Pregenerated sensors for S1PR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045087Ensembl transcript IDs: ENSMUST00000122088.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCCCCACAACCTGCCCTTTCATCTCCTGCTCCTCAATTTCTGCTaGAGCCATATGGAATGGCTCTCCTTCAGGGCTTCCCAGCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: LPHNLPFHLLLLNFC*SHMEWLSFRASQLR Trigger: CCTAAGCTGGGAAGCCCTGAAGGAGAGCCATTCCATATGGCTGCAGCAGAAATTGAGGAGCAGGAGATGAAAGGGCAGGTTGTGGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR GCA 90 bp | AGACTTCCCCACAACCTGCCCTTTCATCTCCTGCTCCTCAATTTCTaGTGCAGCCATATGGAATGGCTCTCCTTCAGGGCTTCCCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: RLPHNLPFHLLLLNF*CSHMEWLSFRASQL Trigger: AAGCTGGGAAGCCCTGAAGGAGAGCCATTCCATATGGCTGCAGCAGAAATTGAGGAGCAGGAGATGAAAGGGCAGGTTGTGGGGAAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 90 bp | ACCTGCCCTTTCATCTCCTGCTCCTCAATTTCTGCTGCAGCCATATaGAATGGCTCTCCTTCAGGGCTTCCCAGCTTAGGTTCCACTACC | + |
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Preference number: 1 (lower is better) Translates to: TCPFISCSSISAAAI*NGSPSGLPSLGSTT Trigger: GGTAGTGGAACCTAAGCTGGGAAGCCCTGAAGGAGAGCCATTCCATATGGCTGCAGCAGAAATTGAGGAGCAGGAGATGAAAGGGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 90 bp | CCCTTTCATCTCCTGCTCCTCAATTTCTGCTGCAGCCATATGGAATaGCTCTCCTTCAGGGCTTCCCAGCTTAGGTTCCACTACCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: PFHLLLLNFCCSHME*LSFRASQLRFHYLD Trigger: ATCCAGGTAGTGGAACCTAAGCTGGGAAGCCCTGAAGGAGAGCCATTCCATATGGCTGCAGCAGAAATTGAGGAGCAGGAGATGAAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 90 bp | AGGGCATCAGATAACCTTGGAACTGAAGTTGCCAGAATCACCACTTaGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGGGTAACAAGT | + |
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Preference number: 1 (lower is better) Translates to: RASDNLGTEVARITT*VLGMEHRSPARVTS Trigger: ACTTGTTACCCTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGTGATTCTGGCAACTTCAGTTCCAAGGTTATCTGATGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 90 bp | TGGAATGGCTCTCCTTCAGGGCTTCCCAGCTTAGGTTCCACTACCTaGATACCTTCTCATCACTTTCTTCTTTCCCTTATTGTCCATCTC | + |
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Preference number: 1 (lower is better) Translates to: WNGSPSGLPSLGSTT*IPSHHFLLSLIVHL Trigger: GAGATGGACAATAAGGGAAAGAAGAAAGTGATGAGAAGGTATCCAGGTAGTGGAACCTAAGCTGGGAAGCCCTGAAGGAGAGCCATTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 90 bp | ATTGTCCATCTCAGATCCCGAGTGCATTTTTGTCTGTTCTTGTTATaGGGTGATCAATCACTTTCCCTTCTTTCTTGTATGTCCCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: IVHLRSRVHFCLFLL*GDQSLSLLSCMSPS Trigger: GGAGGGGGACATACAAGAAAGAAGGGAAAGTGATTGATCACCCCATAACAAGAACAGACAAAAATGCACTCGGGATCTGAGATGGACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR GCA 90 bp | CTCATCACTTTCTTCTTTCCCTTATTGTCCATCTCAGATCCCGAGTaGATTTTTGTCTGTTCTTGTTATGGGGTGATCAATCACTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LITFFFPLLSISDPE*IFVCSCYGVINHFP Trigger: GGGAAAGTGATTGATCACCCCATAACAAGAACAGACAAAAATGCACTCGGGATCTGAGATGGACAATAAGGGAAAGAAGAAAGTGATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCACAGCTCTGTTTCCTCTGTAGCCAGCCACTACTCCTGCCAGCCCTTAGCGACTTCCCCACAACCTaGCCTTTCATCTCCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: CPQLCFLCSQPLLLPALSDFPTT*PFISCS Trigger: GGAGCAGGAGATGAAAGGGCAGGTTGTGGGGAAGTC...GCTAAGGGCTGGCAGGAGTAGTGGCTGGCTACAGAGGAAACAGAGCTGTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGCCAGAATCACCACTTGGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGTTGGCAGCTGATATCTaGCAGTCTCCAGAGCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SCQNHHLGAGNGTQVPCKLAADI*QSPEPN Trigger: ATTTGGCTCTGGAGACTGTCAGATATCAGCTGCCAA...CTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGTGATTCTGGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCCACAGCTCTGTTTCCTCTGTAGCCAGCCACTACTCCTGCCAGCCCTTATTTAGCCATTCCCCTTaGACTTTGGTAGTCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: FVHSSVSSVASHYSCQPLFSHSP*TLVVTG Trigger: CCCTGTGACTACCAAAGTTCAAGGGGAATGGCTAAA...TAAGGGCTGGCAGGAGTAGTGGCTGGCTACAGAGGAAACAGAGCTGTGGACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR GCA 90 bp | ACCACTTGGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGGGTAACAAGTGTTTGCCCTTTCATCTCCTaGTCCTCAATTTCTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TTWVLGMEHRSPARVTSVCPFIS*SSISAA Trigger: TGCAGCAGAAATTGAGGAGCAGGAGATGAAAGGGCA...AACACTTGTTACCCTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR TCA 90 bp | ATCACCACTTGGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGGGTAACAAGTGCTATTTCCTACAGATaGTGCGCTTATTTGGCGAGT | + |
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Preference number: 2 (lower is better) Translates to: ITTWVLGMEHRSPARVTSAISYR*CAYLAS Trigger: ACTCGCCAAATAAGCGCATCATCTGTAGGAAATAGC...ACTTGTTACCCTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCATCAGATAACCTTGGAACTGAAGTTGCCAGAATCACCACTTGGGTGCTGGTGGAAGTTTGGCAGCTaGTATCTGACAGTCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GHQITLELKLPESPLGCWWKFGS*YLTVSR Trigger: TCTGGAGACTGTCAGATATCAGCTGCCAAACTTCCA...CCAGCACCCAAGTGGTGATTCTGGCAACTTCAGTTCCAAGGTTATCTGATGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCATCAGATAACCTTGGAACTGAAGTTGCCAGAATCACCACTTGGGTGCTGGCTGCTCCTCAATTTCTaGTGCAGCCATATGGAATGG | + |
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Preference number: 2 (lower is better) Translates to: GHQITLELKLPESPLGCWLLLNF*CSHMEW Trigger: CCATTCCATATGGCTGCAGCAGAAATTGAGGAGCAG...CCAGCACCCAAGTGGTGATTCTGGCAACTTCAGTTCCAAGGTTATCTGATGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGTCCACAGCTCTGTTTCCTCTGTAGCCAGCCACTACTCCTGCCAGCCCTTATGTCTGTTCTTGTTATaGGGTGATCAATCACTTTCC | + |
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Preference number: 2 (lower is better) Translates to: FVHSSVSSVASHYSCQPLCLFLL*GDQSLS Trigger: GGAAAGTGATTGATCACCCCATAACAAGAACAGACA...TAAGGGCTGGCAGGAGTAGTGGCTGGCTACAGAGGAAACAGAGCTGTGGACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCATCAGATAACCTTGGAACTGAAGTTGCCAGAATCACCACTTGGGTGCTGGTTAGGTTCCACTACCTaGATACCTTCTCATCACTTT | + |
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Preference number: 2 (lower is better) Translates to: GHQITLELKLPESPLGCWLGSTT*IPSHHF Trigger: AAAGTGATGAGAAGGTATCCAGGTAGTGGAACCTAA...CCAGCACCCAAGTGGTGATTCTGGCAACTTCAGTTCCAAGGTTATCTGATGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR GCA 90 bp | AATTTGTATGAAGAACCTGTCCACACTCTGGAAGTTTGGCAGCTGATATCTGACCTCCTCAATTTCTGCTaGAGCCATATGGAATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: NLYEEPVHTLEVWQLISDLLNFC*SHMEWL Trigger: GAGCCATTCCATATGGCTGCAGCAGAAATTGAGGAG...GTCAGATATCAGCTGCCAAACTTCCAGAGTGTGGACAGGTTCTTCATACAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CAA 90 bp | TCCCTTATTGTCCATCTCAGATCCCGAGTGCATTTTTGTCTGTTCTaGTTATGGGGTGATCAATCACTTTCCCTTCTTTCTTGTATGTCC | + |
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Preference number: 2 (lower is better) Translates to: SLIVHLRSRVHFCLF*LWGDQSLSLLSCMS Trigger: GGACATACAAGAAAGAAGGGAAAGTGATTGATCACCCCATAACAAGAACAGACAAAAATGCACTCGGGATCTGAGATGGACAATAAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CAA 90 bp | CCCAGTAAGGACAACTCCTTGAATTGTTTTTATTGTGGTTGTAATTaGTATGAAGAACCTGTCCACACTCTGGAAGTTTGGCAGCTGATA | + |
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Preference number: 2 (lower is better) Translates to: PSKDNSLNCFYCGCN*YEEPVHTLEVWQLI Trigger: TATCAGCTGCCAAACTTCCAGAGTGTGGACAGGTTCTTCATACAAATTACAACCACAATAAAAACAATTCAAGGAGTTGTCCTTACTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 72 bp | CTCCTGCTCCTCAATTTCTGCTGCAGCCATATGGAATaGCTCTCCTTCAGGGCTTCCCAGCTTAGGTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LLLLNFCCSHME*LSFRASQLRFH Trigger: GTGGAACCTAAGCTGGGAAGCCCTGAAGGAGAGCCATTCCATATGGCTGCAGCAGAAATTGAGGAGCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR TCA 72 bp | GTACCATGTGCATGCCTGGTGCCCTCAGAGGTCAGATaGGGGCATCAGATAACCTTGGAACTGAAGTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: VPCACLVPSEVR*GHQITLELKLP Trigger: TGGCAACTTCAGTTCCAAGGTTATCTGATGCCCTCATCTGACCTCTGAGGGCACCAGGCATGCACATGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR GCA 72 bp | CACAGCTCTGTTTCCTCTGTAGCCAGCCACTACTCCTaGCAGCCCTTAGCACACTCTTATCTAGACATCACC | + |
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Preference number: 3 (lower is better) Translates to: HSSVSSVASHYS*QPLAHSYLDIT Trigger: GGTGATGTCTAGATAAGAGTGTGCTAAGGGCTGGCAGGAGTAGTGGCTGGCTACAGAGGAAACAGAGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCCACAGCTCTGTTTCCTCTGTAGCCAGCCACTACTCCTGCCAGCCCTTAGCAGGAGAGTCCCTCCTTaGTTTAGAATTCTCTATGGC | + |
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Preference number: 3 (lower is better) Translates to: CPQLCFLCSQPLLLPALSRRVPP*FRILYG Trigger: GCCATAGAGAATTCTAAACAAAGGAGGGACTCTCCT...GCTAAGGGCTGGCAGGAGTAGTGGCTGGCTACAGAGGAAACAGAGCTGTGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCATTCTTGGAGCCCCGCTCTCCTTTATCCCTTCATCTTTTAGCCATTCCACTTTCCCTTCTTTCTaGTATGTCCCCCTCCGTCGC | + |
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Preference number: 3 (lower is better) Translates to: LSILGAPLSFIPSSFSHSTFPSF*YVPLRR Trigger: GCGACGGAGGGGGACATACAAGAAAGAAGGGAAAGT...GGAATGGCTAAAAGATGAAGGGATAAAGGAGAGCGGGGCTCCAAGAATGCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR GCA 72 bp | CAACAAGACTTCCCCACAACCTGCCCTTTCATCTCCTaGTCCTCAATTTCTGCTGCAGCCATATGGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: QQDFPTTCPFIS*SSISAAAIWNG Trigger: GCCATTCCATATGGCTGCAGCAGAAATTGAGGAGCAGGAGATGAAAGGGCAGGTTGTGGGGAAGTCTTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 72 bp | TTCATCTCCTGCTCCTCAATTTCTGCTGCAGCCATATaGAATGGCTCTCCTTCAGGGCTTCCCAGCTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: FISCSSISAAAI*NGSPSGLPSLG Trigger: ACCTAAGCTGGGAAGCCCTGAAGGAGAGCCATTCCATATGGCTGCAGCAGAAATTGAGGAGCAGGAGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR TCA 72 bp | CCCTTAGCACACTCTTATCTAGACATCACCTGGTTCTaGGCATTCTTGGAGCCCCGCTCTCCTTTATCCCTT | + |
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Preference number: 3 (lower is better) Translates to: PLAHSYLDITWF*AFLEPRSPLSL Trigger: AAGGGATAAAGGAGAGCGGGGCTCCAAGAATGCTCAGAACCAGGTGATGTCTAGATAAGAGTGTGCTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR GCA 72 bp | ATGAGAGTTTTGCCTGCATTCAATCTTTGTACCATGTaGATGCCTGGTGCCCTCAGAGGTCAGATGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: MRVLPAFNLCTM*MPGALRGQMRA Trigger: TGCCCTCATCTGACCTCTGAGGGCACCAGGCATGCACATGGTACAAAGATTGAATGCAGGCAAAACTCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 72 bp | ACTTTCCCTTCTTTCTTGTATGTCCCCCTCCGTCGCTaGCTATTTCCTACAGATGATGCGCTTATTTGGCGA | + |
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Preference number: 3 (lower is better) Translates to: TFPSFLYVPLRR*LFPTDDALIWR Trigger: TCGCCAAATAAGCGCATCATCTGTAGGAAATAGCCAGCGACGGAGGGGGACATACAAGAAAGAAGGGAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTGCCAGAATCACCACTTGGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGCATTTTTGTCTGTTCTaGTTATGGGGTGATCAATCA | + |
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Preference number: 3 (lower is better) Translates to: SCQNHHLGAGNGTQVPCKHFCLF*LWGDQS Trigger: TGATTGATCACCCCATAACAAGAACAGACAAAAATG...CTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGTGATTCTGGCAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR TCA 72 bp | ATGAAGAACCTGTCCACACTCTGGAAGTTTGGCAGCTaGTATCTGACAGTCTCCAGAGCCAAATTTCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: MKNLSTLWKFGS*YLTVSRAKFPD Trigger: GTCTGGAAATTTGGCTCTGGAGACTGTCAGATATCAGCTGCCAAACTTCCAGAGTGTGGACAGGTTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 72 bp | TCTCCTTCAGGGCTTCCCAGCTTAGGTTCCACTACCTaGATACCTTCTCATCACTTTCTTCTTTCCCTTATT | + |
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Preference number: 3 (lower is better) Translates to: SPSGLPSLGSTT*IPSHHFLLSLI Trigger: AATAAGGGAAAGAAGAAAGTGATGAGAAGGTATCCAGGTAGTGGAACCTAAGCTGGGAAGCCCTGAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR TCA 72 bp | ATCCCGAGTGCATTTTTGTCTGTTCTTGTTATGGGGTaGTCAATCACTTTCCCTTCTTTCTTGTATGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: IPSAFLSVLVMG*SITFPSFLYVP Trigger: GGGGACATACAAGAAAGAAGGGAAAGTGATTGATCACCCCATAACAAGAACAGACAAAAATGCACTCGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CCA 72 bp | CTCAGATCCCGAGTGCATTTTTGTCTGTTCTTGTTATaGGGTGATCAATCACTTTCCCTTCTTTCTTGTATG | + |
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Preference number: 3 (lower is better) Translates to: LRSRVHFCLFLL*GDQSLSLLSCM Trigger: CATACAAGAAAGAAGGGAAAGTGATTGATCACCCCATAACAAGAACAGACAAAAATGCACTCGGGATCTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR GCA 72 bp | TTCTTCTTTCCCTTATTGTCCATCTCAGATCCCGAGTaGATTTTTGTCTGTTCTTGTTATGGGGTGATCAAT | + |
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Preference number: 3 (lower is better) Translates to: FFFPLLSISDPE*IFVCSCYGVIN Trigger: ATTGATCACCCCATAACAAGAACAGACAAAAATGCACTCGGGATCTGAGATGGACAATAAGGGAAAGAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR GCA 72 bp | AAGATTTATTTAGCTTGTTTGTATGAGAGTTTTGCCTaGATTCAATCTTTGTACCATGTGCATGCCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: KIYLACLYESFA*IQSLYHVHAWC Trigger: GCACCAGGCATGCACATGGTACAAAGATTGAATGCAGGCAAAACTCTCATACAAACAAGCTAAATAAATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | ATCACCACTTGGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGGGTAACAAGTAGGACGAGGTGGCCCTaGGGGACCCAGGACCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ITTWVLGMEHRSPARVTSRTRWP*GTQDPP Trigger: GGGCGGGTCCTGGGTCCCGCAGGGCCACCTCGTCCT...ACTTGTTACCCTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | GGGCATCAGATAACCTTGGAACTGAAGTTGCCAGAATCACCACTTGGGTGCTGGGCGACTGGCGGCGGGTaGGGGTCCACGACGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GHQITLELKLPESPLGCWATGGG*GSTTGH Trigger: ATGGCCCGTCGTGGACCCGCACCCGCCGCCAGTCGC...CCAGCACCCAAGTGGTGATTCTGGCAACTTCAGTTCCAAGGTTATCTGATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | TGTCCACAGCTCTGTTTCCTCTGTAGCCAGCCACTACTCCTGCCAGCCCTTAGCAGATGGCAGCCAGGATaGCCAGGAAGGCCAGCACGC | + |
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Preference number: 4 (lower is better) Translates to: CPQLCFLCSQPLLLPALSRWQPG*PGRPAR Trigger: GCGTGCTGGCCTTCCTGGGCATCCTGGCTGCCATCT...GCTAAGGGCTGGCAGGAGTAGTGGCTGGCTACAGAGGAAACAGAGCTGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | ACCACTTGGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGGGTAACAAGTGTTAGCCGCAGGAGCGCGTaGCGCAGATCTCGGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TTWVLGMEHRSPARVTSVSRRSA*RRSRLV Trigger: CACCAACCGAGATCTGCGCCACGCGCTCCTGCGGCT...AACACTTGTTACCCTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCCAGAATCACCACTTGGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGGCTGCGATCCAAGGTTaGTGGCAGGCAGCGTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SCQNHHLGAGNGTQVPCKAAIQG*WQAASQ Trigger: CTGCGACGCTGCCTGCCACCAACCTTGGATCGCAGC...CTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGTGATTCTGGCAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCCAGAATCACCACTTGGGTGCTGGGAATGGAACACAGGTCCCCTGCAAGAGAGCACATAGGCCTTaGCGTAGAGCGGCAGCACGG | + |
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Preference number: 4 (lower is better) Translates to: SCQNHHLGAGNGTQVPCKRAHRP*RRAAAR Trigger: CCGTGCTGCCGCTCTACGCCAAGGCCTATGTGCTCT...CTTGCAGGGGACCTGTGTTCCATTCCCAGCACCCAAGTGGTGATTCTGGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | ACACTCTTATCTAGACATCACCTGGTTCTGAGCATTCTTGGAGCCCCGCTCTCCTGGAGGAGTCTTGGTTaGAGGGTCCGCGGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TLLSRHHLVLSILGAPLSWRSLG*RVRGHS Trigger: GCTGTGGCCGCGGACCCTGCAACCAAGACTCCTCCA...GGAGAGCGGGGCTCCAAGAATGCTCAGAACCAGGTGATGTCTAGATAAGAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | CTACTCCTGCCAGCCCTTAGCACACTCTTATCTAGACATCACCTGGTTCTGAGCAGAGCGGCAGCACGGTaGAGCAGGTTTCCAGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: LLLPALSTLLSRHHLVLSRAAAR*SRFPGV Trigger: GACGCCTGGAAACCTGCTCCACCGTGCTGCCGCTCT...GCTCAGAACCAGGTGATGTCTAGATAAGAGTGTGCTAAGGGCTGGCAGGAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTCTGAATCCAGGAGAGTCCCTCCTTTGTTTAGAATTCTCTATGGCTCCCGGACAGTAGGATGTTaGTGGCGTAGGCCGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: WRSESRRVPPLFRILYGSRTVGC*WRRPPR Trigger: CCGGGGCGGCCTACGCCACCAACATCCTACTGTCCG...GGAGCCATAGAGAATTCTAAACAAAGGAGGGACTCTCCTGGATTCAGACCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTCTGAATCCAGGAGAGTCCCTCCTTTGTTTAGAATTCTCTATGGCTCCCTCCAGGACTGCCGGTaGAGCAGCTGGTGTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: WRSESRRVPPLFRILYGSLQDCR*SSWCPP Trigger: GGGTGGACACCAGCTGCTCCACCGGCAGTCCTGGAG...GGAGCCATAGAGAATTCTAAACAAAGGAGGGACTCTCCTGGATTCAGACCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCTTAGCACACTCTTATCTAGACATCACCTGGTTCTGAGCATTCTTGGAACAGTAGGATGTTGGTaGCGTAGGCCGCCCCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PALSTLLSRHHLVLSILGTVGCW*RRPPRR Trigger: TCGCCGGGGCGGCCTACGCCACCAACATCCTACTGT...TCCAAGAATGCTCAGAACCAGGTGATGTCTAGATAAGAGTGTGCTAAGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | CATATGGAATGGCTCTCCTTCAGGGCTTCCCAGCTTAGGTTCCACTACCTGGATCATAGAGCGCACAGATaGCAGCCAGGATGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HMEWLSFRASQLRFHYLDHRAHR*QPGCPG Trigger: TCCTGGGCATCCTGGCTGCCATCTGTGCGCTCTATG...ATCCAGGTAGTGGAACCTAAGCTGGGAAGCCCTGAAGGAGAGCCATTCCATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | TGGAGGTCTGAATCCAGGAGAGTCCCTCCTTTGTTTAGAATTCTCTATGGCTCCGCGCCCCGCGGAGCTTaGCGGTGTAGTTGTAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: WRSESRRVPPLFRILYGSAPRGA*RCSCSE Trigger: TTCACTACAACTACACCGGCAAGCTCCGCGGGGCGC...GGAGCCATAGAGAATTCTAAACAAAGGAGGGACTCTCCTGGATTCAGACCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | CATCACTTTCTTCTTTCCCTTATTGTCCATCTCAGATCCCGAGTGCATTTTTGTCACAGCCAGACACACTaGGGCGTCTGCGCGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: HHFLLSLIVHLRSRVHFCHSQTH*GVCAQA Trigger: GGCCTGCGCGCAGACGCCGCAGTGTGTCTGGCTGTG...ACAAAAATGCACTCGGGATCTGAGATGGACAATAAGGGAAAGAAGAAAGTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | CATCACTTTCTTCTTTCCCTTATTGTCCATCTCAGATCCCGAGTGCATTTTTGTAGGAAGGGATCGGCCTaGAGGAGCACGGGACACGCG | + |
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Preference number: 4 (lower is better) Translates to: HHFLLSLIVHLRSRVHFCRKGSA*RSTGHA Trigger: CGCGTGTCCCGTGCTCCTGCAGGCCGATCCCTTCCT...ACAAAAATGCACTCGGGATCTGAGATGGACAATAAGGGAAAGAAGAAAGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTCTGAATCCAGGAGAGTCCCTCCTTTGTTTAGAATTCTCTATGGCTCCCAAGGAGCAGAAACATaGGCGCATGGAAGCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: WRSESRRVPPLFRILYGSQGAET*AHGSEG Trigger: ACCCTCGCTTCCATGCGCCCATGTTTCTGCTCCTTG...GGAGCCATAGAGAATTCTAAACAAAGGAGGGACTCTCCTGGATTCAGACCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCTTAGCACACTCTTATCTAGACATCACCTGGTTCTGAGCATTCTTGGATCCACCCCGTCCTGCTaGGGAGACAAGTGTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PALSTLLSRHHLVLSILGSTPSC*GDKCSD Trigger: ATCAGAACACTTGTCTCCCCAGCAGGACGGGGTGGA...TCCAAGAATGCTCAGAACCAGGTGATGTCTAGATAAGAGTGTGCTAAGGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | CTGAGCATTCTTGGAGCCCCGCTCTCCTTTATCCCTTCATCTTTTAGCCATTCCCTGACAGTAAATCCTTaGATAGAGCGCACAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LSILGAPLSFIPSSFSHSLTVNP*IERTDG Trigger: GCCATCTGTGCGCTCTATGCAAGGATTTACTGTCAG...GGAATGGCTAAAAGATGAAGGGATAAAGGAGAGCGGGGCTCCAAGAATGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR GCA 90 bp | CATCACTTTCTTCTTTCCCTTATTGTCCATCTCAGATCCCGAGTGCATTTTTGTTTGCTACTCCAGGACTaGCGGTGGAGCAGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HHFLLSLIVHLRSRVHFCLLLQD*RWSSWC Trigger: ACACCAGCTGCTCCACCGGCAGTCCTGGAGTAGCAA...ACAAAAATGCACTCGGGATCTGAGATGGACAATAAGGGAAAGAAGAAAGTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| 3UTR CAA 72 bp | GTCCATCTCAGATCCCGAGTGCATTTTTGTCTGTTCTaGTTATGGGGTGATCAATCACTTTCCCTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VHLRSRVHFCLF*LWGDQSLSLLS Trigger: AGAAAGAAGGGAAAGTGATTGATCACCCCATAACAAGAACAGACAAAAATGCACTCGGGATCTGAGATGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | CGAGCAATAGCGACGCGCCCCAGGCGGCCACCGCCATCGCCAGCGTaGGAGCGCGACTGGCGGCGGGTGCGGGTCCACGACGGGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: RAIATRPRRPPPSPA*ERDWRRVRVHDGPW Trigger: CCATGGCCCGTCGTGGACCCGCACCCGCCGCCAGTCGCGCTCGCACGCTGGCGATGGCGGTGGCCGCCTGGGGCGCGTCGCTATTGCTCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | AGCACCACGCTAAGGGTACGAAGCAGGGCCAGCGACCGCGGCGTGTaGCGGGATCGCGAGGACGAGGTGGCCCTGCGGGACCCAGGACCC | + |
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Preference number: 5 (lower is better) Translates to: STTLRVRSRASDRGV*RDREDEVALRDPGP Trigger: GGGTCCTGGGTCCCGCAGGGCCACCTCGTCCTCGCGATCCCGGCACACGCCGCGGTCGCTGGCCCTGCTTCGTACCCTTAGCGTGGTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | CTCCAGCACAATGAAGGCACACACAGCCAGACACACTGCGGCGTCTaGGCGCAGGCCGGCGCCGGGCTGGTAGCGCGCCCCGCGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: LQHNEGTHSQTHCGV*AQAGAGLVARPAEL Trigger: AAGCTCCGCGGGGCGCGCTACCAGCCCGGCGCCGGCCTGCGCGCAGACGCCGCAGTGTGTCTGGCTGTGTGTGCCTTCATTGTGCTGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 90 bp | GCGCGACTGGCGGCGGGTGCGGGTCCACGACGGGCCATGGTAAGGTaGCGCTCTAAAGCAATGGCCAAGAGGCTCAGCACCGACGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: ARLAAGAGPRRAMVR*RSKAMAKRLSTDAA Trigger: CGCCGCGTCGGTGCTGAGCCTCTTGGCCATTGCTTTAGAGCGCCACCTTACCATGGCCCGTCGTGGACCCGCACCCGCCGCCAGTCGCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 90 bp | GGCCCGGCAGCACTGGGGGATCGCTGCAAGCTGTTGGAGGAGTCTTaGTTGCAGGGTCCGCGGCCACAGCAGAGCAGCCGCAGGAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: GPAALGDRCKLLEES*LQGPRPQQSSRRSA Trigger: CGCGCTCCTGCGGCTGCTCTGCTGTGGCCGCGGACCCTGCAACCAAGACTCCTCCAACAGCTTGCAGCGATCCCCCAGTGCTGCCGGGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | AGCCAAGTTCTCCAGCACAATGAAGGCACACACAGCCAGACACACTaGGGCGTCTGCGCGCAGGCCGGCGCCGGGCTGGTAGCGCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SQVLQHNEGTHSQTH*GVCAQAGAGLVARP Trigger: GGGGCGCGCTACCAGCCCGGCGCCGGCCTGCGCGCAGACGCCGCAGTGTGTCTGGCTGTGTGTGCCTTCATTGTGCTGGAGAACTTGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | CGGCAGCACTGGGGGATCGCTGCAAGCTGTTGGAGGAGTCTTGGTTaGAGGGTCCGCGGCCACAGCAGAGCAGCCGCAGGAGCGCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQHWGIAASCWRSLG*RVRGHSRAAAGARG Trigger: GCCACGCGCTCCTGCGGCTGCTCTGCTGTGGCCGCGGACCCTGCAACCAAGACTCCTCCAACAGCTTGCAGCGATCCCCCAGTGCTGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 90 bp | CACCACCGGAAGGCCCGGCAGCACTGGGGGATCGCTGCAAGCTGTTaGAGGAGTCTTGGTTGCAGGGTCCGCGGCCACAGCAGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HHRKARQHWGIAASC*RSLGCRVRGHSRAA Trigger: GGCTGCTCTGCTGTGGCCGCGGACCCTGCAACCAAGACTCCTCCAACAGCTTGCAGCGATCCCCCAGTGCTGCCGGGCCTTCCGGTGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | CGCCCGCAGGCGACGCGCGTTGGCCCGCACCTGACAGTAAATCCTTaGATAGAGCGCACAGATGGCAGCCAGGATGCCCAGGAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPQATRVGPHLTVNP*IERTDGSQDAQEGQ Trigger: CTGGCCTTCCTGGGCATCCTGGCTGCCATCTGTGCGCTCTATGCAAGGATTTACTGTCAGGTGCGGGCCAACGCGCGTCGCCTGCGGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | TTCAGCAGCGAGTTAGCCATGGCTAGACCCAGGAAGGGATCGGCCTaGAGGAGCACGGGACACGCGCGGGCTGGGCACGCGACATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: FSSELAMARPRKGSA*RSTGHARAGHATSS Trigger: ACTGGATGTCGCGTGCCCAGCCCGCGCGTGTCCCGTGCTCCTGCAGGCCGATCCCTTCCTGGGTCTAGCCATGGCTAACTCGCTGCTGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS TCA 90 bp | GGATGTTGGTGGCGTAGGCCGCCCCGGCGAGCAGGTCCGACAAAGTaGGGCTGCCAAGGAGCAGAAACATGGGCGCATGGAAGCGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCWWRRPPRRAGPTK*GCQGAETWAHGSEG Trigger: ACCCTCGCTTCCATGCGCCCATGTTTCTGCTCCTTGGCAGCCTCACTTTGTCGGACCTGCTCGCCGGGGCGGCCTACGCCACCAACATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS TCA 90 bp | GGTGGCGGACCAGCACCAAGAGCACAGCCAAGTTCTCCAGCACAATaGAGGCACACACAGCCAGACACACTGCGGCGTCTGCGCGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GGGPAPRAQPSSPAQ*RHTQPDTLRRLRAG Trigger: GCCTGCGCGCAGACGCCGCAGTGTGTCTGGCTGTGTGTGCCTTCATTGTGCTGGAGAACTTGGCTGTGCTCTTGGTGCTGGTCCGCCACC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS TCA 90 bp | GGAGCAGCTGGTGTCCACCCCGTCCTGCTGGGGAGACAAGTGTTCTaGTGGGCTAGAGCTGCGATCCAAGGTTGGTGGCAGGCAGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GAAGVHPVLLGRQVF*WARAAIQGWWQAAS Trigger: CGACGCTGCCTGCCACCAACCTTGGATCGCAGCTCTAGCCCATCAGAACACTTGTCTCCCCAGCAGGACGGGGTGGACACCAGCTGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | GCTACTCCAGGACTGCCGGTGGAGCAGCTGGTGTCCACCCCGTCCTaGTGGGGAGACAAGTGTTCTGATGGGCTAGAGCTGCGATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ATPGLPVEQLVSTPS*WGDKCSDGLELRSK Trigger: CTTGGATCGCAGCTCTAGCCCATCAGAACACTTGTCTCCCCAGCAGGACGGGGTGGACACCAGCTGCTCCACCGGCAGTCCTGGAGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 90 bp | ACTCCAGGACTGCCGGTGGAGCAGCTGGTGTCCACCCCGTCCTGCTaGGGAGACAAGTGTTCTGATGGGCTAGAGCTGCGATCCAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: TPGLPVEQLVSTPSC*GDKCSDGLELRSKV Trigger: AACCTTGGATCGCAGCTCTAGCCCATCAGAACACTTGTCTCCCCAGCAGGACGGGGTGGACACCAGCTGCTCCACCGGCAGTCCTGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 90 bp | GTGAGGCTGCCAAGGAGCAGAAACATGGGCGCATGGAAGCGAGGGTaGCGGACCAGCACCAAGAGCACAGCCAAGTTCTCCAGCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: VRLPRSRNMGAWKRG*RTSTKSTAKFSSTM Trigger: CATTGTGCTGGAGAACTTGGCTGTGCTCTTGGTGCTGGTCCGCCACCCTCGCTTCCATGCGCCCATGTTTCTGCTCCTTGGCAGCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS-3UTR CAA 90 bp | TGTCCACAGCTCTGTTTCCTCTGTAGCCAGCCACTACTCCTGCCAGCCCTTAGCAGCTGCGATCCAAGGTaGGTGGCAGGCAGCGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPQLCFLCSQPLLLPALSSCDPR*VAGSVA Trigger: TGCGACGCTGCCTGCCACCAACCTTGGATCGCAGCT...GCTAAGGGCTGGCAGGAGTAGTGGCTGGCTACAGAGGAAACAGAGCTGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 90 bp | CCTGACAGTAAATCCTTGCATAGAGCGCACAGATGGCAGCCAGGATaGCCAGGAAGGCCAGCACGCAGAAGAGCACATAGGCCTTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PDSKSLHRAHRWQPG*PGRPARRRAHRPWR Trigger: ACGCCAAGGCCTATGTGCTCTTCTGCGTGCTGGCCTTCCTGGGCATCCTGGCTGCCATCTGTGCGCTCTATGCAAGGATTTACTGTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 72 bp | GCGGCGTGTGCCGGGATCGCGAGGACGAGGTGGCCCTaGGGGACCCAGGACCCGCCCGCAGGCGACGCGCGT | + |
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Preference number: 6 (lower is better) Translates to: AACAGIARTRWP*GTQDPPAGDAR Trigger: ACGCGCGTCGCCTGCGGGCGGGTCCTGGGTCCCGCAGGGCCACCTCGTCCTCGCGATCCCGGCACACGCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 72 bp | CGCCATCGCCAGCGTGCGAGCGCGACTGGCGGCGGGTaGGGGTCCACGACGGGCCATGGTAAGGTGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RHRQRASATGGG*GSTTGHGKVAL Trigger: GAGCGCCACCTTACCATGGCCCGTCGTGGACCCGCACCCGCCGCCAGTCGCGCTCGCACGCTGGCGATGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CAA 90 bp | CCGGCAGCACTGGGGGATCGCTGCAAGCTGTTGGAGGAGTCTTGGTaGCAGGGTCCGCGGCCACAGCAGAGCAGCCGCAGGAGCGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PAALGDRCKLLEESW*QGPRPQQSSRRSAW Trigger: CCACGCGCTCCTGCGGCTGCTCTGCTGTGGCCGCGGACCCTGCAACCAAGACTCCTCCAACAGCTTGCAGCGATCCCCCAGTGCTGCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 72 bp | GAGTTAGCCATGGCTAGACCCAGGAAGGGATCGGCCTaGAGGAGCACGGGACACGCGCGGGCTGGGCACGCG | + |
|
Preference number: 6 (lower is better) Translates to: ELAMARPRKGSA*RSTGHARAGHA Trigger: CGCGTGCCCAGCCCGCGCGTGTCCCGTGCTCCTGCAGGCCGATCCCTTCCTGGGTCTAGCCATGGCTAACTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 72 bp | GGCTCCGGTTGGCGGTTGCTACTCCAGGACTGCCGGTaGAGCAGCTGGTGTCCACCCCGTCCTGCTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSGWRLLLQDCR*SSWCPPRPAGE Trigger: CTCCCCAGCAGGACGGGGTGGACACCAGCTGCTCCACCGGCAGTCCTGGAGTAGCAACCGCCAACCGGAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 72 bp | CTCCAGCACAATGAAGGCACACACAGCCAGACACACTaGGGCGTCTGCGCGCAGGCCGGCGCCGGGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LQHNEGTHSQTH*GVCAQAGAGLV Trigger: TACCAGCCCGGCGCCGGCCTGCGCGCAGACGCCGCAGTGTGTCTGGCTGTGTGTGCCTTCATTGTGCTGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 72 bp | TGCGGGACCCAGGACCCGCCCGCAGGCGACGCGCGTTaGCCCGCACCTGACAGTAAATCCTTGCATAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CGTQDPPAGDAR*PAPDSKSLHRA Trigger: CGCTCTATGCAAGGATTTACTGTCAGGTGCGGGCCAACGCGCGTCGCCTGCGGGCGGGTCCTGGGTCCCGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS TCA 72 bp | CACGCGCAAACCAAAGCGCAGGCGACAGGCGCAGCGTaGGCGGCCCGGACAGTAGGATGTTGGTGGCGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: HAQTKAQATGAA*AARTVGCWWRR Trigger: CCTACGCCACCAACATCCTACTGTCCGGGCCGCTCACGCTGCGCCTGTCGCCTGCGCTTTGGTTTGCGCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 72 bp | CCACCACCGGAAGGCCCGGCAGCACTGGGGGATCGCTaGAAGCTGTTGGAGGAGTCTTGGTTGCAGGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPPEGPAALGDR*KLLEESWLQGP Trigger: CGGACCCTGCAACCAAGACTCCTCCAACAGCTTGCAGCGATCCCCCAGTGCTGCCGGGCCTTCCGGTGGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 72 bp | GCGGCGGGTGCGGGTCCACGACGGGCCATGGTAAGGTaGCGCTCTAAAGCAATGGCCAAGAGGCTCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: AAGAGPRRAMVR*RSKAMAKRLST Trigger: GGTGCTGAGCCTCTTGGCCATTGCTTTAGAGCGCCACCTTACCATGGCCCGTCGTGGACCCGCACCCGCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 72 bp | AGCGTCGCAGGCCACCACCGGAAGGCCCGGCAGCACTaGGGGATCGCTGCAAGCTGTTGGAGGAGTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SVAGHHRKARQH*GIAASCWRSLG Trigger: ACCAAGACTCCTCCAACAGCTTGCAGCGATCCCCCAGTGCTGCCGGGCCTTCCGGTGGTGGCCTGCGACGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CAA 72 bp | CTGGGGGATCGCTGCAAGCTGTTGGAGGAGTCTTGGTaGCAGGGTCCGCGGCCACAGCAGAGCAGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGDRCKLLEESW*QGPRPQQSSRR Trigger: CCTGCGGCTGCTCTGCTGTGGCCGCGGACCCTGCAACCAAGACTCCTCCAACAGCTTGCAGCGATCCCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CAA 90 bp | CCGCCCGCAGGCGACGCGCGTTGGCCCGCACCTGACAGTAAATCCTaGCATAGAGCGCACAGATGGCAGCCAGGATGCCCAGGAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPAGDARWPAPDSKS*HRAHRWQPGCPGRP Trigger: TGGCCTTCCTGGGCATCCTGGCTGCCATCTGTGCGCTCTATGCAAGGATTTACTGTCAGGTGCGGGCCAACGCGCGTCGCCTGCGGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS TCA 72 bp | TGGCGTAGGCCGCCCCGGCGAGCAGGTCCGACAAAGTaGGGCTGCCAAGGAGCAGAAACATGGGCGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: WRRPPRRAGPTK*GCQGAETWAHG Trigger: TCCATGCGCCCATGTTTCTGCTCCTTGGCAGCCTCACTTTGTCGGACCTGCTCGCCGGGGCGGCCTACGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS GCA 72 bp | GTCTGTAGCAGTAGGCACCAGGCTCCGGTTGGCGGTTaGTACTCCAGGACTGCCGGTGGAGCAGCTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VCSSRHQAPVGG*YSRTAGGAAGV Trigger: GACACCAGCTGCTCCACCGGCAGTCCTGGAGTAGCAACCGCCAACCGGAGCCTGGTGCCTACTGCTACAGAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 72 bp | CTGCCGGTGGAGCAGCTGGTGTCCACCCCGTCCTGCTaGGGAGACAAGTGTTCTGATGGGCTAGAGCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LPVEQLVSTPSC*GDKCSDGLELR Trigger: TCGCAGCTCTAGCCCATCAGAACACTTGTCTCCCCAGCAGGACGGGGTGGACACCAGCTGCTCCACCGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 72 bp | TGGCGGTTGCTACTCCAGGACTGCCGGTGGAGCAGCTaGTGTCCACCCCGTCCTGCTGGGGAGACAAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WRLLLQDCRWSS*CPPRPAGETSV Trigger: AACACTTGTCTCCCCAGCAGGACGGGGTGGACACCAGCTGCTCCACCGGCAGTCCTGGAGTAGCAACCGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CAA 72 bp | GGCGACGCGCGTTGGCCCGCACCTGACAGTAAATCCTaGCATAGAGCGCACAGATGGCAGCCAGGATGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GDARWPAPDSKS*HRAHRWQPGCP Trigger: TGGGCATCCTGGCTGCCATCTGTGCGCTCTATGCAAGGATTTACTGTCAGGTGCGGGCCAACGCGCGTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS TCA 72 bp | GGTGTCCACCCCGTCCTGCTGGGGAGACAAGTGTTCTaGTGGGCTAGAGCTGCGATCCAAGGTTGGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GVHPVLLGRQVF*WARAAIQGWWQ Trigger: CTGCCACCAACCTTGGATCGCAGCTCTAGCCCATCAGAACACTTGTCTCCCCAGCAGGACGGGGTGGACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS CCA 72 bp | CCAAGGAGCAGAAACATGGGCGCATGGAAGCGAGGGTaGCGGACCAGCACCAAGAGCACAGCCAAGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRSRNMGAWKRG*RTSTKSTAKFS Trigger: GGAGAACTTGGCTGTGCTCTTGGTGCTGGTCCGCCACCCTCGCTTCCATGCGCCCATGTTTCTGCTCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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| CDS TCA 72 bp | CCAGCACCAAGAGCACAGCCAAGTTCTCCAGCACAATaGAGGCACACACAGCCAGACACACTGCGGCGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAPRAQPSSPAQ*RHTQPDTLRRL Trigger: CAGACGCCGCAGTGTGTCTGGCTGTGTGTGCCTTCATTGTGCTGGAGAACTTGGCTGTGCTCTTGGTGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122088.2 |
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