Pregenerated sensors for SAAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006763Ensembl transcript IDs: ENSMUST00000143082.4
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTAGCGCTCTCAGCTCCTTCTCCAGCCTTACGGTGCCTGCACCCTaGCATGCTTCCCTCCAGGATAATGAACCTGGAAGCCAGGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: CSALSSFSSLTVPAP*HASLQDNEPGSQAQ Trigger: CTGGGCCTGGCTTCCAGGTTCATTATCCTGGAGGGAAGCATGGCAGGGTGCAGGCACCGTAAGGCTGGAGAAGGAGCTGAGAGCGCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 90 bp | GCAAATCAAGATGTAGCGCTCTCAGCTCCTTCTCCAGCCTTACGGTaGCTGCACCCTGCCATGCTTCCCTCCAGGATAATGAACCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: ANQDVALSAPSPALR*LHPAMLPSRIMNLE Trigger: TTCCAGGTTCATTATCCTGGAGGGAAGCATGGCAGGGTGCAGGCACCGTAAGGCTGGAGAAGGAGCTGAGAGCGCTACATCTTGATTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 90 bp | AGAGGAGGTCAGGGAAGGCTGGCAGAACTTCCTAGAGCGCCTCTTTaGCTCTTTTGTTTCACCCCTGAATGTGGATGGAAGACACAGCGC | + |
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Preference number: 1 (lower is better) Translates to: RGGQGRLAELPRAPL*LFCFTPECGWKTQR Trigger: GCGCTGTGTCTTCCATCCACATTCAGGGGTGAAACAAAAGAGGCAAAGAGGCGCTCTAGGAAGTTCTGCCAGCCTTCCCTGACCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 90 bp | CTGAACGCCAGTGTCTGTCTCTCTTCCGTCTGTGAAACAGGAAAGTaGAAGTGGAACCACGGCACAGGAAGTACTGCTTCCAGGTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: LNASVCLSSVCETGK*KWNHGTGSTASRLL Trigger: TAACAACCTGGAAGCAGTACTTCCTGTGCCGTGGTTCCACTTGCACTTTCCTGTTTCACAGACGGAAGAGAGACAGACACTGGCGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR CCA 90 bp | GCCAGTGTCTGTCTCTCTTCCGTCTGTGAAACAGGAAAGTGCAAGTaGAACCACGGCACAGGAAGTACTGCTTCCAGGTTGTTACTGACA | + |
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Preference number: 1 (lower is better) Translates to: ASVCLSSVCETGKCK*NHGTGSTASRLLLT Trigger: TGTCAGTAACAACCTGGAAGCAGTACTTCCTGTGCCGTGGTTCCACTTGCACTTTCCTGTTTCACAGACGGAAGAGAGACAGACACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR TCA 90 bp | TGGCATACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTaGAGATGTACCGAGCGCCAGATACAGGCTAGTTCTCCATGTCTG | + |
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Preference number: 1 (lower is better) Translates to: WHTHSSTLQRENAAR*RCTERQIQASSPCL Trigger: CAGACATGGAGAACTAGCCTGTATCTGGCGCTCGGTACATCTTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR CCA 90 bp | AATAGTAAGGGGCCAGCCAGAATCAAGAAGCAGGAAACAGCATGTTaGCCCTTACGCCACACCCTTTTTCCTCTCCCTCTAGAACTTGTC | + |
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Preference number: 1 (lower is better) Translates to: NSKGPARIKKQETAC*PLRHTLFPLPLELV Trigger: GACAAGTTCTAGAGGGAGAGGAAAAAGGGTGTGGCGTAAGGGCCAACATGCTGTTTCCTGCTTCTTGATTCTGGCTGGCCCCTTACTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR TCA 90 bp | AAGTGGGAGGAGACGGGCATCAGGGCAGACTACGAAATCAAGGTCTaGTACAATGTTCATTCACACCATCATCCCGATGCCAACTTCGAA | + |
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Preference number: 1 (lower is better) Translates to: KWEETGIRADYEIKV*YNVHSHHHPDANFE Trigger: TTCGAAGTTGGCATCGGGATGATGGTGTGAATGAACATTGTATCAGACCTTGATTTCGTAGTCTGCCCTGATGCCCGTCTCCTCCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR TCA 90 bp | GTAACTGAGAATCTCTTTAAACGAGAAAGAATTCTGGTTGGTGTGTaGAGTAATGCAGACTGGATGCTAAGTGCCTGGATGGTTCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VTENLFKRERILVGV*SNADWMLSAWMVPG Trigger: TCCTGGAACCATCCAGGCACTTAGCATCCAGTCTGCATTACTTCACACACCAACCAGAATTCTTTCTCGTTTAAAGAGATTCTCAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 90 bp | TGTGTTCTCAAAGTGTGTTCTCATAAAAGCAACATGAAACATGCATaGACAACGGTAAGCAAAAGCAAGAGATCCAAGTGCTATTCCGTG | + |
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Preference number: 1 (lower is better) Translates to: CVLKVCSHKSNMKHA*TTVSKSKRSKCYSV Trigger: CACGGAATAGCACTTGGATCTCTTGCTTTTGCTTACCGTTGTGCATGCATGTTTCATGTTGCTTTTATGAGAACACACTTTGAGAACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 90 bp | CGAAATCAAGGTCTGATACAATGTTCATTCACACCATCATCCCGATaGCAACTTCGAACCATAGAAAACACAAAGTTTATTCCTTGGACA | + |
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Preference number: 1 (lower is better) Translates to: RNQGLIQCSFTPSSR*QLRTIENTKFIPWT Trigger: TGTCCAAGGAATAAACTTTGTGTTTTCTATGGTTCGAAGTTGGCATCGGGATGATGGTGTGAATGAACATTGTATCAGACCTTGATTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 90 bp | TCAGATTCCTTAGAAACTGGACTGAAATTCAGGTATTTACACGTGTaGAGGTTTGCTAACTCTTGTTCTTCTTTTAAGTTCTCTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SDSLETGLKFRYLHV*RFANSCSSFKFSPS Trigger: GGAGGGAGAGAACTTAAAAGAAGAACAAGAGTTAGCAAACCTGCACACGTGTAAATACCTGAATTTCAGTCCAGTTTCTAAGGAATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTTCTCCAGCCTTACGGTGCCTGCACCCTGCCATGCTTCCCTCCAGGATATGGTACAAACACAAGTaGGAGGAGACGGGCATCAGG | + |
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Preference number: 2 (lower is better) Translates to: APSPALRCLHPAMLPSRIWYKHK*EETGIR Trigger: CCTGATGCCCGTCTCCTCCCACTTGTGTTTGTACCA...TATCCTGGAGGGAAGCATGGCAGGGTGCAGGCACCGTAAGGCTGGAGAAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAGCTAGCACACCTGAGGCTCAGAGCAGCTACTGTATGCTAGCAGGCTGGGAGCTTTGCCCAGTGTaGCTTCTGCTGCCTGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LRASTPEAQSSYCMLAGWELCPV*LLLPAN Trigger: ATTTGCAGGCAGCAGAAGGCACACTGGGCAAAGCTC...CCAGCCTGCTAGCATACAGTAGCTGCTCTGAGCCTCAGGTGTGCTAGCTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR CAA 90 bp | GATGTGTGGCCTTATTGGAGTAAGTGTCACTGTAGGGGGCAGGCTTaGAGGTCTCCTAGGCTAGAGCTTTGCCCAGTGTGCCTTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: DVWPYWSKCHCRGQA*RSPRLELCPVCLLL Trigger: CAGCAGAAGGCACACTGGGCAAAGCTCTAGCCTAGGAGACCTCAAAGCCTGCCCCCTACAGTGACACTTACTCCAATAAGGCCACACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR TCA 90 bp | ACGCCACACCCTTTTTCCTCTCCCTCTAGAACTTGTCCTCTGAGGGGCAGCCTCAAGCAAATCATGTTCTaGAGCACAACTGCCGACTCA | + |
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Preference number: 2 (lower is better) Translates to: TPHPFSSPSRTCPLRGSLKQIMF*STTADS Trigger: TGAGTCGGCAGTTGTGCTTCAGAACATGATTTGCTT...GAGGCTGCCCCTCAGAGGACAAGTTCTAGAGGGAGAGGAAAAAGGGTGTGGCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | GACATGCTAACAGGGGAGAACATAGGCAGCTCAGAGACAGGTACATGGATAGGCACACCTTCCCTCTTATaGAGAGTGAGCAGGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: DMLTGENIGSSETGTWIGTPSLL*RVSRTW Trigger: CCAGGTCCTGCTCACTCTCCATAAGAGGGAAGGTGT...GCCTATCCATGTACCTGTCTCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR TCA 90 bp | ACATCACTTCCTTTCTCAGTCAGACATGCTAACAGGGGAGAACATAGGCAGCTCGAAAATGCTGCTCGCTaGAGATGTACCGAGCGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TSLPFSVRHANRGEHRQLENAAR*RCTERQ Trigger: CTGGCGCTCGGTACATCTTCAGCGAGCAGCATTTTC...GAGCTGCCTATGTTCTCCCCTGTTAGCATGTCTGACTGAGAAAGGAAGTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | CTTTTAAGTTCTCTCCCTCCCGCACCTGCATGTAGCACAGGATGCATGTGCCCATGTGAAACAGGAAAGTaGAAGTGGAACCACGGCACA | + |
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Preference number: 2 (lower is better) Translates to: LLSSLPPAPACSTGCMCPCETGK*KWNHGT Trigger: TGTGCCGTGGTTCCACTTGCACTTTCCTGTTTCACA...TGGGCACATGCATCCTGTGCTACATGCAGGTGCGGGAGGGAGAGAACTTAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | GACATGCTAACAGGGGAGAACATAGGCAGCTCAGAGACAGGTACATGGATAGGCTGGATGCTAAGTGCCTaGATGGTTCCAGGAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: DMLTGENIGSSETGTWIGWMLSA*MVPGMS Trigger: AGACATTCCTGGAACCATCCAGGCACTTAGCATCCA...GCCTATCCATGTACCTGTCTCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTACCTGGTTTCCTTTTGCTGAACCGTCTGACAGTTTAGCCCTCTGTCAGCCAGGAGAGTGGAGTTaGACCTCAGCTCTCAGATAC | + |
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Preference number: 2 (lower is better) Translates to: MSTWFPFAEPSDSLALCQPGEWS*TSALRY Trigger: GTATCTGAGAGCTGAGGTCCAACTCCACTCTCCTGG...CTGACAGAGGGCTAAACTGTCAGACGGTTCAGCAAAAGGAAACCAGGTAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR TCA 90 bp | GACATGCTAACAGGGGAGAACATAGGCAGCTCAGAGACAGGTACATGGATAGGCCTTCCTTTGCTTCAGTaGTTTCTTCGCTGGCATACA | + |
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Preference number: 2 (lower is better) Translates to: DMLTGENIGSSETGTWIGLPLLQ*FLRWHT Trigger: TGTATGCCAGCGAAGAAATCACTGAAGCAAAGGAAG...GCCTATCCATGTACCTGTCTCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | TTCGCTGGCATACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTGAACCTAGAGCGCCTCTTTaGCTCTTTTGTTTCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: FAGIHTAQLYREKMLLAEPRAPL*LFCFTP Trigger: AGGGGTGAAACAAAAGAGGCAAAGAGGCGCTCTAGG...TTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTATGCCAGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | TACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTGAAGATGTACCGAGTGCCTTCTGCTGCCTaGAAATCAAGATGTAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: YTQLNSTERKCCSLKMYRVPSAA*KSRCSA Trigger: AGCGCTACATCTTGATTTGCAGGCAGCAGAAGGCAC...TCGGTACATCTTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | TCACTTCCTTTCTCAGTCAGACATGCTAACAGGGGAGAACATAGGCAGCTCAGACCCAGGTTCATGTTTTaGTTACAGAGTGCCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SLPFSVRHANRGEHRQLRPRFMF*LQSASL Trigger: AAGGCTGGCACTCTGTAAGCAAAACATGAACCTGGG...TCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTCTGACTGAGAAAGGAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | TCACTTCCTTTCTCAGTCAGACATGCTAACAGGGGAGAACATAGGCAGCTCAGATGTATGCTAGCAGGCTaGCTCTCCAAGCCTAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: SLPFSVRHANRGEHRQLRCMLAG*LSKPKL Trigger: TAACTTAGGCTTGGAGAGCCAGCCTGCTAGCATACA...TCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTCTGACTGAGAAAGGAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | CCACGGCACAGGAAGTACTGCTTCCAGGTTGTTACTGACAATCTGGAGGAGTCCGTCTGCACTTGTCTCTaGATATATTGTATGAAATAC | + |
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Preference number: 2 (lower is better) Translates to: PRHRKYCFQVVTDNLEESVCTCL*IYCMKY Trigger: GTATTTCATACAATATATGCAGAGACAAGTGCAGAC...GGACTCCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACTTCCTGTGCCGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | ACATCACTTCCTTTCTCAGTCAGACATGCTAACAGGGGAGAACATAGGCAGCTCTGGGGGAAACTGGAATaGGTTTATAAAGCTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: TSLPFSVRHANRGEHRQLWGKLE*VYKAGF Trigger: AAAGCCAGCTTTATAAACCCATTCCAGTTTCCCCCA...GAGCTGCCTATGTTCTCCCCTGTTAGCATGTCTGACTGAGAAAGGAAGTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | ACATCACTTCCTTTCTCAGTCAGACATGCTAACAGGGGAGAACATAGGCAGCTCCTCCATGTCTGCAGATaGTTTCTGCATGTACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: TSLPFSVRHANRGEHRQLLHVCR*FLHVLH Trigger: ATGAAGTACATGCAGAAACCATCTGCAGACATGGAG...GAGCTGCCTATGTTCTCCCCTGTTAGCATGTCTGACTGAGAAAGGAAGTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | CACTTGTCTCTGCATATATTGTATGAAATACACAAGGATACTGGAGGAAGCTACGCCCAGTGTGCCTTCTaGTGCCTGCAAATCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: HLSLHILYEIHKDTGGSYAQCAF*CLQIKM Trigger: CATCTTGATTTGCAGGCAGCAGAAGGCACACTGGGC...GTAGCTTCCTCCAGTATCCTTGTGTATTTCATACAATATATGCAGAGACAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | GACATGCTAACAGGGGAGAACATAGGCAGCTCAGAGACAGGTACATGGATAGGCCTCAGGATGTTTTCATaGATATCAAACCAATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: DMLTGENIGSSETGTWIGLRMFS*ISNQCE Trigger: TTCACATTGGTTTGATATGCATGAAAACATCCTGAG...GCCTATCCATGTACCTGTCTCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | TACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTGAAGATGTACCGAGATTCTGGGGGAAACTaGAATGGGTTTATAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: YTQLNSTERKCCSLKMYRDSGGN*NGFIKL Trigger: CAGCTTTATAAACCCATTCCAGTTTCCCCCAGAATC...TCGGTACATCTTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | AAATTCAGGTATTTACACGTGTGCAGGTTTGCTAACTCTTGTTCTTCTTTTAAGCCTAGGCTAGAGCTTTaGCCAGTGTGCCTTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KFRYLHVCRFANSCSSFKPRLEL*PVCLLL Trigger: CAGCAGAAGGCACACTGGGCAAAGCTCTAGCCTAGG...CTTAAAAGAAGAACAAGAGTTAGCAAACCTGCACACGTGTAAATACCTGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTGCTGAACCGTCTGACAGTTTAGCCCTCTGTCAGTATGAAACTTCCCTTTACGAAATCAAGGTCTaGTACAATGTTCATTCACAC | + |
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Preference number: 2 (lower is better) Translates to: PFAEPSDSLALCQYETSLYEIKV*YNVHSH Trigger: GTGTGAATGAACATTGTATCAGACCTTGATTTCGTA...AAGGGAAGTTTCATACTGACAGAGGGCTAAACTGTCAGACGGTTCAGCAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGAAAAACAGAACCAACAGAGTAAATAGTAAGGGGCCAGCCAGAATCAAGAACATGAAACATGCATaGACAACGGTAAGCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CLKNRTNRVNSKGPARIKNMKHA*TTVSKS Trigger: GCTTTTGCTTACCGTTGTGCATGCATGTTTCATGTT...CTTGATTCTGGCTGGCCCCTTACTATTTACTCTGTTGGTTCTGTTTTTCAGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTGCTGAACCGTCTGACAGTTTAGCCCTCTGTCAGTATGAAACTTCCCTTTGGAAAAAGAACCTTTaGTCTGACAAATATGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PFAEPSDSLALCQYETSLWKKNL*SDKYGD Trigger: ATCACCATATTTGTCAGAGCAAAGGTTCTTTTTCCA...AAGGGAAGTTTCATACTGACAGAGGGCTAAACTGTCAGACGGTTCAGCAAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | AAATTCAGGTATTTACACGTGTGCAGGTTTGCTAACTCTTGTTCTTCTTTTAAGAGACGAGAGAGGCTGTaGCAGTCCCTCATCTTACTT | + |
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Preference number: 2 (lower is better) Translates to: KFRYLHVCRFANSCSSFKRRERL*QSLILL Trigger: AAGTAAGATGAGGGACTGCCACAGCCTCTCTCGTCT...CTTAAAAGAAGAACAAGAGTTAGCAAACCTGCACACGTGTAAATACCTGAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | AAATTCAGGTATTTACACGTGTGCAGGTTTGCTAACTCTTGTTCTTCTTTTAAGCAAGCATCAGTAACATaGGCTCAATGCAGAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KFRYLHVCRFANSCSSFKQASVT*AQCRGE Trigger: CTCTCCTCTGCATTGAGCGCATGTTACTGATGCTTG...CTTAAAAGAAGAACAAGAGTTAGCAAACCTGCACACGTGTAAATACCTGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR GCA 90 bp | AAATTCAGGTATTTACACGTGTGCAGGTTTGCTAACTCTTGTTCTTCTTTTAAGAGACTGGATGCTAAGTaGCTGGATGGTTCCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: KFRYLHVCRFANSCSSFKRLDAK*LDGSRN Trigger: ATTCCTGGAACCATCCAGGCACTTAGCATCCAGTCT...CTTAAAAGAAGAACAAGAGTTAGCAAACCTGCACACGTGTAAATACCTGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR-3UTR CCA 90 bp | GACAACCTTACAACTCAATATTGGAAAAAGAACCTTTGCTCTGACAAATATGGTACAAAGTTTATTCCTTaGACAGCAGAAGCTCCAACT | + |
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Preference number: 2 (lower is better) Translates to: DNLTTQYWKKNLCSDKYGTKFIP*TAEAPT Trigger: AGTTGGAGCTTCTGCTGTCCAAGGAATAAACTTTGT...ACCATATTTGTCAGAGCAAAGGTTCTTTTTCCAATATTGAGTTGTAAGGTTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 72 bp | CTCAGCTCCTTCTCCAGCCTTACGGTGCCTGCACCCTaGCATGCTTCCCTCCAGGATAATGAACCTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: LSSFSSLTVPAP*HASLQDNEPGS Trigger: GCTTCCAGGTTCATTATCCTGGAGGGAAGCATGGCAGGGTGCAGGCACCGTAAGGCTGGAGAAGGAGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 72 bp | GATGTAGCGCTCTCAGCTCCTTCTCCAGCCTTACGGTaGCTGCACCCTGCCATGCTTCCCTCCAGGATAATG | + |
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Preference number: 3 (lower is better) Translates to: DVALSAPSPALR*LHPAMLPSRIM Trigger: CATTATCCTGGAGGGAAGCATGGCAGGGTGCAGGCACCGTAAGGCTGGAGAAGGAGCTGAGAGCGCTACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 72 bp | AGGGGGCAGGCTTTGAGGTCTCCTAGGCTAGAGCTTTaGCCAGTGTGCCTTCTGCTGCCTGCAAATCAAGAT | + |
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Preference number: 3 (lower is better) Translates to: RGQALRSPRLEL*PVCLLLPANQD Trigger: ATCTTGATTTGCAGGCAGCAGAAGGCACACTGGGCAAAGCTCTAGCCTAGGAGACCTCAAAGCCTGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 72 bp | AGTTCTCTCCCTCCCGCACCTGCATGTAGCACAGGATaGATGTGCCCACGAACTCCCCAGGTTCATGTTTTG | + |
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Preference number: 3 (lower is better) Translates to: SSLPPAPACSTG*MCPRTPQVHVL Trigger: CAAAACATGAACCTGGGGAGTTCGTGGGCACATGCATCCTGTGCTACATGCAGGTGCGGGAGGGAGAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR CCA 72 bp | CTGGATGGTTCCAGGAATGTCTTCATCAAGAAGCACTaGGGACAGCGAGGAAGCACCAGGGAGTCACAGACG | + |
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Preference number: 3 (lower is better) Translates to: LDGSRNVFIKKH*GQRGSTRESQT Trigger: CGTCTGTGACTCCCTGGTGCTTCCTCGCTGTCCCCAGTGCTTCTTGATGAAGACATTCCTGGAACCATCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR GCA 72 bp | GCTTTGAGGTCTCCTAGGCTAGAGCTTTGCCCAGTGTaGCTTCTGCTGCCTGCAAATCAAGATGTAGCGCTC | + |
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Preference number: 3 (lower is better) Translates to: ALRSPRLELCPV*LLLPANQDVAL Trigger: GAGCGCTACATCTTGATTTGCAGGCAGCAGAAGGCACACTGGGCAAAGCTCTAGCCTAGGAGACCTCAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| 3UTR CCA 72 bp | CCTGAGGCTCAGAGCAGCTACTGTATGCTAGCAGGCTaGCTCTCCAAGCCTAAGTTAGTTACACCTTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PEAQSSYCMLAG*LSKPKLVTPSL Trigger: GAGGGAAGGTGTAACTAACTTAGGCTTGGAGAGCCAGCCTGCTAGCATACAGTAGCTGCTCTGAGCCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CCA 72 bp | GGGCCAGCCAGAATCAAGAAGCAGGAAACAGCATGTTaGCCCTTACGCCACACCCTTTTTCCTCTCCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GPARIKKQETAC*PLRHTLFPLPL Trigger: TAGAGGGAGAGGAAAAAGGGTGTGGCGTAAGGGCCAACATGCTGTTTCCTGCTTCTTGATTCTGGCTGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR TCA 72 bp | ACCACGGCACAGGAAGTACTGCTTCCAGGTTGTTACTaGCAATCTGGAGGAGTCCACACAGCTGATGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TTAQEVLLPGCY*QSGGVHTADAE Trigger: CTCAGCATCAGCTGTGTGGACTCCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACTTCCTGTGCCGTGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | CAGGGAAGGCTGGCAGAACTTCCTAGAGCGCCTCTTTaGCTCTTTTGTTTCACCCCTGAATGTGGATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QGRLAELPRAPL*LFCFTPECGWK Trigger: CTTCCATCCACATTCAGGGGTGAAACAAAAGAGGCAAAGAGGCGCTCTAGGAAGTTCTGCCAGCCTTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | GATGCATGTGCCCACGAACTCCCCAGGTTCATGTTTTaGTTACAGAGTGCCAGCCTTAAAGATGGCCGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: DACAHELPRFMF*LQSASLKDGRS Trigger: ACTGCGGCCATCTTTAAGGCTGGCACTCTGTAAGCAAAACATGAACCTGGGGAGTTCGTGGGCACATGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCTGGCATACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTGAATGTAGGGGGCAGGCTTaGAGGTCTCCTAGGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FAGIHTAQLYREKMLLAECRGQA*RSPRLE Trigger: CTCTAGCCTAGGAGACCTCAAAGCCTGCCCCCTACA...TTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTATGCCAGCGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR-3UTR CAA 90 bp | GACATGCTAACAGGGGAGAACATAGGCAGCTCAGAGACAGGTACATGGATAGGCCCATGGCTACTAGTGTaGTATAGTGATGAGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DMLTGENIGSSETGTWIGPWLLV*YSDEGQ Trigger: CTGCCCCTCATCACTATACAACACTAGTAGCCATGG...GCCTATCCATGTACCTGTCTCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | AGTGTCTGTCTCTCTTCCGTCTGTGAAACAGGAAAGTaGAAGTGGAACCACGGCACAGGAAGTACTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SVCLSSVCETGK*KWNHGTGSTAS Trigger: GGAAGCAGTACTTCCTGTGCCGTGGTTCCACTTGCACTTTCCTGTTTCACAGACGGAAGAGAGACAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | GCATACACACAGCTCAACTCTACAGAGAGAAAATGCTaGTCGCTGAAGATGTACCGAGCGCCAGATACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AYTQLNSTERKC*SLKMYRAPDTG Trigger: GCCTGTATCTGGCGCTCGGTACATCTTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CCA 72 bp | TGTCTCTCTTCCGTCTGTGAAACAGGAAAGTGCAAGTaGAACCACGGCACAGGAAGTACTGCTTCCAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLSSVCETGKCK*NHGTGSTASRL Trigger: CAACCTGGAAGCAGTACTTCCTGTGCCGTGGTTCCACTTGCACTTTCCTGTTTCACAGACGGAAGAGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CCA 72 bp | GAGGAAGCACCAGGGAGTCACAGACGAGAGAGGCTGTaGCAGTCCCTCATCTTACTTAAAATCTTCTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EEAPGSHRRERL*QSLILLKIFSS Trigger: GCTTGAGAAGATTTTAAGTAAGATGAGGGACTGCCACAGCCTCTCTCGTCTGTGACTCCCTGGTGCTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTAAGTTCTCTCCCTCCCGCACCTGCATGTAGCACAGGATGCATGTGCCCATGGTGTGTTACTTCCTaGAATCACAGAGCACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLSSLPPAPACSTGCMCPWCVTS*NHRALK Trigger: CTTGAGTGCTCTGTGATTCAAGGAAGTAACACACCA...TGGGCACATGCATCCTGTGCTACATGCAGGTGCGGGAGGGAGAGAACTTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR-3UTR CAA 90 bp | TACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTGAAGATGTACCGACCCAGGAGAGTGGAGTaGGACCTCAGCTCTCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: YTQLNSTERKCCSLKMYRPRRVE*DLSSQI Trigger: TATCTGAGAGCTGAGGTCCAACTCCACTCTCCTGGG...TCGGTACATCTTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR TCA 72 bp | GAGACGGGCATCAGGGCAGACTACGAAATCAAGGTCTaGTACAATGTTCATTCACACCATCATCCCGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: ETGIRADYEIKV*YNVHSHHHPDA Trigger: GGCATCGGGATGATGGTGTGAATGAACATTGTATCAGACCTTGATTTCGTAGTCTGCCCTGATGCCCGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | CTGGCATACACACAGCTCAACTCTACAGAGAGAAAATaGTGCTCGCTGAAGATGTACCGAGCGCCAGATACA | + |
|
Preference number: 3 (lower is better) Translates to: LAYTQLNSTERK*CSLKMYRAPDT Trigger: TGTATCTGGCGCTCGGTACATCTTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTATGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CCA 72 bp | TTAAAAAGCCCTCCAGAGCTGACCCATGACTACCCATaGCTACTAGTGTTGTATAGTGATGAGGGGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LKSPPELTHDYP*LLVLYSDEGQA Trigger: AGCCTGCCCCTCATCACTATACAACACTAGTAGCCATGGGTAGTCATGGGTCAGCTCTGGAGGGCTTTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | GTACCGAGCGCCAGATACAGGCTAGTTCTCCATGTCTaGAGATGGTTTCTGCATGTACTTCATCAGAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VPSARYRLVLHV*RWFLHVLHQKC Trigger: ACACTTCTGATGAAGTACATGCAGAAACCATCTGCAGACATGGAGAACTAGCCTGTATCTGGCGCTCGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTAAGTTCTCTCCCTCCCGCACCTGCATGTAGCACAGGATGCATGTGCCCACCTTACAACTCAATATaGGAAAAAGAACCTTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLSSLPPAPACSTGCMCPPYNSI*EKEPLL Trigger: GAGCAAAGGTTCTTTTTCCAATATTGAGTTGTAAGG...TGGGCACATGCATCCTGTGCTACATGCAGGTGCGGGAGGGAGAGAACTTAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | AAGGAGGCAGACGGTTCCCCGGTCTGCACTTGTCTCTaGATATATTGTATGAAATACACAAGGATACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KEADGSPVCTCL*IYCMKYTRILE Trigger: CTCCAGTATCCTTGTGTATTTCATACAATATATGCAGAGACAAGTGCAGACCGGGGAACCGTCTGCCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CCA 72 bp | CTCTCCAAGCCTAAGTTAGTTACACCTTCCCTCTTATaGAGAGTGAGCAGGACCTGGACTTTAGATACAACG | + |
|
Preference number: 3 (lower is better) Translates to: LSKPKLVTPSLL*RVSRTWTLDTT Trigger: CGTTGTATCTAAAGTCCAGGTCCTGCTCACTCTCCATAAGAGGGAAGGTGTAACTAACTTAGGCTTGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR-3UTR CAA 90 bp | TACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTGAAGATGTACCGACACAAAGTTTATTCCTaGGACAGCAGAAGCTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YTQLNSTERKCCSLKMYRHKVYS*DSRSSN Trigger: GTTGGAGCTTCTGCTGTCCAAGGAATAAACTTTGTG...TCGGTACATCTTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGAAAAACAGAACCAACAGAGTAAATAGTAAGGGGCCAGCCAGAATCAAGAGTACTGCTTCCAGGTaGTTACTGACAATCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CLKNRTNRVNSKGPARIKSTASR*LLTIWR Trigger: CCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACT...CTTGATTCTGGCTGGCCCCTTACTATTTACTCTGTTGGTTCTGTTTTTCAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | GTAAGCAAAAGCAAGAGATCCAAGTGCTATTCCGTGTaGAGCAGGCTTCATCTTCTACATGAGACAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: VSKSKRSKCYSV*SRLHLLHETTP Trigger: AGGTGTTGTCTCATGTAGAAGATGAAGCCTGCTGCACACGGAATAGCACTTGGATCTCTTGCTTTTGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CCA 72 bp | AGCGCCAGATACAGGCTAGTTCTCCATGTCTGCAGATaGTTTCTGCATGTACTTCATCAGAAGTGTATATGC | + |
|
Preference number: 3 (lower is better) Translates to: SARYRLVLHVCR*FLHVLHQKCIC Trigger: GCATATACACTTCTGATGAAGTACATGCAGAAACCATCTGCAGACATGGAGAACTAGCCTGTATCTGGCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR TCA 72 bp | AATCTCTTTAAACGAGAAAGAATTCTGGTTGGTGTGTaGAGTAATGCAGACTGGATGCTAAGTGCCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: NLFKRERILVGV*SNADWMLSAWM Trigger: CATCCAGGCACTTAGCATCCAGTCTGCATTACTTCACACACCAACCAGAATTCTTTCTCGTTTAAAGAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | AAAGTGTGTTCTCATAAAAGCAACATGAAACATGCATaGACAACGGTAAGCAAAAGCAAGAGATCCAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KVCSHKSNMKHA*TTVSKSKRSKC Trigger: GCACTTGGATCTCTTGCTTTTGCTTACCGTTGTGCATGCATGTTTCATGTTGCTTTTATGAGAACACACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR TCA 72 bp | ATGAAATACACAAGGATACTGGAGGAAGCTACCATATaGGGAGTTTCTGTCACTGCAACTAAATGTACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: MKYTRILEEATI*GVSVTATKCTC Trigger: ACAAGTACATTTAGTTGCAGTGACAGAAACTCCTCATATGGTAGCTTCCTCCAGTATCCTTGTGTATTTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CCA 72 bp | GTCTCTTCTTTTGAGATGATCAGATTCCTTAGAAACTaGACTGAAATTCAGGTATTTACACGTGTGCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSSFEMIRFLRN*TEIQVFTRVQV Trigger: AACCTGCACACGTGTAAATACCTGAATTTCAGTCCAGTTTCTAAGGAATCTGATCATCTCAAAAGAAGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR GCA 72 bp | TTAGAAACTGGACTGAAATTCAGGTATTTACACGTGTaGAGGTTTGCTAACTCTTGTTCTTCTTTTAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LETGLKFRYLHV*RFANSCSSFKF Trigger: GAACTTAAAAGAAGAACAAGAGTTAGCAAACCTGCACACGTGTAAATACCTGAATTTCAGTCCAGTTTCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CAA 72 bp | GGGGCCAGCCAGAATCAAGAAGCAGGAAACAGCATGTaGGCCCTTACGCCACACCCTTTTTCCTCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GASQNQEAGNSM*ALTPHPFSSPS Trigger: AGAGGGAGAGGAAAAAGGGTGTGGCGTAAGGGCCAACATGCTGTTTCCTGCTTCTTGATTCTGGCTGGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR TCA 90 bp | TCACTTCCTTTCTCAGTCAGACATGCTAACAGGGGAGAACATAGGCAGCTCAGAAGGGGCAGGAGGCTCTaGAAGGCGCAGGAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPFSVRHANRGEHRQLRRGRRL*KAQEHF Trigger: GAAGTGCTCCTGCGCCTTTCAGAGCCTCCTGCCCCT...TCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTCTGACTGAGAAAGGAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR GCA 90 bp | CTGAGAGCTAGCACACCTGAGGCTCAGAGCAGCTACTGTATGCTAGCAGGCTGGATGGAAAACACTGGCTaGTCTTCAGAGTCCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRASTPEAQSSYCMLAGWMENTG*SSESSW Trigger: CCACGAGGACTCTGAAGAGCAGCCAGTGTTTTCCAT...CCAGCCTGCTAGCATACAGTAGCTGCTCTGAGCCTCAGGTGTGCTAGCTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR CCA 90 bp | CCACGGCACAGGAAGTACTGCTTCCAGGTTGTTACTGACAATCTGGAGGAGTCCCAGAGCGCACTTGTTTaGCAGCTTCCAGCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRHRKYCFQVVTDNLEESQSALV*QLPAHR Trigger: CCTGTGTGCTGGAAGCTGCCAAACAAGTGCGCTCTG...GGACTCCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACTTCCTGTGCCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CAA 72 bp | CCTTATTGGAGTAAGTGTCACTGTAGGGGGCAGGCTTaGAGGTCTCCTAGGCTAGAGCTTTGCCCAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PYWSKCHCRGQA*RSPRLELCPVC Trigger: GCACACTGGGCAAAGCTCTAGCCTAGGAGACCTCAAAGCCTGCCCCCTACAGTGACACTTACTCCAATAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR TCA 90 bp | CCACGGCACAGGAAGTACTGCTTCCAGGTTGTTACTGACAATCTGGAGGAGTCCCCCTCCTTCAGTCCCTaGGCCACCTTTTCCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRHRKYCFQVVTDNLEESPSFSP*ATFSFV Trigger: AACAAAGGAAAAGGTGGCTCAGGGACTGAAGGAGGG...GGACTCCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACTTCCTGTGCCGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR GCA 90 bp | CACAGGAAGTACTGCTTCCAGGTTGTTACTGACAATCTGGAGGAGTCCACACAGCGAAGAGCCAGTGCTTaGTGTAGACCGTGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HRKYCFQVVTDNLEESTQRRASA*CRPCSR Trigger: TCGGGAGCACGGTCTACAGCAAGCACTGGCTCTTCG...CTGTGTGGACTCCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACTTCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR GCA 90 bp | CACAGGAAGTACTGCTTCCAGGTTGTTACTGACAATCTGGAGGAGTCCACACAGGCGCAGGAGCACTTCTaGTTGCTTAACTGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRKYCFQVVTDNLEESTQAQEHF*LLNWPS Trigger: GGAGGGCCAGTTAAGCAAGCAGAAGTGCTCCTGCGC...CTGTGTGGACTCCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACTTCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGCTAGCACACCTGAGGCTCAGAGCAGCTACTGTATGCTAGCAGGCTGGTTCTGTATCAGACTCTaGGGGGTTCTCTGGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRASTPEAQSSYCMLAGWFCIRL*GVLWFL Trigger: AAGAAACCAGAGAACCCCTCAGAGTCTGATACAGAA...CCAGCCTGCTAGCATACAGTAGCTGCTCTGAGCCTCAGGTGTGCTAGCTCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR GCA 90 bp | GACATGCTAACAGGGGAGAACATAGGCAGCTCAGAGACAGGTACATGGATAGGCAGGAGCACTTCTGCTTaGTTAACTGGCCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DMLTGENIGSSETGTWIGRSTSA*LTGPPS Trigger: TGAAGGAGGGCCAGTTAAGCAAGCAGAAGTGCTCCT...GCCTATCCATGTACCTGTCTCTGAGCTGCCTATGTTCTCCCCTGTTAGCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR CCA 90 bp | CACAGGAAGTACTGCTTCCAGGTTGTTACTGACAATCTGGAGGAGTCCACACAGCTGGCCACTTCTGTCTaGGAAAGGCAAGTAAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRKYCFQVVTDNLEESTQLATSV*ERQVSN Trigger: GTTGCTTACTTGCCTTTCCCAGACAGAAGTGGCCAG...CTGTGTGGACTCCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACTTCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR CCA 90 bp | TACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTGAAGATGTACCGACCACATCCTCGTCCATaGACATATCCCAGACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTQLNSTERKCCSLKMYRPHPRP*TYPRLC Trigger: GCAGAGTCTGGGATATGTCCATGGACGAGGATGTGG...TCGGTACATCTTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR CCA 90 bp | CACAGGAAGTACTGCTTCCAGGTTGTTACTGACAATCTGGAGGAGTCCACACAGATATGGAAGTCGTCTTaGGTGGGACCACAGATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: HRKYCFQVVTDNLEESTQIWKSS*VGPQIV Trigger: TACGATCTGTGGTCCCACCCAAGACGACTTCCATAT...CTGTGTGGACTCCTCCAGATTGTCAGTAACAACCTGGAAGCAGTACTTCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGGAAGGCTGGCAGAACTTCCTAGAGCGCCTCTTTGCCTCTTTTGTTTCACATATCCCAGACTCTaGAAATCTCATTCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GQGRLAELPRAPLCLFCFTYPRL*KSHSPF Trigger: AAATGGAGAATGAGATTTGCAGAGTCTGGGATATGT...GAAACAAAAGAGGCAAAGAGGCGCTCTAGGAAGTTCTGCCAGCCTTCCCTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR CCA 90 bp | ATGTCTACCTGGTTTCCTTTTGCTGAACCGTCTGACAGTTTAGCCCTCTGTCAGTACAATGGAAAACACTaGCTGCTCTTCAGAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSTWFPFAEPSDSLALCQYNGKH*LLFRVL Trigger: GAGGACTCTGAAGAGCAGCCAGTGTTTTCCATTGTA...CTGACAGAGGGCTAAACTGTCAGACGGTTCAGCAAAAGGAAACCAGGTAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CAA 72 bp | ACAGGGAAAGGAGGCAGACGGTTCCCCGGTCTGCACTaGTCTCTGCATATATTGTATGAAATACACAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGKGGRRFPGLH*SLHILYEIHKD Trigger: ATCCTTGTGTATTTCATACAATATATGCAGAGACAAGTGCAGACCGGGGAACCGTCTGCCTCCTTTCCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CAA 72 bp | GCCTTAAAGATGGCCGCAGTGGATTCAAGTGCTGCATaGGTGTGTTACTTCCTTGAATCACAGAGCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALKMAAVDSSAA*VCYFLESQSTQ Trigger: TTGAGTGCTCTGTGATTCAAGGAAGTAACACACCAATGCAGCACTTGAATCCACTGCGGCCATCTTTAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR CCA 90 bp | AAATTCAGGTATTTACACGTGTGCAGGTTTGCTAACTCTTGTTCTTCTTTTAAGTCTTCAGAGTCCTCGTaGGGTTGGCCTGGAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KFRYLHVCRFANSCSSFKSSESS*GWPGSR Trigger: CCGGCTTCCAGGCCAACCCCACGAGGACTCTGAAGA...CTTAAAAGAAGAACAAGAGTTAGCAAACCTGCACACGTGTAAATACCTGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| CDS-3UTR CCA 90 bp | TGCCTGAAAAACAGAACCAACAGAGTAAATAGTAAGGGGCCAGCCAGAATCAAGGCACACAGGGTACAATaGAAAACACTGGCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLKNRTNRVNSKGPARIKAHRVQ*KTLAAL Trigger: AAGAGCAGCCAGTGTTTTCCATTGTACCCTGTGTGC...CTTGATTCTGGCTGGCCCCTTACTATTTACTCTGTTGGTTCTGTTTTTCAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
||
| 3UTR CAA 72 bp | AGACGGTTCCCCGGTCTGCACTTGTCTCTGCATATATaGTATGAAATACACAAGGATACTGGAGGAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRFPGLHLSLHI*YEIHKDTGGSY Trigger: GTAGCTTCCTCCAGTATCCTTGTGTATTTCATACAATATATGCAGAGACAAGTGCAGACCGGGGAACCGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS-3UTR GCA 90 bp | TGCCTGAAAAACAGAACCAACAGAGTAAATAGTAAGGGGCCAGCCAGAATCAAGTTCTTCAGCAAGATCTaGCTGTTCTTCCTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLKNRTNRVNSKGPARIKFFSKI*LFFLIS Trigger: GCTGATGAGGAAGAACAGGCAGATCTTGCTGAAGAA...CTTGATTCTGGCTGGCCCCTTACTATTTACTCTGTTGGTTCTGTTTTTCAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS-3UTR CCA 90 bp | AAATTCAGGTATTTACACGTGTGCAGGTTTGCTAACTCTTGTTCTTCTTTTAAGAAGTTTCCAGCAGGGTaGGTGGGTCTGAGTCACACA | + |
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Preference number: 4 (lower is better) Translates to: KFRYLHVCRFANSCSSFKKFPAG*VGLSHT Trigger: TGTGTGACTCAGACCCACCCACCCTGCTGGAAACTT...CTTAAAAGAAGAACAAGAGTTAGCAAACCTGCACACGTGTAAATACCTGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 90 bp | TGTTTGGCAGCTTCCAGCACACAGGGTACAATGGAAAACACTGGCTaGTCTTCAGAGTCCTCGTGGGGTTGGCCTGGAAGCCGGGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: CLAASSTQGTMENTG*SSESSWGWPGSRVA Trigger: GGCTACCCGGCTTCCAGGCCAACCCCACGAGGACTCTGAAGAGCAGCCAGTGTTTTCCATTGTACCCTGTGTGCTGGAAGCTGCCAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 90 bp | CGTAGAGGGGCAGGAGGCTCTGAAAGGCGCAGGAGCACTTCTGCTTaGTTAACTGGCCCTCCTTCAGTCCCTGAGCCACCTTTTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRGAGGSERRRSTSA*LTGPPSVPEPPFPL Trigger: CAAAGGAAAAGGTGGCTCAGGGACTGAAGGAGGGCCAGTTAAGCAAGCAGAAGTGCTCCTGCGCCTTTCAGAGCCTCCTGCCCCTCTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 90 bp | AAGAGCCTCATCGACCTCACGTACGACTTTAACGAAGTCTTCCACTaGAGGGCCGTAGAGGGGCAGGAGGCTCTGAAAGGCGCAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSLIDLTYDFNEVFH*RAVEGQEALKGAGA Trigger: TGCTCCTGCGCCTTTCAGAGCCTCCTGCCCCTCTACGGCCCTGCAGTGGAAGACTTCGTTAAAGTCGTACGTGAGGTCGATGAGGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 90 bp | TATCAGGACACTGCACGATGGCTTGCACGCCGTCATCCACCGTGGTaGGCAGCTGTAAGATGCGCATGTAAACATCCAGCCCCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YQDTARWLARRHPPW*AAVRCACKHPAPPG Trigger: ACCTGGAGGGGCTGGATGTTTACATGCGCATCTTACAGCTGCTCACCACGGTGGATGACGGCGTGCAAGCCATCGTGCAGTGTCCTGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 90 bp | CACTTGTTTGGCAGCTTCCAGCACACAGGGTACAATGGAAAACACTaGCTGCTCTTCAGAGTCCTCGTGGGGTTGGCCTGGAAGCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: HLFGSFQHTGYNGKH*LLFRVLVGLAWKPG Trigger: ACCCGGCTTCCAGGCCAACCCCACGAGGACTCTGAAGAGCAGCCAGTGTTTTCCATTGTACCCTGTGTGCTGGAAGCTGCCAAACAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 90 bp | CCCCTTCTTCTATCTTCAGGTGCTCCTGTTCGGCCCGTGAGGCACTaGTGGCTGACAGCACTGAGAAGACAGACGCTAGCACTGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PLLLSSGAPVRPVRH*WLTALRRQTLALSS Trigger: AGAAGACAGTGCTAGCGTCTGTCTTCTCAGTGCTGTCAGCCATCAGTGCCTCACGGGCCGAACAGGAGCACCTGAAGATAGAAGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 90 bp | ACACAGGGTACAATGGAAAACACTGGCTGCTCTTCAGAGTCCTCGTaGGGTTGGCCTGGAAGCCGGGTAGCCCCCTTTCTAATCCATTCC | + |
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Preference number: 5 (lower is better) Translates to: TQGTMENTGCSSESS*GWPGSRVAPFLIHS Trigger: GGAATGGATTAGAAAGGGGGCTACCCGGCTTCCAGGCCAACCCCACGAGGACTCTGAAGAGCAGCCAGTGTTTTCCATTGTACCCTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS-3UTR CAA 90 bp | ACGCCACACCCTTTTTCCTCTCCCTCTAGAACTTGTCCTCTGAGGGGCAGCCTCCATATGGAAGTCGTCTaGGGTGGGACCACAGATCGT | + |
|
Preference number: 5 (lower is better) Translates to: TPHPFSSPSRTCPLRGSLHMEVV*GGTTDR Trigger: ACGATCTGTGGTCCCACCCAAGACGACTTCCATATG...GAGGCTGCCCCTCAGAGGACAAGTTCTAGAGGGAGAGGAAAAAGGGTGTGGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 90 bp | GCACTGAGAAGACAGACGCTAGCACTGTCTTCTGTTCCTGCAGTATaGCAGGCGGGTCATCAGGCTGGCAGAATTCATGGCACACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALRRQTLALSSVPAV*QAGHQAGRIHGTPG Trigger: ACCTGGTGTGCCATGAATTCTGCCAGCCTGATGACCCGCCTGTCATACTGCAGGAACAGAAGACAGTGCTAGCGTCTGTCTTCTCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 90 bp | GCTGACAGCACTGAGAAGACAGACGCTAGCACTGTCTTCTGTTCCTaGAGTATGACAGGCGGGTCATCAGGCTGGCAGAATTCATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ADSTEKTDASTVFCS*SMTGGSSGWQNSWH Trigger: GTGCCATGAATTCTGCCAGCCTGATGACCCGCCTGTCATACTGCAGGAACAGAAGACAGTGCTAGCGTCTGTCTTCTCAGTGCTGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 90 bp | GGGTGTTCCCGGATCCTTCTAACCCAGACACTGGCCACTTCTGTCTaGGAAAGGCAAGTAAGCAACAACCTGCAAGTTTCCAGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GCSRILLTQTLATSV*ERQVSNNLQVSSRV Trigger: CACCCTGCTGGAAACTTGCAGGTTGTTGCTTACTTGCCTTTCCCAGACAGAAGTGGCCAGTGTCTGGGTTAGAAGGATCCGGGAACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 90 bp | TTTCAGAGCGCACTTGTTTGGCAGCTTCCAGCACACAGGGTACAATaGAAAACACTGGCTGCTCTTCAGAGTCCTCGTGGGGTTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FQSALVWQLPAHRVQ*KTLAALQSPRGVGL Trigger: CAGGCCAACCCCACGAGGACTCTGAAGAGCAGCCAGTGTTTTCCATTGTACCCTGTGTGCTGGAAGCTGCCAAACAAGTGCGCTCTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS-3UTR CAA 90 bp | GGTCAGGGAAGGCTGGCAGAACTTCCTAGAGCGCCTCTTTGCCTCTTTTGTTTCTCAGAGCGCACTTGTTaGGCAGCTTCCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: GQGRLAELPRAPLCLFCFSERTC*AASSTQ Trigger: CTGTGTGCTGGAAGCTGCCAAACAAGTGCGCTCTGA...GAAACAAAAGAGGCAAAGAGGCGCTCTAGGAAGTTCTGCCAGCCTTCCCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 90 bp | AGCACTGTCTTCTGTTCCTGCAGTATGACAGGCGGGTCATCAGGCTaGCAGAATTCATGGCACACCAGGTCAAAGAGTAAACGCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: STVFCSCSMTGGSSG*QNSWHTRSKSKRHV Trigger: CACGTGGCGTTTACTCTTTGACCTGGTGTGCCATGAATTCTGCCAGCCTGATGACCCGCCTGTCATACTGCAGGAACAGAAGACAGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS-3UTR CAA 90 bp | ATGTCTACCTGGTTTCCTTTTGCTGAACCGTCTGACAGTTTAGCCCTCTGTCAGCGGGGACACGGGGATTaGGCCAGCACTCCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: MSTWFPFAEPSDSLALCQRGHGD*ASTPMN Trigger: ATTCATGGGAGTGCTGGCCAAATCCCCGTGTCCCCG...CTGACAGAGGGCTAAACTGTCAGACGGTTCAGCAAAAGGAAACCAGGTAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 90 bp | ATTAGGCTGTCAATTAGAGGAAGATCCCCTTCTTCTATCTTCAGGTaGTCCTGTTCGGCCCGTGAGGCACTGATGGCTGACAGCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IRLSIRGRSPSSIFR*SCSAREALMADSTE Trigger: CTCAGTGCTGTCAGCCATCAGTGCCTCACGGGCCGAACAGGAGCACCTGAAGATAGAAGAAGGGGATCTTCCTCTAATTGACAGCCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 90 bp | CACACAAACACTGCAGCAGCACCTGCCCATGATCCTCGTTCTTGCTaGTGGACTCGCATATCTCCCGGAAACAAGCCATATTCCCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HTNTAAAPAHDPRSC*WTRISPGNKPYSLK Trigger: TTTTAGGGAATATGGCTTGTTTCCGGGAGATATGCGAGTCCATCAGCAAGAACGAGGATCATGGGCAGGTGCTGCTGCAGTGTTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 90 bp | TTTGTCCACGACCTCCCCGACCTTCACCAGCAAGTCAACGTTTGTTaGACTGGACATGATGAAGCAAACGTTAGCGTAGACAGATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FVHDLPDLHQQVNVC*TGHDEANVSVDRWV Trigger: CACCCATCTGTCTACGCTAACGTTTGCTTCATCATGTCCAGTTCAACAAACGTTGACTTGCTGGTGAAGGTCGGGGAGGTCGTGGACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 90 bp | GATTTGGCCAGCACTCCCATGAATATGTCAGGAGCCTTAAATTCTTaGAGAAATAAAGCCACATCCTCGTCCATGGACATATCCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: DLASTPMNMSGALNS*RNKATSSSMDISQT Trigger: AGTCTGGGATATGTCCATGGACGAGGATGTGGCTTTATTTCTCCAAGAATTTAAGGCTCCTGACATATTCATGGGAGTGCTGGCCAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 90 bp | AATTCACATGAAATGTCCTTCAAGATCTTCATATGGAAGTCGTCTTaGGTGGGACCACAGATCGTAGGCTCTTCTGTATCAGACTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NSHEMSFKIFIWKSS*VGPQIVGSSVSDSE Trigger: CTCAGAGTCTGATACAGAAGAGCCTACGATCTGTGGTCCCACCCAAGACGACTTCCATATGAAGATCTTGAAGGACATTTCATGTGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS-3UTR CAA 90 bp | TTCGCTGGCATACACACAGCTCAACTCTACAGAGAGAAAATGCTGCTCGCTGAAGAGCCACCTTTTCCTTaGTTAACACCTGAAAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: FAGIHTAQLYREKMLLAEEPPFP*LTPEKY Trigger: ATATTTTTCAGGTGTTAACAAAGGAAAAGGTGGCTC...TTCAGCGAGCAGCATTTTCTCTCTGTAGAGTTGAGCTGTGTGTATGCCAGCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 90 bp | GTAGGCTCTTCTGTATCAGACTCTGAGGGGTTCTCTGGTTTCTTCTaGCAATGTTCCATATTTTGTAATACCCGAATTAGGCTGTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: VGSSVSDSEGFSGFF*QCSIFCNTRIRLSI Trigger: AATTGACAGCCTAATTCGGGTATTACAAAATATGGAACATTGTCAGAAGAAACCAGAGAACCCCTCAGAGTCTGATACAGAAGAGCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 90 bp | ATATTAGAAAGGAATTCACATGAAATGTCCTTCAAGATCTTCATATaGAAGTCGTCTTGGGTGGGACCACAGATCGTAGGCTCTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ILERNSHEMSFKIFI*KSSWVGPQIVGSSV Trigger: TACAGAAGAGCCTACGATCTGTGGTCCCACCCAAGACGACTTCCATATGAAGATCTTGAAGGACATTTCATGTGAATTCCTTTCTAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 72 bp | CGAAGAGCCAGTGCTTGCTGTAGACCGTGCTCCCGATaGGGTCTCCCCCACCCAGGTCCTCTTCATCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RRASACCRPCSR*GLPHPGPLHPP Trigger: CGGAGGATGAAGAGGACCTGGGTGGGGGAGACCGCATCGGGAGCACGGTCTACAGCAAGCACTGGCTCTTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 72 bp | GCAGGAGGCTCTGAAAGGCGCAGGAGCACTTCTGCTTaGTTAACTGGCCCTCCTTCAGTCCCTGAGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: AGGSERRRSTSA*LTGPPSVPEPP Trigger: AGGTGGCTCAGGGACTGAAGGAGGGCCAGTTAAGCAAGCAGAAGTGCTCCTGCGCCTTTCAGAGCCTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 72 bp | GCTGAGCCAGATGTGCCACTTTCAGGTGTGACAATCTaGATGAGCCCGCTGAGGACGCCGAAGAGCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AEPDVPLSGVTI*MSPLRTPKSQC Trigger: GCACTGGCTCTTCGGCGTCCTCAGCGGGCTCATCCAGATTGTCACACCTGAAAGTGGCACATCTGGCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 72 bp | GGCAGCTTCCAGCACACAGGGTACAATGGAAAACACTaGCTGCTCTTCAGAGTCCTCGTGGGGTTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSFQHTGYNGKH*LLFRVLVGLAW Trigger: CCAGGCCAACCCCACGAGGACTCTGAAGAGCAGCCAGTGTTTTCCATTGTACCCTGTGTGCTGGAAGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 72 bp | ACTGCACGATGGCTTGCACGCCGTCATCCACCGTGGTaGGCAGCTGTAAGATGCGCATGTAAACATCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TARWLARRHPPW*AAVRCACKHPA Trigger: GGCTGGATGTTTACATGCGCATCTTACAGCTGCTCACCACGGTGGATGACGGCGTGCAAGCCATCGTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 72 bp | CTATCTTCAGGTGCTCCTGTTCGGCCCGTGAGGCACTaGTGGCTGACAGCACTGAGAAGACAGACGCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSGAPVRPVRH*WLTALRRQTLA Trigger: TGCTAGCGTCTGTCTTCTCAGTGCTGTCAGCCATCAGTGCCTCACGGGCCGAACAGGAGCACCTGAAGATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 72 bp | GCTTCCAGCACACAGGGTACAATGGAAAACACTGGCTaGTCTTCAGAGTCCTCGTGGGGTTGGCCTGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSTQGTMENTG*SSESSWGWPGS Trigger: GCTTCCAGGCCAACCCCACGAGGACTCTGAAGAGCAGCCAGTGTTTTCCATTGTACCCTGTGTGCTGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 72 bp | ACAATGGAAAACACTGGCTGCTCTTCAGAGTCCTCGTaGGGTTGGCCTGGAAGCCGGGTAGCCCCCTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TMENTGCSSESS*GWPGSRVAPFL Trigger: TAGAAAGGGGGCTACCCGGCTTCCAGGCCAACCCCACGAGGACTCTGAAGAGCAGCCAGTGTTTTCCATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 72 bp | AGACAGACGCTAGCACTGTCTTCTGTTCCTGCAGTATaGCAGGCGGGTCATCAGGCTGGCAGAATTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RQTLALSSVPAV*QAGHQAGRIHG Trigger: GCCATGAATTCTGCCAGCCTGATGACCCGCCTGTCATACTGCAGGAACAGAAGACAGTGCTAGCGTCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 72 bp | ACTGCAGCAGCACCTGCCCATGATCCTCGTTCTTGCTaGTGGACTCGCATATCTCCCGGAAACAAGCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: TAAAPAHDPRSC*WTRISPGNKPY Trigger: ATATGGCTTGTTTCCGGGAGATATGCGAGTCCATCAGCAAGAACGAGGATCATGGGCAGGTGCTGCTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS GCA 72 bp | ACTGAGAAGACAGACGCTAGCACTGTCTTCTGTTCCTaGAGTATGACAGGCGGGTCATCAGGCTGGCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TEKTDASTVFCS*SMTGGSSGWQN Trigger: ATTCTGCCAGCCTGATGACCCGCCTGTCATACTGCAGGAACAGAAGACAGTGCTAGCGTCTGTCTTCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 72 bp | CGGATCCTTCTAACCCAGACACTGGCCACTTCTGTCTaGGAAAGGCAAGTAAGCAACAACCTGCAAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RILLTQTLATSV*ERQVSNNLQVS Trigger: GGAAACTTGCAGGTTGTTGCTTACTTGCCTTTCCCAGACAGAAGTGGCCAGTGTCTGGGTTAGAAGGATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CAA 72 bp | CCCACACAGATTTCTCTTAATCGGGGACACGGGGATTaGGCCAGCACTCCCATGAATATGTCAGGAGCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: PTQISLNRGHGD*ASTPMNMSGAL Trigger: TAAGGCTCCTGACATATTCATGGGAGTGCTGGCCAAATCCCCGTGTCCCCGATTAAGAGAAATCTGTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS TCA 72 bp | GACCTCCCCGACCTTCACCAGCAAGTCAACGTTTGTTaGACTGGACATGATGAAGCAAACGTTAGCGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DLPDLHQQVNVC*TGHDEANVSVD Trigger: GTCTACGCTAACGTTTGCTTCATCATGTCCAGTTCAACAAACGTTGACTTGCTGGTGAAGGTCGGGGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CCA 72 bp | TTCTGTTCCTGCAGTATGACAGGCGGGTCATCAGGCTaGCAGAATTCATGGCACACCAGGTCAAAGAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FCSCSMTGGSSG*QNSWHTRSKSK Trigger: TTTACTCTTTGACCTGGTGTGCCATGAATTCTGCCAGCCTGATGACCCGCCTGTCATACTGCAGGAACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CAA 72 bp | CATTCCAACATGAGTTTTTCATCTAAGTCAAAGAGTTaGTCCACGACCTCCCCGACCTTCACCAGCAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSNMSFSSKSKS*STTSPTFTSKS Trigger: TGACTTGCTGGTGAAGGTCGGGGAGGTCGTGGACAAACTCTTTGACTTAGATGAAAAACTCATGTTGGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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| CDS CAA 90 bp | TTTCTAATCCATTCCAACATGAGTTTTTCATCTAAGTCAAAGAGTTaGTCCACGACCTCCCCGACCTTCACCAGCAAGTCAACGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FLIHSNMSFSSKSKS*STTSPTFTSKSTFV Trigger: AACAAACGTTGACTTGCTGGTGAAGGTCGGGGAGGTCGTGGACAAACTCTTTGACTTAGATGAAAAACTCATGTTGGAATGGATTAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143082.4 |
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