Pregenerated sensors for SAE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052833Ensembl transcript IDs: ENSMUST00000094815.5, ENSMUST00000210999.2, ENSMUST00000211741.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTaGCACGTGATTATCATATTTGGGACCCCGCAGTTCCCTGATAGC | + |
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Preference number: 1 (lower is better) Translates to: ALPVPSDSPREQCQR*HVIIIFGTPQFPDS Trigger: GCTATCAGGGAACTGCGGGGTCCCAAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR TCA 90 bp | CAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTaGTTATCATATTTGGGACCCCGCAGTTCCCTGATAGCTTCGAAG | + |
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Preference number: 1 (lower is better) Translates to: QSPVTAQGSNARGAT*LSYLGPRSSLIASK Trigger: CTTCGAAGCTATCAGGGAACTGCGGGGTCCCAAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR TCA 90 bp | GCCAGGTGCTTCACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTaGGTTCCCAGCACTTGCAGGGCAGCTGATAACATCCGCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ARCFTVLLVFGEGLG*VPSTCRAADNIRSR Trigger: CCTGGAGCGGATGTTATCAGCTGCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTGAAGCACCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| 3UTR TCA 90 bp | GAAGACAAAGGCAGGATGAAGTCTGGCCTGCTTGCTCTAGAAAAATaGTCCGGAGAGAGGGCAGGTGACTCGGTGGCCTTGTACACACCT | + |
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Preference number: 1 (lower is better) Translates to: EDKGRMKSGLLALEK*SGERAGDSVALYTP Trigger: AGGTGTGTACAAGGCCACCGAGTCACCTGCCCTCTCTCCGGATCATTTTTCTAGAGCAAGCAGGCCAGACTTCATCCTGCCTTTGTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR CCA 90 bp | ATTAAAGGTAAGGTGCATAGGCTCACAACCAAAAGACATGACAACTaGGTGACAGTCTCTCCCTTCCAACACCCAGGCTCCAGCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: IKGKVHRLTTKRHDN*VTVSPFQHPGSSLR Trigger: CCTCAGGCTGGAGCCTGGGTGTTGGAAGGGAGAGACTGTCACCCAGTTGTCATGTCTTTTGGTTGTGAGCCTATGCACCTTACCTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGTCAACAACAGAGGTCTATTCTCAGTTCTCCAGGCAGCACTGGGCCTCGACTGCCAGTCCCCAGTaGCAGCCCAAGGGAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: EGSTTEVYSQFSRQHWASTASPQ*QPKGAM Trigger: CATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAGT...CGAGGCCCAGTGCTGCCTGGAGAACTGAGAATAGACCTCTGTTGTTGACCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR-3UTR GCA 90 bp | GGGTCAACAACAGAGGTCTATTCTCAGTTCTCCAGGCAGCACTGGGCCTCGGATAGCCCAAGGGAGCAATaGCAGAGGTGCCACGTGATT | + |
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Preference number: 2 (lower is better) Translates to: GSTTEVYSQFSRQHWASDSPREQ*QRCHVI Trigger: AATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCT...ATCCGAGGCCCAGTGCTGCCTGGAGAACTGAGAATAGACCTCTGTTGTTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCAACCAAGGGGATCTACAAACTAGACAGGCTGCCCTCATACTCCTAGAAGAAGACCAAACCAACTaGCCCCCAACCCACTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SSNQGDLQTRQAALILLEEDQTN*PPTHSC Trigger: ACAGGAGTGGGTTGGGGGGCAGTTGGTTTGGTCTTC...TTCTAGGAGTATGAGGGCAGCCTGTCTAGTTTGTAGATCCCCTTGGTTGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGATCAGGAGTCCAAGGGCAGTCCAGGGATGGGTGAGACCTTATATTAGGAGTACTCCTGGTTTTTaGAGAAGGCTTAGGTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RRIRSPRAVQGWVRPYIRSTPGF*RRLRLS Trigger: ACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACT...CCTAATATAAGGTCTCACCCATCCCTGGACTGCCCTTGGACTCCTGATCCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCACTGATGTCTTCTTCTaGCTTTTCTGTGCACTAGAC | + |
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Preference number: 2 (lower is better) Translates to: STPGFWRRLRLSSQHLQGTDVFF*LFCALD Trigger: GTCTAGTGCACAGAAAAGCCAGAAGAAGACATCAGT...GCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| 3UTR CCA 72 bp | CTCCTGTCAGGGGCCCGGGTGCCCAGTATAAGGAGCTaGGTAACAGTGCCCCACCCTAACTCTGGAATATGC | + |
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Preference number: 3 (lower is better) Translates to: LLSGARVPSIRS*VTVPHPNSGIC Trigger: GCATATTCCAGAGTTAGGGTGGGGCACTGTTACCCAGCTCCTTATACTGGGCACCCGGGCCCCTGACAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR TCA 72 bp | GGCAGGATGAAGTCTGGCCTGCTTGCTCTAGAAAAATaGTCCGGAGAGAGGGCAGGTGACTCGGTGGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: GRMKSGLLALEK*SGERAGDSVAL Trigger: CAAGGCCACCGAGTCACCTGCCCTCTCTCCGGATCATTTTTCTAGAGCAAGCAGGCCAGACTTCATCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR GCA 72 bp | GTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTaGCACGTGATTATCATATTTGGGACCCCGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: VPSDSPREQCQR*HVIIIFGTPQF Trigger: GAACTGCGGGGTCCCAAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR GCA 72 bp | GCACTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATaGCAGAGGTGCCACGTGATTATCATATTTGGGACC | + |
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Preference number: 3 (lower is better) Translates to: ALPVPSDSPREQ*QRCHVIIIFGT Trigger: GGTCCCAAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR TCA 72 bp | GTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTaGTTATCATATTTGGGACCCCGCAGTTCCCTGATA | + |
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Preference number: 3 (lower is better) Translates to: VTAQGSNARGAT*LSYLGPRSSLI Trigger: TATCAGGGAACTGCGGGGTCCCAAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR GCA 72 bp | GCAGCGTTGTTGTTGGTGACTGGAGAGACGGCCAGGTaGTTCACAGTACTCCTGGTTTTTGGAGAAGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: AALLLVTGETAR*FTVLLVFGEGL Trigger: TAAGCCTTCTCCAAAAACCAGGAGTACTGTGAAGCACCTGGCCGTCTCTCCAGTCACCAACAACAACGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| 3UTR CCA 72 bp | AAGGTGCATAGGCTCACAACCAAAAGACATGACAACTaGGTGACAGTCTCTCCCTTCCAACACCCAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: KVHRLTTKRHDN*VTVSPFQHPGS Trigger: GGAGCCTGGGTGTTGGAAGGGAGAGACTGTCACCCAGTTGTCATGTCTTTTGGTTGTGAGCCTATGCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| 3UTR CCA 72 bp | GGCAGGAGGATCAGGAGTCCAAGGGCAGTCCAGGGATaGGTGAGACCTTATATTAGGCAATTTCTTGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: GRRIRSPRAVQG*VRPYIRQFLVA Trigger: AGCAACAAGAAATTGCCTAATATAAGGTCTCACCCATCCCTGGACTGCCCTTGGACTCCTGATCCTCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| 3UTR TCA 72 bp | GGAGGATCAGGAGTCCAAGGGCAGTCCAGGGATGGGTaGGACCTTATATTAGGCAATTTCTTGTTGCTGCTA | + |
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Preference number: 3 (lower is better) Translates to: GGSGVQGQSRDG*DLILGNFLLLL Trigger: TAGCAGCAACAAGAAATTGCCTAATATAAGGTCTCACCCATCCCTGGACTGCCCTTGGACTCCTGATCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| 3UTR TCA 72 bp | TTCACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTaGGTTCCCAGCACTTGCAGGGCAGCTGATAACATC | + |
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Preference number: 3 (lower is better) Translates to: FTVLLVFGEGLG*VPSTCRAADNI Trigger: GATGTTATCAGCTGCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGACTCATATTATAGAAGGAGAGAACTATTCTCTACAAGTTGTCCTCTGACCTGGAGAAGGCTTAGGTaGAGTTCCCAGCACTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PDSYYRRRELFSTSCPLTWRRLR*SSQHLQ Trigger: CTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCA...GGTCAGAGGACAACTTGTAGAGAATAGTTCTCTCCTTCTATAATATGAGTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| 3UTR GCA 72 bp | AGCTGGGTAACAGTGCCCCACCCTAACTCTGGAATATaGCCTTTATTATATTTTGAGAAAGGTTCTTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: SWVTVPHPNSGI*PLLYFEKGSWY Trigger: GTACCAAGAACCTTTCTCAAAATATAATAAAGGGCATATTCCAGAGTTAGGGTGGGGCACTGTTACCCAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CCA 90 bp | CTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTGCTCGAAGCCGCTTCTaGGCCTCCAGTCCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LPVPSDSPREQCQRCHVIARSRF*ASSPHR Trigger: CCTGTGGGGACTGGAGGCCCAGAAGCGGCTTCGAGC...AATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR TCA 90 bp | CTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTGAAGCAGGTCAGGACTaGTGCCCAGGGAGTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LPVPSDSPREQCQRCHVIEAGQD*CPGSQT Trigger: TGTTTGACTCCCTGGGCATCAGTCCTGACCTGCTTC...AATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR GCA 90 bp | GGGTCAACAACAGAGGTCTATTCTCAGTTCTCCAGGCAGCACTGGGCCTCGGATAGGCCTCGGCCCTATTaGGGCCCACAGACCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GSTTEVYSQFSRQHWASDRPRPY*GPQTQS Trigger: AGACTGGGTCTGTGGGCCGCAATAGGGCCGAGGCCT...ATCCGAGGCCCAGTGCTGCCTGGAGAACTGAGAATAGACCTCTGTTGTTGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CCA 90 bp | CTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTGCTTCAGGGCAGCCTTaGCTTTCTCTCCACTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LPVPSDSPREQCQRCHVIASGQP*LSLHSS Trigger: ACTGGAGTGGAGAGAAAGCCAAGGCTGCCCTGAAGC...AATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCAGCAGGCCTCGGCCCTATTaGGGCCCACAGACCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TPGFWRRLRLSSQHLQGSRPRPY*GPQTQS Trigger: AGACTGGGTCTGTGGGCCGCAATAGGGCCGAGGCCT...GCTGCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR TCA 90 bp | GTTGAGTTCCCAGCACTTGCAGGGCAGCTGATAACATCCGCTCCAGGGGAACTGGAAGCAGGTCAGGACTaGTGCCCAGGGAGTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: VEFPALAGQLITSAPGELEAGQD*CPGSQT Trigger: TGTTTGACTCCCTGGGCATCAGTCCTGACCTGCTTC...CAGTTCCCCTGGAGCGGATGTTATCAGCTGCCCTGCAAGTGCTGGGAACTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CCA 90 bp | CTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCACGCTCGAAGCCGCTTCTaGGCCTCCAGTCCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LITSAPGELMSSSGFSVHARSRF*ASSPHR Trigger: CCTGTGGGGACTGGAGGCCCAGAAGCGGCTTCGAGC...GTGCACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR CCA 90 bp | GCAGCTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCTCGAAGCCGCTTCTaGGCCTCCAGTCCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: AADNIRSRGTDVFFWLFCARSRF*ASSPHR Trigger: CCTGTGGGGACTGGAGGCCCAGAAGCGGCTTCGAGC...ACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTAGGCCTCGGCCCTATTaGGGCCCACAGACCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: AADNIRSRGTDVFFWLFCRPRPY*GPQTQS Trigger: AGACTGGGTCTGTGGGCCGCAATAGGGCCGAGGCCT...ACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CCA 90 bp | GTTGAGTTCCCAGCACTTGCAGGGCAGCTGATAACATCCGCTCCAGGGGAACTGAACCACAGCACATACTaGGGCCATCTCAGAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: VEFPALAGQLITSAPGELNHSTY*GHLREA Trigger: TGCTTCTCTGAGATGGCCCCAGTATGTGCTGTGGTT...CAGTTCCCCTGGAGCGGATGTTATCAGCTGCCCTGCAAGTGCTGGGAACTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR TCA 90 bp | GAAGGGTCAACAACAGAGGTCTATTCTCAGTTCTCCAGGCAGCACTGGGCCTCGCAGAGAAGCAGTACCTaGCAAAGTCATCGGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: EGSTTEVYSQFSRQHWASQRSST*QSHREA Trigger: TGCTTCCCGATGACTTTGTCAGGTACTGCTTCTCTG...CGAGGCCCAGTGCTGCCTGGAGAACTGAGAATAGACCTCTGTTGTTGACCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR GCA 90 bp | AGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCACGTCATTCCGTATCTaGAGCAGCAGCTCCGCATCC | + |
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Preference number: 4 (lower is better) Translates to: STPGFWRRLRLSSQHLQGTSFRI*SSSSAS Trigger: GGATGCGGAGCTGCTGCTGCAGATACGGAATGACGT...GCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CCA 90 bp | GGGTCAACAACAGAGGTCTATTCTCAGTTCTCCAGGCAGCACTGGGCCTCGGATAACCACAGCACATACTaGGGCCATCTCAGAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: GSTTEVYSQFSRQHWASDNHSTY*GHLREA Trigger: TGCTTCTCTGAGATGGCCCCAGTATGTGCTGTGGTT...ATCCGAGGCCCAGTGCTGCCTGGAGAACTGAGAATAGACCTCTGTTGTTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR TCA 90 bp | CTTCTTCTGGCTTTTCTGTGCACTAGACACACATGGTGCCCAGACAAACCTCAGGAAGCAGGTCAGGACTaGTGCCCAGGGAGTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LLLAFLCTRHTWCPDKPQEAGQD*CPGSQT Trigger: TGTTTGACTCCCTGGGCATCAGTCCTGACCTGCTTC...CTGAGGTTTGTCTGGGCACCATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR TCA 90 bp | ACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCAGCCAGAGAAGCAGTACCTaGCAAAGTCATCGGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: TPGFWRRLRLSSQHLQGSQRSST*QSHREA Trigger: TGCTTCCCGATGACTTTGTCAGGTACTGCTTCTCTG...GCTGCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR GCA 90 bp | CCTGATAGCTTCGAAGACAAAGGCAGGATGAAGTCTGGCCTGCTTGCTCTAGAAACGTCATTCCGTATCTaGAGCAGCAGCTCCGCATCC | + |
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Preference number: 4 (lower is better) Translates to: PDSFEDKGRMKSGLLALETSFRI*SSSSAS Trigger: GGATGCGGAGCTGCTGCTGCAGATACGGAATGACGT...TTCTAGAGCAAGCAGGCCAGACTTCATCCTGCCTTTGTCTTCGAAGCTATCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CCA 90 bp | CTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTCTCCTTGGCTTACTTTaGCAACTTTGGTTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPVPSDSPREQCQRCHVILLGLL*QLWFSL Trigger: AAGAGAAAACCAAAGTTGCCAAAGTAAGCCAAGGAG...AATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CCA 90 bp | GCAGCTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCTTCAGGGCAGCCTTaGCTTTCTCTCCACTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: AADNIRSRGTDVFFWLFCASGQP*LSLHSS Trigger: ACTGGAGTGGAGAGAAAGCCAAGGCTGCCCTGAAGC...ACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CCA 90 bp | GTGCTTCACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACGCTTCAGGGCAGCCTTaGCTTTCTCTCCACTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VLHSTPGFWRRLRLSSQHASGQP*LSLHSS Trigger: ACTGGAGTGGAGAGAAAGCCAAGGCTGCCCTGAAGC...GTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTGAAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| CDS-3UTR GCA 90 bp | CTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTTCTTCTACAAATTCATaGTCTCCAAGATTCGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LPVPSDSPREQCQRCHVISSTNS*SPRFAK Trigger: CTTTGCGAATCTTGGAGAGCATGAATTTGTAGAAGA...AATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CCA 90 bp | CCTGATAGCTTCGAAGACAAAGGCAGGATGAAGTCTGGCCTGCTTGCTCTAGAAAGCTCCAGGGTCTTCTaGAGATACCTGTTCGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PDSFEDKGRMKSGLLALESSRVF*RYLFVV Trigger: GACCACGAACAGGTATCTCCAGAAGACCCTGGAGCT...TTCTAGAGCAAGCAGGCCAGACTTCATCCTGCCTTTGTCTTCGAAGCTATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CCA 90 bp | CGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCACTAGACACACATAGCTCCAGGGTCTTCTaGAGATACCTGTTCGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RSRGTDVFFWLFCALDTHSSRVF*RYLFVV Trigger: GACCACGAACAGGTATCTCCAGAAGACCCTGGAGCT...ATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR CCA 90 bp | ACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCAGCCGTGAAGAAGGACTCTaGCTTCTTCTCTACATCCTC | + |
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Preference number: 4 (lower is better) Translates to: TPGFWRRLRLSSQHLQGSREEGL*LLLYIL Trigger: GAGGATGTAGAGAAGAAGCCAGAGTCCTTCTTCACG...GCTGCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR TCA 90 bp | TCCAGCAACCAAGGGGATCTACAAACTAGACAGGCTGCCCTCATACTCCTAGAACCGCATCAAACTTCGTaGAGAAGGACTCTGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SSNQGDLQTRQAALILLEPHQTS*RRTLAS Trigger: AGAAGCCAGAGTCCTTCTTCACGAAGTTTGATGCGG...TTCTAGGAGTATGAGGGCAGCCTGTCTAGTTTGTAGATCCCCTTGGTTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR TCA 90 bp | GTCTTCTTCTGGCTTTTCTGTGCACTAGACACACATGGTGCCCAGACAAACCTCCCGCATCAAACTTCGTaGAGAAGGACTCTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFFWLFCALDTHGAQTNLPHQTS*RRTLAS Trigger: AGAAGCCAGAGTCCTTCTTCACGAAGTTTGATGCGG...GAGGTTTGTCTGGGCACCATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR TCA 90 bp | CACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGCCGCATCAAACTTCGTaGAGAAGGACTCTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSTPGFWRRLRLSSQHLQPHQTS*RRTLAS Trigger: AGAAGCCAGAGTCCTTCTTCACGAAGTTTGATGCGG...CTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR TCA 90 bp | CGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCACTAGACACACATCAGAGAAGCAGTACCTaGCAAAGTCATCGGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSRGTDVFFWLFCALDTHQRSST*QSHREA Trigger: TGCTTCCCGATGACTTTGTCAGGTACTGCTTCTCTG...ATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR CCA 90 bp | CCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTATCATATTTCGTGAAGAAGGACTCTaGCTTCTTCTCTACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSDSPREQCQRCHVIIIFREEGL*LLLYIL Trigger: GAGGATGTAGAGAAGAAGCCAGAGTCCTTCTTCACG...AAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CCA 90 bp | CGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCACTAGACACACATAACCACAGCACATACTaGGGCCATCTCAGAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSRGTDVFFWLFCALDTHNHSTY*GHLREA Trigger: TGCTTCTCTGAGATGGCCCCAGTATGTGCTGTGGTT...ATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR GCA 90 bp | TCCAGCAACCAAGGGGATCTACAAACTAGACAGGCTGCCCTCATACTCCTAGAATTCCACTCCCCTTCATaGCGTCGAAGAAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSNQGDLQTRQAALILLEFHSPS*RRRRRS Trigger: ACTTCTTCTTCTTCGACGGCATGAAGGGGAGTGGAA...TTCTAGGAGTATGAGGGCAGCCTGTCTAGTTTGTAGATCCCCTTGGTTGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR GCA 90 bp | CTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCACTTCCACTCCCCTTCATaGCGTCGAAGAAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LITSAPGELMSSSGFSVHFHSPS*RRRRRS Trigger: ACTTCTTCTTCTTCGACGGCATGAAGGGGAGTGGAA...GTGCACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR CCA 90 bp | CCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTATCATATTTCCATCTTCCACTCCTTaGCTTACTTTGGCAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSDSPREQCQRCHVIIIFPSSTP*LTLATL Trigger: CAAAGTTGCCAAAGTAAGCCAAGGAGTGGAAGATGG...AAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCAGCCTCCTTGGCTTACTTTaGCAACTTTGGTTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPGFWRRLRLSSQHLQGSLLGLL*QLWFSL Trigger: AAGAGAAAACCAAAGTTGCCAAAGTAAGCCAAGGAG...GCTGCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CCA 90 bp | CACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGCCATCTTCCACTCCTTaGCTTACTTTGGCAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSTPGFWRRLRLSSQHLQPSSTP*LTLATL Trigger: CAAAGTTGCCAAAGTAAGCCAAGGAGTGGAAGATGG...CTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCCCTGATAGCTTCGAAGACAAAGGCAGGATGAAGTCTGGCCTGCTTGCTTTAATGCTGTTTCTGTaGCAGATCTGGTCGACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QFPDSFEDKGRMKSGLLALMLFL*QIWSTL Trigger: TAAAGTCGACCAGATCTGTCACAGAAACAGCATTAA...AGCAAGCAGGCCAGACTTCATCCTGCCTTTGTCTTCGAAGCTATCAGGGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR TCA 90 bp | CCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTATCATATTTAAAGCACTTTCTTTTTaGCCATGGTTGTCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PSDSPREQCQRCHVIIIFKALSF*PWLSLM Trigger: CATCAGAGACAACCATGGTCAAAAAGAAAGTGCTTT...AAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR GCA 90 bp | CCAGACTCATATTATAGAAGGAGAGAACTATTCTCTACAAGTTGTCCTCTGACCACGTCATTCCGTATCTaGAGCAGCAGCTCCGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PDSYYRRRELFSTSCPLTTSFRI*SSSSAS Trigger: GGATGCGGAGCTGCTGCTGCAGATACGGAATGACGT...GGTCAGAGGACAACTTGTAGAGAATAGTTCTCTCCTTCTATAATATGAGTCTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| CDS-3UTR TCA 90 bp | CTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCACTTAATGCTGTTTCTGTaGCAGATCTGGTCGACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LITSAPGELMSSSGFSVHLMLFL*QIWSTL Trigger: TAAAGTCGACCAGATCTGTCACAGAAACAGCATTAA...GTGCACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR TCA 90 bp | CACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGAAAGCACTTTCTTTTTaGCCATGGTTGTCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HSTPGFWRRLRLSSQHLQKALSF*PWLSLM Trigger: CATCAGAGACAACCATGGTCAAAAAGAAAGTGCTTT...CTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CCA 90 bp | GTCTTCTTCTGGCTTTTCTGTGCACTAGACACACATGGTGCCCAGACAAACCTCCTCCTTGGCTTACTTTaGCAACTTTGGTTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFFWLFCALDTHGAQTNLLLGLL*QLWFSL Trigger: AAGAGAAAACCAAAGTTGCCAAAGTAAGCCAAGGAG...GAGGTTTGTCTGGGCACCATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR GCA 90 bp | CTTCTTCTGGCTTTTCTGTGCACTAGACACACATGGTGCCCAGACAAACCTCAGTCTTCTACAAATTCATaGTCTCCAAGATTCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLAFLCTRHTWCPDKPQSSTNS*SPRFAK Trigger: CTTTGCGAATCTTGGAGAGCATGAATTTGTAGAAGA...CTGAGGTTTGTCTGGGCACCATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR CCA 90 bp | CCAGACTCATATTATAGAAGGAGAGAACTATTCTCTACAAGTTGTCCTCTGACCCGTGAAGAAGGACTCTaGCTTCTTCTCTACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PDSYYRRRELFSTSCPLTREEGL*LLLYIL Trigger: GAGGATGTAGAGAAGAAGCCAGAGTCCTTCTTCACG...GGTCAGAGGACAACTTGTAGAGAATAGTTCTCTCCTTCTATAATATGAGTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGCCCCCAGACTCATATTATAGAAGGAGAGAACTATTCTCTACAAGTTGTCCATCTTCCACTCCTTaGCTTACTTTGGCAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQPPDSYYRRRELFSTSCPSSTP*LTLATL Trigger: CAAAGTTGCCAAAGTAAGCCAAGGAGTGGAAGATGG...ACAACTTGTAGAGAATAGTTCTCTCCTTCTATAATATGAGTCTGGGGGCTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| CDS-3UTR TCA 90 bp | GGATGGGTGAGACCTTATATTAGGCAATTTCTTGTTGCTGCTACCAAAATATTTAAAGCACTTTCTTTTTaGCCATGGTTGTCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GWVRPYIRQFLVAATKIFKALSF*PWLSLM Trigger: CATCAGAGACAACCATGGTCAAAAAGAAAGTGCTTT...AAATATTTTGGTAGCAGCAACAAGAAATTGCCTAATATAAGGTCTCACCCATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
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| CDS-3UTR CAA 90 bp | GGGTCAACAACAGAGGTCTATTCTCAGTTCTCCAGGCAGCACTGGGCCTCGGATGAGGCCTCGGCCCTATaGCGGCCCACAGACCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSTTEVYSQFSRQHWASDEASAL*RPTDPV Trigger: GACTGGGTCTGTGGGCCGCAATAGGGCCGAGGCCTC...ATCCGAGGCCCAGTGCTGCCTGGAGAACTGAGAATAGACCTCTGTTGTTGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CAA 90 bp | GCAGCTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGAGGCCTCGGCCCTATaGCGGCCCACAGACCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AADNIRSRGTDVFFWLFCEASAL*RPTDPV Trigger: GACTGGGTCTGTGGGCCGCAATAGGGCCGAGGCCTC...ACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CAA 90 bp | CACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGAGGCCTCGGCCCTATaGCGGCCCACAGACCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HSTPGFWRRLRLSSQHLQEASAL*RPTDPV Trigger: GACTGGGTCTGTGGGCCGCAATAGGGCCGAGGCCTC...CTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CAA 90 bp | CTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTCTGATGAATCAAGCTTaGCTCTCTTGGCCTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPVPSDSPREQCQRCHVILMNQA*LSWPQV Trigger: GACCTGAGGCCAAGAGAGCAAAGCTTGATTCATCAG...AATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CAA 90 bp | CAGTTCCCTGATAGCTTCGAAGACAAAGGCAGGATGAAGTCTGGCCTGCTTGCTCGCTTCAGGGCAGCCTaGGCTTTCTCTCCACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QFPDSFEDKGRMKSGLLARFRAA*AFSPLQ Trigger: CTGGAGTGGAGAGAAAGCCAAGGCTGCCCTGAAGCG...AGCAAGCAGGCCAGACTTCATCCTGCCTTTGTCTTCGAAGCTATCAGGGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CAA 90 bp | CTGCCAGTCCCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTTCCATCTTCCACTCCTaGGCTTACTTTGGCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPVPSDSPREQCQRCHVISIFHS*AYFGNF Trigger: AAAGTTGCCAAAGTAAGCCAAGGAGTGGAAGATGGA...AATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGGGACTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CAA 90 bp | GAAGGGTCAACAACAGAGGTCTATTCTCAGTTCTCCAGGCAGCACTGGGCCTCGTCAAGCTTTGCTCTCTaGGCCTCAGGTCCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGSTTEVYSQFSRQHWASSSFAL*ASGPSS Trigger: GGAAGATGGACCTGAGGCCAAGAGAGCAAAGCTTGA...CGAGGCCCAGTGCTGCCTGGAGAACTGAGAATAGACCTCTGTTGTTGACCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CAA 90 bp | CTTCTTCTGGCTTTTCTGTGCACTAGACACACATGGTGCCCAGACAAACCTCAGCGCTTCAGGGCAGCCTaGGCTTTCTCTCCACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLAFLCTRHTWCPDKPQRFRAA*AFSPLQ Trigger: CTGGAGTGGAGAGAAAGCCAAGGCTGCCCTGAAGCG...CTGAGGTTTGTCTGGGCACCATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR CAA 90 bp | GTGCTTCACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACCGCTTCAGGGCAGCCTaGGCTTTCTCTCCACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLHSTPGFWRRLRLSSQHRFRAA*AFSPLQ Trigger: CTGGAGTGGAGAGAAAGCCAAGGCTGCCCTGAAGCG...GTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTGAAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211741.2 |
||
| CDS-3UTR CAA 90 bp | GTTGAGTTCCCAGCACTTGCAGGGCAGCTGATAACATCCGCTCCAGGGGAACTGGAATTTCAGCAGCACTaGCAGCAGAAAGTAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VEFPALAGQLITSAPGELEFQQH*QQKVVG Trigger: CCCGACTACTTTCTGCTGCAAGTGCTGCTGAAATTC...CAGTTCCCCTGGAGCGGATGTTATCAGCTGCCCTGCAAGTGCTGGGAACTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CAA 90 bp | CAGTTCCCTGATAGCTTCGAAGACAAAGGCAGGATGAAGTCTGGCCTGCTTGCTAGCATGGTGAGCCCTTaGACTCCTGCCAGGATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QFPDSFEDKGRMKSGLLASMVSP*TPARIR Trigger: TCTTATCCTGGCAGGAGTCAAAGGGCTCACCATGCT...AGCAAGCAGGCCAGACTTCATCCTGCCTTTGTCTTCGAAGCTATCAGGGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
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| CDS-3UTR CAA 90 bp | AGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCAGCATGGTGAGCCCTTaGACTCCTGCCAGGATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: STPGFWRRLRLSSQHLQGSMVSP*TPARIR Trigger: TCTTATCCTGGCAGGAGTCAAAGGGCTCACCATGCT...GCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CAA 90 bp | CACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGTCAAGCTTTGCTCTCTaGGCCTCAGGTCCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSTPGFWRRLRLSSQHLQSSFAL*ASGPSS Trigger: GGAAGATGGACCTGAGGCCAAGAGAGCAAAGCTTGA...CTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CAA 90 bp | ACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCAGCTCCATCTTCCACTCCTaGGCTTACTTTGGCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPGFWRRLRLSSQHLQGSSIFHS*AYFGNF Trigger: AAAGTTGCCAAAGTAAGCCAAGGAGTGGAAGATGGA...GCTGCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CAA 90 bp | GTCTTCTTCTGGCTTTTCTGTGCACTAGACACACATGGTGCCCAGACAAACCTCCTGATGAATCAAGCTTaGCTCTCTTGGCCTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFFWLFCALDTHGAQTNLLMNQA*LSWPQV Trigger: GACCTGAGGCCAAGAGAGCAAAGCTTGATTCATCAG...GAGGTTTGTCTGGGCACCATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTCTGATGAATCAAGCTTaGCTCTCTTGGCCTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AADNIRSRGTDVFFWLFCLMNQA*LSWPQV Trigger: GACCTGAGGCCAAGAGAGCAAAGCTTGATTCATCAG...ACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
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| CDS-3UTR CAA 90 bp | CCTGATAGCTTCGAAGACAAAGGCAGGATGAAGTCTGGCCTGCTTGCTCTAGAAGAATTTCAGCAGCACTaGCAGCAGAAAGTAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDSFEDKGRMKSGLLALEEFQQH*QQKVVG Trigger: CCCGACTACTTTCTGCTGCAAGTGCTGCTGAAATTC...TTCTAGAGCAAGCAGGCCAGACTTCATCCTGCCTTTGTCTTCGAAGCTATCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
||
| CDS-3UTR CAA 90 bp | CGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCACTAGACACACATGAATTTCAGCAGCACTaGCAGCAGAAAGTAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRGTDVFFWLFCALDTHEFQQH*QQKVVG Trigger: CCCGACTACTTTCTGCTGCAAGTGCTGCTGAAATTC...ATGTGTGTCTAGTGCACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
||
| CDS-3UTR CAA 90 bp | AGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGGGCTCCATCTTCCACTCCTaGGCTTACTTTGGCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: STPGFWRRLRLSSQHLQGSIFHS*AYFGNF Trigger: AAAGTTGCCAAAGTAAGCCAAGGAGTGGAAGATGGA...GCCCTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTGACAGCCCAAGGGAGCAATGCCAGAGGTGCCACGTGATTATCATATTTAAAAGCACTTTCTTTTaGACCATGGTTGTCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PSDSPREQCQRCHVIIIFKSTFF*TMVVSD Trigger: ATCAGAGACAACCATGGTCAAAAAGAAAGTGCTTTT...AAATATGATAATCACGTGGCACCTCTGGCATTGCTCCCTTGGGCTGTCACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094815.5 |
||
| CDS CCA 90 bp | GAATCAAGCTTTGCTCTCTTGGCCTCAGGTCCATCTTCCACTCCTTaGCTTACTTTGGCAACTTTGGTTTTCTCTTCTACAAATTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: ESSFALLASGPSSTP*LTLATLVFSSTNSC Trigger: GCATGAATTTGTAGAAGAGAAAACCAAAGTTGCCAAAGTAAGCCAAGGAGTGGAAGATGGACCTGAGGCCAAGAGAGCAAAGCTTGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094815.5 ENSMUST00000210999.2 ENSMUST00000211741.2 |
||
| CDS-3UTR CAA 90 bp | CTGATAACATCCGCTCCAGGGGAACTGATGTCTTCTTCTGGCTTTTCTGTGCACAAAAGCACTTTCTTTTaGACCATGGTTGTCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LITSAPGELMSSSGFSVHKSTFF*TMVVSD Trigger: ATCAGAGACAACCATGGTCAAAAAGAAAGTGCTTTT...GTGCACAGAAAAGCCAGAAGAAGACATCAGTTCCCCTGGAGCGGATGTTATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000210999.2 |
||
| CDS-3UTR CAA 90 bp | CACAGTACTCCTGGTTTTTGGAGAAGGCTTAGGTTGAGTTCCCAGCACTTGCAGAAAAGCACTTTCTTTTaGACCATGGTTGTCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HSTPGFWRRLRLSSQHLQKSTFF*TMVVSD Trigger: ATCAGAGACAACCATGGTCAAAAAGAAAGTGCTTTT...CTGCAAGTGCTGGGAACTCAACCTAAGCCTTCTCCAAAAACCAGGAGTACTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000210999.2 ENSMUST00000211741.2 |
||
| CDS CCA 90 bp | TCTTCTACAAATTCATGCTCTCCAAGATTCGCAAAGGTGTACCCATaGTACCCAAAGACATCTCCTGTGAAGAACTTAATGCTGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTNSCSPRFAKVYP*YPKTSPVKNLMLFL Trigger: CAGAAACAGCATTAAGTTCTTCACAGGAGATGTCTTTGGGTACCATGGGTACACCTTTGCGAATCTTGGAGAGCATGAATTTGTAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094815.5 ENSMUST00000210999.2 ENSMUST00000211741.2 |
||
| CDS TCA 72 bp | GGATCTGTCGGTCATACTGCGCTGCCTCCTCCTCGCTaGTGCCACCGCCGCCGCCGCCGCCAGCCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSVGHTALPPPR*CHRRRRRQPPP Trigger: AGGAGGAGGCTGGCGGCGGCGGCGGCGGTGGCATCAGCGAGGAGGAGGCAGCGCAGTATGACCGACAGATCC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094815.5 ENSMUST00000210999.2 ENSMUST00000211741.2 |
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