCTTAAAGGCTTTCTGCTAGGGTTTATTTACTTG | + |
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Preference number: 1 (lower is better) Translates to: AHCRGGVYKGKHPRQ*VGYLKGFLLGFIYL Trigger: CAAGTAAATAAACCCTAGCAGAAAGCCTTTAAGATAGCCCACCCATTGTCGAGGGTGCTTGCCTTTGTATACCCCTCCCCTACAGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR TCA 90 bp | GACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCACAACTaGATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: DPSFPLPPHMATVHN*IHPNLCLLFPVSKS Trigger: AGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTGTCCCTTTGGAGTCATTCTGTCAAATGTTAAGTTaGAAGCCTGGACACAGCCACCTTTATCATCACCTCTCTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVPLESFCQMLS*KPGHSHLYHHLSLT Trigger: AGTGAGAGAGAGGTGATGATAAAGGTGGCTGTGTCCAGGCTTCCAACTTAACATTTGACAGAATGACTCCAAAGGGACACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR TCA 90 bp | GGAAGGCTTCTGATGAAGTTATACACATCGTCCACGGTCCACTTCTaGATATCAGACAAAGAGCAGTTTTCTCTGAGTGCAACCTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: GRLLMKLYTSSTVHF*ISDKEQFSLSATCS Trigger: TGAGCAGGTTGCACTCAGAGAAAACTGCTCTTTGTCTGATATTCAGAAGTGGACCGTGGACGATGTGTATAACTTCATCAGAAGCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR GCA 90 bp | TCAAGGTTTACAATTCAGACCATTCAAAATAAGACCTCCTATGCTTaGCAGCCAGTCCCCTCTCTGATCATACTGTTGCCAGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SRFTIQTIQNKTSYA*QPVPSLIILLPVCV Trigger: CACACACACTGGCAACAGTATGATCAGAGAGGGGACTGGCTGGCAAGCATAGGAGGTCTTATTTTGAATGGTCTGAATTGTAAACCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR TCA 90 bp | TCTCGCTCTTTTTGTCCACCAGTTGAAGGTCTCACACCCTGCTGGTaGCATCTGGAACATCTGTGTCTTTGGGTGTTTTTAATTTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SRSFCPPVEGLTPCW*HLEHLCLWVFLISH Trigger: ATGAGAAATTAAAAACACCCAAAGACACAGATGTTCCAGATGTCACCAGCAGGGTGTGAGACCTTCAACTGGTGGACAAAAAGAGCGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| 3UTR GCA 90 bp | TCTTTCCATTCTACGTTGCTGGTAAAGAGAATACATTTCCATTTCTaGCCTGGCAGCGTGATGTCTTTCAAACATCTCATTCCTTGTGGT | + |
|
Preference number: 1 (lower is better) Translates to: SFHSTLLVKRIHFHF*PGSVMSFKHLIPCG Trigger: ACCACAAGGAATGAGATGTTTGAAAGACATCACGCTGCCAGGGCAGAAATGGAAATGTATTCTCTTTACCAGCAACGTAGAATGGAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCCACCGCTTTGCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCACCTCTAGAGGAAGGGCTTaGATGCCCACCTTCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: LPHRFALPLPGPLVSTPTSRGRA*MPTFQT Trigger: GGTCTGGAAGGTGGGCATCCAAGCCCTTCCTCTAGA...GGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGCAAAGCGGTGGGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCCTGCCGGGCCTTATaGGTGTGCTTAGGAAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: ALPLPGPLVSTPTTHGHSPCRAL*VCLGRC Trigger: ACACCTTCCTAAGCACACCCATAAGGCCCGGCAGGG...ACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGCCGGCAGTGTGCTCCTGCCCTGGAAACCCGTGGGGCCACCCAGGCAACTCTCACACCCTGCTGGTaGCATCTGGAACATCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TGRQCAPALETRGATQATLTPCW*HLEHLC Trigger: ACACAGATGTTCCAGATGTCACCAGCAGGGTGTGAG...AGTTGCCTGGGTGGCCCCACGGGTTTCCAGGGCAGGAGCACACTGCCGGCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCCCCACCGCTTTGCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCAAAGGCAGGCAAGCTCTaGGGTGTCCACTGTCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FSPTALPSHSRDPSFPLPKAGKL*GVHCQG Trigger: ACCTTGACAGTGGACACCGCAGAGCTTGCCTGCCTT...TGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGCAAAGCGGTGGGGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCCCACCGCTTTGCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCACTGCTCCATCAGGGTTaGGCGATGGAAGGAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: FSPTALPSHSRDPSFPLPLLHQG*AMEGVS Trigger: ACTCACTCCTTCCATCGCCCAACCCTGATGGAGCAG...TGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGCAAAGCGGTGGGGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCACAACGGGCCTTATGGGTGTaGTTAGGAAGGTGTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PLPGPLVSTPTTHGHSPQRALWV*LGRCVS Trigger: AGAAACACACCTTCCTAAGCACACCCATAAGGCCCG...TTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATGGGACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATGGGTGTGCTTCTGCTCCATCAGGGTTaGGCGATGGAAGGAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: EMGQKPQQGSLPGLMGVLLLHQG*AMEGVS Trigger: ACTCACTCCTTCCATCGCCCAACCCTGATGGAGCAG...AAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCAAAAAGCAGTGACTaGAAACAGCAAGTTTGCGAC | + |
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Preference number: 2 (lower is better) Translates to: ALPLPGPLVSTPTTHGHSPKSSD*KQQVCD Trigger: GTCGCAAACTTGCTGTTTCCAGTCACTGCTTTTTGG...ACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCACAACTTGGAGAGGGAAACTaGCGTAGAAATGGGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: PLPGPLVSTPTTHGHSPQLGEGN*RRNGTE Trigger: TTCTGTCCCATTTCTACGTCAGTTTCCCTCTCCAAG...TTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCTTCTGCTTGACTTTTaGAACTCTCAGTGTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: ALPLPGPLVSTPTTHGHSLLLDF*NSQCHS Trigger: AGAGTGACACTGAGAGTTTCAAAAGTCAAGCAGAAG...ACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGACTAAGGTCTTGTGAGTTGGCATTAGGCTGTGGACCAAGACTTTCACATCACTGGCCGGCAGTGTaGTCCTGCCCTGGAAACCCG | + |
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Preference number: 2 (lower is better) Translates to: PGLRSCELALGCGPRLSHHWPAV*SCPGNP Trigger: CGGGTTTCCAGGGCAGGAGCACACTGCCGGCCAGTG...ATGTGAAAGTCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| 3UTR CAA 90 bp | GATCCCTGCCGGGCCTTATGGGTGTGCTTAGGAAGGTGTGTTTCTTaGGTTCAGCACACTGTAGGGGAGGGGTATACAAAGGCAAGCACC | + |
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Preference number: 2 (lower is better) Translates to: DPCRALWVCLGRCVS*VQHTVGEGYTKAST Trigger: GGTGCTTGCCTTTGTATACCCCTCCCCTACAGTGTGCTGAACCAAAGAAACACACCTTCCTAAGCACACCCATAAGGCCCGGCAGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATGGGACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATGGGTGTGCTTGCAGTTTTCTCTGAGTaGAACCTGCTCATGTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: EMGQKPQQGSLPGLMGVLAVFSE*NLLMCS Trigger: GGAACACATGAGCAGGTTGCACTCAGAGAAAACTGC...AAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCATGTCCAAAAGAGGGGATGTGTCTGCTGGCTGATCAAATGCTTGCCTTGCCTGACAGAGGCAGGATaGAGACTGGCCGGAAAACCC | + |
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Preference number: 2 (lower is better) Translates to: THVQKRGCVCWLIKCLPCLTEAG*RLAGKP Trigger: GGGTTTTCCGGCCAGTCTCCATCCTGCCTCTGTCAG...GCAAGGCAAGCATTTGATCAGCCAGCAGACACATCCCCTCTTTTGGACATGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR CAA 90 bp | AAGACCTCCTATGCTTGCCAGCCAGTCCCCTCTCTGATCATACTGTaGCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KTSYACQPVPSLIIL*PVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACTGGCAACAGTATGATCAGAGAGGGGACTGGCTGGCAAGCATAGGAGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCCATGGTGCCTCGAAGATGCTGTTCTGTGAGAAGGGGCAGTGTTTCTCCATTTTTGTCCACCAGTTaGAGGTCTCACACCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SPMVPRRCCSVRRGSVSPFLSTS*RSHTLL Trigger: CAGCAGGGTGTGAGACCTTCAACTGGTGGACAAAAA...TGGAGAAACACTGCCCCTTCTCACAGAACAGCATCTTCGAGGCACCATGGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGCCCCAACTTGAGTCCCATGGTGCCTCGAAGATGCTGTTCTGTGAGAAGAAGAGCAGTTTTCTCTaGGTGCAACCTGCTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: CWPQLESHGASKMLFCEKKSSFL*VQPAHV Trigger: CACATGAGCAGGTTGCACTCAGAGAAAACTGCTCTT...CTTCTCACAGAACAGCATCTTCGAGGCACCATGGGACTCAAGTTGGGGCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTTTAGGACTCAGTAGATCCTGGGGACCAGGAATGCTCAAACCATCACTCGACCTGGGCATAGTCTaGGCAGCCTGGAAGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VLLGLSRSWGPGMLKPSLDLGIV*AAWKAS Trigger: AGAAGCCTTCCAGGCTGCTCAGACTATGCCCAGGTC...GAGTGATGGTTTGAGCATTCCTGGTCCCCAGGATCTACTGAGTCCTAAAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACTCTCAGTGTCACTCTCTGGAGGCTTCTGGTAAACTGCACCTCTCCTGAGGGGATGATACAGCTCTaGGTGGTTTCCTGCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: ETLSVTLWRLLVNCTSPEGMIQL*VVSCQT Trigger: TGTCTGGCAGGAAACCACTCAGAGCTGTATCATCCC...CTCAGGAGAGGTGCAGTTTACCAGAAGCCTCCAGAGAGTGACACTGAGAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
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| 3UTR-3UTR GCA 90 bp | GATCCTGGGGACCAGGAATGCTCAAACCATCACTCCAGGAACTCATGTCCAAAAGTCTCTCATCAGCTTTaGCCTGCCTCCTCCCATCAG | + |
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Preference number: 2 (lower is better) Translates to: DPGDQECSNHHSRNSCPKVSHQL*PASSHQ Trigger: CTGATGGGAGGAGGCAGGGCAAAGCTGATGAGAGAC...TTTTGGACATGAGTTCCTGGAGTGATGGTTTGAGCATTCCTGGTCCCCAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCATAGACCTGTTCAGAGGGCTTTCCCTTCCCATCATCCCATGCGTTTGCAGGCTTCTGGTAAACTaGACCTCTCCTGAGTCGGTA | + |
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Preference number: 2 (lower is better) Translates to: AFIDLFRGLSLPIIPCVCRLLVN*TSPESV Trigger: TACCGACTCAGGAGAGGTGCAGTTTACCAGAAGCCT...GCAAACGCATGGGATGATGGGAAGGGAAAGCCCTCTGAACAGGTCTATGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | GATCCTGGGGACCAGGAATGCTCAAACCATCACTCCAGGAACTCATGTCCAAAAGGCGGGAACTGTAGTTaGCTTTCCATCAGCGACCCT | + |
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Preference number: 2 (lower is better) Translates to: DPGDQECSNHHSRNSCPKGGNCS*LSISDP Trigger: AGGGTCGCTGATGGAAAGCCAACTACAGTTCCCGCC...TTTTGGACATGAGTTCCTGGAGTGATGGTTTGAGCATTCCTGGTCCCCAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAAGGTCTCACACCCTGCTGGTGACATCTGGAACATCTGTGTCTTTGGGTGTCTCACACCCTGCTGGTaGCATCTGGAACATCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LKVSHPAGDIWNICVFGCLTPCW*HLEHLC Trigger: ACACAGATGTTCCAGATGTCACCAGCAGGGTGTGAG...ACACCCAAAGACACAGATGTTCCAGATGTCACCAGCAGGGTGTGAGACCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
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| 3UTR-3UTR TCA 90 bp | GATCCTGGGGACCAGGAATGCTCAAACCATCACTCCAGGAACTCATGTCCAAAACTCACACCCTGCTGGTaGCATCTGGAACATCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: DPGDQECSNHHSRNSCPKLTPCW*HLEHLC Trigger: ACACAGATGTTCCAGATGTCACCAGCAGGGTGTGAG...TTTTGGACATGAGTTCCTGGAGTGATGGTTTGAGCATTCCTGGTCCCCAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR-3UTR GCA 90 bp | GACCAGGAATGCTCAAACCATCACTCCAGGAACTCATGTCCAAAAGAGGGGATGTGCTGGCTGATCAAATaGTTGCCTTGCATGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: DQECSNHHSRNSCPKEGMCWLIK*LPCMGG Trigger: CCCACCCATGCAAGGCAAGCATTTGATCAGCCAGCA...CATCCCCTCTTTTGGACATGAGTTCCTGGAGTGATGGTTTGAGCATTCCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGACTAAGGTCTTGTGAGTTGGCATTAGGCTGTGGACCAAGACTTTCACATGGCGGGAACTGTAGTTaGCTTTCCATCAGCGACCCT | + |
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Preference number: 2 (lower is better) Translates to: PGLRSCELALGCGPRLSHGGNCS*LSISDP Trigger: AGGGTCGCTGATGGAAAGCCAACTACAGTTCCCGCC...ATGTGAAAGTCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | GATCCTGGGGACCAGGAATGCTCAAACCATCACTCCAGGAACTCATGTCCAAAACTCAGTGTCACTCTCTaGAGGCTTCTGGTAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: DPGDQECSNHHSRNSCPKLSVTL*RLLVNC Trigger: GCAGTTTACCAGAAGCCTCCAGAGAGTGACACTGAG...TTTTGGACATGAGTTCCTGGAGTGATGGTTTGAGCATTCCTGGTCCCCAGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCATGTCCAAAAGAGGGGATGTGTCTGCTGGCTGATCAAATGCTTGCCTTGCGAAGACGGTTTCCTCTaGTGTGTATGGAGTTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: THVQKRGCVCWLIKCLPCEDGFL*CVWSSP Trigger: CGGAGAACTCCATACACACCAGAGGAAACCGTCTTC...GCAAGGCAAGCATTTGATCAGCCAGCAGACACATCCCCTCTTTTGGACATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| 3UTR CAA 90 bp | GGAACTGTAGTTGGCTTTCCATCAGCGACCCTTGGCTTCTGCTGGTaGTCTACCTCAATGTCTGGATCCTTGATATACTCTTCCTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GTVVGFPSATLGFCW*STSMSGSLIYSSSS Trigger: TGAGGAGGAAGAGTATATCAAGGATCCAGACATTGAGGTAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAAAGCCAACTACAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCACCACACATGGCCACAGTCCACAACTGAATTCATCCAAATCTCTGTTTGCTAGACTTTCACATACCTaGAAGGCAGGCAAGCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PTTHGHSPQLNSSKSLFARLSHT*KAGKLC Trigger: GCAGAGCTTGCCTGCCTTTCAGGTATGTGAAAGTCT...AGCAAACAGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCCATGGTGCCTCGAAGATGCTGTTCTGTGAGAAGGGGCAGTGTTTCTCCACAATGTCTGGATCCTTaGTATACTCTTCCTCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SPMVPRRCCSVRRGSVSPQCLDP*YTLPPH Trigger: ATGAGGAGGAAGAGTATATCAAGGATCCAGACATTG...TGGAGAAACACTGCCCCTTCTCACAGAACAGCATCTTCGAGGCACCATGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCAAACCATCACTCCAGGAACTCATGTCCAAAAGAGGGGATGTGTCTGCTGGCCAATGTCTGGATCCTTaGTATACTCTTCCTCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LKPSLQELMSKRGDVSAGQCLDP*YTLPPH Trigger: ATGAGGAGGAAGAGTATATCAAGGATCCAGACATTG...GCCAGCAGACACATCCCCTCTTTTGGACATGAGTTCCTGGAGTGATGGTTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTCCAGGAACTCATGTCCAAAAGAGGGGATGTGTCTGCTGGCTGATCAAATGATACATTTCCATTTCTaGCCTGGCAGCGTGATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HSRNSCPKEGMCLLADQMIHFHF*PGSVMS Trigger: AGACATCACGCTGCCAGGGCAGAAATGGAAATGTAT...CATTTGATCAGCCAGCAGACACATCCCCTCTTTTGGACATGAGTTCCTGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTCCCTTTGGAGTCATTCTGTCAAATGTTAAGTaGGAAGCCTGGACACAGCCACCTTTATCATCACCTCTCTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCPFGVILSNVK*EAWTQPPLSSPLSH Trigger: GTGAGAGAGAGGTGATGATAAAGGTGGCTGTGTCCAGGCTTCCAACTTAACATTTGACAGAATGACTCCAAAGGGACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCACACTACCTCCCATCAGCACCTaGTGCTCCATCAGGGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: IHPNLCLLFPVSKSKPTLPPIST*CSIRVG Trigger: CCCAACCCTGATGGAGCAGCAGGTGCTGATGGGAGG...TAGTGTGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGACTAAGGTCTTGTGAGTTGGCATTAGGCTGTGGACCAAGACTTTCACATGTTAAGTTGGAAGCCTaGACACAGCCACCTTTATCA | + |
|
Preference number: 2 (lower is better) Translates to: PGLRSCELALGCGPRLSHVKLEA*TQPPLS Trigger: TGATAAAGGTGGCTGTGTCCAGGCTTCCAACTTAAC...ATGTGAAAGTCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGGCAGTGTTTCTCCATCAATCGCATGGTCCTTAAAGACCTGGGCATAGTCGTGTGTGTGTCCCTTTaGAGTCATTCTGTCAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: KGQCFSINRMVLKDLGIVVCVSL*SHSVKC Trigger: ACATTTGACAGAATGACTCCAAAGGGACACACACAC...GACTATGCCCAGGTCTTTAAGGACCATGCGATTGATGGAGAAACACTGCCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCACCACACATGGCCACAGTCCACAACTGAATTCATCCAAATCTCTGTTTGCTTTTCCATTTCTGCCCTaGCAGCGTGATGTCTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PTTHGHSPQLNSSKSLFAFPFLP*QRDVFQ Trigger: TTGAAAGACATCACGCTGCCAGGGCAGAAATGGAAA...AGCAAACAGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGGCAGTGTTTCTCCATCAATCGCATGGTCCTTAAAGACCTGGGCATAGTCTTCCCTTTCAGTTTCTaGTCTCCACTTCTTCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KGQCFSINRMVLKDLGIVFPFSF*SPLLQN Trigger: ATTCTGAAGAAGTGGAGAGCAGAAACTGAAAGGGAA...GACTATGCCCAGGTCTTTAAGGACCATGCGATTGATGGAGAAACACTGCCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTCTCGGGCGATGGAAGGAGTaGGTAGAAGGAGGTTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SQYCALCVSKLNLCVSILGRWKE*VEGGSL Trigger: AAGGGAACCTCCTTCTACTCACTCCTTCCATCGCCC...GAGAATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTCTCCATGGGCGATGGAAGGAGTaGGTAGAAGGAGGTTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: QYCALCVSKLNLCVSILHGRWKE*VEGGSL Trigger: AAGGGAACCTCCTTCTACTCACTCCTTCCATCGCCC...ATGGAGAATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCACACTAGTCTCTCATCAGCTTTaGCCTGCCTCCTCCCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: IHPNLCLLFPVSKSKPTLVSHQL*PASSHQ Trigger: CTGATGGGAGGAGGCAGGGCAAAGCTGATGAGAGAC...TAGTGTGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACTCTAGAGGAAGGGCTTaGATGCCCACCTTCCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: TTEFIQISVCSFQFQSLNSRGRA*MPTFQT Trigger: GGTCTGGAAGGTGGGCATCCAAGCCCTTCCTCTAGA...GTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTCTCCATTTTTTGTCCACCAGTTaGAGGTCTCACACCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QYCALCVSKLNLCVSILHFLSTS*RSHTLL Trigger: CAGCAGGGTGTGAGACCTTCAACTGGTGGACAAAAA...ATGGAGAATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCAAGGCTTCTGGTAAACTaGACCTCTCCTGAGTCGGTA | + |
|
Preference number: 2 (lower is better) Translates to: TEFIQISVCSFQFQSLNPRLLVN*TSPESV Trigger: TACCGACTCAGGAGAGGTGCAGTTTACCAGAAGCCT...TGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTCTCCATTACCAGGAAGCCTGTTaGGTGAGATCCTTCTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: QYCALCVSKLNLCVSILHYQEAC*VRSFFQ Trigger: TTGGAAGAAGGATCTCACCCAACAGGCTTCCTGGTA...ATGGAGAATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCATACCAGGAAGCCTGTTaGGTGAGATCCTTCTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TEFIQISVCSFQFQSLNPYQEAC*VRSFFQ Trigger: TTGGAAGAAGGATCTCACCCAACAGGCTTCCTGGTA...TGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTCTCCATTGGAAACAGCAAGTTTaGGACAACAGTTCTGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QYCALCVSKLNLCVSILHWKQQV*DNSSVV Trigger: GACCACAGAACTGTTGTCGCAAACTTGCTGTTTCCA...ATGGAGAATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTCTCTTCCCTTTCAGTTTCTaGTCTCCACTTCTTCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SQYCALCVSKLNLCVSILFPFSF*SPLLQN Trigger: ATTCTGAAGAAGTGGAGAGCAGAAACTGAAAGGGAA...GAGAATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | TGCTCCTGTGCAAATGCACATCACTGGCCGGCAGTGTaGTCCTGCCCTGGAAACCCGTGGGGCCACCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CSCANAHHWPAV*SCPGNPWGHPG Trigger: GCCTGGGTGGCCCCACGGGTTTCCAGGGCAGGAGCACACTGCCGGCCAGTGATGTGCATTTGCACAGGAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTTGTCTCTCATCAGCTTaGCCCTGCCTCCTCCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: ALPLPGPLVSTPTTHGHSCLSSA*PCLLPS Trigger: TGATGGGAGGAGGCAGGGCAAAGCTGATGAGAGACA...ACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCACAAGTCACCCAGGGCCTCTaGGAGAGGGAAACTGACGTA | + |
|
Preference number: 3 (lower is better) Translates to: PLPGPLVSTPTTHGHSPQVTQGL*ERETDV Trigger: TACGTCAGTTTCCCTCTCCAAGAGGCCCTGGGTGAC...TTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCCCCACCGCTTTGCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCACTTTTTGTCCACCAGTaGAAGGTCTCACACCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FSPTALPSHSRDPSFPLPLFVHQ*KVSHPA Trigger: AGCAGGGTGTGAGACCTTCAACTGGTGGACAAAAAG...TGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGCAAAGCGGTGGGGGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | GCCTCCTCCCATCAGCACCTGCTGCTCCATCAGGGTTaGGCGATGGAAGGAGTGAGTAGAAGGAGGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ASSHQHLLLHQG*AMEGVSRRRFP Trigger: AGGGAACCTCCTTCTACTCACTCCTTCCATCGCCCAACCCTGATGGAGCAGCAGGTGCTGATGGGAGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | ACGTGGTGTCACCCAGGGCCTCTTGGAGAGGGAAACTaGCGTAGAAATGGGACAGAAGCCACAGCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: TWCHPGPLGEGN*RRNGTEATAGI Trigger: GATCCCTGCTGTGGCTTCTGTCCCATTTCTACGTCAGTTTCCCTCTCCAAGAGGCCCTGGGTGACACCACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | GACCTGTTCAGAGGGCTTTCCCTTCCCATCATCCCATaGGTTTGCCTCCAGGGAAGACGGTTTCCTCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DLFRGLSLPIIP*VCLQGRRFPLV Trigger: CACCAGAGGAAACCGTCTTCCCTGGAGGCAAACGCATGGGATGATGGGAAGGGAAAGCCCTCTGAACAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | CAGCAAGTTTGCGACAACAGTTCTGTGGTCAGGGACTaGACGGAGGCTTGGCAGAGAGCCTGGACTAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QQVCDNSSVVRD*TEAWQRAWTKV Trigger: GACCTTAGTCCAGGCTCTCTGCCAAGCCTCCGTTCAGTCCCTGACCACAGAACTGTTGTCGCAAACTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | GCAGTTTTCTCTGAGTGCAACCTGCTCATGTGTTCCTaGCAGAGGCAGGATGGAGACTGGCCGGAAAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: AVFSECNLLMCS*QRQDGDWPENP Trigger: GGGGTTTTCCGGCCAGTCTCCATCCTGCCTCTGTCAGGAACACATGAGCAGGTTGCACTCAGAGAAAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | AGCCACAGCAGGGATCCCTGCCGGGCCTTATGGGTGTaGTTAGGAAGGTGTGTTTCTTTGGTTCAGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: SHSRDPCRALWV*LGRCVSLVQHT Trigger: AGTGTGCTGAACCAAAGAAACACACCTTCCTAAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | GACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATaGGTGTGCTTAGGAAGGTGTGTTTCTTTGGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DRSHSRDPCRAL*VCLGRCVSLVQ Trigger: CTGAACCAAAGAAACACACCTTCCTAAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | TTTCTCCTCGGGGCAGTTCTTCAGAACCTTGGTGCTTaGTTTGCTTCGGCTTACCAGGAAGCCTGTTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FLLGAVLQNLGA*FASAYQEACWV Trigger: CACCCAACAGGCTTCCTGGTAAGCCGAAGCAAACCAAGCACCAAGGTTCTGAAGAACTGCCCCGAGGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | GTGACTGGAAACAGCAAGTTTGCGACAACAGTTCTGTaGTCAGGGACTGAACGGAGGCTTGGCAGAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VTGNSKFATTVL*SGTERRLGREP Trigger: AGGCTCTCTGCCAAGCCTCCGTTCAGTCCCTGACCACAGAACTGTTGTCGCAAACTTGCTGTTTCCAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | ACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATaGCCACAGTCCACAACTGAATTCATCCAAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TPGTPRFHSHHT*PQSTTEFIQIS Trigger: AGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | GGCGGGAACTGTAGTTGGCTTTCCATCAGCGACCCTTaGCTTCTGCTGGTTGTCTACCTCAATGTCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: GGNCSWLSISDP*LLLVVYLNVWI Trigger: GATCCAGACATTGAGGTAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAAAGCCAACTACAGTTCCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | GTGCAACCTGCTCATGTGTTCCTGACAGAGGCAGGATaGAGACTGGCCGGAAAACCCCATTCTTTCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: VQPAHVFLTEAG*RLAGKPHSFHH Trigger: GTGATGGAAAGAATGGGGTTTTCCGGCCAGTCTCCATCCTGCCTCTGTCAGGAACACATGAGCAGGTTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | ACGGAGGCTTGGCAGAGAGCCTGGACTAAGGTCTTGTaGGTTGGCATTAGGCTGTGGACCAAGACTTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: TEAWQRAWTKVL*VGIRLWTKTFT Trigger: TGTGAAAGTCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGGCTCTCTGCCAAGCCTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | GCATTTTCTCCTCGGGGCAGTTCTTCAGAACCTTGGTaGTTGGTTTGCTTCGGCTTACCAGGAAGCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AFSPRGSSSEPW*LVCFGLPGSLL Trigger: CAACAGGCTTCCTGGTAAGCCGAAGCAAACCAAGCACCAAGGTTCTGAAGAACTGCCCCGAGGAGAAAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | ACTCCAGGAACTCATGTCCAAAAGAGGGGATGTGTCTaGTGGCTGATCAAATGCTTGCCTTGCATGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TPGTHVQKRGCV*WLIKCLPCMGG Trigger: CCCACCCATGCAAGGCAAGCATTTGATCAGCCAGCAGACACATCCCCTCTTTTGGACATGAGTTCCTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | TTCGCATTTTCTCCTCGGGGCAGTTCTTCAGAACCTTaGTGCTTGGTTTGCTTCGGCTTACCAGGAAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FAFSPRGSSSEP*CLVCFGLPGSL Trigger: CAGGCTTCCTGGTAAGCCGAAGCAAACCAAGCACCAAGGTTCTGAAGAACTGCCCCGAGGAGAAAATGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | CCAGGAACTCATGTCCAAAAGAGGGGATGTGTCTGCTaGCTGATCAAATGCTTGCCTTGCATGGGTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGTHVQKRGCVC*LIKCLPCMGGK Trigger: CTTCCCACCCATGCAAGGCAAGCATTTGATCAGCCAGCAGACACATCCCCTCTTTTGGACATGAGTTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCCTGGGGACCAGGAATGCTCAAACCATCACTCCAGGAACTCATGTCCAAAATTCCATCAGCGACCCTaGGCTTCTGCTGGTTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DPGDQECSNHHSRNSCPKFHQRP*ASAGCL Trigger: TAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAA...TTTTGGACATGAGTTCCTGGAGTGATGGTTTGAGCATTCCTGGTCCCCAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAGGTCTCACACCCTGCTGGTGACATCTGGAACATCTGTGTCTTTGGGTGTTTCCATCAGCGACCCTaGGCTTCTGCTGGTTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LKVSHPAGDIWNICVFGCFHQRP*ASAGCL Trigger: TAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAA...ACACCCAAAGACACAGATGTTCCAGATGTCACCAGCAGGGTGTGAGACCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | TCTGTGAGCATGGTCTCGCTCTTTTTGTCCACCAGTTaGAGGTCTCACACCCTGCTGGTGACATCTGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SVSMVSLFLSTS*RSHTLLVTSGT Trigger: TGTTCCAGATGTCACCAGCAGGGTGTGAGACCTTCAACTGGTGGACAAAAAGAGCGAGACCATGCTCACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | ATAAGACCTCCTATGCTTGCCAGCCAGTCCCCTCTCTaGTCATACTGTTGCCAGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IRPPMLASQSPL*SYCCQCVCVCV Trigger: CACACACACACACACACACTGGCAACAGTATGATCAGAGAGGGGACTGGCTGGCAAGCATAGGAGGTCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | TTGGCATTAGGCTGTGGACCAAGACTTTCACATACCTaGAAGGCAGGCAAGCTCTGCGGTGTCCACTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LALGCGPRLSHT*KAGKLCGVHCQ Trigger: TTGACAGTGGACACCGCAGAGCTTGCCTGCCTTTCAGGTATGTGAAAGTCTTGGTCCACAGCCTAATGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATAGGGTTTCCCTGAAGGTGTCTGAAGGTGCTCCTGTGCAAATGCACATCCTTTTTGTCCACCAGTaGAAGGTCTCACACCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QNRVSLKVSEGAPVQMHILFVHQ*KVSHPA Trigger: AGCAGGGTGTGAGACCTTCAACTGGTGGACAAAAAG...GATGTGCATTTGCACAGGAGCACCTTCAGACACCTTCAGGGAAACCCTATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGTGTCACTCTCTGGAGGCTTCTGGTAAACTGCACCTCTCCTGAGTCGGTACAAACATCTCATTCCTaGTGGTCACTGCCTTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LSVTLWRLLVNCTSPESVQTSHS*WSLPLW Trigger: CCATAAAGGCAGTGACCACAAGGAATGAGATGTTTG...TACCGACTCAGGAGAGGTGCAGTTTACCAGAAGCCTCCAGAGAGTGACACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | CTTGGTTTGCTTCGGCTTACCAGGAAGCCTGTTGGGTaGGATCCTTCTTCCAAGACATTCTGTGAGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LGLLRLTRKPVG*DPSSKTFCEHG Trigger: ACCATGCTCACAGAATGTCTTGGAAGAAGGATCTCACCCAACAGGCTTCCTGGTAAGCCGAAGCAAACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAACCATCACTCCAGGAACTCATGTCCAAAAGAGGGGATGTGTCTGCTGGCAGGCCAGAGAGTCCTTaGGGATTAACTCTTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LKPSLQELMSKRGDVSAGRPESP*GLTLSI Trigger: AATGGAAAGAGTTAATCCCAAAGGACTCTCTGGCCT...GCCAGCAGACACATCCCCTCTTTTGGACATGAGTTCCTGGAGTGATGGTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | GCCTGTTGGGTGAGATCCTTCTTCCAAGACATTCTGTaGGCATGGTCTCGCTCTTTTTGTCCACCAGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ACWVRSFFQDIL*AWSRSFCPPVE Trigger: TTCAACTGGTGGACAAAAAGAGCGAGACCATGCTCACAGAATGTCTTGGAAGAAGGATCTCACCCAACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | ACTGTAGTTGGCTTTCCATCAGCGACCCTTGGCTTCTaGTGGTTGTCTACCTCAATGTCTGGATCCTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: TVVGFPSATLGF*WLSTSMSGSLI Trigger: TATCAAGGATCCAGACATTGAGGTAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAAAGCCAACTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | CTCCATGTCTGTGAAAGGACCCCAAAAAGCAGTGACTaGAAACAGCAAGTTTGCGACAACAGTTCTGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LHVCERTPKSSD*KQQVCDNSSVV Trigger: GACCACAGAACTGTTGTCGCAAACTTGCTGTTTCCAGTCACTGCTTTTTGGGGTCCTTTCACAGACATGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | GTAGTTGGCTTTCCATCAGCGACCCTTGGCTTCTGCTaGTTGTCTACCTCAATGTCTGGATCCTTGATATAC | + |
|
Preference number: 3 (lower is better) Translates to: VVGFPSATLGFC*LSTSMSGSLIY Trigger: GTATATCAAGGATCCAGACATTGAGGTAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAAAGCCAACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATAGGGTTTCCCTGAAGGTGTCTGAAGGTGCTCCTGTGCAAATGCACATCAGGCCAGAGAGTCCTTaGGGATTAACTCTTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: QNRVSLKVSEGAPVQMHIRPESP*GLTLSI Trigger: AATGGAAAGAGTTAATCCCAAAGGACTCTCTGGCCT...GATGTGCATTTGCACAGGAGCACCTTCAGACACCTTCAGGGAAACCCTATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | GCTTCTGCTGGTTGTCTACCTCAATGTCTGGATCCTTaGTATACTCTTCCTCCTCATAGGAAAGTGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ASAGCLPQCLDP*YTLPPHRKVWA Trigger: TGCCCACACTTTCCTATGAGGAGGAAGAGTATATCAAGGATCCAGACATTGAGGTAGACAACCAGCAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | ATATCAGACAAAGAGCAGTTTTCTCTGAGTGCAACCTaGTCATGTGTTCCTGACAGAGGCAGGATGGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: ISDKEQFSLSAT*SCVPDRGRMET Trigger: AGTCTCCATCCTGCCTCTGTCAGGAACACATGAGCAGGTTGCACTCAGAGAAAACTGCTCTTTGTCTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGTCAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTTGTCTCTCATCAGCTTaGCCCTGCCTCCTCCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GSQYCALCVSKLNLCVSICLSSA*PCLLPS Trigger: TGATGGGAGGAGGCAGGGCAAAGCTGATGAGAGACA...AATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTGACTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR TCA 72 bp | TTTTGTCCACCAGTTGAAGGTCTCACACCCTGCTGGTaGCATCTGGAACATCTGTGTCTTTGGGTGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FCPPVEGLTPCW*HLEHLCLWVFL Trigger: TAAAAACACCCAAAGACACAGATGTTCCAGATGTCACCAGCAGGGTGTGAGACCTTCAACTGGTGGACAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | ACAATTCAGACCATTCAAAATAAGACCTCCTATGCTTaGCAGCCAGTCCCCTCTCTGATCATACTGTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TIQTIQNKTSYA*QPVPSLIILLP Trigger: TGGCAACAGTATGATCAGAGAGGGGACTGGCTGGCAAGCATAGGAGGTCTTATTTTGAATGGTCTGAATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CCA 72 bp | TGTGTCCCTTTGGAGTCATTCTGTCAAATGTTAAGTTaGAAGCCTGGACACAGCCACCTTTATCATCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: CVPLESFCQMLS*KPGHSHLYHHL Trigger: GAGGTGATGATAAAGGTGGCTGTGTCCAGGCTTCCAACTTAACATTTGACAGAATGACTCCAAAGGGACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR GCA 72 bp | GAAGGAGTGAGTAGAAGGAGGTTCCCTTTCAGTTTCTaGTCTCCACTTCTTCAGAATTTTCTTCACAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: EGVSRRRFPFSF*SPLLQNFLHRI Trigger: GATTCTGTGAAGAAAATTCTGAAGAAGTGGAGAGCAGAAACTGAAAGGGAACCTCCTTCTACTCACTCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCCCACCGCTTTGCCCTCCCACTCCCGGGACCCCTCGTTTCCACTCCCATGCCCTGGAAACCCGTaGGGCCACCCAGGCAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSPTALPSHSRDPSFPLPCPGNP*GHPGNL Trigger: CAAGTTGCCTGGGTGGCCCCACGGGTTTCCAGGGCA...TGGGAGTGGAAACGAGGGGTCCCGGGAGTGGGAGGGCAAAGCGGTGGGGGAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | CATCACTGGCCGGCAGTGTGCTCCTGCCCTGGAAACCCGTGGGGCCACCCAGGCATCTCTGTCCACAATTaGAGGCCCAAATGGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HHWPAVCSCPGNPWGHPGISVHN*RPKWRG Trigger: CCCTCGCCATTTGGGCCTCCAATTGTGGACAGAGAT...GCCTGGGTGGCCCCACGGGTTTCCAGGGCAGGAGCACACTGCCGGCCAGTGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGGGACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATGGGTGTGCTTCACTGGCCGGCAGTGTaGTCCTGCCCTGGAAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: EMGQKPQQGSLPGLMGVLHWPAV*SCPGNP Trigger: CGGGTTTCCAGGGCAGGAGCACACTGCCGGCCAGTG...AAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR GCA 90 bp | CCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCACAACCTGGGGACCAGGAATaGTCAAACCATCACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLPGPLVSTPTTHGHSPQPGDQE*SNHHSR Trigger: CCTGGAGTGATGGTTTGAGCATTCCTGGTCCCCAGG...TTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCGGCAGTGTGCTCCTGCCCTGGAAACCCGTGGGGCCACCCAGGCAACTCCGGAGGATCCAAATTaGGAAGGAACACAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGRQCAPALETRGATQATPEDPN*EGTQNW Trigger: CCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGG...AGTTGCCTGGGTGGCCCCACGGGTTTCCAGGGCAGGAGCACACTGCCGGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
||
| CDS-3UTR GCA 90 bp | CCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCACAAATGGTGCCTCGAAGATaGTGTTCTGTGAGAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPGPLVSTPTTHGHSPQMVPRR*CSVRRG Trigger: GCCCCTTCTCACAGAACAGCATCTTCGAGGCACCAT...TTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR TCA 90 bp | CCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCACAATTCCCTGAAGGTGTCTaGAGGTGCTCCTGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLPGPLVSTPTTHGHSPQFPEGV*RCSCAN Trigger: ATTTGCACAGGAGCACCTTCAGACACCTTCAGGGAA...TTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | GAAATGGGACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATGGGTGTGCTTAATTGGAGGCCCAAATaGCGAGGGAACCATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EMGQKPQQGSLPGLMGVLNWRPK*RGNHWD Trigger: GTCCCAATGGTTCCCTCGCCATTTGGGCCTCCAATT...AAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| CDS-3UTR CCA 90 bp | GATCCCTGCCGGGCCTTATGGGTGTGCTTAGGAAGGTGTGTTTCTTTGGTTCAGGGCGGGAACTGTAGTTaGCTTTCCATCAGCGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPCRALWVCLGRCVSLVQGGNCS*LSISDP Trigger: AGGGTCGCTGATGGAAAGCCAACTACAGTTCCCGCC...CTGAACCAAAGAAACACACCTTCCTAAGCACACCCATAAGGCCCGGCAGGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | ACTGACGTAGAAATGGGACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATGAGGGGATGTGTCTGCTaGCTGATCAAATGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDVEMGQKPQQGSLPGLMRGCVC*LIKCLP Trigger: AGGCAAGCATTTGATCAGCCAGCAGACACATCCCCT...CATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTTCTACGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| 3UTR CAA 72 bp | GTTCAGAGGGCTTTCCCTTCCCATCATCCCATGCGTTaGCCTCCAGGGAAGACGGTTTCCTCTGGTGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VQRAFPSHHPMR*PPGKTVSSGVY Trigger: ATACACACCAGAGGAAACCGTCTTCCCTGGAGGCAAACGCATGGGATGATGGGAAGGGAAAGCCCTCTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| CDS-3UTR CCA 90 bp | TCCACTCCCACCACACATGGCCACAGTCCACAACTGAATTCATCCAAATCTCTGCTGACAGAGGCAGGATaGAGACTGGCCGGAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: STPTTHGHSPQLNSSKSLLTEAG*RLAGKP Trigger: GGGTTTTCCGGCCAGTCTCCATCCTGCCTCTGTCAG...CAGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGGAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCAGTGTTTCTCCATCAATCGCATGGTCCTTAAAGACCTGGGCATAGTCCAGCCTGTCCACAATTaGAGGCCCAAATGGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGQCFSINRMVLKDLGIVQPVHN*RPKWRG Trigger: CCCTCGCCATTTGGGCCTCCAATTGTGGACAGGCTG...GACTATGCCCAGGTCTTTAAGGACCATGCGATTGATGGAGAAACACTGCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
||
| 3UTR CAA 72 bp | TTTTCTCCTCGGGGCAGTTCTTCAGAACCTTGGTGCTaGGTTTGCTTCGGCTTACCAGGAAGCCTGTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPRGSSSEPWC*VCFGLPGSLLG Trigger: ACCCAACAGGCTTCCTGGTAAGCCGAAGCAAACCAAGCACCAAGGTTCTGAAGAACTGCCCCGAGGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGCATTAGGCTGTGGACCAAGACTTTCACATACCTGAAAGGCAGGCAAGCTCTGCTCATGTGTTCCTaGCAGAGGCAGGATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGIRLWTKTFTYLKGRQALLMCS*QRQDGD Trigger: GTCTCCATCCTGCCTCTGTCAGGAACACATGAGCAG...AGCTTGCCTGCCTTTCAGGTATGTGAAAGTCTTGGTCCACAGCCTAATGCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | GATCCCTGCCGGGCCTTATGGGTGTGCTTAGGAAGGTGTGTTTCTTTGGTTCAGCTCAGTGTCACTCTCTaGAGGCTTCTGGTAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPCRALWVCLGRCVSLVQLSVTL*RLLVNC Trigger: GCAGTTTACCAGAAGCCTCCAGAGAGTGACACTGAG...CTGAACCAAAGAAACACACCTTCCTAAGCACACCCATAAGGCCCGGCAGGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGGCCCCAACTTGAGTCCCATGGTGCCTCGAAGATGCTGTTCTGTGAGAAGACCATTGGGACCTTCTaGTGTCCTGATGTCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CWPQLESHGASKMLFCEKTIGTF*CPDVSK Trigger: TTTACTGACATCAGGACAGCAGAAGGTCCCAATGGT...CTTCTCACAGAACAGCATCTTCGAGGCACCATGGGACTCAAGTTGGGGCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGGGACCAGGAATGCTCAAACCATCACTCCAGGAACTCATGTCCAAAAAATTGGAGGCCCAAATaGCGAGGGAACCATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPGDQECSNHHSRNSCPKNWRPK*RGNHWD Trigger: GTCCCAATGGTTCCCTCGCCATTTGGGCCTCCAATT...TTTTGGACATGAGTTCCTGGAGTGATGGTTTGAGCATTCCTGGTCCCCAGGATC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| 3UTR CAA 72 bp | TTCTGTGAGCATGGTCTCGCTCTTTTTGTCCACCAGTaGAAGGTCTCACACCCTGCTGGTGACATCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FCEHGLALFVHQ*KVSHPAGDIWN Trigger: GTTCCAGATGTCACCAGCAGGGTGTGAGACCTTCAACTGGTGGACAAAAAGAGCGAGACCATGCTCACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CAA 72 bp | TGGTGCTTGGTTTGCTTCGGCTTACCAGGAAGCCTGTaGGGTGAGATCCTTCTTCCAAGACATTCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WCLVCFGLPGSL*GEILLPRHSVS Trigger: GCTCACAGAATGTCTTGGAAGAAGGATCTCACCCAACAGGCTTCCTGGTAAGCCGAAGCAAACCAAGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CAA 72 bp | ATTCGCATTTTCTCCTCGGGGCAGTTCTTCAGAACCTaGGTGCTTGGTTTGCTTCGGCTTACCAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IRIFSSGQFFRT*VLGLLRLTRKP Trigger: AGGCTTCCTGGTAAGCCGAAGCAAACCAAGCACCAAGGTTCTGAAGAACTGCCCCGAGGAGAAAATGCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CAA 72 bp | TATGCTTGCCAGCCAGTCCCCTCTCTGATCATACTGTaGCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YACQPVPSLIIL*PVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACTGGCAACAGTATGATCAGAGAGGGGACTGGCTGGCAAGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CAA 72 bp | CGGGCCTTATGGGTGTGCTTAGGAAGGTGTGTTTCTTaGGTTCAGCACACTGTAGGGGAGGGGTATACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RALWVCLGRCVS*VQHTVGEGYTK Trigger: CTTTGTATACCCCTCCCCTACAGTGTGCTGAACCAAAGAAACACACCTTCCTAAGCACACCCATAAGGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| 3UTR CAA 72 bp | AGGCTTGGCAGAGAGCCTGGACTAAGGTCTTGTGAGTaGGCATTAGGCTGTGGACCAAGACTTTCACATACC | + |
|
Preference number: 4 (lower is better) Translates to: RLGREPGLRSCE*ALGCGPRLSHT Trigger: GGTATGTGAAAGTCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGGCTCTCTGCCAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| CDS-3UTR GCA 90 bp | TCCACTCCCACCACACATGGCCACAGTCCACAACTGAATTCATCCAAATCTCTGAGGCTTCTGGTAAACTaGACCTCTCCTGAGTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: STPTTHGHSPQLNSSKSLRLLVN*TSPESV Trigger: TACCGACTCAGGAGAGGTGCAGTTTACCAGAAGCCT...CAGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGGAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAAGCACCCTCGACAATGGGTGGGCTATCTTAAAGGCTTTCTGCTAGGGCCGGAGGATCCAAATTaGGAAGGAACACAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGKHPRQWVGYLKGFLLGPEDPN*EGTQNW Trigger: CCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGG...CCCTAGCAGAAAGCCTTTAAGATAGCCCACCCATTGTCGAGGGTGCTTGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | AGTCCCATGGTGCCTCGAAGATGCTGTTCTGTGAGAAGGGGCAGTGTTTCTCCATGGTCACTGCCTTTATaGGTTCAGGTGGTAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPMVPRRCCSVRRGSVSPWSLPL*VQVVKC Trigger: GCATTTTACCACCTGAACCCATAAAGGCAGTGACCA...TGGAGAAACACTGCCCCTTCTCACAGAACAGCATCTTCGAGGCACCATGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
||
| CDS-3UTR TCA 90 bp | CCCACCACACATGGCCACAGTCCACAACTGAATTCATCCAAATCTCTGTTTGCTGATGTGTCTGCTGGCTaGTCAAATGCTTGCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTHGHSPQLNSSKSLFADVSAG*SNACLA Trigger: TGCAAGGCAAGCATTTGATCAGCCAGCAGACACATC...AGCAAACAGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR GCA 90 bp | ACTCATGTCCAAAAGAGGGGATGTGTCTGCTGGCTGATCAAATGCTTGCCTTGCGTTCAGGTGGTAAAATaGCCCAGCCTGAGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: THVQKRGCVCWLIKCLPCVQVVK*PSLSRS Trigger: ACTTCTACTCAGGCTGGGGCATTTTACCACCTGAAC...GCAAGGCAAGCATTTGATCAGCCAGCAGACACATCCCCTCTTTTGGACATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGTGTGTTTCTTTGGTTCAGCACACTGTAGGGGAGGGGTATACAAAGGCAGCAGTTTTCTCTGAGTaGAACCTGCTCATGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRCVSLVQHTVGEGYTKAAVFSE*NLLMCS Trigger: GGAACACATGAGCAGGTTGCACTCAGAGAAAACTGC...TGCCTTTGTATACCCCTCCCCTACAGTGTGCTGAACCAAAGAAACACACCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | TGTAGGGGAGGGGTATACAAAGGCAAGCACCCTCGACAATGGGTGGGCTATCTTAACACAAAACTGGCTTaGGTCAGTTGGAGCTATACT | + |
|
Preference number: 4 (lower is better) Translates to: CRGGVYKGKHPRQWVGYLNTKLA*VSWSYT Trigger: AGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTT...AAGATAGCCCACCCATTGTCGAGGGTGCTTGCCTTTGTATACCCCTCCCCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGACTAAGGTCTTGTGAGTTGGCATTAGGCTGTGGACCAAGACTTTCACATGAAGACGGTTTCCTCTaGTGTGTATGGAGTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGLRSCELALGCGPRLSHEDGFL*CVWSSP Trigger: CGGAGAACTCCATACACACCAGAGGAAACCGTCTTC...ATGTGAAAGTCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| 3UTR CAA 72 bp | CACCTTTATCATCACCTCTCTCTCACTAGTTCCAACTaGTTACACACAGATAACTTTCCCCCTCCCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLYHHLSLTSSN*LHTDNFPPPLR Trigger: CCGGAGGGGAGGGGGAAAGTTATCTGTGTGTAACAAGTTGGAACTAGTGAGAGAGAGGTGATGATAAAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGGTCTCACACCCTGCTGGTGACATCTGGAACATCTGTGTCTTTGGGTGTACCATTGGGACCTTCTaGTGTCCTGATGTCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKVSHPAGDIWNICVFGCTIGTF*CPDVSK Trigger: TTTACTGACATCAGGACAGCAGAAGGTCCCAATGGT...ACACCCAAAGACACAGATGTTCCAGATGTCACCAGCAGGGTGTGAGACCTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCACACATGGCCACAGTCCACAACTGAATTCATCCAAATCTCTGTTTGCTAAGAGGGGATGTGTCTaGTGGCTGATCAAATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTTHGHSPQLNSSKSLFAKRGCV*WLIKCL Trigger: CAAGCATTTGATCAGCCAGCAGACACATCCCCTCTT...AGCAAACAGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | CTCAAACCATCACTCCAGGAACTCATGTCCAAAAGAGGGGATGTGTCTGCTGGCAACACAAAACTGGCTTaGGTCAGTTGGAGCTATACT | + |
|
Preference number: 4 (lower is better) Translates to: LKPSLQELMSKRGDVSAGNTKLA*VSWSYT Trigger: AGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTT...GCCAGCAGACACATCCCCTCTTTTGGACATGAGTTCCTGGAGTGATGGTTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTGTGTTTCTTTGGTTCAGCACACTGTAGGGGAGGGGTATACAAAGGCATTTCCATTTCTGCCCTaGCAGCGTGATGTCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRCVSLVQHTVGEGYTKAFPFLP*QRDVFQ Trigger: TTGAAAGACATCACGCTGCCAGGGCAGAAATGGAAA...TGCCTTTGTATACCCCTCCCCTACAGTGTGCTGAACCAAAGAAACACACCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR TCA 90 bp | GGAAGGTGTGTTTCTTTGGTTCAGCACACTGTAGGGGAGGGGTATACAAAGGCACTTCTGCTTGACTTTTaGAACTCTCAGTGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRCVSLVQHTVGEGYTKALLLDF*NSQCHS Trigger: AGAGTGACACTGAGAGTTTCAAAAGTCAAGCAGAAG...TGCCTTTGTATACCCCTCCCCTACAGTGTGCTGAACCAAAGAAACACACCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | ACCCTGCTGGTGACATCTGGAACATCTGTGTCTTTGGGTGTTTTTAATTTCTCAAATTGGAGGCCCAAATaGCGAGGGAACCATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLVTSGTSVSLGVFNFSNWRPK*RGNHWD Trigger: GTCCCAATGGTTCCCTCGCCATTTGGGCCTCCAATT...TGAGAAATTAAAAACACCCAAAGACACAGATGTTCCAGATGTCACCAGCAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGACTAAGGTCTTGTGAGTTGGCATTAGGCTGTGGACCAAGACTTTCACATTGGTCACTGCCTTTATaGGTTCAGGTGGTAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLRSCELALGCGPRLSHWSLPL*VQVVKC Trigger: GCATTTTACCACCTGAACCCATAAAGGCAGTGACCA...ATGTGAAAGTCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| 3UTR CAA 72 bp | GTGTGTCCCTTTGGAGTCATTCTGTCAAATGTTAAGTaGGAAGCCTGGACACAGCCACCTTTATCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VCPFGVILSNVK*EAWTQPPLSSP Trigger: AGGTGATGATAAAGGTGGCTGTGTCCAGGCTTCCAACTTAACATTTGACAGAATGACTCCAAAGGGACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| CDS-3UTR TCA 90 bp | ACAACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACGACCTGGGCATAGTCTaGGCAGCCTGGAAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEFIQISVCSFQFQSLNDLGIV*AAWKAS Trigger: AGAAGCCTTCCAGGCTGCTCAGACTATGCCCAGGTC...GTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGTCAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTATCTCTGTCCACAATTaGAGGCCCAAATGGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQYCALCVSKLNLCVSIISVHN*RPKWRG Trigger: CCCTCGCCATTTGGGCCTCCAATTGTGGACAGAGAT...AATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTGACTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR GCA 90 bp | ACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCATGCTGGCTGATCAAATaGTTGCCTTGCATGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TEFIQISVCSFQFQSLNPCWLIK*LPCMGG Trigger: CCCACCCATGCAAGGCAAGCATTTGATCAGCCAGCA...TGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR TCA 90 bp | GGGAGTCAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTAAGAGCAGTTTTCTCTaGGTGCAACCTGCTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSQYCALCVSKLNLCVSIKSSFL*VQPAHV Trigger: CACATGAGCAGGTTGCACTCAGAGAAAACTGCTCTT...AATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTGACTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR GCA 90 bp | ACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCAGTTCAGGTGGTAAAATaGCCCAGCCTGAGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TEFIQISVCSFQFQSLNPVQVVK*PSLSRS Trigger: ACTTCTACTCAGGCTGGGGCATTTTACCACCTGAAC...TGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR GCA 90 bp | ACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCAACCATTGGGACCTTCTaGTGTCCTGATGTCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEFIQISVCSFQFQSLNPTIGTF*CPDVSK Trigger: TTTACTGACATCAGGACAGCAGAAGGTCCCAATGGT...TGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000174395.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCAATACATTTCCATTTCTaGCCTGGCAGCGTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEFIQISVCSFQFQSLNPIHFHF*PGSVMS Trigger: AGACATCACGCTGCCAGGGCAGAAATGGAAATGTAT...TGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR TCA 90 bp | ACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCACAATGTCTGGATCCTTaGTATACTCTTCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEFIQISVCSFQFQSLNPQCLDP*YTLPPH Trigger: ATGAGGAGGAAGAGTATATCAAGGATCCAGACATTG...TGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CAA 90 bp | CATCACTGGCCGGCAGTGTGCTCCTGCCCTGGAAACCCGTGGGGCCACCCAGGCACCGGAGGATCCAAATaGGGAAGGAACACAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: HHWPAVCSCPGNPWGHPGTGGSK*GRNTKL Trigger: CAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGGT...GCCTGGGTGGCCCCACGGGTTTCCAGGGCAGGAGCACACTGCCGGCCAGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
||
| CDS-3UTR CAA 90 bp | CATCACTGGCCGGCAGTGTGCTCCTGCCCTGGAAACCCGTGGGGCCACCCAGGCCAAACATCTCATTCCTaGTGGTCACTGCCTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: HHWPAVCSCPGNPWGHPGQTSHS*WSLPLW Trigger: CCATAAAGGCAGTGACCACAAGGAATGAGATGTTTG...GCCTGGGTGGCCCCACGGGTTTCCAGGGCAGGAGCACACTGCCGGCCAGTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
||
| CDS-3UTR CAA 90 bp | CCACTCCCGGGACCCCTCGTTTCCACTCCCACCACACATGGCCACAGTCCACAATGGCTGATCAAATGCTaGCCTTGCATGGGTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLPGPLVSTPTTHGHSPQWLIKC*PCMGGK Trigger: CTTCCCACCCATGCAAGGCAAGCATTTGATCAGCCA...TTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTCCCGGGAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CAA 90 bp | GAAATGGGACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATGGGTGTGCTTCATCTCTGTCCACAATaGGAGGCCCAAATGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EMGQKPQQGSLPGLMGVLHLCPQ*EAQMAR Trigger: CCTCGCCATTTGGGCCTCCAATTGTGGACAGAGATG...AAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
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| CDS-3UTR CAA 90 bp | CTCAAACCATCACTCCAGGAACTCATGTCCAAAAGAGGGGATGTGTCTGCTGGCCCAGCCTGTCCACAATaGGAGGCCCAAATGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKPSLQELMSKRGDVSAGPACPQ*EAQMAR Trigger: CCTCGCCATTTGGGCCTCCAATTGTGGACAGGCTGG...GCCAGCAGACACATCCCCTCTTTTGGACATGAGTTCCTGGAGTGATGGTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174395.8 |
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| CDS-3UTR CAA 90 bp | AGTCCCATGGTGCCTCGAAGATGCTGTTCTGTGAGAAGGGGCAGTGTTTCTCCAACTGGCTTGGGTCAGTaGGAGCTATACTGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SPMVPRRCCSVRRGSVSPTGLGQ*ELYWKT Trigger: TGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGT...TGGAGAAACACTGCCCCTTCTCACAGAACAGCATCTTCGAGGCACCATGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
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| CDS-3UTR CAA 90 bp | CAGAATAGGGTTTCCCTGAAGGTGTCTGAAGGTGCTCCTGTGCAAATGCACATCGCGGGTTTGGCATATTaGCATTTGGGAGACCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QNRVSLKVSEGAPVQMHIAGLAY*HLGDRR Trigger: CCTCCGGTCTCCCAAATGCAAATATGCCAAACCCGC...GATGTGCATTTGCACAGGAGCACCTTCAGACACCTTCAGGGAAACCCTATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
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| CDS-3UTR CAA 90 bp | AAAGGCAAGCACCCTCGACAATGGGTGGGCTATCTTAAAGGCTTTCTGCTAGGGTTCCATCAGCGACCCTaGGCTTCTGCTGGTTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: KGKHPRQWVGYLKGFLLGFHQRP*ASAGCL Trigger: TAGACAACCAGCAGAAGCCAAGGGTCGCTGATGGAA...CCCTAGCAGAAAGCCTTTAAGATAGCCCACCCATTGTCGAGGGTGCTTGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
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| CDS-3UTR CAA 90 bp | CCCATAGAAGAGTGGTATTCCCAGGCCAGAGAGTCCTTTGGGATTAACTCTTTCCATCTCTGTCCACAATaGGAGGCCCAAATGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIEEWYSQARESFGINSFHLCPQ*EAQMAR Trigger: CCTCGCCATTTGGGCCTCCAATTGTGGACAGAGATG...GAAAGAGTTAATCCCAAAGGACTCTCTGGCCTGGGAATACCACTCTTCTATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
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| CDS GCA 90 bp | TCCACAATTGGAGGCCCAAATGGCGAGGGAACCATTGGGACCTTCTaGTGTCCTGATGTCAGTAAAGAGCTCACAGACATCATTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: STIGGPNGEGTIGTF*CPDVSKELTDIIGF Trigger: AAACCCAATGATGTCTGTGAGCTCTTTACTGACATCAGGACAGCAGAAGGTCCCAATGGTTCCCTCGCCATTTGGGCCTCCAATTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 ENSMUST00000174395.8 |
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| CDS CCA 90 bp | TGGGAGACCGGAGGATCCAAATTGGGAAGGAACACAAAACTGGCTTaGGTCAGTTGGAGCTATACTGGAAGACAAGACATCTCTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WETGGSKLGRNTKLA*VSWSYTGRQDISVH Trigger: GTGGACAGAGATGTCTTGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGGTCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CCA 90 bp | TTTCTGCCCTGGCAGCGTGATGTCTTTCAAACATCTCATTCCTTGTaGTCACTGCCTTTATGGGTTCAGGTGGTAAAATGCCCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLPWQRDVFQTSHSL*SLPLWVQVVKCPSL Trigger: CAGGCTGGGGCATTTTACCACCTGAACCCATAAAGGCAGTGACCACAAGGAATGAGATGTTTGAAAGACATCACGCTGCCAGGGCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
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| CDS-3UTR CAA 90 bp | GAAATGGGACAGAAGCCACAGCAGGGATCCCTGCCGGGCCTTATGGGTGTGCTTATTTCTCATAACGTCTaGCTCAGTTCTTTTAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: EMGQKPQQGSLPGLMGVLISHNV*LSSFRT Trigger: AGTCCTAAAAGAACTGAGCAAGACGTTATGAGAAAT...AAGCACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS GCA 90 bp | TCTCATTCCTTGTGGTCACTGCCTTTATGGGTTCAGGTGGTAAAATaGCCCAGCCTGAGTAGAAGTGACTGGATAGCGGGTTTGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: SHSLWSLPLWVQVVK*PSLSRSDWIAGLAY Trigger: ATATGCCAAACCCGCTATCCAGTCACTTCTACTCAGGCTGGGGCATTTTACCACCTGAACCCATAAAGGCAGTGACCACAAGGAATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
||
| CDS CCA 90 bp | AGCGGGTTTGGCATATTTGCATTTGGGAGACCGGAGGATCCAAATTaGGAAGGAACACAAAACTGGCTTGGGTCAGTTGGAGCTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGFGIFAFGRPEDPN*EGTQNWLGSVGAIL Trigger: CAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGGTCTCCCAAATGCAAATATGCCAAACCCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAAGCACCCTCGACAATGGGTGGGCTATCTTAAAGGCTTTCTGCTAGGGCAAACATCTCATTCCTaGTGGTCACTGCCTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: KGKHPRQWVGYLKGFLLGQTSHS*WSLPLW Trigger: CCATAAAGGCAGTGACCACAAGGAATGAGATGTTTG...CCCTAGCAGAAAGCCTTTAAGATAGCCCACCCATTGTCGAGGGTGCTTGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS CCA 90 bp | GGAGGATCCAAATTGGGAAGGAACACAAAACTGGCTTGGGTCAGTTaGAGCTATACTGGAAGACAAGACATCTCTGTCCACAATTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSKLGRNTKLAWVS*SYTGRQDISVHNWR Trigger: CCTCCAATTGTGGACAGAGATGTCTTGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
||
| CDS CCA 90 bp | CGTGATGTCTTTCAAACATCTCATTCCTTGTGGTCACTGCCTTTATaGGTTCAGGTGGTAAAATGCCCCAGCCTGAGTAGAAGTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RDVFQTSHSLWSLPL*VQVVKCPSLSRSDW Trigger: CCAGTCACTTCTACTCAGGCTGGGGCATTTTACCACCTGAACCCATAAAGGCAGTGACCACAAGGAATGAGATGTTTGAAAGACATCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
||
| CDS-3UTR CAA 90 bp | CCCACCACACATGGCCACAGTCCACAACTGAATTCATCCAAATCTCTGTTTGCTACCGGAGGATCCAAATaGGGAAGGAACACAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTHGHSPQLNSSKSLFATGGSK*GRNTKL Trigger: CAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGGT...AGCAAACAGAGATTTGGATGAATTCAGTTGTGGACTGTGGCCATGTGTGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CAA 90 bp | GTTGGCATTAGGCTGTGGACCAAGACTTTCACATACCTGAAAGGCAGGCAAGCTAGGCCAGAGAGTCCTTaGGGATTAACTCTTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VGIRLWTKTFTYLKGRQARPESP*GLTLSI Trigger: AATGGAAAGAGTTAATCCCAAAGGACTCTCTGGCCT...AGCTTGCCTGCCTTTCAGGTATGTGAAAGTCTTGGTCCACAGCCTAATGCCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGTCAGTACTGTGCTCTCTGTGTCAGTAAGTTAAATCTATGTGTTTCAATTGCGGGTTTGGCATATTaGCATTTGGGAGACCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSQYCALCVSKLNLCVSIAGLAY*HLGDRR Trigger: CCTCCGGTCTCCCAAATGCAAATATGCCAAACCCGC...AATTGAAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTGACTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CAA 90 bp | ATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCACACTAACTGGCTTGGGTCAGTaGGAGCTATACTGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: IHPNLCLLFPVSKSKPTLTGLGQ*ELYWKT Trigger: TGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGT...TAGTGTGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS-3UTR CAA 90 bp | ACTGAATTCATCCAAATCTCTGTTTGCTCTTTCCAGTTTCAAAGTCTAAACCCAGAACACAAAACTGGCTaGGGTCAGTTGGAGCTATAC | + |
|
Preference number: 5 (lower is better) Translates to: TEFIQISVCSFQFQSLNPEHKTG*GQLELY Trigger: GTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTC...TGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGAATTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
||
| CDS GCA 72 bp | GGAGGCCCAAATGGCGAGGGAACCATTGGGACCTTCTaGTGTCCTGATGTCAGTAAAGAGCTCACAGACATC | + |
|
Preference number: 6 (lower is better) Translates to: GGPNGEGTIGTF*CPDVSKELTDI Trigger: GATGTCTGTGAGCTCTTTACTGACATCAGGACAGCAGAAGGTCCCAATGGTTCCCTCGCCATTTGGGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 ENSMUST00000174395.8 |
||
| CDS CAA 72 bp | TGCCCCAGCCTGAGTAGAAGTGACTGGATAGCGGGTTaGGCATATTTGCATTTGGGAGACCGGAGGATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CPSLSRSDWIAG*AYLHLGDRRIQ Trigger: TTGGATCCTCCGGTCTCCCAAATGCAAATATGCCAAACCCGCTATCCAGTCACTTCTACTCAGGCTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
||
| CDS GCA 72 bp | TTGTGGTCACTGCCTTTATGGGTTCAGGTGGTAAAATaGCCCAGCCTGAGTAGAAGTGACTGGATAGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LWSLPLWVQVVK*PSLSRSDWIAG Trigger: ACCCGCTATCCAGTCACTTCTACTCAGGCTGGGGCATTTTACCACCTGAACCCATAAAGGCAGTGACCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 72 bp | GAGCTATACTGGAAGACAAGACATCTCTGTCCACAATaGGAGGCCCAAATGGCGAGGGAACCATTGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: ELYWKTRHLCPQ*EAQMAREPLGP Trigger: AGGTCCCAATGGTTCCCTCGCCATTTGGGCCTCCAATTGTGGACAGAGATGTCTTGTCTTCCAGTATAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 90 bp | CCATTTCTGCCCTGGCAGCGTGATGTCTTTCAAACATCTCATTCCTaGTGGTCACTGCCTTTATGGGTTCAGGTGGTAAAATGCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PFLPWQRDVFQTSHS*WSLPLWVQVVKCPS Trigger: GCTGGGGCATTTTACCACCTGAACCCATAAAGGCAGTGACCACAAGGAATGAGATGTTTGAAAGACATCACGCTGCCAGGGCAGAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
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| CDS CCA 72 bp | AGCTATACTGGAAGACAAGACATCTCTGTCCACAATTaGAGGCCCAAATGGCGAGGGAACCATTGGGACCTT | + |
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Preference number: 6 (lower is better) Translates to: SYTGRQDISVHN*RPKWRGNHWDL Trigger: AAGGTCCCAATGGTTCCCTCGCCATTTGGGCCTCCAATTGTGGACAGAGATGTCTTGTCTTCCAGTATAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CCA 72 bp | CAGGTGGTAAAATGCCCCAGCCTGAGTAGAAGTGACTaGATAGCGGGTTTGGCATATTTGCATTTGGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: QVVKCPSLSRSD*IAGLAYLHLGD Trigger: GTCTCCCAAATGCAAATATGCCAAACCCGCTATCCAGTCACTTCTACTCAGGCTGGGGCATTTTACCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 90 bp | TTGGGAGACCGGAGGATCCAAATTGGGAAGGAACACAAAACTGGCTaGGGTCAGTTGGAGCTATACTGGAAGACAAGACATCTCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGDRRIQIGKEHKTG*GQLELYWKTRHLCP Trigger: TGGACAGAGATGTCTTGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGGTCTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 90 bp | AGCCTGAGTAGAAGTGACTGGATAGCGGGTTTGGCATATTTGCATTaGGGAGACCGGAGGATCCAAATTGGGAAGGAACACAAAACTGGC | + |
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Preference number: 6 (lower is better) Translates to: SLSRSDWIAGLAYLH*GDRRIQIGKEHKTG Trigger: GCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGGTCTCCCAAATGCAAATATGCCAAACCCGCTATCCAGTCACTTCTACTCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CCA 72 bp | GAACACAAAACTGGCTTGGGTCAGTTGGAGCTATACTaGAAGACAAGACATCTCTGTCCACAATTGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: EHKTGLGQLELY*KTRHLCPQLEA Trigger: GGCCTCCAATTGTGGACAGAGATGTCTTGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 72 bp | TGGCATATTTGCATTTGGGAGACCGGAGGATCCAAATaGGGAAGGAACACAAAACTGGCTTGGGTCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WHICIWETGGSK*GRNTKLAWVSW Trigger: CCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCGGTCTCCCAAATGCAAATATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 72 bp | AGAAGTGACTGGATAGCGGGTTTGGCATATTTGCATTaGGGAGACCGGAGGATCCAAATTGGGAAGGAACAC | + |
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Preference number: 6 (lower is better) Translates to: RSDWIAGLAYLH*GDRRIQIGKEH Trigger: GTGTTCCTTCCCAATTTGGATCCTCCGGTCTCCCAAATGCAAATATGCCAAACCCGCTATCCAGTCACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 72 bp | CTGAGTAGAAGTGACTGGATAGCGGGTTTGGCATATTaGCATTTGGGAGACCGGAGGATCCAAATTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSRSDWIAGLAY*HLGDRRIQIGK Trigger: CTTCCCAATTTGGATCCTCCGGTCTCCCAAATGCAAATATGCCAAACCCGCTATCCAGTCACTTCTACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 90 bp | CGGAGGATCCAAATTGGGAAGGAACACAAAACTGGCTTGGGTCAGTaGGAGCTATACTGGAAGACAAGACATCTCTGTCCACAATTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RRIQIGKEHKTGLGQ*ELYWKTRHLCPQLE Trigger: CTCCAATTGTGGACAGAGATGTCTTGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CCA 72 bp | GGAGGATCCAAATTGGGAAGGAACACAAAACTGGCTTaGGTCAGTTGGAGCTATACTGGAAGACAAGACATC | + |
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Preference number: 6 (lower is better) Translates to: GGSKLGRNTKLA*VSWSYTGRQDI Trigger: GATGTCTTGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 72 bp | CGGAGGATCCAAATTGGGAAGGAACACAAAACTGGCTaGGGTCAGTTGGAGCTATACTGGAAGACAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: RRIQIGKEHKTG*GQLELYWKTRH Trigger: ATGTCTTGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTTGGATCCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 72 bp | CCCTGGCAGCGTGATGTCTTTCAAACATCTCATTCCTaGTGGTCACTGCCTTTATGGGTTCAGGTGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: PWQRDVFQTSHS*WSLPLWVQVVK Trigger: TTTTACCACCTGAACCCATAAAGGCAGTGACCACAAGGAATGAGATGTTTGAAAGACATCACGCTGCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108262.10 |
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| CDS CCA 72 bp | AAATTGGGAAGGAACACAAAACTGGCTTGGGTCAGTTaGAGCTATACTGGAAGACAAGACATCTCTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: KLGRNTKLAWVS*SYTGRQDISVH Trigger: GTGGACAGAGATGTCTTGTCTTCCAGTATAGCTCCAACTGACCCAAGCCAGTTTTGTGTTCCTTCCCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CCA 72 bp | TTTCAAACATCTCATTCCTTGTGGTCACTGCCTTTATaGGTTCAGGTGGTAAAATGCCCCAGCCTGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: FQTSHSLWSLPL*VQVVKCPSLSR Trigger: TCTACTCAGGCTGGGGCATTTTACCACCTGAACCCATAAAGGCAGTGACCACAAGGAATGAGATGTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108262.10 ENSMUST00000172593.2 |
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| CDS CAA 72 bp | TCCTGGCAGCGTGATGTCTTTCAAACATCTCATTCCTaGTGGTCACTGCCTTTATGGGTTCAGGTGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: SWQRDVFQTSHS*WSLPLWVQVVK Trigger: TTTTACCACCTGAACCCATAAAGGCAGTGACCACAAGGAATGAGATGTTTGAAAGACATCACGCTGCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172593.2 |
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