RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for S1PR4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044199

Ensembl transcript IDs: ENSMUST00000053646.7

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGGAGTGGGTGGCTCTATCCTCCCCACACAGAGACAGAGAACCTaGACTGGAGGAGGGAGGCCATCGGGGGCAGGCTGCTTGTCCCAA +
Preference number: 1 (lower is better)
Translates to: PGVGGSILPTQRQRT*TGGGRPSGAGCLSQ
Trigger: TTGGGACAAGCAGCCTGCCCCCGATGGCCTCCCTCCTCCAGTTCAGGTTCTCTGTCTCTGTGTGGGGAGGATAGAGCCACCCACTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR TCA 90 bp TATCACATGGTAGGGTCCACAGCTCCCTGCCACAGCATATCTCCGTaGTTCAGAACAGGAAGGGCGAGGCTGCGGGGTTACAGGACCAGT +
Preference number: 1 (lower is better)
Translates to: YHMVGSTAPCHSISP*FRTGRARLRGYRTS
Trigger: ACTGGTCCTGTAACCCCGCAGCCTCGCCCTTCCTGTTCTGAATCACGGAGATATGCTGTGGCAGGGAGCTGTGGACCCTACCATGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR TCA 90 bp GTGGGTATGACCAGGAGACACATTACAGTAGCCTGGGCATTGACCTaGACACATGTGACTAAGACAGAACCACAAAGCTCTGTCCTGTCC +
Preference number: 1 (lower is better)
Translates to: VGMTRRHITVAWALT*THVTKTEPQSSVLS
Trigger: GGACAGGACAGAGCTTTGTGGTTCTGTCTTAGTCACATGTGTTCAGGTCAATGCCCAGGCTACTGTAATGTGTCTCCTGGTCATACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR-3UTR CCA 90 bp ACTGGAGGAGGGAGGCCATCGGGGGCAGGCTGCTTGTCCCAATGTAGAAGTCATCAGACTCACTGGCTCTaGCTCCAGCCACTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: TGGGRPSGAGCLSQCRSHQTHWL*LQPLSA
Trigger: GGCAGAGAGTGGCTGGAGCCAGAGCCAGTGAGTCTG...ATGACTTCTACATTGGGACAAGCAGCCTGCCCCCGATGGCCTCCCTCCTCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR CAA 90 bp CCCGGGGCTTGCTGTCATGTTCTCAGTCACCATCAGGCAAGGTTCTaGTGTCCTGTCCCTTCTCACCTCGTCTGGGAGGGCCTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: PGACCHVLSHHQARF*CPVPSHLVWEGLLS
Trigger: ACTGAGCAGGCCCTCCCAGACGAGGTGAGAAGGGACAGGACACAAGAACCTTGCCTGATGGTGACTGAGAACATGACAGCAAGCCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR-3UTR GCA 90 bp ACTGGAGGAGGGAGGCCATCGGGGGCAGGCTGCTTGTCCCAATGTAGAAGTCATGCTCCAGCCACTCTCTaGCAAACATTCATCACGGGG +
Preference number: 2 (lower is better)
Translates to: TGGGRPSGAGCLSQCRSHAPATL*QTFITG
Trigger: CCCCGTGATGAATGTTTGGCAGAGAGTGGCTGGAGC...ATGACTTCTACATTGGGACAAGCAGCCTGCCCCCGATGGCCTCCCTCCTCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR-3UTR CCA 90 bp GGTGTGCCCTCCAGGCCCCCTTTCATTCTTAAACACGTCAAGTTGCCCTCAAACGGAGGGCCTGCTCAGTaGGCAACTGGCTGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: GVPSRPPFILKHVKLPSNGGPAQ*ATGWSK
Trigger: CTTGGACCAGCCAGTTGCCCACTGAGCAGGCCCTCC...GTTTGAGGGCAACTTGACGTGTTTAAGAATGAAAGGGGGCCTGGAGGGCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR-3UTR TCA 90 bp CATCCCAGCACACCCCCAAAGCACTGTATACCAGTGGGTATGACCAGGAGACACGCCTGGGCATTGACCTaGACACATGTGACTAAGACA +
Preference number: 2 (lower is better)
Translates to: HPSTPPKHCIPVGMTRRHAWALT*THVTKT
Trigger: TGTCTTAGTCACATGTGTTCAGGTCAATGCCCAGGC...GTGTCTCCTGGTCATACCCACTGGTATACAGTGCTTTGGGGGTGTGCTGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR-3UTR GCA 90 bp GGTGTGCCCTCCAGGCCCCCTTTCATTCTTAAACACGTCAAGTTGCCCTCAAACAAGGAACCCGGGGCTTaGTGTCATGTTCTCAGTCAC +
Preference number: 2 (lower is better)
Translates to: GVPSRPPFILKHVKLPSNKEPGA*CHVLSH
Trigger: GTGACTGAGAACATGACAGCAAGCCCCGGGTTCCTT...GTTTGAGGGCAACTTGACGTGTTTAAGAATGAAAGGGGGCCTGGAGGGCACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR-3UTR TCA 90 bp GGTGTGCCCTCCAGGCCCCCTTTCATTCTTAAACACGTCAAGTTGCCCTCAAACGTATACCAGTGGGTATaGCCAGGAGACACATTACAG +
Preference number: 2 (lower is better)
Translates to: GVPSRPPFILKHVKLPSNVYQWV*PGDTLQ
Trigger: CTGTAATGTGTCTCCTGGTCATACCCACTGGTATAC...GTTTGAGGGCAACTTGACGTGTTTAAGAATGAAAGGGGGCCTGGAGGGCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR CAA 90 bp GGAGGTTTCGTTCATTTTAATGAATTTTATGCAGCCATGCATGGCTaGCAGCTGCACTATCACATGGTAGGGTCCACAGCTCCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: GGFVHFNEFYAAMHG*QLHYHMVGSTAPCH
Trigger: GTGGCAGGGAGCTGTGGACCCTACCATGTGATAGTGCAGCTGCAAGCCATGCATGGCTGCATAAAATTCATTAAAATGAACGAAACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR CCA 72 bp GGGGAGGGGCCCTTCAAGGCCCAGACTCACTGGCTCTaGCTCCAGCCACTCTCTGCCAAACATTCATCACGG +
Preference number: 3 (lower is better)
Translates to: GEGPFKAQTHWL*LQPLSAKHSSR
Trigger: CCGTGATGAATGTTTGGCAGAGAGTGGCTGGAGCCAGAGCCAGTGAGTCTGGGCCTTGAAGGGCCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR TCA 72 bp ACAGGAAGGGCGAGGCTGCGGGGTTACAGGACCAGTTaGGATTGCCCCAGACCTGGAGTGGGTGGCTCTATC +
Preference number: 3 (lower is better)
Translates to: TGRARLRGYRTS*DCPRPGVGGSI
Trigger: GATAGAGCCACCCACTCCAGGTCTGGGGCAATCTCAACTGGTCCTGTAACCCCGCAGCCTCGCCCTTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR CCA 72 bp GCAAGGTTCTTGTGTCCTGTCCCTTCTCACCTCGTCTaGGAGGGCCTGCTCAGTGGGCAACTGGCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: ARFLCPVPSHLV*EGLLSGQLAGP
Trigger: TGGACCAGCCAGTTGCCCACTGAGCAGGCCCTCCCAGACGAGGTGAGAAGGGACAGGACACAAGAACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR CCA 72 bp CTCTATCCTCCCCACACAGAGACAGAGAACCTGAACTaGAGGAGGGAGGCCATCGGGGGCAGGCTGCTTGTC +
Preference number: 3 (lower is better)
Translates to: LYPPHTETENLN*RREAIGGRLLV
Trigger: GACAAGCAGCCTGCCCCCGATGGCCTCCCTCCTCCAGTTCAGGTTCTCTGTCTCTGTGTGGGGAGGATAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR CCA 72 bp CAGGACCAGTTGAGATTGCCCCAGACCTGGAGTGGGTaGCTCTATCCTCCCCACACAGAGACAGAGAACCTG +
Preference number: 3 (lower is better)
Translates to: QDQLRLPQTWSG*LYPPHTETENL
Trigger: CAGGTTCTCTGTCTCTGTGTGGGGAGGATAGAGCCACCCACTCCAGGTCTGGGGCAATCTCAACTGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR-3UTR CAA 90 bp GAGTGGGTGGCTCTATCCTCCCCACACAGAGACAGAGAACCTGAACTGGAGGAGGAAGGAACCCGGGGCTaGCTGTCATGTTCTCAGTCA +
Preference number: 3 (lower is better)
Translates to: EWVALSSPHRDREPELEEEGTRG*LSCSQS
Trigger: TGACTGAGAACATGACAGCAAGCCCCGGGTTCCTTC...CTCCTCCAGTTCAGGTTCTCTGTCTCTGTGTGGGGAGGATAGAGCCACCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR TCA 72 bp TGTCCCAATGTAGAAGTCATTGAGAAGAGGGGTGGATaGCAGACTGGTGTGCCCTCCAGGCCCCCTTTCATT +
Preference number: 3 (lower is better)
Translates to: CPNVEVIEKRGG*QTGVPSRPPFI
Trigger: AATGAAAGGGGGCCTGGAGGGCACACCAGTCTGTCATCCACCCCTCTTCTCAATGACTTCTACATTGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR-3UTR CAA 90 bp CAGCACACCCCCAAAGCACTGTATACCAGTGGGTATGACCAGGAGACACATTACCATCAGGCAAGGTTCTaGTGTCCTGTCCCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: QHTPKALYTSGYDQETHYHQARF*CPVPSH
Trigger: GTGAGAAGGGACAGGACACAAGAACCTTGCCTGATG...GTAATGTGTCTCCTGGTCATACCCACTGGTATACAGTGCTTTGGGGGTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR TCA 72 bp ACCAGGAGACACATTACAGTAGCCTGGGCATTGACCTaGACACATGTGACTAAGACAGAACCACAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: TRRHITVAWALT*THVTKTEPQSS
Trigger: AGAGCTTTGTGGTTCTGTCTTAGTCACATGTGTTCAGGTCAATGCCCAGGCTACTGTAATGTGTCTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR GCA 90 bp AGCTCTGTCCTGTCCATGGCCTCGGACATGGCACATCCCCTTTGCTGCCTGGGCGCTGTGGCCGCTGGCTaGCAGCCGGTGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SSVLSMASDMAHPLCCLGAVAAG*QPVAGL
Trigger: GAGTCCTGCCACCGGCTGGCAGCCAGCGGCCACAGC...GCCCAGGCAGCAAAGGGGATGTGCCATGTCCGAGGCCATGGACAGGACAGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp AGCTCTGTCCTGTCCATGGCCTCGGACATGGCACATCCCCTTTGCTGCCTGGGCACAATGAGGAGGCTGTaGCCGCTGGCTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SSVLSMASDMAHPLCCLGTMRRL*PLAASR
Trigger: CCGGCTGGCAGCCAGCGGCCACAGCCTCCTCATTGT...GCCCAGGCAGCAAAGGGGATGTGCCATGTCCGAGGCCATGGACAGGACAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR TCA 90 bp AGCTCTGTCCTGTCCATGGCCTCGGACATGGCACATCCCCTTTGCTGCCTGGGCCTGACAGCAGCACGTTaGCCACGTAGGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSVLSMASDMAHPLCCLGLTAAR*PRRPGL
Trigger: CAGGCCTGGCCTACGTGGTCAACGTGCTGCTGTCAG...GCCCAGGCAGCAAAGGGGATGTGCCATGTCCGAGGCCATGGACAGGACAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR TCA 90 bp TGGTGCAGGTCCACCCCCATCCCAGCACACCCCCAAAGCACTGTATACCAGTGGATGCGGCCAAGGCCATaGAGAGCAGGCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: WCRSTPIPAHPQSTVYQWMRPRP*RAGPPA
Trigger: TGCGGGAGGGCCTGCTCTTCATGGCCTTGGCCGCAT...CCACTGGTATACAGTGCTTTGGGGGTGTGCTGGGATGGGGGTGGACCTGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR GCA 90 bp CATCCCAGCACACCCCCAAAGCACTGTATACCAGTGGGTATGACCAGGAGACACCACCACCAGGCAACCTaGGGCCACCGACGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HPSTPPKHCIPVGMTRRHHHQAT*GHRRPP
Trigger: AGGGGGCCGTCGGTGGCCGCAGGTTGCCTGGTGGTG...GTGTCTCCTGGTCATACCCACTGGTATACAGTGCTTTGGGGGTGTGCTGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp TCCCCACACAGAGACAGAGAACCTGAACTGGAGGAGGGAGGCCATCGGGGGCAGACACACGGCTGGTCTTaGTGGCCCCACTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SPHRDREPELEEGGHRGQTHGWS*WPHSQP
Trigger: TGGCTGAGAGTGGGGCCACCAAGACCAGCCGTGTGT...CTGCCCCCGATGGCCTCCCTCCTCCAGTTCAGGTTCTCTGTCTCTGTGTGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR CAA 72 bp AAGGGCGAGGCTGCGGGGTTACAGGACCAGTTGAGATaGCCCCAGACCTGGAGTGGGTGGCTCTATCCTCCC +
Preference number: 4 (lower is better)
Translates to: KGEAAGLQDQLR*PQTWSGWLYPP
Trigger: GGGAGGATAGAGCCACCCACTCCAGGTCTGGGGCAATCTCAACTGGTCCTGTAACCCCGCAGCCTCGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp ACTGGAGGAGGGAGGCCATCGGGGGCAGGCTGCTTGTCCCAATGTAGAAGTCATTGGCGGCCAGCACCATaGCGTTCTCCAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: TGGGRPSGAGCLSQCRSHWRPAP*RSPAPP
Trigger: TGGTGGTGCTGGAGAACGCCATGGTGCTGGCCGCCA...ATGACTTCTACATTGGGACAAGCAGCCTGCCCCCGATGGCCTCCCTCCTCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp GTTCTCAGTCACCATCAGGCAAGGTTCTTGTGTCCTGTCCCTTCTCACCTCGTCCAGCCACCCGCACCATaGTGGCGAAGCGCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: VLSHHQARFLCPVPSHLVQPPAP*WRSARR
Trigger: CCGGCGAGCGCTTCGCCACCATGGTGCGGGTGGCTG...GACGAGGTGAGAAGGGACAGGACACAAGAACCTTGCCTGATGGTGACTGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR GCA 90 bp GTTCTCAGTCACCATCAGGCAAGGTTCTTGTGTCCTGTCCCTTCTCACCTCGTCGTAGCCTGCGGGACTTaGGGCGGGCAGGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: VLSHHQARFLCPVPSHLVVACGT*GGQEDV
Trigger: CACGTCCTCCTGCCCGCCGCAAGTCCCGCAGGCTAC...GACGAGGTGAGAAGGGACAGGACACAAGAACCTTGCCTGATGGTGACTGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp AGTCACCATCAGGCAAGGTTCTTGTGTCCTGTCCCTTCTCACCTCGTCTGGGAGCCGGTGGCAGGACTCTaGGGTCACCAGCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: SHHQARFLCPVPSHLVWEPVAGL*GHQRGP
Trigger: TGGTCCACGCTGGTGACCCCAGAGTCCTGCCACCGG...CTCCCAGACGAGGTGAGAAGGGACAGGACACAAGAACCTTGCCTGATGGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
3UTR CAA 72 bp AACAGGAAGGGCGAGGCTGCGGGGTTACAGGACCAGTaGAGATTGCCCCAGACCTGGAGTGGGTGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: NRKGEAAGLQDQ*RLPQTWSGWLY
Trigger: ATAGAGCCACCCACTCCAGGTCTGGGGCAATCTCAACTGGTCCTGTAACCCCGCAGCCTCGCCCTTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR TCA 90 bp ACTGGAGGAGGGAGGCCATCGGGGGCAGGCTGCTTGTCCCAATGTAGAAGTCATGAAGGTACGAGTCCCTaGCAGCAGCACGTTGACCAC +
Preference number: 4 (lower is better)
Translates to: TGGGRPSGAGCLSQCRSHEGTSP*QQHVDH
Trigger: GTGGTCAACGTGCTGCTGTCAGGGACTCGTACCTTC...ATGACTTCTACATTGGGACAAGCAGCCTGCCCCCGATGGCCTCCCTCCTCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp CCCCCTTTCATTCTTAAACACGTCAAGTTGCCCTCAAACAAATGGTGCAGGTCCGGAGGCTGTGGCCGCTaGCTGCCAGCCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPFILKHVKLPSNKWCRSGGCGR*LPAGGR
Trigger: CCTGCCACCGGCTGGCAGCCAGCGGCCACAGCCTCC...GGACCTGCACCATTTGTTTGAGGGCAACTTGACGTGTTTAAGAATGAAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp TGGTGCAGGTCCACCCCCATCCCAGCACACCCCCAAAGCACTGTATACCAGTGGCCACGCAGGTACTCCTaGGCCCAGACATTAGAACCA +
Preference number: 4 (lower is better)
Translates to: WCRSTPIPAHPQSTVYQWPRRYS*AQTLEP
Trigger: TGGTTCTAATGTCTGGGCCCAGGAGTACCTGCGTGG...CCACTGGTATACAGTGCTTTGGGGGTGTGCTGGGATGGGGGTGGACCTGCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp CATCCCAGCACACCCCCAAAGCACTGTATACCAGTGGGTATGACCAGGAGACACGGGAGCTGTCAGTGGTaGATGCACCGGAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HPSTPPKHCIPVGMTRRHGSCQW*MHRSGP
Trigger: AGGCCCACTCCGGTGCATCCACCACTGACAGCTCCC...GTGTCTCCTGGTCATACCCACTGGTATACAGTGCTTTGGGGGTGTGCTGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR GCA 90 bp AAACAAATGGTGCAGGTCCACCCCCATCCCAGCACACCCCCAAAGCACTGTATAGCTGTCAGTGGTGGATaGACCGGAGTGGGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: KQMVQVHPHPSTPPKHCIAVSGG*TGVGLG
Trigger: ACCGAGGCCCACTCCGGTGCATCCACCACTGACAGC...TATACAGTGCTTTGGGGGTGTGCTGGGATGGGGGTGGACCTGCACCATTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp TCAAACAAATGGTGCAGGTCCACCCCCATCCCAGCACACCCCCAAAGCACTGTAAGCCATACACACGGCTaGTCTTGGTGGCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: SNKWCRSTPIPAHPQSTVSHTHG*SWWPHS
Trigger: AGAGTGGGGCCACCAAGACCAGCCGTGTGTATGGCT...TACAGTGCTTTGGGGGTGTGCTGGGATGGGGGTGGACCTGCACCATTTGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp CCCCCTTTCATTCTTAAACACGTCAAGTTGCCCTCAAACAAATGGTGCAGGTCCAGAGGGGCAGCAGGCTaGAGCAGCGTGGGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: PPFILKHVKLPSNKWCRSRGAAG*SSVGRR
Trigger: GCGCCTTCCCACGCTGCTCCAGCCTGCTGCCCCTCT...GGACCTGCACCATTTGTTTGAGGGCAACTTGACGTGTTTAAGAATGAAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp TCAAACAAATGGTGCAGGTCCACCCCCATCCCAGCACACCCCCAAAGCACTGTATCCGAAAACTGTCCCTaGGCCTCAGGGAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SNKWCRSTPIPAHPQSTVSENCP*ASGSCQ
Trigger: CTGACAGCTCCCTGAGGCCCAGGGACAGTTTTCGGA...TACAGTGCTTTGGGGGTGTGCTGGGATGGGGGTGGACCTGCACCATTTGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp CAGCACACCCCCAAAGCACTGTATACCAGTGGGTATGACCAGGAGACACATTACCAGGCTGGAGCAGCGTaGGAAGGCGCACACACAGTT +
Preference number: 4 (lower is better)
Translates to: QHTPKALYTSGYDQETHYQAGAA*EGAHTV
Trigger: AACTGTGTGTGCGCCTTCCCACGCTGCTCCAGCCTG...GTAATGTGTCTCCTGGTCATACCCACTGGTATACAGTGCTTTGGGGGTGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR GCA 90 bp CAGCACACCCCCAAAGCACTGTATACCAGTGGGTATGACCAGGAGACACATTACGGACGTGGAGACTTCTaGCCATTGGCTCGGACCACT +
Preference number: 4 (lower is better)
Translates to: QHTPKALYTSGYDQETHYGRGDF*PLARTT
Trigger: AGTGGTCCGAGCCAATGGGCAGAAGTCTCCACGTCC...GTAATGTGTCTCCTGGTCATACCCACTGGTATACAGTGCTTTGGGGGTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR GCA 90 bp CCCCCTTTCATTCTTAAACACGTCAAGTTGCCCTCAAACAAATGGTGCAGGTCCTCCCGCAGGAACCAGTaGACCGGTGACAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PPFILKHVKLPSNKWCRSSRRNQ*TGDSWK
Trigger: CTTCCAGCTGTCACCGGTGCACTGGTTCCTGCGGGA...GGACCTGCACCATTTGTTTGAGGGCAACTTGACGTGTTTAAGAATGAAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CCA 90 bp TTCATTCTTAAACACGTCAAGTTGCCCTCAAACAAATGGTGCAGGTCCACCCCCGGACGCTGGAAATGCTaGACAGCGGCTCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: FILKHVKLPSNKWCRSTPGRWKC*TAALSS
Trigger: GGATGAGAGAGCCGCTGTCCAGCATTTCCAGCGTCC...GGGGGTGGACCTGCACCATTTGTTTGAGGGCAACTTGACGTGTTTAAGAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 90 bp CCCAGCGGCGGGACCGCATGTAGATGGCGATGGCGGCCAGCACCATaGCGTTCTCCAGCACCACCAGGCAACCTGCGGCCACCGACGGCC +
Preference number: 5 (lower is better)
Translates to: PSGGTACRWRWRPAP*RSPAPPGNLRPPTA
Trigger: GGCCGTCGGTGGCCGCAGGTTGCCTGGTGGTGCTGGAGAACGCCATGGTGCTGGCCGCCATCGCCATCTACATGCGGTCCCGCCGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 90 bp CTGTCCCTGGGCCTCAGGGAGCTGTCAGTGGTGGATGCACCGGAGTaGGCCTCGGTGATCCGGGTCAGGCAGTCTCCTGGACCTCGCAGA +
Preference number: 5 (lower is better)
Translates to: LSLGLRELSVVDAPE*ASVIRVRQSPGPRR
Trigger: TCTGCGAGGTCCAGGAGACTGCCTGACCCGGATCACCGAGGCCCACTCCGGTGCATCCACCACTGACAGCTCCCTGAGGCCCAGGGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS GCA 90 bp GCTGTGATTGTAGTGCAGGACAATGAGGAGGCTGTGGCCGCTGGCTaGCAGCCGGTGGCAGGACTCTGGGGTCACCAGCGTGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: AVIVVQDNEEAVAAG*QPVAGLWGHQRGPG
Trigger: ACCTGGTCCACGCTGGTGACCCCAGAGTCCTGCCACCGGCTGGCAGCCAGCGGCCACAGCCTCCTCATTGTCCTGCACTACAATCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS GCA 90 bp AGTCCGAAAACTGTCCCTGGGCCTCAGGGAGCTGTCAGTGGTGGATaGACCGGAGTGGGCCTCGGTGATCCGGGTCAGGCAGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SPKTVPGPQGAVSGG*TGVGLGDPGQAVSW
Trigger: CCAGGAGACTGCCTGACCCGGATCACCGAGGCCCACTCCGGTGCATCCACCACTGACAGCTCCCTGAGGCCCAGGGACAGTTTTCGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 90 bp CCAGTAGCCAGCACAGACCGATGCAGCCATACACACGGCTGGTCTTaGTGGCCCCACTCTCAGCCACCCGCACCATGGTGGCGAAGCGCT +
Preference number: 5 (lower is better)
Translates to: PVASTDRCSHTHGWS*WPHSQPPAPWWRSA
Trigger: AGCGCTTCGCCACCATGGTGCGGGTGGCTGAGAGTGGGGCCACCAAGACCAGCCGTGTGTATGGCTGCATCGGTCTGTGCTGGCTACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS TCA 90 bp GACCCCAGCACACCACAAAGGCCACCAAGATCATCAGCACGGTGTTaGGTAGCCTGCGGGACTTGCGGCGGGCAGGAGGACGTGGAGACT +
Preference number: 5 (lower is better)
Translates to: DPSTPQRPPRSSARC*VACGTCGGQEDVET
Trigger: AGTCTCCACGTCCTCCTGCCCGCCGCAAGTCCCGCAGGCTACTCAACACCGTGCTGATGATCTTGGTGGCCTTTGTGGTGTGCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CAA 90 bp ACTGGAGGAGGGAGGCCATCGGGGGCAGGCTGCTTGTCCCAATGTAGAAGTCATTACACACGGCTGGTCTaGGTGGCCCCACTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TGGGRPSGAGCLSQCRSHYTRLV*VAPLSA
Trigger: GGCTGAGAGTGGGGCCACCAAGACCAGCCGTGTGTA...ATGACTTCTACATTGGGACAAGCAGCCTGCCCCCGATGGCCTCCCTCCTCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 90 bp AACACGGCCAGGGCCAGGATCCAGTCCATGCCACGCAGGTACTCCTaGGCCCAGACATTAGAACCAAAGATGTCAGCCAGGAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: NTARARIQSMPRRYS*AQTLEPKMSARSRP
Trigger: TGGCCTGCTCCTGGCTGACATCTTTGGTTCTAATGTCTGGGCCCAGGAGTACCTGCGTGGCATGGACTGGATCCTGGCCCTGGCCGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS TCA 90 bp CTGCACCTCACGGCTGCGGAAGGAGTAGATGAGAGGATTAATGGCTaGGTTGAACACGGCCAGGGCCAGGATCCAGTCCATGCCACGCAG +
Preference number: 5 (lower is better)
Translates to: LHLTAAEGVDERING*VEHGQGQDPVHATQ
Trigger: CTGCGTGGCATGGACTGGATCCTGGCCCTGGCCGTGTTCAACTCAGCCATTAATCCTCTCATCTACTCCTTCCGCAGCCGTGAGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS TCA 90 bp GACGCTGGAAATGCTGGACAGCGGCTCTCTCATCCTGAAGCTGAGTaGCCGAGAAGTCCGAAAACTGTCCCTGGGCCTCAGGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: DAGNAGQRLSHPEAE*PRSPKTVPGPQGAV
Trigger: GACAGCTCCCTGAGGCCCAGGGACAGTTTTCGGACTTCTCGGTCACTCAGCTTCAGGATGAGAGAGCCGCTGTCCAGCATTTCCAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS-3UTR CAA 90 bp GGTGTGCCCTCCAGGCCCCCTTTCATTCTTAAACACGTCAAGTTGCCCTCAAACGGATTAATGGCTGAGTaGAACACGGCCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GVPSRPPFILKHVKLPSNGLMAE*NTARAR
Trigger: CCTGGCCCTGGCCGTGTTCAACTCAGCCATTAATCC...GTTTGAGGGCAACTTGACGTGTTTAAGAATGAAAGGGGGCCTGGAGGGCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS GCA 72 bp GTAGTGCAGGACAATGAGGAGGCTGTGGCCGCTGGCTaGCAGCCGGTGGCAGGACTCTGGGGTCACCAGCGT +
Preference number: 6 (lower is better)
Translates to: VVQDNEEAVAAG*QPVAGLWGHQR
Trigger: ACGCTGGTGACCCCAGAGTCCTGCCACCGGCTGGCAGCCAGCGGCCACAGCCTCCTCATTGTCCTGCACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 72 bp TCCCTAGCCCTCCACCGTCCTCAGAGCCCCCGCGGCTaGCCAGCCTGCCGCTGTGATTGTAGTGCAGGACAA +
Preference number: 6 (lower is better)
Translates to: SLALHRPQSPRG*PACRCDCSAGQ
Trigger: TTGTCCTGCACTACAATCACAGCGGCAGGCTGGCCAGCCGCGGGGGCTCTGAGGACGGTGGAGGGCTAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 72 bp GGGACCGCATGTAGATGGCGATGGCGGCCAGCACCATaGCGTTCTCCAGCACCACCAGGCAACCTGCGGCCA +
Preference number: 6 (lower is better)
Translates to: GTACRWRWRPAP*RSPAPPGNLRP
Trigger: TGGCCGCAGGTTGCCTGGTGGTGCTGGAGAACGCCATGGTGCTGGCCGCCATCGCCATCTACATGCGGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CAA 90 bp GCCAGTAGCCAGCACAGACCGATGCAGCCATACACACGGCTGGTCTaGGTGGCCCCACTCTCAGCCACCCGCACCATGGTGGCGAAGCGC +
Preference number: 6 (lower is better)
Translates to: ASSQHRPMQPYTRLV*VAPLSATRTMVAKR
Trigger: GCGCTTCGCCACCATGGTGCGGGTGGCTGAGAGTGGGGCCACCAAGACCAGCCGTGTGTATGGCTGCATCGGTCTGTGCTGGCTACTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS GCA 72 bp CGGGACTTGCGGCGGGCAGGAGGACGTGGAGACTTCTaGCCATTGGCTCGGACCACTCTAAAGATGGCCCCG +
Preference number: 6 (lower is better)
Translates to: RDLRRAGGRGDF*PLARTTLKMAP
Trigger: CGGGGCCATCTTTAGAGTGGTCCGAGCCAATGGGCAGAAGTCTCCACGTCCTCCTGCCCGCCGCAAGTCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 72 bp AGTACACCCAGCGGCGGGACCGCATGTAGATGGCGATaGCGGCCAGCACCATGGCGTTCTCCAGCACCACCA +
Preference number: 6 (lower is better)
Translates to: STPSGGTACRWR*RPAPWRSPAPP
Trigger: TGGTGGTGCTGGAGAACGCCATGGTGCTGGCCGCCATCGCCATCTACATGCGGTCCCGCCGCTGGGTGTACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 72 bp GGCAGTAGTACACCCAGCGGCGGGACCGCATGTAGATaGCGATGGCGGCCAGCACCATGGCGTTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GSSTPSGGTACR*RWRPAPWRSPA
Trigger: TGCTGGAGAACGCCATGGTGCTGGCCGCCATCGCCATCTACATGCGGTCCCGCCGCTGGGTGTACTACTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 72 bp AGCACAGACCGATGCAGCCATACACACGGCTGGTCTTaGTGGCCCCACTCTCAGCCACCCGCACCATGGTGG +
Preference number: 6 (lower is better)
Translates to: STDRCSHTHGWS*WPHSQPPAPWW
Trigger: CCACCATGGTGCGGGTGGCTGAGAGTGGGGCCACCAAGACCAGCCGTGTGTATGGCTGCATCGGTCTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 72 bp GTAGCCAGCACAGACCGATGCAGCCATACACACGGCTaGTCTTGGTGGCCCCACTCTCAGCCACCCGCACCA +
Preference number: 6 (lower is better)
Translates to: VASTDRCSHTHG*SWWPHSQPPAP
Trigger: TGGTGCGGGTGGCTGAGAGTGGGGCCACCAAGACCAGCCGTGTGTATGGCTGCATCGGTCTGTGCTGGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CAA 72 bp CAGCACAGACCGATGCAGCCATACACACGGCTGGTCTaGGTGGCCCCACTCTCAGCCACCCGCACCATGGTG +
Preference number: 6 (lower is better)
Translates to: QHRPMQPYTRLV*VAPLSATRTMV
Trigger: CACCATGGTGCGGGTGGCTGAGAGTGGGGCCACCAAGACCAGCCGTGTGTATGGCTGCATCGGTCTGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CAA 90 bp GGACCCCAGCACACCACAAAGGCCACCAAGATCATCAGCACGGTGTaGAGTAGCCTGCGGGACTTGCGGCGGGCAGGAGGACGTGGAGAC +
Preference number: 6 (lower is better)
Translates to: GPQHTTKATKIISTV*SSLRDLRRAGGRGD
Trigger: GTCTCCACGTCCTCCTGCCCGCCGCAAGTCCCGCAGGCTACTCAACACCGTGCTGATGATCTTGGTGGCCTTTGTGGTGTGCTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CAA 90 bp AAGGCCACCAAGATCATCAGCACGGTGTTGAGTAGCCTGCGGGACTaGCGGCGGGCAGGAGGACGTGGAGACTTCTGCCCATTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: KATKIISTVLSSLRD*RRAGGRGDFCPLAR
Trigger: CCGAGCCAATGGGCAGAAGTCTCCACGTCCTCCTGCCCGCCGCAAGTCCCGCAGGCTACTCAACACCGTGCTGATGATCTTGGTGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS TCA 72 bp ACACCACAAAGGCCACCAAGATCATCAGCACGGTGTTaGGTAGCCTGCGGGACTTGCGGCGGGCAGGAGGAC +
Preference number: 6 (lower is better)
Translates to: TPQRPPRSSARC*VACGTCGGQED
Trigger: GTCCTCCTGCCCGCCGCAAGTCCCGCAGGCTACTCAACACCGTGCTGATGATCTTGGTGGCCTTTGTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CAA 72 bp AAGATCATCAGCACGGTGTTGAGTAGCCTGCGGGACTaGCGGCGGGCAGGAGGACGTGGAGACTTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: KIISTVLSSLRD*RRAGGRGDFCP
Trigger: TGGGCAGAAGTCTCCACGTCCTCCTGCCCGCCGCAAGTCCCGCAGGCTACTCAACACCGTGCTGATGATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CAA 72 bp CACACCACAAAGGCCACCAAGATCATCAGCACGGTGTaGAGTAGCCTGCGGGACTTGCGGCGGGCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: HTTKATKIISTV*SSLRDLRRAGG
Trigger: TCCTCCTGCCCGCCGCAAGTCCCGCAGGCTACTCAACACCGTGCTGATGATCTTGGTGGCCTTTGTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS CCA 72 bp AGGGCCAGGATCCAGTCCATGCCACGCAGGTACTCCTaGGCCCAGACATTAGAACCAAAGATGTCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: RARIQSMPRRYS*AQTLEPKMSAR
Trigger: CCTGGCTGACATCTTTGGTTCTAATGTCTGGGCCCAGGAGTACCTGCGTGGCATGGACTGGATCCTGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS TCA 72 bp AATGCTGGACAGCGGCTCTCTCATCCTGAAGCTGAGTaGCCGAGAAGTCCGAAAACTGTCCCTGGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: NAGQRLSHPEAE*PRSPKTVPGPQ
Trigger: CTGAGGCCCAGGGACAGTTTTCGGACTTCTCGGTCACTCAGCTTCAGGATGAGAGAGCCGCTGTCCAGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7
CDS TCA 72 bp ACGGCTGCGGAAGGAGTAGATGAGAGGATTAATGGCTaGGTTGAACACGGCCAGGGCCAGGATCCAGTCCAT +
Preference number: 6 (lower is better)
Translates to: TAAEGVDERING*VEHGQGQDPVH
Trigger: ATGGACTGGATCCTGGCCCTGGCCGTGTTCAACTCAGCCATTAATCCTCTCATCTACTCCTTCCGCAGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053646.7