Pregenerated sensors for SAMD14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047181Ensembl transcript IDs: ENSMUST00000055947.10, ENSMUST00000124735.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCACCCAAGAAGCTGGGTCAGCATTGCACCTGGACCCTCTATCTCTaGACACGCCCTACAAAGGACATGTGCCAGTCCCACGCGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: APKKLGQHCTWTLYL*TRPTKDMCQSHAGL Trigger: CAGCCCCGCGTGGGACTGGCACATGTCCTTTGTAGGGCGTGTTCAGAGATAGAGGGTCCAGGTGCAATGCTGACCCAGCTTCTTGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR GCA 90 bp | CCTGGCCTTCAGCCACTTTCCCAGGCAGGAGAGAGGGAGTTAACATaGAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGTGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: PGLQPLSQAGERELT*RSCSPLQETGRGGG Trigger: ACCCCCACCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAAAGTGGCTGAAGGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR TCA 90 bp | TTCCTTACAGAGGCCAGCTTATCCTGCCCTGCTCTCTCTCTCCTCTaGGGAGGTGTCTGGGAATCCACCCTGAGTGCTACTGGCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: FLTEASLSCPALSLL*GGVWESTLSATGTA Trigger: GGCAGTGCCAGTAGCACTCAGGGTGGATTCCCAGACACCTCCTCAGAGGAGAGAGAGAGCAGGGCAGGATAAGCTGGCCTCTGTAAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR CCA 90 bp | GTACTCTCCGAAGAAGTGGATTTTAGCTCTGCGAAAGGGACTCAATaGGAGAGGAGCAGACCTGTGTGCTGGAACCTGCAGGTGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VLSEEVDFSSAKGTQ*ERSRPVCWNLQVRE Trigger: CTCCCTCACCTGCAGGTTCCAGCACACAGGTCTGCTCCTCTCCCATTGAGTCCCTTTCGCAGAGCTAAAATCCACTTCTTCGGAGAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR GCA 90 bp | CACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGTTGCCCGTAGGTGGCTGCAAGTaGGCCGGGGTGCCAGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: HLQKVRRHSCLLSPVGLPVGGCK*AGVPAP Trigger: CGGGGCTGGCACCCCGGCGCACTTGCAGCCACCTAC...GGGCAACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR TCA 90 bp | CACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGACCCTGCCTCCCTGGTaGGGCCCATGTAGGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HSHLQKVRRHSCLLSPVGTLPPW*GPCRWL Trigger: CAGCCACCTACATGGGCCTCACCAGGGAGGCAGGGT...CCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR GCA 90 bp | CCACCACACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGCTCCGAGAGCCTGGTaGCTGGACCCTGCCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PPHSHLQKVRRHSCLLSPAPRAW*LDPASL Trigger: CAGGGAGGCAGGGTCCAGGCACCAGGCTCTCGGAGC...TGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTGTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCCTCTGTAGCCTAGCAAACCTAAGCCAGCAGTGTCTGTCCATCCGCCCCGCGAAAGGGACTCAATaGGAGAGGAGCAGACCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VPLCSLANLSQQCLSIRPAKGTQ*ERSRPV Trigger: CACAGGTCTGCTCCTCTCCCATTGAGTCCCTTTCGC...GGGGCGGATGGACAGACACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTTCTCCCACCACACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTCTGGTGCCTGGACCCTaGCTCCCTGGTGAGGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: ICSPTTQPPSKGEETQLSLVPGP*LPGEAH Trigger: ATGGGCCTCACCAGGGAGGCAGGGTCCAGGCACCAG...AGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTGTGGTGGGAGAACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGTCTGGGCTCCGCGTTTaGTGCATTCCTGGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: REGVNMQVLFTSPGNWEGSGLRV*CIPGLC Trigger: GCAGAGGCCAGGAATGCAGCAAACGCGGAGCCCAGA...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR CCA 90 bp | GCCACTTTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCACCCTGAGTGCTACTaGCACTGCCCACTGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ATFPGRREGVNMQVLFTSHPECY*HCPLAS Trigger: AGAGGCCAGTGGGCAGTGCCAGTAGCACTCAGGGTG...AGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAAAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGGCTCTCTCTCTCCTCTaGGGAGGTGTCTGGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: REGVNMQVLFTSPGNWEGALSLL*GGVWES Trigger: GGATTCCCAGACACCTCCTCAGAGGAGAGAGAGAGC...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR TCA 90 bp | GCCACTTTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTGAGAGAGAGAGTGAGTaGGAGCTCCCTTCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ATFPGRREGVNMQVLFTSERESE*ELPSPP Trigger: AGGGGGAGAAGGGAGCTCTCACTCACTCTCTCTCTC...AGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAAAGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGGGAAGAGAGAGAGAGTGAGTGAGAGCTCCCTTCTCCCCCTCTGCCTTTTCCCCCTGGAAGTCTaGGCCAAACAAGTCCTCGAA | + |
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Preference number: 2 (lower is better) Translates to: REGKRERVSESSLLPLCLFPLEV*AKQVLE Trigger: TTCGAGGACTTGTTTGGCGCAGACTTCCAGGGGGAA...AAGGCAGAGGGGGAGAAGGGAGCTCTCACTCACTCTCTCTCTCTTCCCCTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR GCA 90 bp | GCCACTTTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTAGGAGCAGACCTGTGTaGTGGAACCTGCAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATFPGRREGVNMQVLFTSRSRPV*WNLQVR Trigger: CCTCACCTGCAGGTTCCAGCACACAGGTCTGCTCCT...AGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAAAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR GCA 90 bp | GTCCCCCTCTGTAGCCTAGCAAACCTAAGCCAGCAGTGTCTGTCCATCCGCCCCTTCAATCTGGCAGCATaGAGGCCACACTTAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: VPLCSLANLSQQCLSIRPFNLAA*RPHLGC Trigger: ACACCCTAAGTGTGGCCTGCATGCTGCCAGATTGAA...GGGGCGGATGGACAGACACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGTGGGGGTTTGTCATCTAAAAACTGGCACTGCCCACTaGCCTCTCTGGGGAGATCTG | + |
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Preference number: 2 (lower is better) Translates to: GPVHLSRKLGGVGVCHLKTGTAH*PLWGDL Trigger: CAGATCTCCCCAGAGAGGCCAGTGGGCAGTGCCAGT...TTTTAGATGACAAACCCCCACCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCCTCTGTAGCCTAGCAAACCTAAGCCAGCAGTGTCTGTCCATCCGCCCCACAAGTCCTCGAAATTaGGTTTATTACTGGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VPLCSLANLSQQCLSIRPTSPRN*VYYWAL Trigger: GAGGGCCCAGTAATAAACCCAATTTCGAGGACTTGT...GGGGCGGATGGACAGACACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGTGGGGGTTTGTCATCTAAAACGTTTGCTGCATTCCTaGCCTCTGCCCTCTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: GPVHLSRKLGGVGVCHLKRLLHS*PLPSSS Trigger: AGATGAAGAGGGCAGAGGCCAGGAATGCAGCAAACG...TTTTAGATGACAAACCCCCACCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR GCA 72 bp | GGGGCCGCGTGCTCCGAGAGCCTGGTGCCTGGACCCTaGCTCCCTGGTGAGGCCCATGTAGGTGGCTGCAAG | + |
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Preference number: 3 (lower is better) Translates to: GAACSESLVPGP*LPGEAHVGGCK Trigger: CTTGCAGCCACCTACATGGGCCTCACCAGGGAGGCAGGGTCCAGGCACCAGGCTCTCGGAGCACGCGGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR GCA 72 bp | TCTCCTCTGAGGAGGTGTCTGGGAATCCACCCTGAGTaGTACTGGCACTGCCCACTGGCCTCTCTGGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SPLRRCLGIHPE*YWHCPLASLGR Trigger: TCTCCCCAGAGAGGCCAGTGGGCAGTGCCAGTAGCACTCAGGGTGGATTCCCAGACACCTCCTCAGAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR CAA 90 bp | CACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGTTGCCCCTCTGGGCTCCGCGTTaGCTGCATTCCTGGCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: HLQKVRRHSCLLSPVGLPLWAPR*LHSWPL Trigger: CAGAGGCCAGGAATGCAGCAAACGCGGAGCCCAGAG...GGGCAACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR CCA 72 bp | CTGAGGAGGTGTCTGGGAATCCACCCTGAGTGCTACTaGCACTGCCCACTGGCCTCTCTGGGGAGATCTGTT | + |
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Preference number: 3 (lower is better) Translates to: LRRCLGIHPECY*HCPLASLGRSV Trigger: AACAGATCTCCCCAGAGAGGCCAGTGGGCAGTGCCAGTAGCACTCAGGGTGGATTCCCAGACACCTCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR GCA 72 bp | CAGCCACTTTCCCAGGCAGGAGAGAGGGAGTTAACATaGAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: QPLSQAGERELT*RSCSPLQETGR Trigger: CCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAAAGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCTGGGCTCCGCGTTTGCTGCATTCCTGGCCTCTGCCCTCTTCATCTGCCAACAAGTCCTCGAAATaGGGTTTATTACTGGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: LLWAPRLLHSWPLPSSSANKSSK*GLLLGP Trigger: AGGGCCCAGTAATAAACCCAATTTCGAGGACTTGTT...GGCAGATGAAGAGGGCAGAGGCCAGGAATGCAGCAAACGCGGAGCCCAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR TCA 72 bp | GATCTGTTCTCCCACCACACAGCCACCTTCAAAAGGTaGGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGT | + |
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Preference number: 3 (lower is better) Translates to: DLFSHHTATFKR*GDTAVSCLQSG Trigger: ACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTGTGGTGGGAGAACAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR TCA 72 bp | AAGCTGGGTCAGCATTGCACCTGGACCCTCTATCTCTaGACACGCCCTACAAAGGACATGTGCCAGTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: KLGQHCTWTLYL*TRPTKDMCQSH Trigger: GTGGGACTGGCACATGTCCTTTGTAGGGCGTGTTCAGAGATAGAGGGTCCAGGTGCAATGCTGACCCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR CCA 72 bp | CTGGGCCTAGTAGTAACTGACCAGCACCCAAGAAGCTaGGTCAGCATTGCACCTGGACCCTCTATCTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LGLVVTDQHPRS*VSIAPGPSISE Trigger: TTCAGAGATAGAGGGTCCAGGTGCAATGCTGACCCAGCTTCTTGGGTGCTGGTCAGTTACTACTAGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | TGCCTCCCTGGTGAGGCCCATGTAGGTGGCTGCAAGTGCGCCGGGGTGCCAGCCCGTCCTCGGCAGAGCTaGCACTGTCTCGTAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: CLPGEAHVGGCKCAGVPARPRQS*HCLVAW Trigger: CCAGGCTACGAGACAGTGCCAGCTCTGCCGAGGACG...GGCTGGCACCCCGGCGCACTTGCAGCCACCTACATGGGCCTCACCAGGGAGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | CTCCTCTGGGCTCCGCGTTTGCTGCATTCCTGGCCTCTGCCCTCTTCATCTGCCGTGGCGAGCCGGAGGTaGCGGCCAGGCCCTCATGCG | + |
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Preference number: 4 (lower is better) Translates to: LLWAPRLLHSWPLPSSSAVASRR*RPGPHA Trigger: CGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCAC...GGCAGATGAAGAGGGCAGAGGCCAGGAATGCAGCAAACGCGGAGCCCAGAGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | GAGAGCCTGGTGCCTGGACCCTGCCTCCCTGGTGAGGCCCATGTAGGTGGCTGCTCTTGGGGCTGCTGCTaGGGGGTGTGGAGTCATCGC | + |
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Preference number: 4 (lower is better) Translates to: ESLVPGPCLPGEAHVGGCSWGCC*GVWSHR Trigger: GCGATGACTCCACACCCCCCAGCAGCAGCCCCAAGA...GCAGCCACCTACATGGGCCTCACCAGGGAGGCAGGGTCCAGGCACCAGGCTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | TTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGATGCGAGGCGGCGTTGTaGAGGGGCCGGTACCGAGCG | + |
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Preference number: 4 (lower is better) Translates to: FPGRREGVNMQVLFTSPGCEAAL*RGRYRA Trigger: CGCTCGGTACCGGCCCCTGCACAACGCCGCCTCGCA...TCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | TTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGACCGGTACCGAGCGAGTaGCGAGGGCGGCGGTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: FPGRREGVNMQVLFTSPGPVPSE*RGRRFV Trigger: GACGAACCGCCGCCCTCGCCACTCGCTCGGTACCGG...TCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | AGGGAGGGGAAGAGAGAGAGAGTGAGTGAGAGCTCCCTTCTCCCCCTCTGCCTTTTGCTTCCGTCCAGCTaGAGGAGCTGCGGCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: REGKRERVSESSLLPLCLLLPSS*RSCGPS Trigger: GGATGGGCCGCAGCTCCTGCAGCTGGACGGAAGCAA...AAGGCAGAGGGGGAGAAGGGAGCTCTCACTCACTCTCTCTCTCTTCCCCTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR TCA 90 bp | AGGGAGGGGAAGAGAGAGAGAGTGAGTGAGAGCTCCCTTCTCCCCCTCTGCCTTCCTTGCCGCTGTCCGTaGACCAGGAAAAGGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: REGKRERVSESSLLPLCLPCRCP*TRKRAG Trigger: TCCTGCCCTTTTCCTGGTTCACGGACAGCGGCAAGG...AAGGCAGAGGGGGAGAAGGGAGCTCTCACTCACTCTCTCTCTCTTCCCCTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGCGTCCTCATCCAGACTaGGCCTCAAGCCCGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: REGVNMQVLFTSPGNWEGRPHPD*ASSPGA Trigger: AGCCCCCGGGCTTGAGGCGCAGTCTGGATGAGGACG...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | ATCTGTTCTCCCACCACACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTGCGGCCAGGCCCTCATaGGAGGCGGCGTTGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ICSPTTQPPSKGEETQLSAARPS*EAALCR Trigger: CCTGCACAACGCCGCCTCGCATGAGGGCCTGGCCGC...AGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTGTGGTGGGAGAACAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | GTCCCCCTCTGTAGCCTAGCAAACCTAAGCCAGCAGTGTCTGTCCATCCGCCCCACCAGTGCTCGGTCATaGGAATTGCTGAGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VPLCSLANLSQQCLSIRPTSARS*ELLSPR Trigger: CCTGGGGCTCAGCAATTCGCATGACCGAGCACTGGT...GGGGCGGATGGACAGACACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | GTCCCCCTCTGTAGCCTAGCAAACCTAAGCCAGCAGTGTCTGTCCATCCGCCCCCTTCTCAGCAGCCGCTaGCAGCTCCTTCAACTTCCG | + |
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Preference number: 4 (lower is better) Translates to: VPLCSLANLSQQCLSIRPLLSSR*QLLQLP Trigger: CGGAAGTTGAAGGAGCTGGCAGCGGCTGCTGAGAAG...GGGGCGGATGGACAGACACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | TGCCACCTGCTTCCCCCTGGAAGTCTGCGCCAAACAAGTCCTCGAAATTGGGTTTGTCCAAGCCGATGGTaGGGCTGGCAGGCTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: CHLLPPGSLRQTSPRNWVCPSRW*GWQAQG Trigger: CCCCTGAGCCTGCCAGCCCCACCATCGGCTTGGACA...AACCCAATTTCGAGGACTTGTTTGGCGCAGACTTCCAGGGGGAAGCAGGTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | CACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGTTGCCCTCTCCTTCCTGCTCCTaGTGGTGGATGCTCGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: HLQKVRRHSCLLSPVGLPSPSCS*WWMLGG Trigger: TCCGCCGAGCATCCACCAGCAGGAGCAGGAAGGAGA...GGGCAACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | GTCCCCCTCTGTAGCCTAGCAAACCTAAGCCAGCAGTGTCTGTCCATCCGCCCCAGCTGCTGTCCAGTCTaGTGGTCTCTGGTACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VPLCSLANLSQQCLSIRPSCCPV*WSLVQP Trigger: TGGCTGTACCAGAGACCACCAGACTGGACAGCAGCT...GGGGCGGATGGACAGACACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGAACGACGCACGAAGCTaGGGGAGCTGTCGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: REGVNMQVLFTSPGNWEGNDARS*GSCRRR Trigger: CCTCCTCCGACAGCTCCCCCAGCTTCGTGCGTCGTT...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGCCTTCCTGCTCCTGCTaGTGGATGCTCGGCGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: REGVNMQVLFTSPGNWEGPSCSC*WMLGGE Trigger: CTCTCCGCCGAGCATCCACCAGCAGGAGCAGGAAGG...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | CACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGTTGCCCACTCCCTGCTGCCCATaGACAGGCGGTTGCTACCCT | + |
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Preference number: 4 (lower is better) Translates to: HLQKVRRHSCLLSPVGLPTPCCP*TGGCYP Trigger: AGGGTAGCAACCGCCTGTCCATGGGCAGCAGGGAGT...GGGCAACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | CTCCTCTGGGCTCCGCGTTTGCTGCATTCCTGGCCTCTGCCCTCTTCATCTGCCCTCAGGGTAGATTCCTaGGAAGCTGACTTCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LLWAPRLLHSWPLPSSSALRVDS*EADFLG Trigger: CCCCAAGAAGTCAGCTTCCCAGGAATCTACCCTGAG...GGCAGATGAAGAGGGCAGAGGCCAGGAATGCAGCAAACGCGGAGCCCAGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | GCCACTTTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTGGCCCACCTGCTGGCTaGTCCAGTGTTGTACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ATFPGRREGVNMQVLFTSGPPAG*SSVVRQ Trigger: CTGCCGTACAACACTGGACCAGCCAGCAGGTGGGCC...AGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAAAGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | TGCCACCTGCTTCCCCCTGGAAGTCTGCGCCAAACAAGTCCTCGAAATTGGGTTAGGCTGTGTAGCCACTaGCCCACCTGCTGGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: CHLLPPGSLRQTSPRNWVRLCSH*PTCWLV Trigger: GACCAGCCAGCAGGTGGGCCAGTGGCTACACAGCCT...AACCCAATTTCGAGGACTTGTTTGGCGCAGACTTCCAGGGGGAAGCAGGTGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR TCA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGCTGACTTCTTGGGGCTaGAGCCCTCGTGTTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: REGVNMQVLFTSPGNWEGLTSWG*SPRVWG Trigger: CCCCCAAACACGAGGGCTTCAGCCCCAAGAAGTCAG...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | TGCCACCTGCTTCCCCCTGGAAGTCTGCGCCAAACAAGTCCTCGAAATTGGGTTCTACAGACTCCCTGCTaGCCATGGACAGGCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: CHLLPPGSLRQTSPRNWVLQTPC*PWTGGC Trigger: GCAACCGCCTGTCCATGGGCAGCAGGGAGTCTGTAG...AACCCAATTTCGAGGACTTGTTTGGCGCAGACTTCCAGGGGGAAGCAGGTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | GTCCCCCTCTGTAGCCTAGCAAACCTAAGCCAGCAGTGTCTGTCCATCCGCCCCAACTCGGCAGCATACTaGTCCAGGTTGAGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: VPLCSLANLSQQCLSIRPNSAAY*SRLRLC Trigger: ACACAGCCTCAACCTGGAGCAGTATGCTGCCGAGTT...GGGGCGGATGGACAGACACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | CACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGTTGCCCCTTCTCCCGCTGCTTTaGGGTCTTCTCCTGCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HLQKVRRHSCLLSPVGLPLLPLL*GLLLRL Trigger: AAGGCGCAGGAGAAGACCGCAAAGCAGCGGGAGAAG...GGGCAACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | TTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGATCTTGTCCAAGCCGATaGTGGGGCTGGCAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FPGRREGVNMQVLFTSPGSCPSR*WGWQAQ Trigger: CTGAGCCTGCCAGCCCCACCATCGGCTTGGACAAGA...TCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGCACTGGCCCACCTGCTaGCTGGTCCAGTGTTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: REGVNMQVLFTSPGNWEGHWPTC*LVQCCT Trigger: CGTACAACACTGGACCAGCCAGCAGGTGGGCCAGTG...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR TCA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGCATACTGCTCCAGGTTaGGGCTGTGTAGCCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: REGVNMQVLFTSPGNWEGHTAPG*GCVATG Trigger: GCCAGTGGCTACACAGCCTCAACCTGGAGCAGTATG...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | TTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGACCATGGACAGGCGGTTaGTACCCTTCTCCTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FPGRREGVNMQVLFTSPGPWTGG*YPSPSC Trigger: GCAGGAAGGAGAAGGGTAGCAACCGCCTGTCCATGG...TCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | CCTGCTTCCCCCTGGAAGTCTGCGCCAAACAAGTCCTCGAAATTGGGTTTATTATGCGGCCCATCCACCTaGCGGGCAGCAAACTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PASPWKSAPNKSSKLGLLCGPST*RAANSA Trigger: TGCCGAGTTTGCTGCCCGGCAGGTGGATGGGCCGCA...TAATAAACCCAATTTCGAGGACTTGTTTGGCGCAGACTTCCAGGGGGAAGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | CACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGCAGTCTGGTGGTCTCTaGTACAGCCAAGTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: HSHLQKVRRHSCLLSPVGQSGGL*YSQVQV Trigger: GACCTGGACTTGGCTGTACCAGAGACCACCAGACTG...CCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | CCTGCTTCCCCCTGGAAGTCTGCGCCAAACAAGTCCTCGAAATTGGGTTTATTAGGTGTCTCCGGCCCTTaGCCAGCAGTTGAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PASPWKSAPNKSSKLGLLGVSGP*PAVEPW Trigger: CCAGGGCTCAACTGCTGGCCAAGGGCCGGAGACACC...TAATAAACCCAATTTCGAGGACTTGTTTGGCGCAGACTTCCAGGGGGAAGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | CCACCACACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGAAAGATCCACTGGCTaGGGAGCCTGGACCCGAATG | + |
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Preference number: 4 (lower is better) Translates to: PPHSHLQKVRRHSCLLSPERSTG*GAWTRM Trigger: CATTCGGGTCCAGGCTCCCCAGCCAGTGGATCTTTC...TGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTGTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| 3UTR CAA 72 bp | GTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGTaGCCCAGGCTACTCTCTAAACCTAGGAATCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VRRHSCLLSPVG*PRLLSKPRNPG Trigger: GCCAGGATTCCTAGGTTTAGAGAGTAGCCTGGGCAACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | TTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGACCAGGCTCTTCAGTTTaGTTCCGTCCAGCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FPGRREGVNMQVLFTSPGPGSSV*FRPAAG Trigger: TCCTGCAGCTGGACGGAAGCAAACTGAAGAGCCTGG...TCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR GCA 90 bp | CACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGCTTCCGCTTCACCAGTaGTCGGTCATGCGAATTGCT | + |
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Preference number: 4 (lower is better) Translates to: HSHLQKVRRHSCLLSPVGLPLHQ*SVMRIA Trigger: AGCAATTCGCATGACCGAGCACTGGTGAAGCGGAAG...CCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CCA 90 bp | CACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGTTGCCCTGCTGTCCAGTCTGGTaGTCTCTGGTACAGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLQKVRRHSCLLSPVGLPCCPVW*SLVQPS Trigger: ACTTGGCTGTACCAGAGACCACCAGACTGGACAGCA...GGGCAACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR TCA 90 bp | ATCTGTTCTCCCACCACACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTGGTCATGCGAATTGCTaGGCCCCAGGCTCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ICSPTTQPPSKGEETQLSGHANC*APGSSV Trigger: AACTGAAGAGCCTGGGGCTCAGCAATTCGCATGACC...AGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTGTGGTGGGAGAACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | GGCGAGCCGGAGGTGGCGGCCAGGCCCTCATGCGAGGCGGCGTTGTaGAGGGGCCGGTACCGAGCGAGTGGCGAGGGCGGCGGTTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: GEPEVAARPSCEAAL*RGRYRASGEGGGSS Trigger: GGACGAACCGCCGCCCTCGCCACTCGCTCGGTACCGGCCCCTGCACAACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | GGTGCAGAGCGTGGTGGCGAGCCGGAGGTGGCGGCCAGGCCCTCATaGGAGGCGGCGTTGTGCAGGGGCCGGTACCGAGCGAGTGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAERGGEPEVAARPS*EAALCRGRYRASGE Trigger: CTCGCCACTCGCTCGGTACCGGCCCCTGCACAACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | GGGAGCTGTCGGAGGAGGGTGCAGAGCGTGGTGGCGAGCCGGAGGTaGCGGCCAGGCCCTCATGCGAGGCGGCGTTGTGCAGGGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSCRRRVQSVVASRR*RPGPHARRRCAGAG Trigger: ACCGGCCCCTGCACAACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACCCTCCTCCGACAGCTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | ACGACGCACGAAGCTGGGGGAGCTGTCGGAGGAGGGTGCAGAGCGTaGTGGCGAGCCGGAGGTGGCGGCCAGGCCCTCATGCGAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: TTHEAGGAVGGGCRA*WRAGGGGQALMRGG Trigger: GCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACCCTCCTCCGACAGCTCCCCCAGCTTCGTGCGTCGT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | ACGCACGAAGCTGGGGGAGCTGTCGGAGGAGGGTGCAGAGCGTGGTaGCGAGCCGGAGGTGGCGGCCAGGCCCTCATGCGAGGCGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: THEAGGAVGGGCRAW*RAGGGGQALMRGGV Trigger: AACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACCCTCCTCCGACAGCTCCCCCAGCTTCGTGCGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | GCCCTCATGCGAGGCGGCGTTGTGCAGGGGCCGGTACCGAGCGAGTaGCGAGGGCGGCGGTTCGTCCTCATCCAGACTGCGCCTCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: ALMRGGVVQGPVPSE*RGRRFVLIQTAPQA Trigger: GGCTTGAGGCGCAGTCTGGATGAGGACGAACCGCCGCCCTCGCCACTCGCTCGGTACCGGCCCCTGCACAACGCCGCCTCGCATGAGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | TCGAGGGTAACGACGCACGAAGCTGGGGGAGCTGTCGGAGGAGGGTaGAGAGCGTGGTGGCGAGCCGGAGGTGGCGGCCAGGCCCTCATG | + |
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Preference number: 5 (lower is better) Translates to: SRVTTHEAGGAVGGG*RAWWRAGGGGQALM Trigger: CATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACCCTCCTCCGACAGCTCCCCCAGCTTCGTGCGTCGTTACCCTCGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CAA 90 bp | GAGAGCCTGGTGCCTGGACCCTGCCTCCCTGGTGAGGCCCATGTAGGTGGCTGCTCATGCGAGGCGGCGTaGTGCAGGGGCCGGTACCGA | + |
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Preference number: 5 (lower is better) Translates to: ESLVPGPCLPGEAHVGGCSCEAA*CRGRYR Trigger: TCGGTACCGGCCCCTGCACAACGCCGCCTCGCATGA...GCAGCCACCTACATGGGCCTCACCAGGGAGGCAGGGTCCAGGCACCAGGCTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | CCTTGCCTCCGGGCCCATCAGAGCCTTCACCGTCCTCGGCAGAGCTaGCACTGTCTCGTAGCCTGGAACGGGAAGGCCGGTGTCTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: PCLRAHQSLHRPRQS*HCLVAWNGKAGVSG Trigger: GCCGGAGACACCGGCCTTCCCGTTCCAGGCTACGAGACAGTGCCAGCTCTGCCGAGGACGGTGAAGGCTCTGATGGGCCCGGAGGCAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS CCA 90 bp | CATCTTCGCTGTGCGGCTCTGCTCGAGGGTAACGACGCACGAAGCTaGGGGAGCTGTCGGAGGAGGGTGCAGAGCGTGGTGGCGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: HLRCAALLEGNDARS*GSCRRRVQSVVASR Trigger: CCGGCTCGCCACCACGCTCTGCACCCTCCTCCGACAGCTCCCCCAGCTTCGTGCGTCGTTACCCTCGAGCAGAGCCGCACAGCGAAGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCTGGTGAGGCCCATGTAGGTGGCTGCAAGTGCGCCGGGGTGCCAGCCTGGGAAGCTGACTTCTaGGGGCTGAAGCCCTCGTGT | + |
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Preference number: 5 (lower is better) Translates to: CLPGEAHVGGCKCAGVPAWEADF*GLKPSC Trigger: ACACGAGGGCTTCAGCCCCAAGAAGTCAGCTTCCCA...GGCTGGCACCCCGGCGCACTTGCAGCCACCTACATGGGCCTCACCAGGGAGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | CTGAGCCCCAGGCTCTTCAGTTTGCTTCCGTCCAGCTGCAGGAGCTaGGGCCCATCCACCTGCCGGGCAGCAAACTCGGCAGCATACTGC | + |
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Preference number: 5 (lower is better) Translates to: LSPRLFSLLPSSCRS*GPSTCRAANSAAYC Trigger: GCAGTATGCTGCCGAGTTTGCTGCCCGGCAGGTGGATGGGCCGCAGCTCCTGCAGCTGGACGGAAGCAAACTGAAGAGCCTGGGGCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | TTCTCGCGGCGCCGCAGCTTCTCCCGCTGCTTTGCGGTCTTCTCCTaGGCCTTCCGTTCCTTCTCAGCAGCCGCTGCCAGCTCCTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: FSRRRSFSRCFAVFS*AFRSFSAAAASSFN Trigger: GTTGAAGGAGCTGGCAGCGGCTGCTGAGAAGGAACGGAAGGCGCAGGAGAAGACCGCAAAGCAGCGGGAGAAGCTGCGGCGCCGCGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | TGCGAATTGCTGAGCCCCAGGCTCTTCAGTTTGCTTCCGTCCAGCTaGAGGAGCTGCGGCCCATCCACCTGCCGGGCAGCAAACTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: CELLSPRLFSLLPSS*RSCGPSTCRAANSA Trigger: TGCCGAGTTTGCTGCCCGGCAGGTGGATGGGCCGCAGCTCCTGCAGCTGGACGGAAGCAAACTGAAGAGCCTGGGGCTCAGCAATTCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS TCA 90 bp | AGCCTGGAACGGGAAGGCCGGTGTCTCCGGCCCTTGGCCAGCAGTTaGGCCCTGGCTTTGTGTAAGCTGCTGTCCAGTCTGGTGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLEREGRCLRPLASS*ALALCKLLSSLVVS Trigger: AGAGACCACCAGACTGGACAGCAGCTTACACAAAGCCAGGGCTCAACTGCTGGCCAAGGGCCGGAGACACCGGCCTTCCCGTTCCAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS GCA 90 bp | GGACAGGCGGTTGCTACCCTTCTCCTTCCTGCTCCTGCTGGTGGATaGTCGGCGGAGAGTGACCCCCAGGTCCAGGAATTTCCTGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: GQAVATLLLPAPAGG*SAESDPQVQEFPAS Trigger: ACTCGCAGGAAATTCCTGGACCTGGGGGTCACTCTCCGCCGAGCATCCACCAGCAGGAGCAGGAAGGAGAAGGGTAGCAACCGCCTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | CACTGTCTCGTAGCCTGGAACGGGAAGGCCGGTGTCTCCGGCCCTTaGCCAGCAGTTGAGCCCTGGCTTTGTGTAAGCTGCTGTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: HCLVAWNGKAGVSGP*PAVEPWLCVSCCPV Trigger: GACTGGACAGCAGCTTACACAAAGCCAGGGCTCAACTGCTGGCCAAGGGCCGGAGACACCGGCCTTCCCGTTCCAGGCTACGAGACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCTGGGCTCCGCGTTTGCTGCATTCCTGGCCTCTGCCCTCTTCATCTGCCGCTCGGTCATGCGAATaGCTGAGCCCCAGGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLWAPRLLHSWPLPSSSAARSCE*LSPRLF Trigger: GAAGAGCCTGGGGCTCAGCAATTCGCATGACCGAGC...GGCAGATGAAGAGGGCAGAGGCCAGGAATGCAGCAAACGCGGAGCCCAGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | AACGGGAAGGCCGGTGTCTCCGGCCCTTGGCCAGCAGTTGAGCCCTaGCTTTGTGTAAGCTGCTGTCCAGTCTGGTGGTCTCTGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: NGKAGVSGPWPAVEP*LCVSCCPVWWSLVQ Trigger: CTGTACCAGAGACCACCAGACTGGACAGCAGCTTACACAAAGCCAGGGCTCAACTGCTGGCCAAGGGCCGGAGACACCGGCCTTCCCGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS-3UTR CAA 90 bp | CCACCACACAGCCACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCACAGCCGTCGGTCACCTaGCCTCCGGGCCCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPHSHLQKVRRHSCLLSPQPSVT*PPGPSE Trigger: CTCTGATGGGCCCGGAGGCAAGGTGACCGACGGCTG...TGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTGGCTGTGTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | ACGGGGAGCTTCCTGTCCTTCCAGAACCTTCTACAGACTCCCTGCTaGCCATGGACAGGCGGTTGCTACCCTTCTCCTTCCTGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGSFLSFQNLLQTPC*PWTGGCYPSPSCSC Trigger: GCAGGAGCAGGAAGGAGAAGGGTAGCAACCGCCTGTCCATGGGCAGCAGGGAGTCTGTAGAAGGTTCTGGAAGGACAGGAAGCTCCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | GCCGCTGCCAGCTCCTTCAACTTCCGCTTCACCAGTGCTCGGTCATaGGAATTGCTGAGCCCCAGGCTCTTCAGTTTGCTTCCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAASSFNFRFTSARS*ELLSPRLFSLLPSS Trigger: GCTGGACGGAAGCAAACTGAAGAGCCTGGGGCTCAGCAATTCGCATGACCGAGCACTGGTGAAGCGGAAGTTGAAGGAGCTGGCAGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | CTTTGCGGTCTTCTCCTGCGCCTTCCGTTCCTTCTCAGCAGCCGCTaGCAGCTCCTTCAACTTCCGCTTCACCAGTGCTCGGTCATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LCGLLLRLPFLLSSR*QLLQLPLHQCSVMR Trigger: TCGCATGACCGAGCACTGGTGAAGCGGAAGTTGAAGGAGCTGGCAGCGGCTGCTGAGAAGGAACGGAAGGCGCAGGAGAAGACCGCAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | ACTCATCCGAAGACTGGGACAGCGTGTGGTAGGGATAGGAACACTTaGTCTCCTGTCGAGGACCACCGGGGATCTTGGGGCTGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: THPKTGTACGRDRNT*SPVEDHRGSWGCCW Trigger: CCAGCAGCAGCCCCAAGATCCCCGGTGGTCCTCGACAGGAGACCAAGTGTTCCTATCCCTACCACACGCTGTCCCAGTCTTCGGATGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CAA 90 bp | GTCCCCCTCTGTAGCCTAGCAAACCTAAGCCAGCAGTGTCTGTCCATCCGCCCCTTCCTGCGAGTCTTCTaGTCCAAGCCGATGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPLCSLANLSQQCLSIRPFLRVF*SKPMVG Trigger: CCCCACCATCGGCTTGGACAAGAAGACTCGCAGGAA...GGGGCGGATGGACAGACACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CAA 90 bp | CACCTTCAAAAGGTGAGGAGACACAGCTGTCTCCTGTCTCCAGTCGGGTTGCCCCTGAAGCCCTCGTGTTaGGGGGAACAGGTCGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLQKVRRHSCLLSPVGLPLKPSC*GEQVGE Trigger: CTCCCCGACCTGTTCCCCCAAACACGAGGGCTTCAG...GGGCAACCCGACTGGAGACAGGAGACAGCTGTGTCTCCTCACCTTTTGAAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CAA 90 bp | GCCACTTTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTGAGGAAGCAGAGCCCTaGCCGCTGTCCGTGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATFPGRREGVNMQVLFTSEEAEP*PLSVNQ Trigger: CTGGTTCACGGACAGCGGCAAGGGCTCTGCTTCCTC...AGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAAAGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CAA 90 bp | AGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCAGGAAACTGGGAGGGGGCTTCTCCCGCTGCTTaGCGGTCTTCTCCTGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: REGVNMQVLFTSPGNWEGASPAA*RSSPAP Trigger: AGGCGCAGGAGAAGACCGCAAAGCAGCGGGAGAAGC...CCCCTCCCAGTTTCCTGGAGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 90 bp | CTTCTCAGCAGCCGCTGCCAGCTCCTTCAACTTCCGCTTCACCAGTaGTCGGTCATGCGAATTGCTGAGCCCCAGGCTCTTCAGTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LLSSRCQLLQLPLHQ*SVMRIAEPQALQFA Trigger: AGCAAACTGAAGAGCCTGGGGCTCAGCAATTCGCATGACCGAGCACTGGTGAAGCGGAAGTTGAAGGAGCTGGCAGCGGCTGCTGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CAA 90 bp | TGCCACCTGCTTCCCCCTGGAAGTCTGCGCCAAACAAGTCCTCGAAATTGGGTTCCCATGGACAGGCGGTaGCTACCCTTCTCCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: CHLLPPGSLRQTSPRNWVPMDRR*LPFSFL Trigger: CAGGAAGGAGAAGGGTAGCAACCGCCTGTCCATGGG...AACCCAATTTCGAGGACTTGTTTGGCGCAGACTTCCAGGGGGAAGCAGGTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS-3UTR CAA 90 bp | GCCACTTTCCCAGGCAGGAGAGAGGGAGTTAACATGCAGGTCCTGTTCACCTCTCCCAGGCTCTTCAGTTaGCTTCCGTCCAGCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ATFPGRREGVNMQVLFTSPRLFS*LPSSCR Trigger: CCTGCAGCTGGACGGAAGCAAACTGAAGAGCCTGGG...AGAGGTGAACAGGACCTGCATGTTAACTCCCTCTCTCCTGCCTGGGAAAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 90 bp | CCAGCAGTTGAGCCCTGGCTTTGTGTAAGCTGCTGTCCAGTCTGGTaGTCTCTGGTACAGCCAAGTCCAGGTCAAAAACTTCATCCACAG | + |
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Preference number: 5 (lower is better) Translates to: PAVEPWLCVSCCPVW*SLVQPSPGQKLHPQ Trigger: CTGTGGATGAAGTTTTTGACCTGGACTTGGCTGTACCAGAGACCACCAGACTGGACAGCAGCTTACACAAAGCCAGGGCTCAACTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS CCA 90 bp | TGGCCAGCAGTTGAGCCCTGGCTTTGTGTAAGCTGCTGTCCAGTCTaGTGGTCTCTGGTACAGCCAAGTCCAGGTCAAAAACTTCATCCA | + |
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Preference number: 5 (lower is better) Translates to: WPAVEPWLCVSCCPV*WSLVQPSPGQKLHP Trigger: TGGATGAAGTTTTTGACCTGGACTTGGCTGTACCAGAGACCACCAGACTGGACAGCAGCTTACACAAAGCCAGGGCTCAACTGCTGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS CAA 90 bp | GGTGGCGAGCCGGAGGTGGCGGCCAGGCCCTCATGCGAGGCGGCGTaGTGCAGGGGCCGGTACCGAGCGAGTGGCGAGGGCGGCGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: GGEPEVAARPSCEAA*CRGRYRASGEGGGS Trigger: CGAACCGCCGCCCTCGCCACTCGCTCGGTACCGGCCCCTGCACAACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | GAGGTGGCGGCCAGGCCCTCATGCGAGGCGGCGTTGTaGAGGGGCCGGTACCGAGCGAGTGGCGAGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: EVAARPSCEAAL*RGRYRASGEGG Trigger: GCCGCCCTCGCCACTCGCTCGGTACCGGCCCCTGCACAACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | CGTGGTGGCGAGCCGGAGGTGGCGGCCAGGCCCTCATaGGAGGCGGCGTTGTGCAGGGGCCGGTACCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: RGGEPEVAARPS*EAALCRGRYRA Trigger: CGCTCGGTACCGGCCCCTGCACAACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CAA 72 bp | CCGGAGGTGGCGGCCAGGCCCTCATGCGAGGCGGCGTaGTGCAGGGGCCGGTACCGAGCGAGTGGCGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PEVAARPSCEAA*CRGRYRASGEG Trigger: GCCCTCGCCACTCGCTCGGTACCGGCCCCTGCACAACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | CGGAGGAGGGTGCAGAGCGTGGTGGCGAGCCGGAGGTaGCGGCCAGGCCCTCATGCGAGGCGGCGTTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: RRRVQSVVASRR*RPGPHARRRCA Trigger: TGCACAACGCCGCCTCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACCCTCCTCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | GCTGGGGGAGCTGTCGGAGGAGGGTGCAGAGCGTGGTaGCGAGCCGGAGGTGGCGGCCAGGCCCTCATGCGA | + |
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Preference number: 6 (lower is better) Translates to: AGGAVGGGCRAW*RAGGGGQALMR Trigger: TCGCATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACCCTCCTCCGACAGCTCCCCCAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | GCCGGTGCAGCGGGCTACCGCAGCCGTCGGTCACCTTaGCTCCGGGCCCATCAGAGCCTTCACCGTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: AGAAGYRSRRSP*LRAHQSLHRPR Trigger: CCGAGGACGGTGAAGGCTCTGATGGGCCCGGAGGCAAGGTGACCGACGGCTGCGGTAGCCCGCTGCACCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS GCA 72 bp | ACGACGCACGAAGCTGGGGGAGCTGTCGGAGGAGGGTaGAGAGCGTGGTGGCGAGCCGGAGGTGGCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TTHEAGGAVGGG*RAWWRAGGGGQ Trigger: CTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACCCTCCTCCGACAGCTCCCCCAGCTTCGTGCGTCGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | CGAGGCGGCGTTGTGCAGGGGCCGGTACCGAGCGAGTaGCGAGGGCGGCGGTTCGTCCTCATCCAGACTGCG | + |
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Preference number: 6 (lower is better) Translates to: RGGVVQGPVPSE*RGRRFVLIQTA Trigger: CGCAGTCTGGATGAGGACGAACCGCCGCCCTCGCCACTCGCTCGGTACCGGCCCCTGCACAACGCCGCCTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS CCA 72 bp | GAAGCTGGGGGAGCTGTCGGAGGAGGGTGCAGAGCGTaGTGGCGAGCCGGAGGTGGCGGCCAGGCCCTCATG | + |
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Preference number: 6 (lower is better) Translates to: EAGGAVGGGCRA*WRAGGGGQALM Trigger: CATGAGGGCCTGGCCGCCACCTCCGGCTCGCCACCACGCTCTGCACCCTCCTCCGACAGCTCCCCCAGCTTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | CACCGTCCTCGGCAGAGCTGGCACTGTCTCGTAGCCTaGAACGGGAAGGCCGGTGTCTCCGGCCCTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HRPRQSWHCLVA*NGKAGVSGPWP Trigger: TGGCCAAGGGCCGGAGACACCGGCCTTCCCGTTCCAGGCTACGAGACAGTGCCAGCTCTGCCGAGGACGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS GCA 72 bp | CTTCCGTCCAGCTGCAGGAGCTGCGGCCCATCCACCTaGCGGGCAGCAAACTCGGCAGCATACTGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LPSSCRSCGPST*RAANSAAYCSR Trigger: CCTGGAGCAGTATGCTGCCGAGTTTGCTGCCCGGCAGGTGGATGGGCCGCAGCTCCTGCAGCTGGACGGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | CTGAGCCCCAGGCTCTTCAGTTTGCTTCCGTCCAGCTaGAGGAGCTGCGGCCCATCCACCTGCCGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSPRLFSLLPSS*RSCGPSTCRAA Trigger: TGCTGCCCGGCAGGTGGATGGGCCGCAGCTCCTGCAGCTGGACGGAAGCAAACTGAAGAGCCTGGGGCTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | CGGGCCCATCAGAGCCTTCACCGTCCTCGGCAGAGCTaGCACTGTCTCGTAGCCTGGAACGGGAAGGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RAHQSLHRPRQS*HCLVAWNGKAG Trigger: ACCGGCCTTCCCGTTCCAGGCTACGAGACAGTGCCAGCTCTGCCGAGGACGGTGAAGGCTCTGATGGGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS CCA 72 bp | TGTGCGGCTCTGCTCGAGGGTAACGACGCACGAAGCTaGGGGAGCTGTCGGAGGAGGGTGCAGAGCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: CAALLEGNDARS*GSCRRRVQSVV Trigger: CACCACGCTCTGCACCCTCCTCCGACAGCTCCCCCAGCTTCGTGCGTCGTTACCCTCGAGCAGAGCCGCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS TCA 72 bp | GCCGGGCAGCAAACTCGGCAGCATACTGCTCCAGGTTaGGGCTGTGTAGCCACTGGCCCACCTGCTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AGQQTRQHTAPG*GCVATGPPAGW Trigger: CCAGCCAGCAGGTGGGCCAGTGGCTACACAGCCTCAACCTGGAGCAGTATGCTGCCGAGTTTGCTGCCCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | GCTGGCATCCCGGCTGTCATCTTCGCTGTGCGGCTCTaGTCGAGGGTAACGACGCACGAAGCTGGGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: AGIPAVIFAVRL*SRVTTHEAGGA Trigger: AGCTCCCCCAGCTTCGTGCGTCGTTACCCTCGAGCAGAGCCGCACAGCGAAGATGACAGCCGGGATGCCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS TCA 72 bp | CGGGAAGGCCGGTGTCTCCGGCCCTTGGCCAGCAGTTaGGCCCTGGCTTTGTGTAAGCTGCTGTCCAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: REGRCLRPLASS*ALALCKLLSSL Trigger: CAGACTGGACAGCAGCTTACACAAAGCCAGGGCTCAACTGCTGGCCAAGGGCCGGAGACACCGGCCTTCCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS GCA 72 bp | CCATCCACCTGCCGGGCAGCAAACTCGGCAGCATACTaGTCCAGGTTGAGGCTGTGTAGCCACTGGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: PSTCRAANSAAY*SRLRLCSHWPT Trigger: GGTGGGCCAGTGGCTACACAGCCTCAACCTGGAGCAGTATGCTGCCGAGTTTGCTGCCCGGCAGGTGGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | AGGCTCTTCAGTTTGCTTCCGTCCAGCTGCAGGAGCTaGGGCCCATCCACCTGCCGGGCAGCAAACTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RLFSLLPSSCRS*GPSTCRAANSA Trigger: TGCCGAGTTTGCTGCCCGGCAGGTGGATGGGCCGCAGCTCCTGCAGCTGGACGGAAGCAAACTGAAGAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | TTGGCATCGTTCTCGCGGCGCCGCAGCTTCTCCCGCTaGTTTGCGGTCTTCTCCTGCGCCTTCCGTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LASFSRRRSFSR*FAVFSCAFRSF Trigger: GAAGGAACGGAAGGCGCAGGAGAAGACCGCAAAGCAGCGGGAGAAGCTGCGGCGCCGCGAGAACGATGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | GTAGCCTGGAACGGGAAGGCCGGTGTCTCCGGCCCTTaGCCAGCAGTTGAGCCCTGGCTTTGTGTAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VAWNGKAGVSGP*PAVEPWLCVSC Trigger: GCAGCTTACACAAAGCCAGGGCTCAACTGCTGGCCAAGGGCCGGAGACACCGGCCTTCCCGTTCCAGGCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS CAA 72 bp | CATCGTTCTCGCGGCGCCGCAGCTTCTCCCGCTGCTTaGCGGTCTTCTCCTGCGCCTTCCGTTCCTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HRSRGAAASPAA*RSSPAPSVPSQ Trigger: CTGAGAAGGAACGGAAGGCGCAGGAGAAGACCGCAAAGCAGCGGGAGAAGCTGCGGCGCCGCGAGAACGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CAA 90 bp | TCTTCTTGGCATCGTTCTCGCGGCGCCGCAGCTTCTCCCGCTGCTTaGCGGTCTTCTCCTGCGCCTTCCGTTCCTTCTCAGCAGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSWHRSRGAAASPAA*RSSPAPSVPSQQPL Trigger: CAGCGGCTGCTGAGAAGGAACGGAAGGCGCAGGAGAAGACCGCAAAGCAGCGGGAGAAGCTGCGGCGCCGCGAGAACGATGCCAAGAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | GCCGGTGTCTCCGGCCCTTGGCCAGCAGTTGAGCCCTaGCTTTGTGTAAGCTGCTGTCCAGTCTGGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: AGVSGPWPAVEP*LCVSCCPVWWS Trigger: AGACCACCAGACTGGACAGCAGCTTACACAAAGCCAGGGCTCAACTGCTGGCCAAGGGCCGGAGACACCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS CAA 72 bp | GTGACCCCCAGGTCCAGGAATTTCCTGCGAGTCTTCTaGTCCAAGCCGATGGTGGGGCTGGCAGGCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VTPRSRNFLRVF*SKPMVGLAGSG Trigger: CCCTGAGCCTGCCAGCCCCACCATCGGCTTGGACAAGAAGACTCGCAGGAAATTCCTGGACCTGGGGGTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | CTTCTCCTGCGCCTTCCGTTCCTTCTCAGCAGCCGCTaGCAGCTCCTTCAACTTCCGCTTCACCAGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLLRLPFLLSSR*QLLQLPLHQCS Trigger: CGAGCACTGGTGAAGCGGAAGTTGAAGGAGCTGGCAGCGGCTGCTGAGAAGGAACGGAAGGCGCAGGAGAAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | GTTGCTACCCTTCTCCTTCCTGCTCCTGCTGGTGGATaGTCGGCGGAGAGTGACCCCCAGGTCCAGGAATTT | + |
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Preference number: 6 (lower is better) Translates to: VATLLLPAPAGG*SAESDPQVQEF Trigger: AAATTCCTGGACCTGGGGGTCACTCTCCGCCGAGCATCCACCAGCAGGAGCAGGAAGGAGAAGGGTAGCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | CTTCTACAGACTCCCTGCTGCCCATGGACAGGCGGTTaGTACCCTTCTCCTTCCTGCTCCTGCTGGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: LLQTPCCPWTGG*YPSPSCSCWWM Trigger: CATCCACCAGCAGGAGCAGGAAGGAGAAGGGTAGCAACCGCCTGTCCATGGGCAGCAGGGAGTCTGTAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | AGCCGCTGCCAGCTCCTTCAACTTCCGCTTCACCAGTaGTCGGTCATGCGAATTGCTGAGCCCCAGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SRCQLLQLPLHQ*SVMRIAEPQAL Trigger: AAGAGCCTGGGGCTCAGCAATTCGCATGACCGAGCACTGGTGAAGCGGAAGTTGAAGGAGCTGGCAGCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | AAGACTGGGACAGCGTGTGGTAGGGATAGGAACACTTaGTCTCCTGTCGAGGACCACCGGGGATCTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: KTGTACGRDRNT*SPVEDHRGSWG Trigger: GCCCCAAGATCCCCGGTGGTCCTCGACAGGAGACCAAGTGTTCCTATCCCTACCACACGCTGTCCCAGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | CCTTGGCCAGCAGTTGAGCCCTGGCTTTGTGTAAGCTaGTGTCCAGTCTGGTGGTCTCTGGTACAGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: PWPAVEPWLCVS*CPVWWSLVQPS Trigger: ACTTGGCTGTACCAGAGACCACCAGACTGGACAGCAGCTTACACAAAGCCAGGGCTCAACTGCTGGCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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| CDS CAA 72 bp | TCATCGCTCAGGGTAGATTCCTGGGAAGCTGACTTCTaGGGGCTGAAGCCCTCGTGTTTGGGGGAACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSLRVDSWEADF*GLKPSCLGEQV Trigger: GACCTGTTCCCCCAAACACGAGGGCTTCAGCCCCAAGAAGTCAGCTTCCCAGGAATCTACCCTGAGCGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CAA 72 bp | TTCAACTTCCGCTTCACCAGTGCTCGGTCATGCGAATaGCTGAGCCCCAGGCTCTTCAGTTTGCTTCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: FNFRFTSARSCE*LSPRLFSLLPS Trigger: GGACGGAAGCAAACTGAAGAGCCTGGGGCTCAGCAATTCGCATGACCGAGCACTGGTGAAGCGGAAGTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS GCA 72 bp | AGCTCCTTCAACTTCCGCTTCACCAGTGCTCGGTCATaGGAATTGCTGAGCCCCAGGCTCTTCAGTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSFNFRFTSARS*ELLSPRLFSLL Trigger: AAGCAAACTGAAGAGCCTGGGGCTCAGCAATTCGCATGACCGAGCACTGGTGAAGCGGAAGTTGAAGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055947.10 |
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| CDS CCA 72 bp | GAGCCCTGGCTTTGTGTAAGCTGCTGTCCAGTCTGGTaGTCTCTGGTACAGCCAAGTCCAGGTCAAAAACTT | + |
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Preference number: 6 (lower is better) Translates to: EPWLCVSCCPVW*SLVQPSPGQKL Trigger: AAGTTTTTGACCTGGACTTGGCTGTACCAGAGACCACCAGACTGGACAGCAGCTTACACAAAGCCAGGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055947.10 ENSMUST00000124735.2 |
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