Pregenerated sensors for SAMD10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038605Ensembl transcript IDs: ENSMUST00000060173.9, ENSMUST00000183836.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGCCGGGCCTGGGGGATCTCTGAGCCGGGCTGTTGAAGGAGCTTaGTTGGCCTGCTGCTGGATGCCCTCTGGCTGCGGGAGTCATGCC | + |
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Preference number: 1 (lower is better) Translates to: RAGPGGSLSRAVEGA*LACCWMPSGCGSHA Trigger: GGCATGACTCCCGCAGCCAGAGGGCATCCAGCAGCAGGCCAATCAAGCTCCTTCAACAGCCCGGCTCAGAGATCCCCCAGGCCCGGCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR GCA 90 bp | AGCTTGATTGGCCTGCTGCTGGATGCCCTCTGGCTGCGGGAGTCATaGCACGTGAGGCTGGTGCCTGGTGTCCGAGGCAGGTGGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: SLIGLLLDALWLRES*HVRLVPGVRGRWQG Trigger: ACCCTGCCACCTGCCTCGGACACCAGGCACCAGCCTCACGTGGCATGACTCCCGCAGCCAGAGGGCATCCAGCAGCAGGCCAATCAAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR TCA 90 bp | TTGGCCTGCTGCTGGATGCCCTCTGGCTGCGGGAGTCATGCCACGTaGGGCTGGTGCCTGGTGTCCGAGGCAGGTGGCAGGGTATGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LACCWMPSGCGSHAT*GWCLVSEAGGRVCS Trigger: AGAACATACCCTGCCACCTGCCTCGGACACCAGGCACCAGCCTCACGTGGCATGACTCCCGCAGCCAGAGGGCATCCAGCAGCAGGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR CCA 90 bp | CTACCCTGTTTGCTGCCAGCAGCACCAGGGGATGGGACCTGGGCTTaGATCTCAGAAGAAGGGTCTATAAGCAGGCAACAACCACCCACC | + |
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Preference number: 1 (lower is better) Translates to: LPCLLPAAPGDGTWA*ISEEGSISRQQPPT Trigger: GGTGGGTGGTTGTTGCCTGCTTATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGCTGGCAGCAAACAGGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR TCA 90 bp | TCACGAACCTGCAGGTGGAGTACCTGCTGCAGCACCTCCTGCCTCTaGGCCTCTTGGGTCAACCCCATTCTCTGCAGCTTATCTGCATTC | + |
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Preference number: 1 (lower is better) Translates to: SRTCRWSTCCSTSCL*ASWVNPILCSLSAF Trigger: GAATGCAGATAAGCTGCAGAGAATGGGGTTGACCCAAGAGGCTCAGAGGCAGGAGGTGCTGCAGCAGGTACTCCACCTGCAGGTTCGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR GCA 90 bp | GGACATTCAAACCCCATTCTAGTTCCAGGCAGCTACCCTGTTTGCTaGCAGCAGCACCAGGGGATGGGACCTGGGCTTGGATCTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: GHSNPILVPGSYPVC*QQHQGMGPGLGSQK Trigger: CTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGCTGGCAGCAAACAGGGTAGCTGCCTGGAACTAGAATGGGGTTTGAATGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR GCA 90 bp | CTGCCTCTGAGCCTCTTGGGTCAACCCCATTCTCTGCAGCTTATCTaGATTCAGTCGAAGCAGAGCTCGGCCAGTGATGGCATGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LPLSLLGQPHSLQLI*IQSKQSSASDGMLG Trigger: TCCCAGCATGCCATCACTGGCCGAGCTCTGCTTCGACTGAATGCAGATAAGCTGCAGAGAATGGGGTTGACCCAAGAGGCTCAGAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR TCA 90 bp | GGTTGGGCCTGCTGTACTCTAGGAGAGCTAGGGGACAGATATACTTaGAAGAGAGCCAAGACAGCTTGGCCCACTGTGTGGCTGATCTGG | + |
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Preference number: 1 (lower is better) Translates to: GWACCTLGELGDRYT*KRAKTAWPTVWLIW Trigger: CCAGATCAGCCACACAGTGGGCCAAGCTGTCTTGGCTCTCTTTCAAGTATATCTGTCCCCTAGCTCTCCTAGAGTACAGCAGGCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR TCA 90 bp | TTCTCTGCAGCTTATCTGCATTCAGTCGAAGCAGAGCTCGGCCAGTaGTGGCATGCTGGGAGAAGGCCTCGACGTAGACGAGGTAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: FSAAYLHSVEAELGQ*WHAGRRPRRRRGSC Trigger: ACAACTACCTCGTCTACGTCGAGGCCTTCTCCCAGCATGCCATCACTGGCCGAGCTCTGCTTCGACTGAATGCAGATAAGCTGCAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR GCA 90 bp | ACTGGTGGGCTGTGCATAGAGTCACCTGTACAGCACTGGAATCCGTaGCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: TGGLCIESPVQHWNP*HLLGLQLEHLGPLS Trigger: TGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGATTCCAGTGCTGTACAGGTGACTCTATGCACAGCCCACCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR TCA 90 bp | GTCTTGTTGGCTCCACAAGACCACTGGCCTTGTCAGGCCACCCAGTaGAGGGCTTGTATGGTACAAACCATAGTGATCAGAGTAGAGCCG | + |
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Preference number: 1 (lower is better) Translates to: VLLAPQDHWPCQATQ*RACMVQTIVIRVEP Trigger: CGGCTCTACTCTGATCACTATGGTTTGTACCATACAAGCCCTTCACTGGGTGGCCTGACAAGGCCAGTGGTCTTGTGGAGCCAACAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR TCA 90 bp | AGAAGGCCTCGACGTAGACGAGGTAGTTGTGAGGACAATGCTTCTTaGGCCACTTGCAAACGTCTTGTTGGCTCCACAAGACCACTGGCC | + |
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Preference number: 1 (lower is better) Translates to: RRPRRRRGSCEDNAS*ATCKRLVGSTRPLA Trigger: GGCCAGTGGTCTTGTGGAGCCAACAAGACGTTTGCAAGTGGCTCAAGAAGCATTGTCCTCACAACTACCTCGTCTACGTCGAGGCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR TCA 90 bp | ACCTGTACAGCACTGGAATCCGTGCCACTTACTGGGTTTGCAGCTTaGGCATCTTGGACCCCTCTCAACCTCACTTCTAACAAGTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: TCTALESVPLTGFAA*ASWTPLNLTSNKWV Trigger: TACCCACTTGTTAGAAGTGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGATTCCAGTGCTGTACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR CCA 90 bp | ACAGAACTAAGATTTAAGGGGAAGACTCATGACTCAGATGGGGGATaGTCACATGTTGGAGGGAGAATAAATAAACAGACTCCCTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: TELRFKGKTHDSDGG*SHVGGRINKQTPWE Trigger: CTCCCAGGGAGTCTGTTTATTTATTCTCCCTCCAACATGTGACCATCCCCCATCTGAGTCATGAGTCTTCCCCTTAAATCTTAGTTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR CCA 90 bp | AAAAGCATGACTTCTTCAAAGGTAAGATTGAGAACATTGCTGAACTaGTGGGCTGTGCATAGAGTCACCTGTACAGCACTGGAATCCGTG | + |
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Preference number: 1 (lower is better) Translates to: KSMTSSKVRLRTLLN*WAVHRVTCTALESV Trigger: CACGGATTCCAGTGCTGTACAGGTGACTCTATGCACAGCCCACCAGTTCAGCAATGTTCTCAATCTTACCTTTGAAGAAGTCATGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR CCA 90 bp | AAAGAACTGCCCTACATGATTTTCTTGGTTGAGAACAGGTTTTCTTaGGAAAGCCACAGAGGTGCACATGAACACAGACAGACAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: KELPYMIFLVENRFS*ESHRGAHEHRQTDR Trigger: TCTGTCTGTCTGTCTGTGTTCATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTTCTCAACCAAGAAAATCATGTAGGGCAGTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCGCCCCTCCTCACGAACCTGCAGGTGGAGTACCTGCTGCAGCACCTCCTGCTCTGAGCCGGGCTGTTaGAGGAGCTTGATTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LRPSSRTCRWSTCCSTSCSEPGC*RSLIGL Trigger: CAGGCCAATCAAGCTCCTTCAACAGCCCGGCTCAGA...GCAGGAGGTGCTGCAGCAGGTACTCCACCTGCAGGTTCGTGAGGAGGGGCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGTGAGAGTGAGCTGCCAGGGTCATCCTCCTTGTCCTCCTTCCTGGCAGGCTTGGCCCACTGTGTaGCTGATCTGGGGGTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: SRVRVSCQGHPPCPPSWQAWPTV*LIWGCP Trigger: CGGGCACCCCCAGATCAGCCACACAGTGGGCCAAGC...CTGCCAGGAAGGAGGACAAGGAGGATGACCCTGGCAGCTCACTCTCACTCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCACCAGGGGATGGGACCTGGGCTTGGATCTCAGAAGAAGGGTCTATAAGCTGGCCTGCTGCTGGATaGCCTCTGGCTGCGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: AAPGDGTWAWISEEGSISWPAAG*PLAAGV Trigger: GACTCCCGCAGCCAGAGGGCATCCAGCAGCAGGCCA...GCTTATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGCAACAGCCCCCAAATACCCAAGGAGGGGTTGTCCAGGTGTCTGGCGATGCAGGCACCAGGACTaGGGGATTCTAGAGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LAATAPKYPRRGCPGVWRCRHQD*GILEAG Trigger: GCCTGCCTCTAGAATCCCCCAGTCCTGGTGCCTGCA...TCGCCAGACACCTGGACAACCCCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGCGTGAGGCTGGTGCCTaGTGTCCGAGGCAGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSSLSSFLAATAPKYPRRREAGA*CPRQVA Trigger: TGCCACCTGCCTCGGACACCAGGCACCAGCCTCACG...CCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGGAATCCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCGGGAGTCATGCCACGTaGGGCTGGTGCCTGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: HWNPCHLLGLQLEHLGPLGSHAT*GWCLVS Trigger: GGACACCAGGCACCAGCCTCACGTGGCATGACTCCC...GAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGATTCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAAGCACCTCCTGCCTCTaGGCCTCTTGGGTCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: GHPPCPPSWQQQPPNTQGSTSCL*ASWVNP Trigger: GGGGTTGACCCAAGAGGCTCAGAGGCAGGAGGTGCT...TCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCGCCCCTCCTCACGAACCTGCAGGTGGAGTACCTGCTGCAGCACCTCCTGCACTCATTCTTGGCTGTaGGCTCTGGTCACAGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LRPSSRTCRWSTCCSTSCTHSWL*ALVTVL Trigger: CAACACTGTGACCAGAGCCCACAGCCAAGAATGAGT...GCAGGAGGTGCTGCAGCAGGTACTCCACCTGCAGGTTCGTGAGGAGGGGCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGCAACAGCCCCCAAATACCCAAGGAGGGGTTGTCCAGGTGTCTGGCGAACTGTGTGGCTGATCTaGGGGTGCCCGGGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LAATAPKYPRRGCPGVWRTVWLI*GCPGKT Trigger: TGTCTTTCCCGGGCACCCCCAGATCAGCCACACAGT...TCGCCAGACACCTGGACAACCCCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGATTCTAGAGGCAGGCAAACACAATAAGGGAGCCCCCTTCCATGGATGGGCTTGGCCCACTGTGTaGCTGATCTGGGGGTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: WGILEAGKHNKGAPFHGWAWPTV*LIWGCP Trigger: CGGGCACCCCCAGATCAGCCACACAGTGGGCCAAGC...CCATCCATGGAAGGGGGCTCCCTTATTGTGTTTGCCTGCCTCTAGAATCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR GCA 90 bp | AAACGTCTTGTTGGCTCCACAAGACCACTGGCCTTGTCAGGCCACCCAGTGAAGTGGCTGCGGGAGTCATaGCACGTGAGGCTGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KRLVGSTRPLALSGHPVKWLRES*HVRLVP Trigger: AGGCACCAGCCTCACGTGGCATGACTCCCGCAGCCA...CTTCACTGGGTGGCCTGACAAGGCCAGTGGTCTTGTGGAGCCAACAAGACGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR CAA 90 bp | GCTACCCTGTTTGCTGCCAGCAGCACCAGGGGATGGGACCTGGGCTaGGATCTCAGAAGAAGGGTCTATAAGCAGGCAACAACCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: ATLFAASSTRGWDLG*DLRRRVYKQATTTH Trigger: GTGGGTGGTTGTTGCCTGCTTATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGCTGGCAGCAAACAGGGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR CAA 90 bp | GGCTCCACAAGACCACTGGCCTTGTCAGGCCACCCAGTGAAGGGCTaGTATGGTACAAACCATAGTGATCAGAGTAGAGCCGGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GSTRPLALSGHPVKG*YGTNHSDQSRAGPG Trigger: CCCAGGCCCGGCTCTACTCTGATCACTATGGTTTGTACCATACAAGCCCTTCACTGGGTGGCCTGACAAGGCCAGTGGTCTTGTGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGCAACAGCCCCCAAATACCCAAGGAGGGGTTGTCCAGGTGTCTGGCGAGATGGGACCTGGGCTTaGATCTCAGAAGAAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LAATAPKYPRRGCPGVWRDGTWA*ISEEGS Trigger: AGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATC...TCGCCAGACACCTGGACAACCCCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGGGTTGTCCAGGTGTCAGAGCCAAGACAGCTTaGCCCACTGTGTGGCTGATC | + |
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Preference number: 2 (lower is better) Translates to: SFLAATAPKYPRRGCPGVRAKTA*PTVWLI Trigger: GATCAGCCACACAGTGGGCCAAGCTGTCTTGGCTCT...GACACCTGGACAACCCCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGGGTTGTCCAGGTGTCGCCCCCTTCCATGGATaGAGGGCATACAGGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: SFLAATAPKYPRRGCPGVAPFHG*RAYRME Trigger: TTCCATCCTGTATGCCCTCCATCCATGGAAGGGGGC...GACACCTGGACAACCCCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACCAGGGGATGGGACCTGGGCTTGGATCTCAGAAGAAGGGTCTATAAGCCACAGTGTTGGGGTCTaGGGTCCAAGTATAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: AAPGDGTWAWISEEGSISHSVGV*GPSIGS Trigger: GCTGCCTATACTTGGACCCCAGACCCCAACACTGTG...GCTTATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGCAGGCACCAGGACTGGGGGATTCTAGAGGCAGGCAAACACAATAAGGGAAGAGCCAAGACAGCTTaGCCCACTGTGTGGCTGATC | + |
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Preference number: 2 (lower is better) Translates to: GCRHQDWGILEAGKHNKGRAKTA*PTVWLI Trigger: GATCAGCCACACAGTGGGCCAAGCTGTCTTGGCTCT...TCCCTTATTGTGTTTGCCTGCCTCTAGAATCCCCCAGTCCTGGTGCCTGCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCAGCACACAGAGGGGACTaGAGGCTGAGCCTCAACTGT | + |
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Preference number: 2 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSAHRGD*RLSLNC Trigger: ACAGTTGAGGCTCAGCCTCCAGTCCCCTCTGTGTGC...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | CTGATCACTGGGCTAGGTTTAGCCACTAGGGTATCCTGCAGGATCCAAAGGGGCGGTGTCCGAGGCAGGTaGCAGGGTATGTTCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LITGLGLATRVSCRIQRGGVRGR*QGMFSA Trigger: AGCTGAGAACATACCCTGCCACCTGCCTCGGACACC...GCCCCTTTGGATCCTGCAGGATACCCTAGTGGCTAAACCTAGCCCAGTGATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR CAA 90 bp | AGGAGAGCTAGGGGACAGATATACTTGAAAGAGAGCCAAGACAGCTaGGCCCACTGTGTGGCTGATCTGGGGGTGCCCGGGAAAGACACA | + |
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Preference number: 2 (lower is better) Translates to: RRARGQIYLKESQDS*AHCVADLGVPGKDT Trigger: TGTGTCTTTCCCGGGCACCCCCAGATCAGCCACACAGTGGGCCAAGCTGTCTTGGCTCTCTTTCAAGTATATCTGTCCCCTAGCTCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATCACTGGGCTAGGTTTAGCCACTAGGGTATCCTGCAGGATCCAAAGGGGCGCTGTTGAAGGAGCTTaGTTGGCCTGCTGCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: LITGLGLATRVSCRIQRGAVEGA*LACCWM Trigger: CATCCAGCAGCAGGCCAATCAAGCTCCTTCAACAGC...GCCCCTTTGGATCCTGCAGGATACCCTAGTGGCTAAACCTAGCCCAGTGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACCAGGGGATGGGACCTGGGCTTGGATCTCAGAAGAAGGGTCTATAAGCCTCTGGTCACAGTGTTaGGGTCTGGGGTCCAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: AAPGDGTWAWISEEGSISLWSQC*GLGSKY Trigger: ATACTTGGACCCCAGACCCCAACACTGTGACCAGAG...GCTTATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGATCTGGGGGTGCCCGGGAAAGACACAGAACTAAGATTTAAGGGGAAGACTAGCAGCACCAGGGGATaGGACCTGGGCTTGGATCTC | + |
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Preference number: 2 (lower is better) Translates to: ADLGVPGKDTELRFKGKTSSTRG*DLGLDL Trigger: GAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGCT...AGTCTTCCCCTTAAATCTTAGTTCTGTGTCTTTCCCGGGCACCCCCAGATCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGTGAGAGTGAGCTGCCAGGGTCATCCTCCTTGTCCTCCTTCCTGGCAGATCCGTGCCACTTACTaGGTTTGCAGCTTGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: SRVRVSCQGHPPCPPSWQIRATY*VCSLSI Trigger: GATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGAT...CTGCCAGGAAGGAGGACAAGGAGGATGACCCTGGCAGCTCACTCTCACTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGATTCTAGAGGCAGGCAAACACAATAAGGGAGCCCCCTTCCATGGATGGCCTTGTCCTCCTTCCTaGCAGCAACAGCCCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: WGILEAGKHNKGAPFHGWPCPPS*QQQPPN Trigger: ATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGG...CCATCCATGGAAGGGGGCTCCCTTATTGTGTTTGCCTGCCTCTAGAATCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCAAGCCTCAACTGTCCCTaGGATTTTAGAGTCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSSLNCP*DFRVPG Trigger: CCCAGGGACTCTAAAATCTCAGGGACAGTTGAGGCT...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGTGTAATGAGCAACCTTaGATCGAGGCCAGCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SSSLSSFLAATAPKYPRRCNEQP*IEASSW Trigger: CCAAGAGCTGGCCTCGATTCAAGGTTGCTCATTACA...CCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCATGTCAGGCCACCCAGTaGAGGGCTTGTATGGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSCQATQ*RACMVQ Trigger: TTGTACCATACAAGCCCTTCACTGGGTGGCCTGACA...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAGGTTTTCTTGGGAAAGCCACAGAGGTGCACATGAACACAGACAGACAGACCGAAGGAAGCTTGGCTaGGCAGCTTCAGGCTCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: NRFSWESHRGAHEHRQTDRRKLG*AASGSA Trigger: GGCGGAGCCTGAAGCTGCTCAGCCAAGCTTCCTTCG...GTCTGTCTGTCTGTGTTCATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTCTGGGGACATTCAAACCCCATTCTAGTTCCAGGCAGCTACCCTGTTTGCTGGAGGTGGAAGTCTTaGTCCTCCCTGATCACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GVWGHSNPILVPGSYPVCWRWKS*SSLITG Trigger: CCCAGTGATCAGGGAGGAGCAAGACTTCCACCTCCA...GCAAACAGGGTAGCTGCCTGGAACTAGAATGGGGTTTGAATGTCCCCAGACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGGTTTTCTTGGGAAAGCCACAGAGGTGCACATGAACACAGACAGACAGACGGCAGCTACCCTGTTTaGTGCCAGCAGCACCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NRFSWESHRGAHEHRQTDGSYPV*CQQHQG Trigger: CCCCTGGTGCTGCTGGCAGCAAACAGGGTAGCTGCC...GTCTGTCTGTCTGTGTTCATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAACTCATTCTTGGCTGTaGGCTCTGGTCACAGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: GHPPCPPSWQQQPPNTQGTHSWL*ALVTVL Trigger: CAACACTGTGACCAGAGCCCACAGCCAAGAATGAGT...TCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAACTGTCCCTGAGATTTTAGAGTCCCTGGGAACGTTGGTAGAGAGCAGAGTGAGCAGCACCAGGGGATaGGACCTGGGCTTGGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: STVPEILESLGTLVESRVSSTRG*DLGLDL Trigger: GAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGCT...CACTCTGCTCTCTACCAACGTTCCCAGGGACTCTAAAATCTCAGGGACAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGGATTCTAGAGGCAGGCAAACACAATAAGGGAGCCCCCTTCCATGGATGGGACTCCCTGGGAGTCTaGGGACATTCAAACCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: WGILEAGKHNKGAPFHGWDSLGV*GHSNPI Trigger: AATGGGGTTTGAATGTCCCCAGACTCCCAGGGAGTC...CCATCCATGGAAGGGGGCTCCCTTATTGTGTTTGCCTGCCTCTAGAATCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAATCCGTGCCACTTACTaGGTTTGCAGCTTGAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: GHPPCPPSWQQQPPNTQGIRATY*VCSLSI Trigger: GATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGAT...TCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTGGAATCCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTTGAAGGAGCTTGATTaGCCTGCTGCTGGATGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: HWNPCHLLGLQLEHLGPLLKELD*PAAGCP Trigger: AGGGCATCCAGCAGCAGGCCAATCAAGCTCCTTCAA...GAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGATTCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAACTGTCCCTGAGATTTTAGAGTCCCTGGGAACGTTGGTAGAGAGCAGAGTGGCTCCACAAGACCACTaGCCTTGTCAGGCCACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: STVPEILESLGTLVESRVAPQDH*PCQATQ Trigger: CTGGGTGGCCTGACAAGGCCAGTGGTCTTGTGGAGC...CACTCTGCTCTCTACCAACGTTCCCAGGGACTCTAAAATCTCAGGGACAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGAGGACAATGCTTCTTaGGCCACTTGCAAACGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GHPPCPPSWQQQPPNTQGEDNAS*ATCKRL Trigger: AAGACGTTTGCAAGTGGCTCAAGAAGCATTGTCCTC...TCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTGAGCCACTTGCAAACGTCTTGTTGGCTCCACAAGACCACTGGCCTTGTCAGAGACACCTGGAGGTaGAAGTCTTGCTCCTCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLSHLQTSCWLHKTTGLVRDTWR*KSCSSL Trigger: CAGGGAGGAGCAAGACTTCCACCTCCAGGTGTCTCT...GACAAGGCCAGTGGTCTTGTGGAGCCAACAAGACGTTTGCAAGTGGCTCAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAACTGTCCCTGAGATTTTAGAGTCCCTGGGAACGTTGGTAGAGAGCAGAGTGTGGAGGTGGAAGTCTTaGTCCTCCCTGATCACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: STVPEILESLGTLVESRVWRWKS*SSLITG Trigger: CCCAGTGATCAGGGAGGAGCAAGACTTCCACCTCCA...CACTCTGCTCTCTACCAACGTTCCCAGGGACTCTAAAATCTCAGGGACAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGATCTGGGGGTGCCCGGGAAAGACACAGAACTAAGATTTAAGGGGAAGACTCTCTGGTCACAGTGTTaGGGTCTGGGGTCCAAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: ADLGVPGKDTELRFKGKTLWSQC*GLGSKY Trigger: ATACTTGGACCCCAGACCCCAACACTGTGACCAGAG...AGTCTTCCCCTTAAATCTTAGTTCTGTGTCTTTCCCGGGCACCCCCAGATCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGAATAAACAGACTCCCTaGGAGTCTGGGGACATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SSSLSSFLAATAPKYPRRNKQTP*ESGDIQ Trigger: TTGAATGTCCCCAGACTCCCAGGGAGTCTGTTTATT...CCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCACCAGGGGATGGGACCTGGGCTTGGATCTCAGAAGAAGGGTCTATAAGCAATAAACAGACTCCCTaGGAGTCTGGGGACATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: AAPGDGTWAWISEEGSISNKQTP*ESGDIQ Trigger: TTGAATGTCCCCAGACTCCCAGGGAGTCTGTTTATT...GCTTATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGGATTCTAGAGGCAGGCAAACACAATAAGGGAGCCCCCTTCCATGGATGGAGAACATTGCTGAACTaGTGGGCTGTGCATAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: WGILEAGKHNKGAPFHGWRTLLN*WAVHRV Trigger: GACTCTATGCACAGCCCACCAGTTCAGCAATGTTCT...CCATCCATGGAAGGGGGCTCCCTTATTGTGTTTGCCTGCCTCTAGAATCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGATCTGGGGGTGCCCGGGAAAGACACAGAACTAAGATTTAAGGGGAAGACTATTCTGACTCATTCTTaGCTGTGGGCTCTGGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: ADLGVPGKDTELRFKGKTILTHS*LWALVT Trigger: TGTGACCAGAGCCCACAGCCAAGAATGAGTCAGAAT...AGTCTTCCCCTTAAATCTTAGTTCTGTGTCTTTCCCGGGCACCCCCAGATCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTCTAGGAGAGCTAGGGGACAGATATACTTGAAAGAGAGCCAAGACAGCTTGAGAGACACCTGGAGGTaGAAGTCTTGCTCCTCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YSRRARGQIYLKESQDSLRDTWR*KSCSSL Trigger: CAGGGAGGAGCAAGACTTCCACCTCCAGGTGTCTCT...CAAGCTGTCTTGGCTCTCTTTCAAGTATATCTGTCCCCTAGCTCTCCTAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGGATTCTAGAGGCAGGCAAACACAATAAGGGAGCCCCCTTCCATGGATGGCATGATTTTCTTGGTTaGGAACAGGTTTTCTTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: WGILEAGKHNKGAPFHGWHDFLG*EQVFLG Trigger: TCCCAAGAAAACCTGTTCTCAACCAAGAAAATCATG...CCATCCATGGAAGGGGGCTCCCTTATTGTGTTTGCCTGCCTCTAGAATCCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR TCA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCAAAGAACTGCCCTACATaGTTTTCTTGGTTGAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSKNCPT*FSWLRT Trigger: TGTTCTCAACCAAGAAAATCATGTAGGGCAGTTCTT...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CAA 90 bp | CCAGGTGTCTGGCGACACATGAAAGAACTGCCCTACATGATTTTCTaGGTTGAGAACAGGTTTTCTTGGGAAAGCCACAGAGGTGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: PGVWRHMKELPYMIF*VENRFSWESHRGAH Trigger: ATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTTCTCAACCAAGAAAATCATGTAGGGCAGTTCTTTCATGTGTCGCCAGACACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGACAGACACAAACACACATTCTTCAATATGGTCTCTACTAAGAGCCAGGACATTGCTGAACTGGTaGGCTGTGCATAGAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: RQTDTNTHSSIWSLLRARTLLNW*AVHRVT Trigger: GGTGACTCTATGCACAGCCCACCAGTTCAGCAATGT...CCTGGCTCTTAGTAGAGACCATATTGAAGAATGTGTGTTTGTGTCTGTCTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CAA 90 bp | AAGCTGTTTAAAAGCATGACTTCTTCAAAGGTAAGATTGAGAACATaGCTGAACTGGTGGGCTGTGCATAGAGTCACCTGTACAGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: KLFKSMTSSKVRLRT*LNWWAVHRVTCTAL Trigger: CAGTGCTGTACAGGTGACTCTATGCACAGCCCACCAGTTCAGCAATGTTCTCAATCTTACCTTTGAAGAAGTCATGCTTTTAAACAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR GCA 72 bp | GGCCTGCTGCTGGATGCCCTCTGGCTGCGGGAGTCATaGCACGTGAGGCTGGTGCCTGGTGTCCGAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GLLLDALWLRES*HVRLVPGVRGR Trigger: CCTGCCTCGGACACCAGGCACCAGCCTCACGTGGCATGACTCCCGCAGCCAGAGGGCATCCAGCAGCAGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR TCA 72 bp | CCTGGGGGATCTCTGAGCCGGGCTGTTGAAGGAGCTTaGTTGGCCTGCTGCTGGATGCCCTCTGGCTGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGGSLSRAVEGA*LACCWMPSGCG Trigger: CCCGCAGCCAGAGGGCATCCAGCAGCAGGCCAATCAAGCTCCTTCAACAGCCCGGCTCAGAGATCCCCCAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | CTGGCTGCGGGAGTCATGCCACGTGAGGCTGGTGCCTaGTGTCCGAGGCAGGTGGCAGGGTATGTTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LAAGVMPREAGA*CPRQVAGYVLS Trigger: GCTGAGAACATACCCTGCCACCTGCCTCGGACACCAGGCACCAGCCTCACGTGGCATGACTCCCGCAGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | GTGAGCTGCCAGGGTCATCCTCCTTGTCCTCCTTCCTaGCAGCAACAGCCCCCAAATACCCAAGGAGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSCQGHPPCPPS*QQQPPNTQGGV Trigger: AACCCCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGACCCTGGCAGCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | GGACAGAGAGGGCCCTCTGGCTGCAGGCACCAGGACTaGGGGATTCTAGAGGCAGGCAAACACAATAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GQRGPSGCRHQD*GILEAGKHNKG Trigger: TCCCTTATTGTGTTTGCCTGCCTCTAGAATCCCCCAGTCCTGGTGCCTGCAGCCAGAGGGCCCTCTCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCAGCACCAGGGGATGGGACCTGGGCTTGGATCTCAGAAGAAGGGTCTATACTGGAGGTGGAAGTCTaGCTCCTCCCTGATCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PAAPGDGTWAWISEEGSILEVEV*LLPDHW Trigger: CCAGTGATCAGGGAGGAGCAAGACTTCCACCTCCAG...TATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGGATTCTAGAGGCAGGCAAACACAATAAGGGAGCCCCCTTCCATGGATGGAATCGAGGCCAGCTCTaGGCACACAGAGGGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: WGILEAGKHNKGAPFHGWNRGQL*AHRGDW Trigger: CCAGTCCCCTCTGTGTGCCAAGAGCTGGCCTCGATT...CCATCCATGGAAGGGGGCTCCCTTATTGTGTTTGCCTGCCTCTAGAATCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCACCAGGGGATGGGACCTGGGCTTGGATCTCAGAAGAAGGGTCTATAAGCCTGCCTCTGAGCCTCTaGGGTCAACCCCATTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AAPGDGTWAWISEEGSISLPLSL*GQPHSL Trigger: CAGAGAATGGGGTTGACCCAAGAGGCTCAGAGGCAG...GCTTATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR TCA 72 bp | ATAGTGATCAGAGTAGAGCCGGGCCTGGGGGATCTCTaGGCCGGGCTGTTGAAGGAGCTTGATTGGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IVIRVEPGLGDL*AGLLKELDWPA Trigger: AGCAGGCCAATCAAGCTCCTTCAACAGCCCGGCTCAGAGATCCCCCAGGCCCGGCTCTACTCTGATCACTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR GCA 72 bp | CTGGGAACGTTGGTAGAGAGCAGAGTGAGAGTGAGCTaGCAGGGTCATCCTCCTTGTCCTCCTTCCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGTLVESRVRVS*QGHPPCPPSWQ Trigger: CTGCCAGGAAGGAGGACAAGGAGGATGACCCTGGCAGCTCACTCTCACTCTGCTCTCTACCAACGTTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCAGGATGGGACCTGGGCTaGGATCTCAGAAGAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSGWDLG*DLRRRV Trigger: GACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCC...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR TCA 72 bp | GCTTATCTGCATTCAGTCGAAGCAGAGCTCGGCCAGTaGTGGCATGCTGGGAGAAGGCCTCGACGTAGACGA | + |
|
Preference number: 3 (lower is better) Translates to: AYLHSVEAELGQ*WHAGRRPRRRR Trigger: TCGTCTACGTCGAGGCCTTCTCCCAGCATGCCATCACTGGCCGAGCTCTGCTTCGACTGAATGCAGATAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAACCCCATTCTCTGCAGCTTATCTGCATTCAGTCGAAGCAGAGCTCGGCCAGGCTCTGGTCACAGTGTaGGGGTCTGGGGTCCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: STPFSAAYLHSVEAELGQALVTV*GSGVQV Trigger: TACTTGGACCCCAGACCCCAACACTGTGACCAGAGC...CTGGCCGAGCTCTGCTTCGACTGAATGCAGATAAGCTGCAGAGAATGGGGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTCTGGGGACATTCAAACCCCATTCTAGTTCCAGGCAGCTACCCTGTTTGCGGATGGGACCTGGGCTaGGATCTCAGAAGAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GVWGHSNPILVPGSYPVCGWDLG*DLRRRV Trigger: GACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCC...GCAAACAGGGTAGCTGCCTGGAACTAGAATGGGGTTTGAATGTCCCCAGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | GGACAATGCTTCTTGAGCCACTTGCAAACGTCTTGTTaGCTCCACAAGACCACTGGCCTTGTCAGGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: GQCFLSHLQTSC*LHKTTGLVRPP Trigger: GGGTGGCCTGACAAGGCCAGTGGTCTTGTGGAGCCAACAAGACGTTTGCAAGTGGCTCAAGAAGCATTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGATCTGGGGGTGCCCGGGAAAGACACAGAACTAAGATTTAAGGGGAAGACTCTGGAGGTGGAAGTCTaGCTCCTCCCTGATCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: ADLGVPGKDTELRFKGKTLEVEV*LLPDHW Trigger: CCAGTGATCAGGGAGGAGCAAGACTTCCACCTCCAG...AGTCTTCCCCTTAAATCTTAGTTCTGTGTCTTTCCCGGGCACCCCCAGATCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGGTTTTCTTGGGAAAGCCACAGAGGTGCACATGAACACAGACAGACAGACAGGCAGCTACCCTGTTaGCTGCCAGCAGCACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: NRFSWESHRGAHEHRQTDRQLPC*LPAAPG Trigger: CCCTGGTGCTGCTGGCAGCAAACAGGGTAGCTGCCT...GTCTGTCTGTCTGTGTTCATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | AGGGAGCCCCCTTCCATGGATGGAGGGCATACAGGATaGAAGATGCCAGGCCAATGGCCCAAATTAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: REPPSMDGGHTG*KMPGQWPKLTV Trigger: TACAGTTAATTTGGGCCATTGGCCTGGCATCTTCCATCCTGTATGCCCTCCATCCATGGAAGGGGGCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGAATCCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCAATTCTGACTCATTCTaGGCTGTGGGCTCTGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HWNPCHLLGLQLEHLGPLNSDSF*AVGSGH Trigger: GTGACCAGAGCCCACAGCCAAGAATGAGTCAGAATT...GAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGATTCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR TCA 72 bp | GCACTGGAATCCGTGCCACTTACTGGGTTTGCAGCTTaGGCATCTTGGACCCCTCTCAACCTCACTTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALESVPLTGFAA*ASWTPLNLTSN Trigger: GTTAGAAGTGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGATTCCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | AGTCACCTGTACAGCACTGGAATCCGTGCCACTTACTaGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHLYSTGIRATY*VCSLSILDPSQ Trigger: TTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGATTCCAGTGCTGTACAGGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCAAGGGGACAGATATACTaGAAAGAGAGCCAAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSRGQIY*KESQDS Trigger: GCTGTCTTGGCTCTCTTTCAAGTATATCTGTCCCCT...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAACTGTCCCTGAGATTTTAGAGTCCCTGGGAACGTTGGTAGAGAGCAGAGTGTGCAGCTTGAGCATCTaGGACCCCTCTCAACCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: STVPEILESLGTLVESRVCSLSI*DPSQPH Trigger: GTGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCA...CACTCTGCTCTCTACCAACGTTCCCAGGGACTCTAAAATCTCAGGGACAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTCTAGGAGAGCTAGGGGACAGATATACTTGAAAGAGAGCCAAGACAGCTTGGCTCTGGTCACAGTGTaGGGGTCTGGGGTCCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: YSRRARGQIYLKESQDSLALVTV*GSGVQV Trigger: TACTTGGACCCCAGACCCCAACACTGTGACCAGAGC...CAAGCTGTCTTGGCTCTCTTTCAAGTATATCTGTCCCCTAGCTCTCCTAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGACAGACACAAACACACATTCTTCAATATGGTCTCTACTAAGAGCCAGGAGGCAGCTACCCTGTTaGCTGCCAGCAGCACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQTDTNTHSSIWSLLRARRQLPC*LPAAPG Trigger: CCCTGGTGCTGCTGGCAGCAAACAGGGTAGCTGCCT...CCTGGCTCTTAGTAGAGACCATATTGAAGAATGTGTGTTTGTGTCTGTCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR TCA 72 bp | TGCTGTACTCTAGGAGAGCTAGGGGACAGATATACTTaGAAGAGAGCCAAGACAGCTTGGCCCACTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CCTLGELGDRYT*KRAKTAWPTVW Trigger: CCACACAGTGGGCCAAGCTGTCTTGGCTCTCTTTCAAGTATATCTGTCCCCTAGCTCTCCTAGAGTACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
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| 3UTR GCA 72 bp | CTGTGCATAGAGTCACCTGTACAGCACTGGAATCCGTaGCACTTACTGGGTTTGCAGCTTGAGCATCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCIESPVQHWNP*HLLGLQLEHLG Trigger: TCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGGATTCCAGTGCTGTACAGGTGACTCTATGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR TCA 72 bp | CGACGTAGACGAGGTAGTTGTGAGGACAATGCTTCTTaGGCCACTTGCAAACGTCTTGTTGGCTCCACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRRRGSCEDNAS*ATCKRLVGSTR Trigger: TCTTGTGGAGCCAACAAGACGTTTGCAAGTGGCTCAAGAAGCATTGTCCTCACAACTACCTCGTCTACGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | GATGGAGGGCATACAGGATGGAAGATGCCAGGCCAATaGCCCAAATTAACTGTAATGAGCAACCTTGAATCG | + |
|
Preference number: 3 (lower is better) Translates to: DGGHTGWKMPGQ*PKLTVMSNLES Trigger: CGATTCAAGGTTGCTCATTACAGTTAATTTGGGCCATTGGCCTGGCATCTTCCATCCTGTATGCCCTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR TCA 72 bp | GAACAGGTTTTCTTGGGAAAGCCACAGAGGTGCACATaGACACAGACAGACAGACAGACACAAACACACATT | + |
|
Preference number: 3 (lower is better) Translates to: EQVFLGKPQRCT*TQTDRQTQTHI Trigger: AATGTGTGTTTGTGTCTGTCTGTCTGTCTGTGTTCATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | ACTTCTTCAAAGGTAAGATTGAGAACATTGCTGAACTaGTGGGCTGTGCATAGAGTCACCTGTACAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: TSSKVRLRTLLN*WAVHRVTCTAL Trigger: CAGTGCTGTACAGGTGACTCTATGCACAGCCCACCAGTTCAGCAATGTTCTCAATCTTACCTTTGAAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | CCCTACATGATTTTCTTGGTTGAGAACAGGTTTTCTTaGGAAAGCCACAGAGGTGCACATGAACACAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: PYMIFLVENRFS*ESHRGAHEHRQ Trigger: CTGTCTGTGTTCATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTTCTCAACCAAGAAAATCATGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGACAGACACAAACACACATTCTTCAATATGGTCTCTACTAAGAGCCAGGGTAAGATTGAGAACATaGCTGAACTGGTGGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RQTDTNTHSSIWSLLRARVRLRT*LNWWAV Trigger: CACAGCCCACCAGTTCAGCAATGTTCTCAATCTTAC...CCTGGCTCTTAGTAGAGACCATATTGAAGAATGTGTGTTTGTGTCTGTCTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR TCA 72 bp | ACACATGAAAGAACTGCCCTACATGATTTTCTTGGTTaGGAACAGGTTTTCTTGGGAAAGCCACAGAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: THERTALHDFLG*EQVFLGKPQRC Trigger: GCACCTCTGTGGCTTTCCCAAGAAAACCTGTTCTCAACCAAGAAAATCATGTAGGGCAGTTCTTTCATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CCA 72 bp | AGATTTAAGGGGAAGACTCATGACTCAGATGGGGGATaGTCACATGTTGGAGGGAGAATAAATAAACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RFKGKTHDSDGG*SHVGGRINKQT Trigger: AGTCTGTTTATTTATTCTCCCTCCAACATGTGACCATCCCCCATCTGAGTCATGAGTCTTCCCCTTAAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGCAACAGCCCCCAAATACCCAAGGAGGGGTTGTCCAGGTGTCTGGCGAAGCACCTCCTGCCTCTaGGCCTCTTGGGTCAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAATAPKYPRRGCPGVWRSTSCL*ASWVNP Trigger: GGGGTTGACCCAAGAGGCTCAGAGGCAGGAGGTGCT...TCGCCAGACACCTGGACAACCCCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR GCA 90 bp | CTGACTCATTCTTGGCTGTGGGCTCTGGTCACAGTGTTGGGGTCTGGGGTCCAATGGCCTGCTGCTGGATaGCCTCTGGCTGCGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTHSWLWALVTVLGSGVQWPAAG*PLAAGV Trigger: GACTCCCGCAGCCAGAGGGCATCCAGCAGCAGGCCA...TTGGACCCCAGACCCCAACACTGTGACCAGAGCCCACAGCCAAGAATGAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR CCA 90 bp | GGTCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGACGTGAGGCTGGTGCCTaGTGTCCGAGGCAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHPPCPPSWQQQPPNTQGREAGA*CPRQVA Trigger: TGCCACCTGCCTCGGACACCAGGCACCAGCCTCACG...TCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR TCA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCAGGGAGTCATGCCACGTaGGGCTGGTGCCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSGSHAT*GWCLVS Trigger: GGACACCAGGCACCAGCCTCACGTGGCATGACTCCC...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR TCA 90 bp | CTGACTCATTCTTGGCTGTGGGCTCTGGTCACAGTGTTGGGGTCTGGGGTCCAAGCAGAGCTCGGCCAGTaGTGGCATGCTGGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTHSWLWALVTVLGSGVQAELGQ*WHAGRR Trigger: CCTTCTCCCAGCATGCCATCACTGGCCGAGCTCTGC...TTGGACCCCAGACCCCAACACTGTGACCAGAGCCCACAGCCAAGAATGAGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCACCAGGGGATGGGACCTGGGCTTGGATCTCAGAAGAAGGGTCTATAAGCCGGCCAGTGATGGCATaGTGGGAGAAGGCCTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: AAPGDGTWAWISEEGSISRPVMA*WEKAST Trigger: CGTCGAGGCCTTCTCCCAGCATGCCATCACTGGCCG...GCTTATAGACCCTTCTTCTGAGATCCAAGCCCAGGTCCCATCCCCTGGTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGTGAGAGTGAGCTGCCAGGGTCATCCTCCTTGTCCTCCTTCCTGGCAGGAGTCTGGCAGAAGCTaGAATGGGCAGAGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRVRVSCQGHPPCPPSWQESGRS*NGQRRP Trigger: TGGACGCCTCTGCCCATTTCAGCTTCTGCCAGACTC...CTGCCAGGAAGGAGGACAAGGAGGATGACCCTGGCAGCTCACTCTCACTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR GCA 90 bp | CTGACTCATTCTTGGCTGTGGGCTCTGGTCACAGTGTTGGGGTCTGGGGTCCAACCCTCCTCACGAACCTaGAGGTGGAGTACCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTHSWLWALVTVLGSGVQPSSRT*RWSTCC Trigger: GCAGCAGGTACTCCACCTGCAGGTTCGTGAGGAGGG...TTGGACCCCAGACCCCAACACTGTGACCAGAGCCCACAGCCAAGAATGAGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR TCA 90 bp | TCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGTCTGAGCCGGGCTGTTaGAGGAGCTTGATTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSSFLAATAPKYPRRSEPGC*RSLIGL Trigger: CAGGCCAATCAAGCTCCTTCAACAGCCCGGCTCAGA...CCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR CCA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCAGCTCCACAAGACCACTaGCCTTGTCAGGCCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSAPQDH*PCQATQ Trigger: CTGGGTGGCCTGACAAGGCCAGTGGTCTTGTGGAGC...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR CCA 90 bp | TCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGTCACGAACCTGCAGGTaGAGTACCTGCTGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSSFLAATAPKYPRRSRTCR*STCCST Trigger: GGTGCTGCAGCAGGTACTCCACCTGCAGGTTCGTGA...CCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| 3UTR CAA 72 bp | CCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGGGTaGTCCAGGTGTCTGGCGACACATGAAAGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSNSPQIPKEG*SRCLATHERTA Trigger: GGCAGTTCTTTCATGTGTCGCCAGACACCTGGACAACCCCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| CDS-3UTR TCA 90 bp | TCATCCTCCTTGTCCTCCTTCCTGGCAGCAACAGCCCCCAAATACCCAAGGAGGGCTGTTGAAGGAGCTTaGTTGGCCTGCTGCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSSFLAATAPKYPRRAVEGA*LACCWM Trigger: CATCCAGCAGCAGGCCAATCAAGCTCCTTCAACAGC...CCTCCTTGGGTATTTGGGGGCTGTTGCTGCCAGGAAGGAGGACAAGGAGGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGTGAGAGTGAGCTGCCAGGGTCATCCTCCTTGTCCTCCTTCCTGGCAGTTGAAGGAGCTTGATTaGCCTGCTGCTGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRVRVSCQGHPPCPPSWQLKELD*PAAGCP Trigger: AGGGCATCCAGCAGCAGGCCAATCAAGCTCCTTCAA...CTGCCAGGAAGGAGGACAAGGAGGATGACCCTGGCAGCTCACTCTCACTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| 3UTR CAA 72 bp | GTAGTGCCTCTCCAGAGACACCTGGAGGTGGAAGTCTaGCTCCTCCCTGATCACTGGGCTAGGTTTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVPLQRHLEVEV*LLPDHWARFSH Trigger: GTGGCTAAACCTAGCCCAGTGATCAGGGAGGAGCAAGACTTCCACCTCCAGGTGTCTCTGGAGAGGCACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| CDS-3UTR TCA 90 bp | CTGACTCATTCTTGGCTGTGGGCTCTGGTCACAGTGTTGGGGTCTGGGGTCCAATGTCAGGCCACCCAGTaGAGGGCTTGTATGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LTHSWLWALVTVLGSGVQCQATQ*RACMVQ Trigger: TTGTACCATACAAGCCCTTCACTGGGTGGCCTGACA...TTGGACCCCAGACCCCAACACTGTGACCAGAGCCCACAGCCAAGAATGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| 3UTR CAA 72 bp | ATCCAAAGGGGCTGTAGGGCCAATTCTGACTCATTCTaGGCTGTGGGCTCTGGTCACAGTGTTGGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQRGCRANSDSF*AVGSGHSVGVW Trigger: CCAGACCCCAACACTGTGACCAGAGCCCACAGCCAAGAATGAGTCAGAATTGGCCCTACAGCCCCTTTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGTTTTCTTGGGAAAGCCACAGAGGTGCACATGAACACAGACAGACAGACTGGCTGCGGGAGTCATaGCACGTGAGGCTGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRFSWESHRGAHEHRQTDWLRES*HVRLVP Trigger: AGGCACCAGCCTCACGTGGCATGACTCCCGCAGCCA...GTCTGTCTGTCTGTGTTCATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| 3UTR CAA 72 bp | AGGACAATGCTTCTTGAGCCACTTGCAAACGTCTTGTaGGCTCCACAAGACCACTGGCCTTGTCAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RTMLLEPLANVL*APQDHWPCQAT Trigger: GGTGGCCTGACAAGGCCAGTGGTCTTGTGGAGCCAACAAGACGTTTGCAAGTGGCTCAAGAAGCATTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| 3UTR CAA 72 bp | GTGAGGACAATGCTTCTTGAGCCACTTGCAAACGTCTaGTTGGCTCCACAAGACCACTGGCCTTGTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRTMLLEPLANV*LAPQDHWPCQA Trigger: GGCCTGACAAGGCCAGTGGTCTTGTGGAGCCAACAAGACGTTTGCAAGTGGCTCAAGAAGCATTGTCCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATCTGGGGGTGCCCGGGAAAGACACAGAACTAAGATTTAAGGGGAAGACTTGGCAGAAGCTGAAATaGGCAGAGGCGTCCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLGVPGKDTELRFKGKTWQKLK*AEASTS Trigger: GGATGTGGACGCCTCTGCCCATTTCAGCTTCTGCCA...AGTCTTCCCCTTAAATCTTAGTTCTGTGTCTTTCCCGGGCACCCCCAGATCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| 3UTR CAA 72 bp | AGACCACTGGCCTTGTCAGGCCACCCAGTGAAGGGCTaGTATGGTACAAACCATAGTGATCAGAGTAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLALSGHPVKG*YGTNHSDQSRA Trigger: GGCTCTACTCTGATCACTATGGTTTGTACCATACAAGCCCTTCACTGGGTGGCCTGACAAGGCCAGTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183836.2 |
||
| CDS-3UTR TCA 90 bp | GCCCACTGTGTGGCTGATCTGGGGGTGCCCGGGAAAGACACAGAACTAAGATTTGAGGACAATGCTTCTTaGGCCACTTGCAAACGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHCVADLGVPGKDTELRFEDNAS*ATCKRL Trigger: AAGACGTTTGCAAGTGGCTCAAGAAGCATTGTCCTC...AAATCTTAGTTCTGTGTCTTTCCCGGGCACCCCCAGATCAGCCACACAGTGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR CCA 90 bp | AACAGGTTTTCTTGGGAAAGCCACAGAGGTGCACATGAACACAGACAGACAGACGGTGTCCGAGGCAGGTaGCAGGGTATGTTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRFSWESHRGAHEHRQTDGVRGR*QGMFSA Trigger: AGCTGAGAACATACCCTGCCACCTGCCTCGGACACC...GTCTGTCTGTCTGTGTTCATGTGCACCTCTGTGGCTTTCCCAAGAAAACCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR TCA 90 bp | AGACAGACAGACACAAACACACATTCTTCAATATGGTCTCTACTAAGAGCCAGGCGAAGGAAGCTTGGCTaGGCAGCTTCAGGCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQTDTNTHSSIWSLLRARRRKLG*AASGSA Trigger: GGCGGAGCCTGAAGCTGCTCAGCCAAGCTTCCTTCG...CCTGGCTCTTAGTAGAGACCATATTGAAGAATGTGTGTTTGTGTCTGTCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR GCA 90 bp | CCGTGCCACTTACTGGGTTTGCAGCTTGAGCATCTTGGACCCCTCTCAACCTCAGTCAACCCCATTCTCTaGAGCTTATCTGCATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCHLLGLQLEHLGPLSTSVNPIL*SLSAFS Trigger: ACTGAATGCAGATAAGCTGCAGAGAATGGGGTTGAC...TGAGGTTGAGAGGGGTCCAAGATGCTCAAGCTGCAAACCCAGTAAGTGGCACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR CCA 90 bp | AGACAGACAGACACAAACACACATTCTTCAATATGGTCTCTACTAAGAGCCAGGCTGCTGGATGCCCTCTaGCTGCGGGAGTCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQTDTNTHSSIWSLLRARLLDAL*LRESCH Trigger: GTGGCATGACTCCCGCAGCCAGAGGGCATCCAGCAG...CCTGGCTCTTAGTAGAGACCATATTGAAGAATGTGTGTTTGTGTCTGTCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| 3UTR CAA 72 bp | TGGCGACACATGAAAGAACTGCCCTACATGATTTTCTaGGTTGAGAACAGGTTTTCTTGGGAAAGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRHMKELPYMIF*VENRFSWESHR Trigger: TCTGTGGCTTTCCCAAGAAAACCTGTTCTCAACCAAGAAAATCATGTAGGGCAGTTCTTTCATGTGTCGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| 3UTR CAA 72 bp | AAAAGCATGACTTCTTCAAAGGTAAGATTGAGAACATaGCTGAACTGGTGGGCTGTGCATAGAGTCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSMTSSKVRLRT*LNWWAVHRVTC Trigger: ACAGGTGACTCTATGCACAGCCCACCAGTTCAGCAATGTTCTCAATCTTACCTTTGAAGAAGTCATGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060173.9 ENSMUST00000183836.2 |
||
| CDS CCA 90 bp | CGGGAGTCATGCCACGTGAGGCTGGTGCCTGGTGTCCGAGGCAGGTaGCAGGGTATGTTCTCAGCTGATACTGTGTGTTCTAGGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RESCHVRLVPGVRGR*QGMFSADTVCSRRV Trigger: GACTCTCCTAGAACACACAGTATCAGCTGAGAACATACCCTGCCACCTGCCTCGGACACCAGGCACCAGCCTCACGTGGCATGACTCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS TCA 90 bp | TGTTCTCAGCTGATACTGTGTGTTCTAGGAGAGTCTGGCAGAAGCTaGAATGGGCAGAGGCGTCCACATCCGGACGCTCCCCGAAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CSQLILCVLGESGRS*NGQRRPHPDAPRSP Trigger: CGGGCTTCGGGGAGCGTCCGGATGTGGACGCCTCTGCCCATTTCAGCTTCTGCCAGACTCTCCTAGAACACACAGTATCAGCTGAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGTGAGAGTGAGCTGCCAGGGTCATCCTCCTTGTCCTCCTTCCTGGCAGTGCTTCTTGAGCCACTaGCAAACGTCTTGTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRVRVSCQGHPPCPPSWQCFLSH*QTSCWL Trigger: GAGCCAACAAGACGTTTGCAAGTGGCTCAAGAAGCA...CTGCCAGGAAGGAGGACAAGGAGGATGACCCTGGCAGCTCACTCTCACTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
||
| CDS TCA 72 bp | CTGATACTGTGTGTTCTAGGAGAGTCTGGCAGAAGCTaGAATGGGCAGAGGCGTCCACATCCGGACGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LILCVLGESGRS*NGQRRPHPDAP Trigger: GGGAGCGTCCGGATGTGGACGCCTCTGCCCATTTCAGCTTCTGCCAGACTCTCCTAGAACACACAGTATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060173.9 |
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