Pregenerated sensors for SAC3D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024790Ensembl transcript IDs: ENSMUST00000113533.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CTTTTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTaGTCTGACCCAGGCCTTGTGGGAGACGAGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: LLLFGNYEKEAR*SDPGLVGDETL Trigger: GAGGGTCTCGTCTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR TCA 90 bp | TTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGACGACAGCCAACGCCGCCTaGAGGGGTGGGCAGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: LGIMKKKPGALTQALWETTANAA*RGGQAR Trigger: GCGTGCCTGCCCACCCCTTCAGGCGGCGTTGGCTGT...CGTCTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CCA 90 bp | TTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGTTCCCACGGCCGCCTaGCTCCACCTCCAGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LFGNYEKEARCSDPGLVGVPTAA*LHLQSV Trigger: CACCGACTGGAGGTGGAGCCAGGCGGCCGTGGGAAC...TCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR TCA 90 bp | TATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGACGAGACCCTCCACCTTCCTCAGCCATaGCCACATCTTCCAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: YEKEARCSDPGLVGDETLHLPQP*PHLPGC Trigger: ACACCCTGGAAGATGTGGTCATGGCTGAGGAAGGTG...GAGGGTCTCGTCTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR GCA 90 bp | GGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGACGAGATGTACTCCTTCACTGTaGGCTTGGGGTCGGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GIMKKKPGALTQALWETRCTPSL*AWGRLG Trigger: CCCGAGCCGACCCCAAGCGCACAGTGAAGGAGTACA...TCTCGTCTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR GCA 90 bp | GGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGACGAGACTGGCACAGGTCCCGTaGTTCCTGGAGTCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: GIMKKKPGALTQALWETRLAQVP*FLESIQ Trigger: CTGGATGGACTCCAGGAAGCACGGGACCTGTGCCAG...TCTCGTCTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CCA 90 bp | TTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGTCCGCGCGTCTCTTCTaGCCGCACCCGCGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LLFGNYEKEARCSDPGLVSARLF*PHPRHH Trigger: GTGGTGGCGCGGGTGCGGCCAGAAGAGACGCGCGGA...CACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CCA 90 bp | TTTTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGCGCCGCCTGAAGGGGTaGGCAGGCACGCAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FYCLGIMKKKPGALTQALRRLKG*AGTQGS Trigger: GCTGCCCTGCGTGCCTGCCCACCCCTTCAGGCGGCG...CAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CCA 90 bp | TATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGACTCGAGCCCCAGTCTaGCCAAACGCAGCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YCLGIMKKKPGALTQALWTRAPV*PNAACR Trigger: GCGGCAGGCTGCGTTTGGCCAGACTGGGGCTCGAGT...CCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR GCA 90 bp | GGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGACGAGAGTAGGTAGGGTAAGGTaGGAAGCAGGCGAAACAGTC | + |
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Preference number: 4 (lower is better) Translates to: GIMKKKPGALTQALWETRVGRVR*EAGETV Trigger: GACTGTTTCGCCTGCTTCGCACCTTACCCTACCTAC...TCTCGTCTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR GCA 90 bp | GGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGACGAGATACCCAATGTGTTCCTaGACTGCGCAGCTCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GIMKKKPGALTQALWETRYPMCS*TAQLCR Trigger: CCTACAGAGCTGCGCAGTGCAGGAACACATTGGGTA...TCTCGTCTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CCA 90 bp | ATGAGTTCCTTTTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCCACGGCCAGCAGCGTaGCCAGCGCAGCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: MSSFYCLGIMKKKPGALTPRPAA*PAQPPA Trigger: TGCTGGAGGCTGCGCTGGCCACGCTGCTGGCCGTGG...GGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAAAAGGAACTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CCA 90 bp | TTTTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGGTCAGTCCATGGGCCTaGCACAGGTCCCGTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FYCLGIMKKKPGALTQALVSPWA*HRSRAS Trigger: GGAAGCACGGGACCTGTGCCAGGCCCATGGACTGAC...CAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCTCCAAGGTCAGTCCATaGGCCTGGCACAGGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: FLLLFGNYEKEARCSDPGSKVSP*AWHRSR Trigger: ACGGGACCTGTGCCAGGCCCATGGACTGACCTTGGA...GCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR GCA 90 bp | TTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGAGCTGTAGAACCTCCTaGAGGGCTTCCACAGAACCC | + |
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Preference number: 4 (lower is better) Translates to: LLFGNYEKEARCSDPGLVSCRTS*RASTEP Trigger: GGGTTCTGTGGAAGCCCTGCAGGAGGTTCTACAGCT...CACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR GCA 90 bp | TGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGTCCAGGGTGTGTCCCTaGAACTTATTCCCCACTAAT | + |
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Preference number: 4 (lower is better) Translates to: CLGIMKKKPGALTQALWESRVCP*NLFPTN Trigger: ATTAGTGGGGAATAAGTTGCAGGGACACACCCTGGA...CTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR TCA 90 bp | AGTTCCTTTTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCAGAGCCAGGTCTGTaGATGTCACCTTCCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSFYCLGIMKKKPGALTQAEPGL*MSPSSA Trigger: GGCTGAGGAAGGTGACATTCACAGACCTGGCTCTGC...CTGGGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAAAAGGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CCA 90 bp | ATGAGTTCCTTTTATTGTTTGGGAATTATGAAAAAGAAGCCAGGTGCTCTGACCAGGTCCCGTGCTTCCTaGAGTCCATCCAGGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: MSSFYCLGIMKKKPGALTRSRAS*SPSRAR Trigger: TCTGGCCCTGGATGGACTCCAGGAAGCACGGGACCT...GGTCAGAGCACCTGGCTTCTTTTTCATAATTCCCAAACAATAAAAGGAACTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 90 bp | CACTGTGCGCTTGGGGTCGGCTCGGGGAGCGTTCCCACGGCCGCCTaGCTCCACCTCCAGTCGGTGCAGGCGGCGCTCGCGCTCGCGTCG | + |
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Preference number: 5 (lower is better) Translates to: HCALGVGSGSVPTAA*LHLQSVQAALALAS Trigger: CGACGCGAGCGCGAGCGCCGCCTGCACCGACTGGAGGTGGAGCCAGGCGGCCGTGGGAACGCTCCCCGAGCCGACCCCAAGCGCACAGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 90 bp | CGCGCGTCTCTTCTGGCCGCACCCGCGCCACCACGGCCAGCAGCGTaGCCAGCGCAGCCTCCAGCACTGTCGCTGCGTCCGCGTCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RASLLAAPAPPRPAA*PAQPPALSLRPRRP Trigger: TGGACGACGCGGACGCAGCGACAGTGCTGGAGGCTGCGCTGGCCACGCTGCTGGCCGTGGTGGCGCGGGTGCGGCCAGAAGAGACGCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 90 bp | ACACGTCGCCGCGGCCAGCCACCTCACCGGCCAGATAACGCACGGTaGCTAAGAGCACTGGCGGCGGCCGCAGCAGGCTTGGCGGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TRRRGQPPHRPDNAR*LRALAAAAAGLAGA Trigger: GGCCCCCGCCAAGCCTGCTGCGGCCGCCGCCAGTGCTCTTAGCCACCGTGCGTTATCTGGCCGGTGAGGTGGCTGGCCGCGGCGACGTGT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 90 bp | GGGGTTTGCCCGCTGCCGGCCGGCTGTACTCCTTCACTGTGCGCTTaGGGTCGGCTCGGGGAGCGTTCCCACGGCCGCCTGGCTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: GVCPLPAGCTPSLCA*GRLGERSHGRLAPP Trigger: AGGTGGAGCCAGGCGGCCGTGGGAACGCTCCCCGAGCCGACCCCAAGCGCACAGTGAAGGAGTACAGCCGGCCGGCAGCGGGCAAACCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 90 bp | AGCGCAGCCTCCAGCACTGTCGCTGCGTCCGCGTCGTCCACGCCCTaGAGCGACAGATCTAGCCGCACTGCGCGCAGGCGGTCGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SAASSTVAASASSTP*SDRSSRTARRRSAT Trigger: TGTGGCCGACCGCCTGCGCGCAGTGCGGCTAGATCTGTCGCTGCAGGGCGTGGACGACGCGGACGCAGCGACAGTGCTGGAGGCTGCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 90 bp | GGGCTCGAGGGACAGACTCGAGCCCCAGTCTGGCCAAACGCAGCCTaGCGCGGCTTTCTCGATTTGCCGCTCCCGCGGCCTTTAGAAACG | + |
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Preference number: 5 (lower is better) Translates to: GLEGQTRAPVWPNAA*RGFLDLPLPRPLET Trigger: CGTTTCTAAAGGCCGCGGGAGCGGCAAATCGAGAAAGCCGCGGCAGGCTGCGTTTGGCCAGACTGGGGCTCGAGTCTGTCCCTCGAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 90 bp | TTATCCAAGGTCAGTCCATGGGCCTGGCACAGGTCCCGTGCTTCCTaGAGTCCATCCAGGGCCAGAAAGTGTTCTATGAAGTCCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: LSKVSPWAWHRSRAS*SPSRARKCSMKSKG Trigger: GCCTTTGGACTTCATAGAACACTTTCTGGCCCTGGATGGACTCCAGGAAGCACGGGACCTGTGCCAGGCCCATGGACTGACCTTGGATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 90 bp | TCTGTCTTTATCCAAGGTCAGTCCATGGGCCTGGCACAGGTCCCGTaGTTCCTGGAGTCCATCCAGGGCCAGAAAGTGTTCTATGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SVFIQGQSMGLAQVP*FLESIQGQKVFYEV Trigger: GACTTCATAGAACACTTTCTGGCCCTGGATGGACTCCAGGAAGCACGGGACCTGTGCCAGGCCCATGGACTGACCTTGGATAAAGACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS-3UTR CAA 90 bp | ATTATGAAAAAGAAGCCAGGTGCTCTGACCCAGGCCTTGTGGGAGACGAGACCCTCCTTCCTCAGAGTATaGACCCCTCAGGAATACAAC | + |
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Preference number: 5 (lower is better) Translates to: IMKKKPGALTQALWETRPSFLRV*TPQEYN Trigger: GTTGTATTCCTGAGGGGTCAATACTCTGAGGAAGGA...GGGTCTCGTCTCCCACAAGGCCTGGGTCAGAGCACCTGGCTTCTTTTTCATAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 72 bp | GCGTTCCCACGGCCGCCTGGCTCCACCTCCAGTCGGTaGAGGCGGCGCTCGCGCTCGCGTCGGGCGCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: AFPRPPGSTSSR*RRRSRSRRARS Trigger: CGAGCGCGCCCGACGCGAGCGCGAGCGCCGCCTGCACCGACTGGAGGTGGAGCCAGGCGGCCGTGGGAACGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CAA 72 bp | CGGTGGCTAAGAGCACTGGCGGCGGCCGCAGCAGGCTaGGCGGGGGCCGGGGTTTGCCCGCTGCCGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: RWLRALAAAAAG*AGAGVCPLPAG Trigger: GCCGGCCGGCAGCGGGCAAACCCCGGCCCCCGCCAAGCCTGCTGCGGCCGCCGCCAGTGCTCTTAGCCACCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 72 bp | CCGCAGCAGGCTTGGCGGGGGCCGGGGTTTGCCCGCTaGCGGCCGGCTGTACTCCTTCACTGTGCGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PQQAWRGPGFAR*RPAVLLHCALG Trigger: CCCAAGCGCACAGTGAAGGAGTACAGCCGGCCGGCAGCGGGCAAACCCCGGCCCCCGCCAAGCCTGCTGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 72 bp | CCGCTGCCGGCCGGCTGTACTCCTTCACTGTGCGCTTaGGGTCGGCTCGGGGAGCGTTCCCACGGCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLPAGCTPSLCA*GRLGERSHGRL Trigger: CAGGCGGCCGTGGGAACGCTCCCCGAGCCGACCCCAAGCGCACAGTGAAGGAGTACAGCCGGCCGGCAGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CAA 72 bp | CCCGCTGCCGGCCGGCTGTACTCCTTCACTGTGCGCTaGGGGTCGGCTCGGGGAGCGTTCCCACGGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: PAAGRLYSFTVR*GSARGAFPRPP Trigger: AGGCGGCCGTGGGAACGCTCCCCGAGCCGACCCCAAGCGCACAGTGAAGGAGTACAGCCGGCCGGCAGCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CAA 90 bp | GATAACGCACGGTGGCTAAGAGCACTGGCGGCGGCCGCAGCAGGCTaGGCGGGGGCCGGGGTTTGCCCGCTGCCGGCCGGCTGTACTCCT | + |
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Preference number: 6 (lower is better) Translates to: DNARWLRALAAAAAG*AGAGVCPLPAGCTP Trigger: AGGAGTACAGCCGGCCGGCAGCGGGCAAACCCCGGCCCCCGCCAAGCCTGCTGCGGCCGCCGCCAGTGCTCTTAGCCACCGTGCGTTATC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 72 bp | GTTTGCCCGCTGCCGGCCGGCTGTACTCCTTCACTGTaGGCTTGGGGTCGGCTCGGGGAGCGTTCCCACGGC | + |
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Preference number: 6 (lower is better) Translates to: VCPLPAGCTPSL*AWGRLGERSHG Trigger: GCCGTGGGAACGCTCCCCGAGCCGACCCCAAGCGCACAGTGAAGGAGTACAGCCGGCCGGCAGCGGGCAAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 72 bp | CAGCAGCGTGGCCAGCGCAGCCTCCAGCACTGTCGCTaGGTCCGCGTCGTCCACGCCCTGCAGCGACAGATC | + |
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Preference number: 6 (lower is better) Translates to: QQRGQRSLQHCR*VRVVHALQRQI Trigger: GATCTGTCGCTGCAGGGCGTGGACGACGCGGACGCAGCGACAGTGCTGGAGGCTGCGCTGGCCACGCTGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 72 bp | CGCGGCCAGCCACCTCACCGGCCAGATAACGCACGGTaGCTAAGAGCACTGGCGGCGGCCGCAGCAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RGQPPHRPDNAR*LRALAAAAAGL Trigger: CAAGCCTGCTGCGGCCGCCGCCAGTGCTCTTAGCCACCGTGCGTTATCTGGCCGGTGAGGTGGCTGGCCGCG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 72 bp | GGACAGACTCGAGCCCCAGTCTGGCCAAACGCAGCCTaGCGCGGCTTTCTCGATTTGCCGCTCCCGCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GQTRAPVWPNAA*RGFLDLPLPRP Trigger: AGGCCGCGGGAGCGGCAAATCGAGAAAGCCGCGGCAGGCTGCGTTTGGCCAGACTGGGGCTCGAGTCTGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CAA 90 bp | CGCTCGGCGGCCGGGCACATGTCTGGGCACAGGCCCATGGGTAGTTaGCAGCCGGACATGGTAGGGGTGTGGGTAGAGGACGCACACTCA | + |
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Preference number: 6 (lower is better) Translates to: RSAAGHMSGHRPMGS*QPDMVGVWVEDAHS Trigger: TGAGTGTGCGTCCTCTACCCACACCCCTACCATGTCCGGCTGCAAACTACCCATGGGCCTGTGCCCAGACATGTGCCCGGCCGCCGAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 72 bp | GAGTGCTCAGGGCACGGGACAGGCGGGCTAGAGCTTTaGGGCGGGCATACCCAATGTGTTCCTGCACTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ECSGHGTGGLEL*GGHTQCVPALR Trigger: GCGCAGTGCAGGAACACATTGGGTATGCCCGCCGCAAAGCTCTAGCCCGCCTGTCCCGTGCCCTGAGCACTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 72 bp | TGCCGTGGGCTCGAGGGACAGACTCGAGCCCCAGTCTaGCCAAACGCAGCCTGCCGCGGCTTTCTCGATTTG | + |
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Preference number: 6 (lower is better) Translates to: CRGLEGQTRAPV*PNAACRGFLDL Trigger: CAAATCGAGAAAGCCGCGGCAGGCTGCGTTTGGCCAGACTGGGGCTCGAGTCTGTCCCTCGAGCCCACGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CAA 72 bp | GGAGTGCTCAGGGCACGGGACAGGCGGGCTAGAGCTTaGCGGCGGGCATACCCAATGTGTTCCTGCACTGCG | + |
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Preference number: 6 (lower is better) Translates to: GVLRARDRRARA*RRAYPMCSCTA Trigger: CGCAGTGCAGGAACACATTGGGTATGCCCGCCGCAAAGCTCTAGCCCGCCTGTCCCGTGCCCTGAGCACTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CAA 72 bp | GTCTGGCCAAACGCAGCCTGCCGCGGCTTTCTCGATTaGCCGCTCCCGCGGCCTTTAGAAACGCCTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: VWPNAACRGFLD*PLPRPLETPPI Trigger: TATGGGAGGCGTTTCTAAAGGCCGCGGGAGCGGCAAATCGAGAAAGCCGCGGCAGGCTGCGTTTGGCCAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 72 bp | ATCCAAGGTCAGTCCATGGGCCTGGCACAGGTCCCGTaGTTCCTGGAGTCCATCCAGGGCCAGAAAGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: IQGQSMGLAQVP*FLESIQGQKVF Trigger: GAACACTTTCTGGCCCTGGATGGACTCCAGGAAGCACGGGACCTGTGCCAGGCCCATGGACTGACCTTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CCA 72 bp | GTCAGTCCATGGGCCTGGCACAGGTCCCGTGCTTCCTaGAGTCCATCCAGGGCCAGAAAGTGTTCTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: VSPWAWHRSRAS*SPSRARKCSMK Trigger: CTTCATAGAACACTTTCTGGCCCTGGATGGACTCCAGGAAGCACGGGACCTGTGCCAGGCCCATGGACTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS GCA 72 bp | GTTCCTGCACTGCGCAGCTCTGTAGGTAGGGTAAGGTaGGAAGCAGGCGAAACAGTCGGGCATGGTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VPALRSSVGRVR*EAGETVGHGCL Trigger: AAGACAACCATGCCCGACTGTTTCGCCTGCTTCGCACCTTACCCTACCTACAGAGCTGCGCAGTGCAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS TCA 72 bp | CAGAGCCAGGTCTGTGAATGTCACCTTCCTCAGCCATaGCCACATCTTCCAGGGTGTGTCCCTGCAACTTAT | + |
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Preference number: 6 (lower is better) Translates to: QSQVCECHLPQP*PHLPGCVPATY Trigger: ATAAGTTGCAGGGACACACCCTGGAAGATGTGGTCATGGCTGAGGAAGGTGACATTCACAGACCTGGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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| CDS CAA 72 bp | GTAGGCACCAGGGGGTGGGAGTCCTTCCTCAGAGTATaGACCCCTCAGGAATACAACTCTGTCTTTATCCAA | + |
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Preference number: 6 (lower is better) Translates to: VGTRGWESFLRV*TPQEYNSVFIQ Trigger: TTGGATAAAGACAGAGTTGTATTCCTGAGGGGTCAATACTCTGAGGAAGGACTCCCACCCCCTGGTGCCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113533.3 |
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