Pregenerated sensors for SAFB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071054Ensembl transcript IDs: ENSMUST00000095224.11, ENSMUST00000182533.8, ENSMUST00000182800.8, ENSMUST00000182951.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TCAGGCACTCTTTTGCCAGTGGGCTCACTTTTCCACTaGGATCATCTTGCCATGCAGCTCAGTCTTGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: SGTLLPVGSLFH*DHLAMQLSLVQ Trigger: TTGCACAAGACTGAGCTGCATGGCAAGATGATCTCAGTGGAAAAGTGAGCCCACTGGCAAAAGAGTGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| 3UTR GCA 72 bp | CAGCTCAGTCTTGTGCAAATGGCTAATGCATTTTGTTaGCTCTTCAGCTGTGGACATAGTGACAAAGCCATA | + |
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Preference number: 3 (lower is better) Translates to: QLSLVQMANAFC*LFSCGHSDKAI Trigger: TATGGCTTTGTCACTATGTCCACAGCTGAAGAGGCAACAAAATGCATTAGCCATTTGCACAAGACTGAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR GCA 90 bp | TGCTGGCCTTCTCCTTCTTGCTGTCCCCATCTCGCCTGTCAGGCACTCTTTTGCGTCTCCACATCCTCCTaGCCATCCCCAGAATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: CWPSPSCCPHLACQALFCVSTSS*PSPEFS Trigger: GGAGAATTCTGGGGATGGGCAGGAGGATGTGGAGAC...GCAAAAGAGTGCCTGACAGGCGAGATGGGGACAGCAAGAAGGAGAAGGCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGGACATAGTGACAAAGCCATAACAGCGAGCTCCAGGACTCCGGGCGTTCACACCCTCGTCTTCTaGTTTCCTCCCTTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SCGHSDKAITASSRTPGVHTLVF*FPPFAG Trigger: CCCAGCAAAGGGAGGAAACCAGAAGACGAGGGTGTG...AACGCCCGGAGTCCTGGAGCTCGCTGTTATGGCTTTGTCACTATGTCCACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| 3UTR CAA 72 bp | TTTGCAGATCTGTCACTGGTGCTGGCCTTCTCCTTCTaGCTGTCCCCATCTCGCCTGTCAGGCACTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: FADLSLVLAFSF*LSPSRLSGTLL Trigger: CAAAAGAGTGCCTGACAGGCGAGATGGGGACAGCAAGAAGGAGAAGGCCAGCACCAGTGACAGATCTGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR TCA 90 bp | TGCTGGCCTTCTCCTTCTTGCTGTCCCCATCTCGCCTGTCAGGCACTCTTTTGCCCTCATCCAGCACACTaGTGTCCATCATATCCATGT | + |
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Preference number: 4 (lower is better) Translates to: CWPSPSCCPHLACQALFCPHPAH*CPSYPC Trigger: ACATGGATATGATGGACATCAGTGTGCTGGATGAGG...GCAAAAGAGTGCCTGACAGGCGAGATGGGGACAGCAAGAAGGAGAAGGCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGGACATAGTGACAAAGCCATAACAGCGAGCTCCAGGACTCCGGGCGTTAACTGGCTCCAAAGATaGCTCTTCCATCTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SCGHSDKAITASSRTPGVNWLQR*LFHLLQ Trigger: CTGCAGGAGATGGAAGAGGCATCTTTGGAGCCAGTT...AACGCCCGGAGTCCTGGAGCTCGCTGTTATGGCTTTGTCACTATGTCCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR CCA 90 bp | GTCTTGTGCAAATGGCTAATGCATTTTGTTGCCTCTTCAGCTGTGGACATAGTGGGCCCTCAGGGAGTGTaGCCTCCTCCTCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLCKWLMHFVASSAVDIVGPQGV*PPPLPP Trigger: TGGAGGAAGAGGAGGAGGCCACACTCCCTGAGGGCC...CACTATGTCCACAGCTGAAGAGGCAACAAAATGCATTAGCCATTTGCACAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR CCA 90 bp | TGTTGCCTCTTCAGCTGTGGACATAGTGACAAAGCCATAACAGCGAGCTCCAGGCTCCTGCAGCTGTTCTaGGAGCCCTTTCAAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: CCLFSCGHSDKAITASSRLLQLF*EPFQIS Trigger: GGAGATTTGAAAGGGCTCCCAGAACAGCTGCAGGAG...CCTGGAGCTCGCTGTTATGGCTTTGTCACTATGTCCACAGCTGAAGAGGCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR GCA 90 bp | GTCTTGTGCAAATGGCTAATGCATTTTGTTGCCTCTTCAGCTGTGGACATAGTGTCCTACCACAGCTGCTaGGACCCTTCTCTTCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: VLCKWLMHFVASSAVDIVSYHSC*DPSLLG Trigger: CCCGAGAAGAGAAGGGTCGCAGCAGCTGTGGTAGGA...CACTATGTCCACAGCTGAAGAGGCAACAAAATGCATTAGCCATTTGCACAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR GCA 90 bp | CAAATGGCTAATGCATTTTGTTGCCTCTTCAGCTGTGGACATAGTGACAAAGCCTCTATAGCATGCTCCTaGAGCTGTTCTGGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QMANAFCCLFSCGHSDKASIACS*SCSGSP Trigger: AGGGCTCCCAGAACAGCTGCAGGAGCATGCTATAGA...GGCTTTGTCACTATGTCCACAGCTGAAGAGGCAACAAAATGCATTAGCCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR CCA 90 bp | TCAGTCTTGTGCAAATGGCTAATGCATTTTGTTGCCTCTTCAGCTGTGGACATACCTCCTCCACAGAACTaGCTCCAAAGATGCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SVLCKWLMHFVASSAVDIPPPQN*LQRCLF Trigger: GAAGAGGCATCTTTGGAGCCAGTTCTGTGGAGGAGG...TATGTCCACAGCTGAAGAGGCAACAAAATGCATTAGCCATTTGCACAAGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR TCA 90 bp | AATGCATTTTGTTGCCTCTTCAGCTGTGGACATAGTGACAAAGCCATAACAGCGTCTCCTGCAGCATGGTaGAGTCAGATGATGACGTAT | + |
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Preference number: 4 (lower is better) Translates to: NAFCCLFSCGHSDKAITASPAAW*SQMMTY Trigger: ATACGTCATCATCTGACTTCACCATGCTGCAGGAGA...CGCTGTTATGGCTTTGTCACTATGTCCACAGCTGAAGAGGCAACAAAATGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR GCA 90 bp | CAAATGGCTAATGCATTTTGTTGCCTCTTCAGCTGTGGACATAGTGACAAAGCCTTGTCATCTATAGCATaGTCCTGCAGCTGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QMANAFCCLFSCGHSDKALSSIA*SCSCSG Trigger: CCCAGAACAGCTGCAGGAGCATGCTATAGATGACAA...GGCTTTGTCACTATGTCCACAGCTGAAGAGGCAACAAAATGCATTAGCCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR GCA 90 bp | TCAGTCTTGTGCAAATGGCTAATGCATTTTGTTGCCTCTTCAGCTGTGGACATAATCATATCCATGTCTTaGAGGTTCTCCAGGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SVLCKWLMHFVASSAVDIIISMS*RFSRLV Trigger: GACCAGCCTGGAGAACCTGCAAGACATGGATATGAT...TATGTCCACAGCTGAAGAGGCAACAAAATGCATTAGCCATTTGCACAAGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS GCA 90 bp | CTGGCCAATAGGCATCATCTCGCCGGCCATCCACTTCATAGGGCCTaGGCACAGCAGGCCGGCGCTCCTGTTCATAGCGCAGCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LANRHHLAGHPLHRA*AQQAGAPVHSAAPA Trigger: AGCAGGAGCTGCGCTATGAACAGGAGCGCCGGCCTGCTGTGCGCAGGCCCTATGAAGTGGATGGCCGGCGAGATGATGCCTATTGGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS GCA 90 bp | AGCGCAGCTCCTGCTGACGCCGAAGCTCCTCTCGCTCTCGGTGAATaGGCTCTTGCTCACGCCTCCGCTCCTGTTCTACATGCATCCGCT | + |
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Preference number: 5 (lower is better) Translates to: SAAPADAEAPLALGE*ALAHASAPVLHASA Trigger: AGCGGATGCATGTAGAACAGGAGCGGAGGCGTGAGCAAGAGCGCATTCACCGAGAGCGAGAGGAGCTTCGGCGTCAGCAGGAGCTGCGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CCA 90 bp | CTCTGTCCTCCAAAGCCTGCCTGCATCCCTCCACGTGGGATCACATaGCCACGAGAAGCTCCTCCTGGGGCAAAACTGCCTCGCCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: LCPPKPACIPPRGIT*PREAPPGAKLPRPD Trigger: GTCAGGGCGAGGCAGTTTTGCCCCAGGAGGAGCTTCTCGTGGCCATGTGATCCCACGTGGAGGGATGCAGGCAGGCTTTGGAGGACAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CCA 90 bp | ACTTGTCCATCACCACAGTGCGCTCAGTGCCACGGCTTCCTGACTTaGTCGTTCGCGAGCGCTCTGAAGGCCCAGGTTTCTGGTCATCTG | + |
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Preference number: 5 (lower is better) Translates to: TCPSPQCAQCHGFLT*SFASALKAQVSGHL Trigger: CAGATGACCAGAAACCTGGGCCTTCAGAGCGCTCGCGAACGACCAAGTCAGGAAGCCGTGGCACTGAGCGCACTGTGGTGATGGACAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS GCA 90 bp | ATATCCATGTCTTGCAGGTTCTCCAGGCTGGTCTCCACATCCTCCTaGCCATCCCCAGAATTCTCCTCGAGCCCGTTGTCCTCCACACCC | + |
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Preference number: 5 (lower is better) Translates to: ISMSCRFSRLVSTSS*PSPEFSSSPLSSTP Trigger: GGGTGTGGAGGACAACGGGCTCGAGGAGAATTCTGGGGATGGGCAGGAGGATGTGGAGACCAGCCTGGAGAACCTGCAAGACATGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS-3UTR CAA 90 bp | TTCAGCTGTGGACATAGTGACAAAGCCATAACAGCGAGCTCCAGGACTCCGGGCTTCTCCTCGAGCCCGTaGTCCTCCACACCCTCGTCT | + |
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Preference number: 5 (lower is better) Translates to: FSCGHSDKAITASSRTPGFSSSP*SSTPSS Trigger: AGACGAGGGTGTGGAGGACAACGGGCTCGAGGAGAA...GCCCGGAGTCCTGGAGCTCGCTGTTATGGCTTTGTCACTATGTCCACAGCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS TCA 90 bp | CAGCCTCTGCTCCCGCTCACTGCGCTCCCGTTCCCTCCGAGACTCTaGGTCTCTGGACTTTCGAGACTCTTTAACTTTGTCAAAGGACAC | + |
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Preference number: 5 (lower is better) Translates to: QPLLPLTALPFPPRL*VSGLSRLFNFVKGH Trigger: GTGTCCTTTGACAAAGTTAAAGAGTCTCGAAAGTCCAGAGACTCAGAGTCTCGGAGGGAACGGGAGCGCAGTGAGCGGGAGCAGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CCA 90 bp | CTTCCTGACTTGGTCGTTCGCGAGCGCTCTGAAGGCCCAGGTTTCTaGTCATCTGCGTCTTTGCTCTTCTCTGTGCTCCCATCATCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LPDLVVRERSEGPGF*SSASLLFSVLPSSV Trigger: GACAGATGATGGGAGCACAGAGAAGAGCAAAGACGCAGATGACCAGAAACCTGGGCCTTCAGAGCGCTCGCGAACGACCAAGTCAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS-3UTR CAA 90 bp | TTCAGCTGTGGACATAGTGACAAAGCCATAACAGCGAGCTCCAGGACTCCGGGCTCTGCCACGCTGCCATaGTCAATGTCAGCCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: FSCGHSDKAITASSRTPGSATLP*SMSASS Trigger: GGATGAGGCTGACATTGACAATGGCAGCGTGGCAGA...GCCCGGAGTCCTGGAGCTCGCTGTTATGGCTTTGTCACTATGTCCACAGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS-3UTR CAA 90 bp | CGGGCGTTCGTCACAACCTTAGCACCCACCACCTTCCCATATCTGCTAAACAGGCTCGGGAAAGCCTTTTaGTATCCGAGTCCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RAFVTTLAPTTFPYLLNRLGKAF*YPSPPP Trigger: TGGAGGAGGACTCGGATACAAAAAGGCTTTCCCGAG...CCTGTTTAGCAGATATGGGAAGGTGGTGGGTGCTAAGGTTGTGACGAACGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS TCA 90 bp | AAGGACACAACAGACCGCTTCTCCCGGCTGGCTGACTTCCGGTCCTaGCTTTTGGAGGCTCTCTCTTTAGACCCAGATGTTTTCACACTG | + |
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Preference number: 5 (lower is better) Translates to: KDTTDRFSRLADFRS*LLEALSLDPDVFTL Trigger: CAGTGTGAAAACATCTGGGTCTAAAGAGAGAGCCTCCAAAAGTCAGGACCGGAAGTCAGCCAGCCGGGAGAAGCGGTCTGTTGTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS GCA 90 bp | TTCGCGAGCGCTCTGAAGGCCCAGGTTTCTGGTCATCTGCGTCTTTaGTCTTCTCTGTGCTCCCATCATCTGTCTTCTTGGCATCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: FASALKAQVSGHLRL*SSLCSHHLSSWHRL Trigger: AAGACGATGCCAAGAAGACAGATGATGGGAGCACAGAGAAGAGCAAAGACGCAGATGACCAGAAACCTGGGCCTTCAGAGCGCTCGCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS TCA 90 bp | AGTCTGCCACGCTGCCATTGTCAATGTCAGCCTCATCCAGCACACTaGTGTCCATCATATCCATGTCTTGCAGGTTCTCCAGGCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SLPRCHCQCQPHPAH*CPSYPCLAGSPGWS Trigger: AGACCAGCCTGGAGAACCTGCAAGACATGGATATGATGGACATCAGTGTGCTGGATGAGGCTGACATTGACAATGGCAGCGTGGCAGACT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS TCA 90 bp | GCGTTCAGGGTAATGCTGTCCTTCTCTGTCTCCCATCATCGACCGTaGACCTTCTCTCCTATCCACAGAATGGTTGGGATAACGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AFRVMLSFSVSHHRP*TFSPIHRMVGITAS Trigger: AGAGGCCGTTATCCCAACCATTCTGTGGATAGGAGAGAAGGTTCACGGTCGATGATGGGAGACAGAGAAGGACAGCATTACCCTGAACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS TCA 90 bp | TTTAACTTTGTCAAAGGACACAACAGACCGCTTCTCCCGGCTGGCTaGCTTCCGGTCCTGACTTTTGGAGGCTCTCTCTTTAGACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: FNFVKGHNRPLLPAG*LPVLTFGGSLFRPR Trigger: TCTGGGTCTAAAGAGAGAGCCTCCAAAAGTCAGGACCGGAAGTCAGCCAGCCGGGAGAAGCGGTCTGTTGTGTCCTTTGACAAAGTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS GCA 90 bp | GTCCTCCTCCACAGAACTGGCTCCAAAGATGCCTCTTCCATCTCCTaGAGCATGGTGAAGTCAGATGATGACGTATCTACATTGTTAACG | + |
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Preference number: 5 (lower is better) Translates to: VLLHRTGSKDASSIS*SMVKSDDDVSTLLT Trigger: CGTTAACAATGTAGATACGTCATCATCTGACTTCACCATGCTGCAGGAGATGGAAGAGGCATCTTTGGAGCCAGTTCTGTGGAGGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS GCA 90 bp | GATGACGTATCTACATTGTTAACGGTGTCCTTGTCATCTATAGCATaGTCCTGCAGCTGTTCTGGGAGCCCTTTCAAATCTCCTTCTACC | + |
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Preference number: 5 (lower is better) Translates to: DDVSTLLTVSLSSIA*SCSCSGSPFKSPST Trigger: GGTAGAAGGAGATTTGAAAGGGCTCCCAGAACAGCTGCAGGAGCATGCTATAGATGACAAGGACACCGTTAACAATGTAGATACGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS GCA 90 bp | GTATCTACATTGTTAACGGTGTCCTTGTCATCTATAGCATGCTCCTaGAGCTGTTCTGGGAGCCCTTTCAAATCTCCTTCTACCAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: VSTLLTVSLSSIACS*SCSGSPFKSPSTSS Trigger: TGAACTGGTAGAAGGAGATTTGAAAGGGCTCCCAGAACAGCTGCAGGAGCATGCTATAGATGACAAGGACACCGTTAACAATGTAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS-3UTR CAA 90 bp | TCAGTCTTGTGCAAATGGCTAATGCATTTTGTTGCCTCTTCAGCTGTGGACATACATCATATCCATGTCTaGCAGGTTCTCCAGGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SVLCKWLMHFVASSAVDIHHIHV*QVLQAG Trigger: ACCAGCCTGGAGAACCTGCAAGACATGGATATGATG...TATGTCCACAGCTGAAGAGGCAACAAAATGCATTAGCCATTTGCACAAGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS GCA 90 bp | AGTATTTTCTCATTTTCTGGCTCCAAAGATGCCTCTTCCATCTCCTaGAGCATGGTGAAGTCAGATGATGACGTATCTACATTGTTAACG | + |
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Preference number: 5 (lower is better) Translates to: SIFSFSGSKDASSIS*SMVKSDDDVSTLLT Trigger: CGTTAACAATGTAGATACGTCATCATCTGACTTCACCATGCTGCAGGAGATGGAAGAGGCATCTTTGGAGCCAGAAAATGAGAAAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CCA 72 bp | AGCCGCTCCCGCTCCATGCGTTCACGCTCTAGCCGATaGCGGTGGAATGCCAAGCGCTCACGAGCAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRSRSMRSRSSR*RWNAKRSRAIS Trigger: GGAGATTGCTCGTGAGCGCTTGGCATTCCACCGCCATCGGCTAGAGCGTGAACGCATGGAGCGGGAGCGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CCA 72 bp | GCTCTGTCCTCCAAAGCCTGCCTGCATCCCTCCACGTaGGATCACATGGCCACGAGAAGCTCCTCCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ALSSKACLHPST*DHMATRSSSWG Trigger: GCCCCAGGAGGAGCTTCTCGTGGCCATGTGATCCCACGTGGAGGGATGCAGGCAGGCTTTGGAGGACAGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS GCA 72 bp | GGTCTGCTTCCCCGGCTCTGTCCTCCAAAGCCTGCCTaGATCCCTCCACGTGGGATCACATGGCCACGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GLLPRLCPPKPA*IPPRGITWPRE Trigger: TTCTCGTGGCCATGTGATCCCACGTGGAGGGATGCAGGCAGGCTTTGGAGGACAGAGCCGGGGAAGCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CCA 72 bp | CCAAAGCCTGCCTGCATCCCTCCACGTGGGATCACATaGCCACGAGAAGCTCCTCCTGGGGCAAAACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PKPACIPPRGIT*PREAPPGAKLP Trigger: AGGCAGTTTTGCCCCAGGAGGAGCTTCTCGTGGCCATGTGATCCCACGTGGAGGGATGCAGGCAGGCTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CAA 72 bp | ACGCCGAAGCTCCTCTCGCTCTCGGTGAATGCGCTCTaGCTCACGCCTCCGCTCCTGTTCTACATGCATCCG | + |
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Preference number: 6 (lower is better) Translates to: TPKLLSLSVNAL*LTPPLLFYMHP Trigger: CGGATGCATGTAGAACAGGAGCGGAGGCGTGAGCAAGAGCGCATTCACCGAGAGCGAGAGGAGCTTCGGCGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS GCA 72 bp | TCTTGCAGGTTCTCCAGGCTGGTCTCCACATCCTCCTaGCCATCCCCAGAATTCTCCTCGAGCCCGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SCRFSRLVSTSS*PSPEFSSSPLS Trigger: GGACAACGGGCTCGAGGAGAATTCTGGGGATGGGCAGGAGGATGTGGAGACCAGCCTGGAGAACCTGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS CAA 90 bp | GACTTGTCCATCACCACAGTGCGCTCAGTGCCACGGCTTCCTGACTaGGTCGTTCGCGAGCGCTCTGAAGGCCCAGGTTTCTGGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: DLSITTVRSVPRLPD*VVRERSEGPGFWSS Trigger: AGATGACCAGAAACCTGGGCCTTCAGAGCGCTCGCGAACGACCAAGTCAGGAAGCCGTGGCACTGAGCGCACTGTGGTGATGGACAAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS TCA 72 bp | GTCGAAGTCGTGAAAGCGGTCCTGGCGGCTGAAGTCTaGGTGGTAACGGTCATCCAGAGCAGCCCGTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: VEVVKAVLAAEV*VVTVIQSSPFS Trigger: GCTAAACGGGCTGCTCTGGATGACCGTTACCACTCAGACTTCAGCCGCCAGGACCGCTTTCACGACTTCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS GCA 72 bp | CTGGGAGCCCTTTCAAATCTCCTTCTACCAGTTCAGTaGTGTCTGCTAGGCCCTCAGGGAGTGTGGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LGALSNLLLPVQ*CLLGPQGVWPP Trigger: AGGAGGCCACACTCCCTGAGGGCCTAGCAGACAGCACTGAACTGGTAGAAGGAGATTTGAAAGGGCTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS CCA 72 bp | TTGGTCGTTCGCGAGCGCTCTGAAGGCCCAGGTTTCTaGTCATCTGCGTCTTTGCTCTTCTCTGTGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LVVRERSEGPGF*SSASLLFSVLP Trigger: TGGGAGCACAGAGAAGAGCAAAGACGCAGATGACCAGAAACCTGGGCCTTCAGAGCGCTCGCGAACGACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CAA 90 bp | CTCTTAAGGTTTGCAGATCTGTCACTGGTGCTGGCCTTCTCCTTCTaGCTGTCCCCATCTCGCCTGTCAGGCACTCTTTTGCCAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLRFADLSLVLAFSF*LSPSRLSGTLLPVG Trigger: GCCCACTGGCAAAAGAGTGCCTGACAGGCGAGATGGGGACAGCAAGAAGGAGAAGGCCAGCACCAGTGACAGATCTGCAAACCTTAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS TCA 72 bp | ACAGACCGCTTCTCCCGGCTGGCTGACTTCCGGTCCTaGCTTTTGGAGGCTCTCTCTTTAGACCCAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: TDRFSRLADFRS*LLEALSLDPDV Trigger: AACATCTGGGTCTAAAGAGAGAGCCTCCAAAAGTCAGGACCGGAAGTCAGCCAGCCGGGAGAAGCGGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS TCA 72 bp | GTCAAAGGACACAACAGACCGCTTCTCCCGGCTGGCTaGCTTCCGGTCCTGACTTTTGGAGGCTCTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VKGHNRPLLPAG*LPVLTFGGSLF Trigger: AAAGAGAGAGCCTCCAAAAGTCAGGACCGGAAGTCAGCCAGCCGGGAGAAGCGGTCTGTTGTGTCCTTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS TCA 72 bp | CTCCCGCTCACTGCGCTCCCGTTCCCTCCGAGACTCTaGGTCTCTGGACTTTCGAGACTCTTTAACTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LPLTALPFPPRL*VSGLSRLFNFV Trigger: GACAAAGTTAAAGAGTCTCGAAAGTCCAGAGACTCAGAGTCTCGGAGGGAACGGGAGCGCAGTGAGCGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CCA 72 bp | CTTTGTCAAAGGACACAACAGACCGCTTCTCCCGGCTaGCTGACTTCCGGTCCTGACTTTTGGAGGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LCQRTQQTASPG*LTSGPDFWRLS Trigger: AGAGAGCCTCCAAAAGTCAGGACCGGAAGTCAGCCAGCCGGGAGAAGCGGTCTGTTGTGTCCTTTGACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CAA 90 bp | TCGAGCCCGTTGTCCTCCACACCCTCGTCTTCTGGTTTCCTCCCTTaGCTGGGCCTCTTAGGCATCTTCTTGTTGCATTCTGAGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: SSPLSSTPSSSGFLP*LGLLGIFLLHSEVT Trigger: AGTCACCTCAGAATGCAACAAGAAGATGCCTAAGAGGCCCAGCAAAGGGAGGAAACCAGAAGACGAGGGTGTGGAGGACAACGGGCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CAA 90 bp | GTTCGCGAGCGCTCTGAAGGCCCAGGTTTCTGGTCATCTGCGTCTTaGCTCTTCTCTGTGCTCCCATCATCTGTCTTCTTGGCATCGTCT | + |
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Preference number: 6 (lower is better) Translates to: VRERSEGPGFWSSAS*LFSVLPSSVFLASS Trigger: AGACGATGCCAAGAAGACAGATGATGGGAGCACAGAGAAGAGCAAAGACGCAGATGACCAGAAACCTGGGCCTTCAGAGCGCTCGCGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CAA 90 bp | TCCTACCACAGCTGCTGCGACCCTTCTCTTCTCGGGAAAGCCTTTTaGTATCCGAGTCCTCCTCCACAGAACTGGCTCCAAAGATGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SYHSCCDPSLLGKAF*YPSPPPQNWLQRCL Trigger: GAGGCATCTTTGGAGCCAGTTCTGTGGAGGAGGACTCGGATACAAAAAGGCTTTCCCGAGAAGAGAAGGGTCGCAGCAGCTGTGGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS GCA 72 bp | GCTCTGAAGGCCCAGGTTTCTGGTCATCTGCGTCTTTaGTCTTCTCTGTGCTCCCATCATCTGTCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: ALKAQVSGHLRL*SSLCSHHLSSW Trigger: CCAAGAAGACAGATGATGGGAGCACAGAGAAGAGCAAAGACGCAGATGACCAGAAACCTGGGCCTTCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS GCA 72 bp | TATCCGAGTCCTCCTCCACAGAACTGGCTCCAAAGATaGCTCTTCCATCTCCTGCAGCATGGTGAAGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: YPSPPPQNWLQR*LFHLLQHGEVR Trigger: TCTGACTTCACCATGCTGCAGGAGATGGAAGAGGCATCTTTGGAGCCAGTTCTGTGGAGGAGGACTCGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182951.8 |
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| CDS CAA 72 bp | GATGTTTTCACACTGATGACAGGCACACCTTTGGACTaGTCCATCACCACAGTGCGCTCAGTGCCACGGCTT | + |
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Preference number: 6 (lower is better) Translates to: DVFTLMTGTPLD*SITTVRSVPRL Trigger: AAGCCGTGGCACTGAGCGCACTGTGGTGATGGACAAGTCCAAAGGTGTGCCTGTCATCAGTGTGAAAACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CAA 72 bp | GACCCAGATGTTTTCACACTGATGACAGGCACACCTTaGGACTTGTCCATCACCACAGTGCGCTCAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: DPDVFTLMTGTP*DLSITTVRSVP Trigger: TGGCACTGAGCGCACTGTGGTGATGGACAAGTCCAAAGGTGTGCCTGTCATCAGTGTGAAAACATCTGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CAA 90 bp | TCCCTCCGAGACTCTGAGTCTCTGGACTTTCGAGACTCTTTAACTTaGTCAAAGGACACAACAGACCGCTTCTCCCGGCTGGCTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: SLRDSESLDFRDSLT*SKDTTDRFSRLADF Trigger: GAAGTCAGCCAGCCGGGAGAAGCGGTCTGTTGTGTCCTTTGACAAAGTTAAAGAGTCTCGAAAGTCCAGAGACTCAGAGTCTCGGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS TCA 72 bp | CGCTGCCATTGTCAATGTCAGCCTCATCCAGCACACTaGTGTCCATCATATCCATGTCTTGCAGGTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RCHCQCQPHPAH*CPSYPCLAGSP Trigger: TGGAGAACCTGCAAGACATGGATATGATGGACATCAGTGTGCTGGATGAGGCTGACATTGACAATGGCAGCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS TCA 72 bp | GTAATGCTGTCCTTCTCTGTCTCCCATCATCGACCGTaGACCTTCTCTCCTATCCACAGAATGGTTGGGATA | + |
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Preference number: 6 (lower is better) Translates to: VMLSFSVSHHRP*TFSPIHRMVGI Trigger: TATCCCAACCATTCTGTGGATAGGAGAGAAGGTTCACGGTCGATGATGGGAGACAGAGAAGGACAGCATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 |
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| CDS CCA 72 bp | GTCCTTGTCATCTATAGCATGCTCCTGCAGCTGTTCTaGGAGCCCTTTCAAATCTCCTTCTACCAGTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: VLVIYSMLLQLF*EPFQISFYQFS Trigger: ACTGAACTGGTAGAAGGAGATTTGAAAGGGCTCCCAGAACAGCTGCAGGAGCATGCTATAGATGACAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS CAA 90 bp | TCGTCTTCTGGTTTCCTCCCTTTGCTGGGCCTCTTAGGCATCTTCTaGTTGCATTCTGAGGTGACTTCAATTTCATCAGGATTCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: SSSGFLPLLGLLGIF*LHSEVTSISSGFPP Trigger: AGGTGGGAATCCTGATGAAATTGAAGTCACCTCAGAATGCAACAAGAAGATGCCTAAGAGGCCCAGCAAAGGGAGGAAACCAGAAGACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182800.8 |
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| CDS CAA 90 bp | TCTTCTGGTTTCCTCCCTTTGCTGGGCCTCTTAGGCATCTTCTTGTaGCATTCTGAGGTGACTTCAATTTCATCAGGATTCCCACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSGFLPLLGLLGIFL*HSEVTSISSGFPPS Trigger: TGAAGGTGGGAATCCTGATGAAATTGAAGTCACCTCAGAATGCAACAAGAAGATGCCTAAGAGGCCCAGCAAAGGGAGGAAACCAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182800.8 |
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| CDS CAA 90 bp | ATGGTGAAGTCAGATGATGACGTATCTACATTGTTAACGGTGTCCTaGTCATCTATAGCATGCTCCTGCAGCTGTTCTGGGAGCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: MVKSDDDVSTLLTVS*SSIACSCSCSGSPF Trigger: GAAAGGGCTCCCAGAACAGCTGCAGGAGCATGCTATAGATGACAAGGACACCGTTAACAATGTAGATACGTCATCATCTGACTTCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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| CDS TCA 72 bp | TTTGCTGGGCCTCTTAGGCATCTTCTTGTTGCATTCTaGGGTGACTTCAATTTCATCAGGATTCCCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: FAGPLRHLLVAF*GDFNFIRIPTF Trigger: GAAGGTGGGAATCCTGATGAAATTGAAGTCACCTCAGAATGCAACAAGAAGATGCCTAAGAGGCCCAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182800.8 |
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| CDS CAA 72 bp | TCAGATGATGACGTATCTACATTGTTAACGGTGTCCTaGTCATCTATAGCATGCTCCTGCAGCTGTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SDDDVSTLLTVS*SSIACSCSCSG Trigger: CCCAGAACAGCTGCAGGAGCATGCTATAGATGACAAGGACACCGTTAACAATGTAGATACGTCATCATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095224.11 ENSMUST00000182533.8 ENSMUST00000182951.8 |
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