Pregenerated sensors for SAMD15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090812Ensembl transcript IDs: ENSMUST00000169669.2, ENSMUST00000182869.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTaGGTGACCCCAGATCAGCAGCATTGCTGTCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: GHQAQAVQHTEV*VTPDQQHCCQA Trigger: GGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| 3UTR TCA 72 bp | ATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTaGCCCCAGATCAGCAGCATTGCTGTCAAGCCACAC | + |
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Preference number: 3 (lower is better) Translates to: IRPRQFNTQKCG*PQISSIAVKPH Trigger: GTGTGGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| 3UTR TCA 72 bp | AGAATCATTGCAATCAGACTAAGACATGCTCTTATCTaGTGTAGGCCAGGGGTCATCAGGCCCAGGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: RIIAIRLRHALI*CRPGVIRPRQF Trigger: GAACTGCCTGGGCCTGATGACCCCTGGCCTACATCAGATAAGAGCATGTCTTAGTCTGATTGCAATGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATGCTCAGGTTGCTCTGTaGCTGACTGCTCTGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: RGHQAQAVQHTEVWVTPDAQVAL*LTALWT Trigger: AGTCCACAGAGCAGTCAGGCACAGAGCAACCTGAGC...ATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | CAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATGCACCAAATCCCCCTTaGGTGTCCTGGTTGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: QAQAVQHTEVWVTPDQQHAPNPP*VSWLAL Trigger: TAGAGCCAACCAGGACACGCAAGGGGGATTTGGTGC...ATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | GCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCCCACTGTGCCCTTTCTaGTCAAAGAACAAGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AQAVQHTEVWVTPDQQHCPLCPF*SKNKPL Trigger: CAAGGGCTTGTTCTTTGAGCAGAAAGGGCACAGTGG...GCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | AGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATTCGTTCATGTCAGTCTaGAGGTCTTTGAGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: RGHQAQAVQHTEVWVTPDSFMSV*RSLRNS Trigger: GGAGTTCCTCAAAGACCTTCAGACTGACATGAACGA...ATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | GTAGGCCAGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACGTGAGGTTTGAGATCTaGTTCCTCAGTAGACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VGQGSSGPGSSTHRSVGDVRFEI*FLSRLP Trigger: AGGAAGTCTACTGAGGAAGCAGATCTCAAACCTCAC...GTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCTGGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | TTATCTGATGTAGGCCAGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTAGGTTGCTCTGTGCCTaGCTGCTCTGTGGACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LSDVGQGSSGPGSSTHRSRLLCA*LLCGLE Trigger: TTCAAGTCCACAGAGCAGTCAGGCACAGAGCAACCT...ACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCTGGCCTACATCAGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | GCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAACTCAGCTTGTGCTTTTaGGCTGATGGTTTCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: AVQHTEVWVTPDQQHCCQLSLCF*ADGFRS Trigger: GGACCGGAAACCATCAGCTCAAAAGCACAAGCTGAG...TTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATGCTGTTTTCTGGCAGTaGGTCTTCTTTCTTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RGHQAQAVQHTEVWVTPDAVFWQ*VFFLFL Trigger: GAGGAAAAGAAAGAAGACGCACTGCCAGAAAACAGC...ATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CCA 90 bp | AGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATATCAGTTATCTGCTGTaGCTTGTCACCCGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGHQAQAVQHTEVWVTPDISYLL*LVTRFL Trigger: GAGAAAACGGGTGACAAGCCACAGCAGATAACTGAT...ATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CCA 90 bp | CAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGCCACAAGTAGCTCCACCTCCTaGGGTAACACTGTAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: QHTEVWVTPDQQHCCQATSSSTS*GNTVES Trigger: GGATTCTACAGTGTTACCCCAGGAGGTGGAGCTACT...TGTGGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCAAGATGCTCAAACTCTaGGGTAAGACTTGGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: AQAVQHTEVWVTPDQQHCKMLKL*GKTWLG Trigger: ACCAAGCCAAGTCTTACCCCAGAGTTTGAGCATCTT...GCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | GCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAACAGTCTGAAGGTCTTTaGGGAACTCCTGGGTTTCGT | + |
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Preference number: 4 (lower is better) Translates to: AVQHTEVWVTPDQQHCCQQSEGL*GTPGFR Trigger: ACGAAACCCAGGAGTTCCTCAAAGACCTTCAGACTG...TTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | GCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAATTAGTCTGCTCAGGTTaGTCTGTGCCTGACTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: AVQHTEVWVTPDQQHCCQLVCSG*SVPDCS Trigger: AGAGCAGTCAGGCACAGAGCAACCTGAGCAGACTAA...TTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | TTATCTGATGTAGGCCAGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTTCTGTGGACTTGAAGTaGGGTTTGAGATCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSDVGQGSSGPGSSTHRSSVDLK*GLRSAS Trigger: GGAAGCAGATCTCAAACCTCACTTCAAGTCCACAGA...ACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCTGGCCTACATCAGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | GCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGGCTGCGACTTCTCTTaGATGTCTGGATCAGTTATC | + |
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Preference number: 4 (lower is better) Translates to: AVQHTEVWVTPDQQHCCQGCDFS*MSGSVI Trigger: GATAACTGATCCAGACATTCAAGAGAAGTCGCAGCC...TTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | CAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGCCACAGACTTTACTCCACTGTaGCCTTTCTGCTCAAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: QHTEVWVTPDQQHCCQATDFTPL*PFCSKN Trigger: GTTCTTTGAGCAGAAAGGGCACAGTGGAGTAAAGTC...TGTGGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CCA 90 bp | CAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTCTTGTGTCTCCTCTTaGTCATCTAGTAGTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: QAQAVQHTEVWVTPDQQHSCVSS*SSSSST Trigger: TGTAGAACTACTAGATGACCAAGAGGAGACACAAGA...ATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CCA 90 bp | GGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGTCTCCTCTTCTGGCTTaGGTTTATTTGGTAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: GPGSSTHRSVGDPRSAALSPLLA*VYLVTL Trigger: TAGAGTTACCAAATAAACCCAAGCCAGAAGAGGAGA...CAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | GCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCATCAATGGGTCTTCTTaGTTCTTCTTCAAAATCCTC | + |
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Preference number: 4 (lower is better) Translates to: AQAVQHTEVWVTPDQQHCINGSS*FFFKIL Trigger: GAGGATTTTGAAGAAGAATCAAGAAGACCCATTGAT...GCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGCCACACCCCATTTAGACCTTTCACTTaGTTTTCTCAGCTTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: HRSVGDPRSAALLSSHTPFRPFT*FSQLVL Trigger: AAGCACAAGCTGAGAAAATCAAGTGAAAGGTCTAAA...TGGGGTGTGGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGCCACACCCCAACGTGGATGAGTTTTTaGCCATTGATGAAGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HRSVGDPRSAALLSSHTPTWMSF*PLMKFS Trigger: TGAAAACTTCATCAATGGTCAAAAACTCATCCACGT...TGGGGTGTGGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | CAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTTCAACAAATTTTaGCAAGGTCAAGGAATCAGA | + |
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Preference number: 4 (lower is better) Translates to: QAQAVQHTEVWVTPDQQHCFNKF*QGQGIR Trigger: TCTGATTCCTTGACCTTGGCAAAATTTGTTGAAGCA...ATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CCA 90 bp | CAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGCCACACTTCTCTTGAATGTCTaGATCAGTTATCTGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QHTEVWVTPDQQHCCQATLLLNV*ISYLLW Trigger: CCACAGCAGATAACTGATCCAGACATTCAAGAGAAG...TGTGGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR GCA 90 bp | CAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTATATCTGGTGTCTTCTaGTCTGGATCTATTTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QAVQHTEVWVTPDQQHCCISGVF*SGSIFV Trigger: AACAAAAATAGATCCAGAGCAGAAGACACCAGATAT...ACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS CCA 90 bp | GCCCTTGTTGTCTCTGTAGGGAAGGCTGATGCTGCGGCTGAACAGTaGCTCCTCGATCCCCAGCAGCACTCGGGTGTGGTACGATATTGC | + |
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Preference number: 5 (lower is better) Translates to: ALVVSVGKADAAAEQ*LLDPQQHSGVVRYC Trigger: GCAATATCGTACCACACCCGAGTGCTGCTGGGGATCGAGGAGCCACTGTTCAGCCGCAGCATCAGCCTTCCCTACAGAGACAACAAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | GTAGGCCAGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACTGTAGCCCCGGGTCCTaGTCCTTACTTGGCTCTATT | + |
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Preference number: 5 (lower is better) Translates to: VGQGSSGPGSSTHRSVGDCSPGS*SLLGSI Trigger: AATAGAGCCAAGTAAGGACAAGGACCCGGGGCTACA...GTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCTGGCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | GGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGGCTCTGGATCTATTTTaGTTGGTAGCTGTGTACCTG | + |
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Preference number: 5 (lower is better) Translates to: GPGSSTHRSVGDPRSAALALDLF*LVAVYL Trigger: CAGGTACACAGCTACCAACAAAAATAGATCCAGAGC...CAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGCCACACCCCATGGCTGCGACTTCTCTaGAATGTCTGGATCAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: HRSVGDPRSAALLSSHTPWLRLL*NVWISY Trigger: ATAACTGATCCAGACATTCAAGAGAAGTCGCAGCCA...TGGGGTGTGGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | GCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAATCTGGTTTGTCTTCCTaGGGGAGGTCTCTCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AVQHTEVWVTPDQQHCCQSGLSS*GRSLSS Trigger: AGAGGAGAGAGACCTCCCCAAGGAAGACAAACCAGA...TTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | GTAGGCCAGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCTGCTTCAACAAATTTaGCCAAGGTCAAGGAATCAG | + |
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Preference number: 5 (lower is better) Translates to: VGQGSSGPGSSTHRSVGDLLQQI*PRSRNQ Trigger: CTGATTCCTTGACCTTGGCAAAATTTGTTGAAGCAG...GTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCTGGCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCTGGATCTATTTTTGTaGGTAGCTGTGTACCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: RGHQAQAVQHTEVWVTPDLDLFL*VAVYLF Trigger: GAACAGGTACACAGCTACCAACAAAAATAGATCCAG...ATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | TTATCTGATGTAGGCCAGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTTCCGATTTGGTCATCTaGGATGGAGGTAGAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LSDVGQGSSGPGSSTHRSSDLVI*DGGRAS Trigger: GGAAGCTCTACCTCCATCCAAGATGACCAAATCGGA...ACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCTGGCCTACATCAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | GCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCCACCCGTTTTCTCCGTaGTCTTTATTAGTTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: AQAVQHTEVWVTPDQQHCHPFSP*SLLVSP Trigger: AGGAGAAACTAATAAAGACAACGGAGAAAACGGGTG...GCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | CAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGCCACACTCTCCTCTTCTGGCTaGGGTTTATTTGGTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: QHTEVWVTPDQQHCCQATLSSSG*GLFGNS Trigger: AGAGTTACCAAATAAACCCAAGCCAGAAGAGGAGAG...TGTGGCTTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | GCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAACTTAATGGACTCTTCTaGTGTCTCCTCTTGGTCATC | + |
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Preference number: 5 (lower is better) Translates to: AVQHTEVWVTPDQQHCCQLNGLF*CLLLVI Trigger: GATGACCAAGAGGAGACACAAGAAGAGTCCATTAAG...TTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTCATCAGGCCCAGGCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCTGGCTTGGGTTTATTaGGTAACTCTAGATTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: RGHQAQAVQHTEVWVTPDLAWVY*VTLDFS Trigger: AGAAAAATCTAGAGTTACCAAATAAACCCAAGCCAG...ATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGCCTGGGCCTGATGACCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS GCA 90 bp | AGATCACTAATCCACTCTGCAACCCTTTCTGGGCTCCAGGTAAGATaGTCAAACTCTGGGGTAAGACTTGGCTTGGTTTCTTTACGTCCT | + |
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Preference number: 5 (lower is better) Translates to: RSLIHSATLSGLQVR*SNSGVRLGLVSLRP Trigger: AGGACGTAAAGAAACCAAGCCAAGTCTTACCCCAGAGTTTGAGCATCTTACCTGGAGCCCAGAAAGGGTTGCAGAGTGGATTAGTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | GCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAAGACTGTCTTAGTTTTTaGTCTGGGAACTTAGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: AVQHTEVWVTPDQQHCCQDCLSF*SGNLVC Trigger: GCAGACTAAGTTCCCAGACAAAAAACTAAGACAGTC...TTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS TCA 90 bp | GGTAACTCTAGATTTTTCTCGGTTGGTTCTGGCTGCGACTTCTCTTaGATGTCTGGATCAGTTATCTGCTGTGGCTTGTCACCCGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: GNSRFFSVGSGCDFS*MSGSVICCGLSPVF Trigger: GAAAACGGGTGACAAGCCACAGCAGATAACTGATCCAGACATTCAAGAGAAGTCGCAGCCAGAACCAACCGAGAAAAATCTAGAGTTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS-3UTR CAA 90 bp | GCAGTTCAACACACAGAAGTGTGGGTGACCCCAGATCAGCAGCATTGCTGTCAATACGTGGATGAGTTTTaGACCATTGATGAAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: AVQHTEVWVTPDQQHCCQYVDEF*TIDEVF Trigger: GAAAACTTCATCAATGGTCAAAAACTCATCCACGTA...TTGACAGCAATGCTGCTGATCTGGGGTCACCCACACTTCTGTGTGTTGAACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS CCA 90 bp | CCTTTAATGGTCTCTTTTGTGAGAGTTCTAGACTTGCTTCATCAATaGGTCTTCTTGATTCTTCTTCAAAATCCTCCAGTGGCCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PLMVSFVRVLDLLHQ*VFLILLQNPPVALR Trigger: TCTCAGGGCCACTGGAGGATTTTGAAGAAGAATCAAGAAGACCCATTGATGAAGCAAGTCTAGAACTCTCACAAAAGAGACCATTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CCA 90 bp | GGTTCTGGAACTTTCTCCTTAATGGACTCTTCTTGTGTCTCCTCTTaGTCATCTAGTAGTTCTACAGTAATCTGTTCTAGCATCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GSGTFSLMDSSCVSS*SSSSSTVICSSISG Trigger: TCCAGAGATGCTAGAACAGATTACTGTAGAACTACTAGATGACCAAGAGGAGACACAAGAAGAGTCCATTAAGGAGAAAGTTCCAGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CCA 72 bp | GTCTCTGTAGGGAAGGCTGATGCTGCGGCTGAACAGTaGCTCCTCGATCCCCAGCAGCACTCGGGTGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: VSVGKADAAAEQ*LLDPQQHSGVV Trigger: TACCACACCCGAGTGCTGCTGGGGATCGAGGAGCCACTGTTCAGCCGCAGCATCAGCCTTCCCTACAGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS CAA 72 bp | TACCTACGGGCACCAAATCCCCCTTGCGTGTCCTGGTaGGCTCTAGTGGCACATTTCCTACATTTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: YLRAPNPPCVSW*ALVAHFLHFLG Trigger: ACCCAGGAAATGTAGGAAATGTGCCACTAGAGCCAACCAGGACACGCAAGGGGGATTTGGTGCCCGTAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS TCA 72 bp | GTCTGGGAACTTAGTCTGCTCAGGTTGCTCTGTGCCTaGCTGCTCTGTGGACTTGAAGTGAGGTTTGAGATC | + |
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Preference number: 6 (lower is better) Translates to: VWELSLLRLLCA*LLCGLEVRFEI Trigger: GATCTCAAACCTCACTTCAAGTCCACAGAGCAGTCAGGCACAGAGCAACCTGAGCAGACTAAGTTCCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CCA 72 bp | TTTTACCTACGGGCACCAAATCCCCCTTGCGTGTCCTaGTTGGCTCTAGTGGCACATTTCCTACATTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FYLRAPNPPCVS*LALVAHFLHFL Trigger: CAGGAAATGTAGGAAATGTGCCACTAGAGCCAACCAGGACACGCAAGGGGGATTTGGTGCCCGTAGGTAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS GCA 72 bp | ATCCACTCTGCAACCCTTTCTGGGCTCCAGGTAAGATaGTCAAACTCTGGGGTAAGACTTGGCTTGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: IHSATLSGLQVR*SNSGVRLGLVS Trigger: AGAAACCAAGCCAAGTCTTACCCCAGAGTTTGAGCATCTTACCTGGAGCCCAGAAAGGGTTGCAGAGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS CCA 72 bp | CTCGGTTGGTTCTGGCTGCGACTTCTCTTGAATGTCTaGATCAGTTATCTGCTGTGGCTTGTCACCCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LGWFWLRLLLNV*ISYLLWLVTRF Trigger: AAAACGGGTGACAAGCCACAGCAGATAACTGATCCAGACATTCAAGAGAAGTCGCAGCCAGAACCAACCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CCA 72 bp | AACAGTGGCTCCTCGATCCCCAGCAGCACTCGGGTGTaGTACGATATTGCCTTCATGTCTTCAAAATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: NSGSSIPSSTRV*YDIAFMSSKSV Trigger: AACTGATTTTGAAGACATGAAGGCAATATCGTACCACACCCGAGTGCTGCTGGGGATCGAGGAGCCACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS CAA 90 bp | TGTCTTCCTTGGGGAGGTCTCTCTCCTCTTCTGGCTTGGGTTTATTaGGTAACTCTAGATTTTTCTCGGTTGGTTCTGGCTGCGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: CLPWGGLSPLLAWVY*VTLDFSRLVLAATS Trigger: AGAAGTCGCAGCCAGAACCAACCGAGAAAAATCTAGAGTTACCAAATAAACCCAAGCCAGAAGAGGAGAGAGACCTCCCCAAGGAAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CAA 90 bp | TCCAGTGGCCCTGAGACTTTCTTTTTAGTTGACTGTCTTAGTTTTTaGTCTGGGAACTTAGTCTGCTCAGGTTGCTCTGTGCCTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: SSGPETFFLVDCLSF*SGNLVCSGCSVPDC Trigger: GCAGTCAGGCACAGAGCAACCTGAGCAGACTAAGTTCCCAGACAAAAAACTAAGACAGTCAACTAAAAAGAAAGTCTCAGGGCCACTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CAA 72 bp | TGGGGAGGTCTCTCTCCTCTTCTGGCTTGGGTTTATTaGGTAACTCTAGATTTTTCTCGGTTGGTTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: WGGLSPLLAWVY*VTLDFSRLVLA Trigger: AGCCAGAACCAACCGAGAAAAATCTAGAGTTACCAAATAAACCCAAGCCAGAAGAGGAGAGAGACCTCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CAA 72 bp | GTGAGAGTTCTAGACTTGCTTCATCAATGGGTCTTCTaGATTCTTCTTCAAAATCCTCCAGTGGCCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VRVLDLLHQWVF*ILLQNPPVALR Trigger: TCTCAGGGCCACTGGAGGATTTTGAAGAAGAATCAAGAAGACCCATTGATGAAGCAAGTCTAGAACTCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CAA 72 bp | TTTGGAAATTCAGTCTGTGTTTGTAGCCCCGGGTCCTaGTCCTTACTTGGCTCTATTAATGTGTCCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: FGNSVCVCSPGS*SLLGSINVSFN Trigger: ATTAAAGGACACATTAATAGAGCCAAGTAAGGACAAGGACCCGGGGCTACAAACACAGACTGAATTTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CAA 72 bp | CAGTTATCTGCTGTGGCTTGTCACCCGTTTTCTCCGTaGTCTTTATTAGTTTCTCCTTTGGAAATTCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: QLSAVACHPFSP*SLLVSPLEIQS Trigger: AGACTGAATTTCCAAAGGAGAAACTAATAAAGACAACGGAGAAAACGGGTGACAAGCCACAGCAGATAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CAA 90 bp | TTATCTCTGGATTATACTCCTGTAATCCTGCTGCTTCAACAAATTTaGCCAAGGTCAAGGAATCAGACTTTACTCCACTGTGCCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSLDYTPVILLLQQI*PRSRNQTLLHCALS Trigger: AGAAAGGGCACAGTGGAGTAAAGTCTGATTCCTTGACCTTGGCAAAATTTGTTGAAGCAGCAGGATTACAGGAGTATAATCCAGAGATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182869.2 |
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| CDS CCA 72 bp | ACTTTCTCCTTAATGGACTCTTCTTGTGTCTCCTCTTaGTCATCTAGTAGTTCTACAGTAATCTGTTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: TFSLMDSSCVSS*SSSSSTVICSS Trigger: GCTAGAACAGATTACTGTAGAACTACTAGATGACCAAGAGGAGACACAAGAAGAGTCCATTAAGGAGAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CAA 90 bp | CTTTCTTTGAAGCCTTTAATGGTCTCTTTTGTGAGAGTTCTAGACTaGCTTCATCAATGGGTCTTCTTGATTCTTCTTCAAAATCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LSLKPLMVSFVRVLD*LHQWVFLILLQNPP Trigger: TGGAGGATTTTGAAGAAGAATCAAGAAGACCCATTGATGAAGCAAGTCTAGAACTCTCACAAAAGAGACCATTAAAGGCTTCAAAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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| CDS CAA 72 bp | AAGCCTTTAATGGTCTCTTTTGTGAGAGTTCTAGACTaGCTTCATCAATGGGTCTTCTTGATTCTTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: KPLMVSFVRVLD*LHQWVFLILLQ Trigger: TTGAAGAAGAATCAAGAAGACCCATTGATGAAGCAAGTCTAGAACTCTCACAAAAGAGACCATTAAAGGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169669.2 ENSMUST00000182869.2 |
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