Pregenerated sensors for SALL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031665Ensembl transcript IDs: ENSMUST00000034090.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCCTCGGGCGACATTCTaGGAGGAAGCACTCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNPRATF*EEALWQ Trigger: CTGCCAGAGTGCTTCCTCTCAGAATGTCGCCCGAGG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACATGCCTGCACTCTGTTaGCAAAGCAAGGTTATAGCA | + |
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Preference number: 3 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNMPALC*QSKVIA Trigger: TGCTATAACCTTGCTTTGCAAACAGAGTGCAGGCAT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCATGGGGCCATCCACTaGGAGCCGCCGGCCCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNHGAIH*EPPAPA Trigger: CGCCGGGGCCGGCGGCTCTCAGTGGATGGCCCCATG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCCGCCGGCCCCGGCGTaGAGGGGTGCTGTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNPPAPA*RGAVPH Trigger: ATGTGGAACAGCACCCCTGCACGCCGGGGCCGGCGG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAGACGGCCGGGGAGCTaGCATGGGAGGCACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNRRPGS*HGRHQH Trigger: ATGCTGGTGCCTCCCATGTCAGCTCCCCGGCCGTCT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAGGCTGGCCTGCAGCTaGTCCGCCAGGCCAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNRLACS*SARPAL Trigger: CAATGCTGGCCTGGCGGAGCAGCTGCAGGCCAGCCT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTGGAGGGATGGACATaGCGTAGGGGATGCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLEGWT*RRGCRC Trigger: GCACCGGCATCCCCTACGGCATGTCCATCCCTCCAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCCCGGCGTGCAGGGGTaGTGTTCCACATATGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNPGVQG*CSTYGC Trigger: GCACCCATATGTGGAACAGCACCCCTGCACGCCGGG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGGCCCCACTCGCTGTaGCTTTTCCTCCATGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNWPHSL*LFLHAG Trigger: CCCGGCATGGAGGAAAAGCCACAGCGAGTGGGGCCA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTGGGGCGACTTGGTTaGCCCTTCTCTGTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVGRLG*PFSVSP Trigger: TGGGGACACAGAGAAGGGTCAACCAAGTCGCCCCAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGGCAGGTCTGCGCTCTaGGAGGCCAGCAGCAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNGRSAL*EASSSI Trigger: AATACTGCTGCTGGCCTCTCAGAGCGCAGACCTGCC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGCAACAGAGGGTTGGTaGAGGTGGTCCCTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNATEGW*RWSLLD Trigger: GTCCAGGAGGGACCACCTTCACCAACCCTCTGTTGC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGGAGGTGCCGGAGCTaGTCTGAGGTAGCTGGACGT | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNWRCRS*SEVAGR Trigger: ACGTCCAGCTACCTCAGAGCAGCTCCGGCACCTCCA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGGTGGTGGTGGCAACTaGGACCTCCACCTCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNGGGGN*DLHLHG Trigger: TCCATGGAGGTGGAGGTCCCAGTTGCCACCACCACC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGGTGGTGGTGGTGGTaGCAACTGGGACCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNWWWWW*QLGPPP Trigger: AGGTGGAGGTCCCAGTTGCCACCACCACCACCACCA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGCCGGGGAGCTGACATaGGAGGCACCAGCATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNAGELT*EAPALE Trigger: TTCCAATGCTGGTGCCTCCCATGTCAGCTCCCCGGC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAGAGGTTGTGATCGCTaGGGTACCCGTGGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNRGCDR*GTRGRA Trigger: GGCTCTTCCACGGGTACCTCAGCGATCACAACCTCT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGGAGTCACTTTTGACTaGGCCTTGGGGACTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNGVTFD*ALGTGS Trigger: GCTGCCAGTCCCCAAGGCTCAGTCAAAAGTGACTCC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCCTCCACGAAGCGGGTaGAACGGAAGTTGGTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNPPRSG*NGSWFR Trigger: ACGGAACCAACTTCCGTTTCACCCGCTTCGTGGAGG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGAAGGGCGTGAGGCTTaGGAGAGTTGGAGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNEGREA*ESWRQW Trigger: CCATTGCCTCCAACTCTCCCAAGCCTCACGCCCTTC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTTGCCACCAAAGGGTaGCACAGCAGACCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLATKG*HSRPFH Trigger: GTGGAAGGGTCTGCTGTGCCACCCTTTGGTGGCAAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTAGTTGTCAGGGACTaGGGTGTTGGGGATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVVVRD*GVGDLA Trigger: GGCCAGATCCCCAACACCCCAGTCCCTGACAACTAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAAGCGTCCGCTGACTTaGGTGTGTCTGGGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNKRPLT*VCLGCC Trigger: GCAGCATCCCAGACACACCCAAGTCAGCGGACGCTT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGGCCGAGGTTGGAACTaGGCTCAAAGAGCTGCGATG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNGRGWN*AQRAAM Trigger: CATCGCAGCTCTTTGAGCCCAGTTCCAACCTCGGCC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAGCTGGGAGCAGAACTaGGGATGTCGCAGAGGACGA | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNSWEQN*GCRRGR Trigger: TCGTCCTCTGCGACATCCCCAGTTCTGCTCCCAGCT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTCTCGTTGGCCTTCATaGCCAGCCCGTTGGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNSRWPS*PARWTV Trigger: CACTGTCCAACGGGCTGGCCATGAAGGCCAACGAGA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAAGCCCCTTGGGTTCTaGAAGGTCGCTGCAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNKPLGF*KVAAVF Trigger: GAAGACTGCAGCGACCTTTCAGAACCCAAGGGGCTT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGAACCCGGTGGCAGATaGTACACTCATTGGGATCCG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNEPGGR*YTHWDP Trigger: CGGATCCCAATGAGTGTATCATCTGCCACCGGGTTC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTGTGTCTGGGATGCTaGCCTCAGGACACTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVCLGC*PQDTLP Trigger: TGGAAGAGTGTCCTGAGGGCAGCATCCCAGACACAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGGGTGTGTCTGGGATaGTGCCCTCAGGACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNWVCLG*CPQDTL Trigger: AAGAGTGTCCTGAGGGCAGCATCCCAGACACACCCA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTTTCCAGAGCAGCGATaGTCGACATCTCGAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNFPEQR*STSRGA Trigger: TGCCCCTCGAGATGTCGAGCATCGCTGCTCTGGAAA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTGGGCTCAAAGAGCTaGGATGGCAGATCTCGCATC | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLGSKS*DGRSRI Trigger: GATGCGAGATCTGCCATCGCAGCTCTTTGAGCCCAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGGTTCCGTTCTCGCTaGTCGCCATTTTCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNWFRSR*SPFSPG Trigger: GCCTGGAGAAAATGGCGAGCAGCGAGAACGGAACCA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGATGGGAGCTCAGTGTaGTCAAGGGGTTGGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNDGSSV*SRGWQM Trigger: CATCTGCCAACCCCTTGACCACACTGAGCTCCCATC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGATGTCTCTGAGGCCTaGGCCGAATCTAAGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNDVSEA*AESKSP Trigger: GGGACTCTTAGATTCGGCCCAGGCCTCAGAGACATC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACATGCTGGACTCTGAGTaGAGGCATAGCCCGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNMLDSE*RHSPMD Trigger: GTCCATCGGGCTATGCCTCCACTCAGAGTCCAGCAT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTCCGTTCACTGGGGTaGGAGATAGACCATTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLRSLG*EIDHWR Trigger: TCGCCAATGGTCTATCTCCCACCCCAGTGAACGGAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGATTGGGGCCGAGGTTaGAACTGGGCTCAAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNDWGRG*NWAQRA Trigger: AGCTCTTTGAGCCCAGTTCCAACCTCGGCCCCAATC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTTAGCTGGGGTCGGCTaGGGTAGAAGTGGGTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLAGVG*GRSGLD Trigger: ATCTAACCCACTTCTACCTCAGCCGACCCCAGCTAA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACATCACTGCAGAGTTCTaGTTGGGGCCGAGGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNITAEF*LGPRLE Trigger: TTCCAACCTCGGCCCCAATCAGAACTCTGCAGTGAT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGTGGAATTCTTGGGTaGTGTTGGACGGGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNCGILG*CWTGTE Trigger: CTCTGTCCCCGTCCAACAGCACCCAAGAATTCCACA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTTCTCTCGTGGATCTaGAGGGCACTCGAAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVLSWI*RALEEE Trigger: CTCTTCTTCGAGTGCCCTGCAGATCCACGAGAGAAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTCGCTGCAGTCTTCTTaGTCTGCTTTATTCGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNSLQSS*SALFAA Trigger: CGCGGCGAATAAAGCAGACCAAGAAGACTGCAGCGA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGGGAGGCACCAGCATTaGAAGCCACTTTTTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNGRHQH*KPLFLR Trigger: CCTCAGAAAAAGTGGCTTCCAATGCTGGTGCCTCCC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTTTTGACTGAGCCTTaGGGACTGGCAGCAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLLTEP*GLAAEW Trigger: CCATTCTGCTGCCAGTCCCCAAGGCTCAGTCAAAAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACACCACCGTCAGCCACTaGGGAGTTCAGAGTACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNTTVSH*GVQSTV Trigger: AACAGTACTCTGAACTCCCCAGTGGCTGACGGTGGT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTGCTGTTCCACATATaGGTGCCCATGTGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVLFHI*VPMWTF Trigger: GAAGGTCCACATGGGCACCCATATGTGGAACAGCAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTCCTAGAAATGTCATaGGGCCATCCACTGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLLEMS*GHPLRA Trigger: GGCTCTCAGTGGATGGCCCCATGACATTTCTAGGAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTCATGGCCAGCCCGTTaGACAGTGCTGCTGTATACT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNSWPAR*TVLLYT Trigger: AGTATACAGCAGCACTGTCCAACGGGCTGGCCATGA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTCGGATTGGAAATGTTaGGGCTTCGCTTGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNSDWKC*GFACFL Trigger: GAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACATGTGCATACGAATATaGTGCTGGAGGACCACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNMCIRI*CWRTTA Trigger: CGCAGTGGTCCTCCAGCAGCATATTCGTATGCACAT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACATCTGGCCTCCCATGTaGATACGAATATGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNIWPPM*IRICCW Trigger: CCAGCAGCATATTCGTATGCACATGGGAGGCCAGAT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTGGCTTTTCCTCCATaGCGGGTGACTTGTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVAFPP*RVTCGI Trigger: AATTCCACAAGTCACCCGGCATGGAGGAAAAGCCAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCACTGGGTTCCGAATTaGCCAGTTTTTCCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNHWVPN*PVFPRS Trigger: GGAACGTGGAAAAACTGGGCAATTCGGAACCCAGTG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAGGGAAGGCTTTTGCTaGGGAGGCTGGACTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNREGFC*GGWTFI Trigger: AATGAAAGTCCAGCCTCCCCAGCAAAAGCCTTCCCT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTGATGTTGGCAGATTaGCTAGCAAGGCTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLMLAD*LARLCA Trigger: AGCACAGAGCCTTGCTAGCCAATCTGCCAACATCAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTCACTATGCTCATGTTaGGAGAAGTGCCACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNSLCSC*EKCHHW Trigger: CCAGTGGTGGCACTTCTCCCAACATGAGCATAGTGA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAATAGGGATGGGGGCTaGCTCTTCCGTCTTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNNRDGG*LFRLDE Trigger: TTCATCAAGACGGAAGAGCCAGCCCCCATCCCTATT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTCAAAGAGCTGCGATaGCAGATCTCGCATCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLKELR*QISHLM Trigger: CATCAGATGCGAGATCTGCCATCGCAGCTCTTTGAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTACAATAGTGCTGTTTaGGAGTTCTCCGGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNYNSAV*EFSGAE Trigger: CTCTGCCCCGGAGAACTCCCAAACAGCACTATTGTA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGCAGTCTTCTTGGTCTaGTTTATTCGCCGCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNAVFLV*FIRRVF Trigger: AAAGACGCGGCGAATAAAGCAGACCAAGAAGACTGC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGTTCCACATATGGGTaGCCATGTGGACCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNCSTYG*PCGPSD Trigger: ATCTGAAGGTCCACATGGGCACCCATATGTGGAACA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTGTGGTCAAGGGGTTaGCAGATGTTCGTAAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVWSRG*QMFVKY Trigger: GTACTTTACGAACATCTGCCAACCCCTTGACCACAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACACATTTCTGGGAACTTaGCAGGATTGCCTCCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNTFLGT*QDCLLE Trigger: TTCTAGGAGGCAATCCTGTCAAGTTCCCAGAAATGT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACATCTTCTGCGGTTGTTaGAATGTTAGGCAAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNIFCGC*NVRQRG Trigger: ACCCCTTTGCCTAACATTGCAACAACCGCAGAAGAT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCTTCTGGAACATTTCTaGGAACTTGACAGGATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLLEHF*ELDRIA Trigger: GGCAATCCTGTCAAGTTCCCAGAAATGTTCCAGAAG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAAAGAACGCCTCGTCTaGAGTACTTTTCGCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNKERLV*STFRFK Trigger: TTTGAAGCGAAAAGTACTTCAGACGAGGCGTTCTTT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGGAGTTCAAATCTTCTaGGGTTGTTGCAATGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNGVQIF*GCCNVR Trigger: CCTAACATTGCAACAACCGCAGAAGATTTGAACTCC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGCCTTTTGTTGTGAATaGTCTTCCACAGATAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNAFCCE*SSTDSA Trigger: TGCACTATCTGTGGAAGAGCATTCACAACAAAAGGC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACACTCATTGGGATCCGTaGCCTTCTTGTCAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNTHWDP*PSCQCF Trigger: AAAACATTGACAAGAAGGCCACGGATCCCAATGAGT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTGCAGCTCTTTTTATaGAGCAGAAGGTCTGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVQLFL*SRRSDN Trigger: ATTATCAGACCTTCTGCTCCATAAAAAGAGCTGCAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTTTGATGATTTTCTCTaGATGACTAGAAGTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNFDDFL*MTRSQV Trigger: GACTTGACTTCTAGTCATGCAGAGAAAATCATCAAA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS GCA 90 bp | ACGGGGTGGGCACTGCAGCCGTCACTATGCTCATGTTGGGAGAAGTaGCACCACTGGGCGGGACGATGGAGGTGCCGGAGCTGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGWALQPSLCSCWEK*HHWAGRWRCRSCSE Trigger: CTCAGAGCAGCTCCGGCACCTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCAACATGAGCATAGTGACGGCTGCAGTGCCCACCCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS GCA 90 bp | TGCTCATGTTGGGAGAAGTGCCACCACTGGGCGGGACGATGGAGGTaGCGGAGCTGCTCTGAGGTAGCTGGACGTGGGGGAGCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSCWEKCHHWAGRWR*RSCSEVAGRGGAAS Trigger: TGAAGCAGCTCCCCCACGTCCAGCTACCTCAGAGCAGCTCCGGCACCTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCAACATGAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS CCA 90 bp | TCACTATGCTCATGTTGGGAGAAGTGCCACCACTGGGCGGGACGATaGAGGTGCCGGAGCTGCTCTGAGGTAGCTGGACGTGGGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLCSCWEKCHHWAGR*RCRSCSEVAGRGGA Trigger: AGCTCCCCCACGTCCAGCTACCTCAGAGCAGCTCCGGCACCTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCAACATGAGCATAGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS CCA 90 bp | GCACTGCAGCCGTCACTATGCTCATGTTGGGAGAAGTGCCACCACTaGGCGGGACGATGGAGGTGCCGGAGCTGCTCTGAGGTAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALQPSLCSCWEKCHH*AGRWRCRSCSEVAG Trigger: TCCAGCTACCTCAGAGCAGCTCCGGCACCTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCAACATGAGCATAGTGACGGCTGCAGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS GCA 90 bp | TCCCTCCTGGACCACCGTCAGCCACTGGGGAGTTCAGAGTACTGTTaGCCGCTGTCGGGACGGCGGAGCTTGCCATGTTACTCTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLDHRQPLGSSEYC*PLSGRRSLPCYSLH Trigger: GTGAAGAGAGTAACATGGCAAGCTCCGCCGTCCCGACAGCGGGCAACAGTACTCTGAACTCCCCAGTGGCTGACGGTGGTCCAGGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS CCA 90 bp | AGCTGGACGTGGGGGAGCTGCTTCACACCGCTGATGTTGGCAGATTaGCTAGCAAGGCTCTGTGCTAATCCAGCTGCCACCGCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWTWGSCFTPLMLAD*LARLCANPAATASC Trigger: ACAGCTGGCGGTGGCAGCTGGATTAGCACAGAGCCTTGCTAGCCAATCTGCCAACATCAGCGGTGTGAAGCAGCTCCCCCACGTCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS CCA 90 bp | CGTTCTCGCTGCTCGCCATTTTCTCCAGGCCAGCCAGAGGAGCACTaGGTTCCGAATTGCCCAGTTTTTCCACGTTCCCAGTCAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSRCSPFSPGQPEEH*VPNCPVFPRSQSAH Trigger: GTGGGCTGACTGGGAACGTGGAAAAACTGGGCAATTCGGAACCCAGTGCTCCTCTGGCTGGCCTGGAGAAAATGGCGAGCAGCGAGAACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGCCACCGCCAGCTGTaGAGACAGATGGGAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNCHRQL*RQMGAQ Trigger: CTGAGCTCCCATCTGTCTCAACAGCTGGCGGTGGCA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTGGGCAGGACTGGCTaGGTGTCTAGCCAGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVGRTG*VSSQLV Trigger: TACCAGCTGGCTAGACACCAAGCCAGTCCTGCCCAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGAAGCGTCCGCTGACTaGGGTGTGTCTGGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNEASAD*GVSGML Trigger: CAGCATCCCAGACACACCCAAGTCAGCGGACGCTTC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGCTGGCTCTTCCGTCTaGATGAAGGGCGTGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNAGSSV*MKGVRL Trigger: AAGCCTCACGCCCTTCATCAAGACGGAAGAGCCAGC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCGGGTGAAACGGAAGTaGGTTCCGTTCTCGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNRVKRK*VPFSLL Trigger: GAGCAGCGAGAACGGAACCAACTTCCGTTTCACCCG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCACTTCGGGGTCGGATaGGAAATGTTGAGGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNHFGVG*EMLRLR Trigger: GCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTTGATCACCGAGAAGTaGCCCAGTGTCGTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNLITEK*PSVVRS Trigger: GGACCTGACGACACTGGGCAACTTCTCGGTGATCAA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGCTGATGTTGGCAGATaGGCTAGCAAGGCTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNADVGR*ASKALC Trigger: GCACAGAGCCTTGCTAGCCAATCTGCCAACATCAGC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGGGGGTACTTCTCTTaGTGGCGCTGGAAGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNWGYFS*WRWKWT Trigger: AGTCCACTTCCAGCGCCACAAAGAGAAGTACCCCCA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCCTCAGGGACGCCACTaGGGTTTCTTGTGGCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNPQGRH*GFLWPN Trigger: ATTTGGCCACAAGAAACCCAAGTGGCGTCCCTGAGG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACACTGAGGAAGAGTCGTaGGTCAGCACATCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNTEEES*VSTSPS Trigger: GGAAGGGGATGTGCTGACCAACGACTCTTCCTCAGT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTTCACACCGCTGATGTaGGCAGATTGGCTAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNFTPLM*ADWLAR Trigger: CCTTGCTAGCCAATCTGCCAACATCAGCGGTGTGAA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTGGGAGGCACCAGCATaGGAAGCCACTTTTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNWEAPA*EATFSE Trigger: CTCAGAAAAAGTGGCTTCCAATGCTGGTGCCTCCCA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGTCGGATTGGAAATGTaGAGGCTTCGCTTGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNVGLEM*RLRLLP Trigger: AGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGAC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTCAACAGACTGCTTATaGCGAATGCTGGTGAGGACG | + |
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Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNSTDCL*RMLVRT Trigger: CGTCCTCACCAGCATTCGCAATAAGCAGTCTGTTGA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACCAGATGATACACTCATaGGGATCCGTGGCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNQMIHS*GSVAFL Trigger: CAAGAAGGCCACGGATCCCAATGAGTGTATCATCTG...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAGTGTGGTCAAGGGGTaGGCAGATGTTCGTAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNSVVKG*ADVRKV Trigger: TACTTTACGAACATCTGCCAACCCCTTGACCACACT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACGGGAACTTGACAGGATaGCCTCCTAGAAATGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNGNLTG*PPRNVM Trigger: CATGACATTTCTAGGAGGCAATCCTGTCAAGTTCCC...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTTCTCAATGATGACGTaGCTGTTGATCACCGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNFSMMT*LLITEK Trigger: CTTCTCGGTGATCAACAGCAACGTCATCATTGAGAA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACACGTGTACAAAGCCGTaGACCTCTGTTTTGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNTCTKP*TSVLMR Trigger: TCTCATCAAAACAGAGGTCAACGGCTTTGTACACGT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACAACATTTCTGGGAACTaGACAGGATTGCCTCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNNISGN*TGLPPR Trigger: TCTAGGAGGCAATCCTGTCAAGTTCCCAGAAATGTT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACATGTGGACCTTCAGATaGCCTTTTGTTGTGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNMWTFR*PFVVNA Trigger: AGCATTCACAACAAAAGGCAATCTGAAGGTCCACAT...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTACTGTGAATATACCCTACAAGGCCAAAATGCTACGTCTCAGTTTCAACTTCTCATCTGAGAAGTaGTCTAAGTCGTCGAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: FSTVNIPYKAKMLRLSFNFSSEK*SKSSKF Trigger: AAATTTCGACGACTTAGACAACTTCTCAGATGAGAA...GTTGAAACTGAGACGTAGCATTTTGGCCTTGTAGGGTATATTCACAGTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | TGCCACCACTCCCGCCGCTGCCGCCAGTGGTGGTGGTaGTGGTGGTGGCAACTGGGACCTCCACCTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: CHHSRRCRQWWW*WWWQLGPPPPW Trigger: CCATGGAGGTGGAGGTCCCAGTTGCCACCACCACCACCACCACCACTGGCGGCAGCGGCGGGAGTGGTGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | TGCTGCCACCACTCCCGCCGCTGCCGCCAGTGGTGGTaGTGGTGGTGGTGGCAACTGGGACCTCCACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CCHHSRRCRQWW*WWWWQLGPPPP Trigger: TGGAGGTGGAGGTCCCAGTTGCCACCACCACCACCACCACCACTGGCGGCAGCGGCGGGAGTGGTGGCAGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | GAGTGCTGCCACCACTCCCGCCGCTGCCGCCAGTGGTaGTGGTGGTGGTGGTGGCAACTGGGACCTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ECCHHSRRCRQW*WWWWWQLGPPP Trigger: AGGTGGAGGTCCCAGTTGCCACCACCACCACCACCACCACTGGCGGCAGCGGCGGGAGTGGTGGCAGCACTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS TCA 72 bp | CCACTGGGCGGGACGATGGAGGTGCCGGAGCTGCTCTaGGGTAGCTGGACGTGGGGGAGCTGCTTCACACCG | + |
|
Preference number: 6 (lower is better) Translates to: PLGGTMEVPELL*GSWTWGSCFTP Trigger: CGGTGTGAAGCAGCTCCCCCACGTCCAGCTACCTCAGAGCAGCTCCGGCACCTCCATCGTCCCGCCCAGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | TCAGAGTGCTGCCACCACTCCCGCCGCTGCCGCCAGTaGTGGTGGTGGTGGTGGTGGCAACTGGGACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SECCHHSRRCRQ*WWWWWWQLGPP Trigger: TGGAGGTCCCAGTTGCCACCACCACCACCACCACCACTGGCGGCAGCGGCGGGAGTGGTGGCAGCACTCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS GCA 72 bp | TGCCACCACTGGGCGGGACGATGGAGGTGCCGGAGCTaGTCTGAGGTAGCTGGACGTGGGGGAGCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CHHWAGRWRCRS*SEVAGRGGAAS Trigger: TGAAGCAGCTCCCCCACGTCCAGCTACCTCAGAGCAGCTCCGGCACCTCCATCGTCCCGCCCAGTGGTGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS GCA 72 bp | TGGGAGAAGTGCCACCACTGGGCGGGACGATGGAGGTaGCGGAGCTGCTCTGAGGTAGCTGGACGTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: WEKCHHWAGRWR*RSCSEVAGRGG Trigger: TCCCCCACGTCCAGCTACCTCAGAGCAGCTCCGGCACCTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS GCA 72 bp | CATCCACTGAGAGCCGCCGGCCCCGGCGTGCAGGGGTaGTGTTCCACATATGGGTGCCCATGTGGACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HPLRAAGPGVQG*CSTYGCPCGPS Trigger: TGAAGGTCCACATGGGCACCCATATGTGGAACAGCACCCCTGCACGCCGGGGCCGGCGGCTCTCAGTGGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS GCA 72 bp | GCACTGCAGCCGTCACTATGCTCATGTTGGGAGAAGTaGCACCACTGGGCGGGACGATGGAGGTGCCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALQPSLCSCWEK*HHWAGRWRCRS Trigger: GCTCCGGCACCTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCAACATGAGCATAGTGACGGCTGCAGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | ACGGGGTGGGCACTGCAGCCGTCACTATGCTCATGTTaGGAGAAGTGCCACCACTGGGCGGGACGATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TGWALQPSLCSC*EKCHHWAGRWR Trigger: CCTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCAACATGAGCATAGTGACGGCTGCAGTGCCCACCCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | GGTGAAGGTGGTCCCTCCTGGACCACCGTCAGCCACTaGGGAGTTCAGAGTACTGTTGCCCGCTGTCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GEGGPSWTTVSH*GVQSTVARCRD Trigger: GTCCCGACAGCGGGCAACAGTACTCTGAACTCCCCAGTGGCTGACGGTGGTCCAGGAGGGACCACCTTCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CAA 72 bp | GACGGGGTGGGCACTGCAGCCGTCACTATGCTCATGTaGGGAGAAGTGCCACCACTGGGCGGGACGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DGVGTAAVTMLM*GEVPPLGGTME Trigger: CTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCAACATGAGCATAGTGACGGCTGCAGTGCCCACCCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | GTTGTGATCGCTGAGGTACCCGTGGAAGAGCCGCTGTaGCAGCTCGGGGTGGTGATGTTGGTGACACCGCTC | + |
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Preference number: 6 (lower is better) Translates to: VVIAEVPVEEPL*QLGVVMLVTPL Trigger: GAGCGGTGTCACCAACATCACCACCCCGAGCTGCCACAGCGGCTCTTCCACGGGTACCTCAGCGATCACAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | TCATGTTGGGAGAAGTGCCACCACTGGGCGGGACGATaGAGGTGCCGGAGCTGCTCTGAGGTAGCTGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: SCWEKCHHWAGR*RCRSCSEVAGR Trigger: ACGTCCAGCTACCTCAGAGCAGCTCCGGCACCTCCATCGTCCCGCCCAGTGGTGGCACTTCTCCCAACATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CAA 72 bp | ATCTCGCCGGGGGAGCGAGGCCACTTCGGGGTCGGATaGGAAATGTTGAGGCTTCGCTTGCTTCCTCCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ISPGERGHFGVG*EMLRLRLLPPR Trigger: TCGCGGAGGAAGCAAGCGAAGCCTCAACATTTCCAATCCGACCCCGAAGTGGCCTCGCTCCCCCGGCGAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CAA 90 bp | GTCCCTCCTGGACCACCGTCAGCCACTGGGGAGTTCAGAGTACTGTaGCCCGCTGTCGGGACGGCGGAGCTTGCCATGTTACTCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VPPGPPSATGEFRVL*PAVGTAELAMLLSS Trigger: TGAAGAGAGTAACATGGCAAGCTCCGCCGTCCCGACAGCGGGCAACAGTACTCTGAACTCCCCAGTGGCTGACGGTGGTCCAGGAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | TTGGGAGAGTTGGAGGCAATGGTAGGCCGACGGAAGTaGTCAGAGTGGGCAGGACTGGCTTGGTGTCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGELEAMVGRRK*SEWAGLAWCLA Trigger: GGCTAGACACCAAGCCAGTCCTGCCCACTCTGACCACTTCCGTCGGCCTACCATTGCCTCCAACTCTCCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | AAGCACCTCCGTTCACTGGGGTGGGAGATAGACCATTaGCGAACTCGCCTGGCCCCACTCGCTGTGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KHLRSLGWEIDH*RTRLAPLAVAF Trigger: AAAAGCCACAGCGAGTGGGGCCAGGCGAGTTCGCCAATGGTCTATCTCCCACCCCAGTGAACGGAGGTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CAA 72 bp | GGGACGGCGGAGCTTGCCATGTTACTCTCTTCACCCTaGCCACCAAAGGGTGGCACAGCAGACCCTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GTAELAMLLSSP*PPKGGTADPST Trigger: AGTGGAAGGGTCTGCTGTGCCACCCTTTGGTGGCAAGGGTGAAGAGAGTAACATGGCAAGCTCCGCCGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CAA 72 bp | AAAGCACCTCCGTTCACTGGGGTGGGAGATAGACCATaGGCGAACTCGCCTGGCCCCACTCGCTGTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KAPPFTGVGDRP*ANSPGPTRCGF Trigger: AAAGCCACAGCGAGTGGGGCCAGGCGAGTTCGCCAATGGTCTATCTCCCACCCCAGTGAACGGAGGTGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS GCA 72 bp | GGACGGCGGAGCTTGCCATGTTACTCTCTTCACCCTTaGCACCAAAGGGTGGCACAGCAGACCCTTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: GRRSLPCYSLHP*HQRVAQQTLPL Trigger: AAGTGGAAGGGTCTGCTGTGCCACCCTTTGGTGGCAAGGGTGAAGAGAGTAACATGGCAAGCTCCGCCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | TGGGGGAGCTGCTTCACACCGCTGATGTTGGCAGATTaGCTAGCAAGGCTCTGTGCTAATCCAGCTGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: WGSCFTPLMLAD*LARLCANPAAT Trigger: GGTGGCAGCTGGATTAGCACAGAGCCTTGCTAGCCAATCTGCCAACATCAGCGGTGTGAAGCAGCTCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | TGCCATGTTACTCTCTTCACCCTTGCCACCAAAGGGTaGCACAGCAGACCCTTCCACTTCCTCAGGGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: CHVTLFTLATKG*HSRPFHFLRDA Trigger: GGCGTCCCTGAGGAAGTGGAAGGGTCTGCTGTGCCACCCTTTGGTGGCAAGGGTGAAGAGAGTAACATGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS TCA 72 bp | TATTCGCCGCGTCTTTCATTTGGTCGTCGGGATCATTaGGAGACGGGCCAGGAGGGAAGGCTTTTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: YSPRLSFGRRDH*ETGQEGRLLLG Trigger: CCCCAGCAAAAGCCTTCCCTCCTGGCCCGTCTCTCAATGATCCCGACGACCAAATGAAAGACGCGGCGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS CCA 72 bp | TGCTCGCCATTTTCTCCAGGCCAGCCAGAGGAGCACTaGGTTCCGAATTGCCCAGTTTTTCCACGTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CSPFSPGQPEEH*VPNCPVFPRSQ Trigger: CTGGGAACGTGGAAAAACTGGGCAATTCGGAACCCAGTGCTCCTCTGGCTGGCCTGGAGAAAATGGCGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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| CDS GCA 72 bp | GGGAAGCGTCCGCTGACTTGGGTGTGTCTGGGATGCTaGCCTCAGGACACTCTTCCATATTCTCATCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GKRPLTWVCLGC*PQDTLPYSHLR Trigger: TCTCAGATGAGAATATGGAAGAGTGTCCTGAGGGCAGCATCCCAGACACACCCAAGTCAGCGGACGCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034090.8 |
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