Pregenerated sensors for S1PR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067586Ensembl transcript IDs: ENSMUST00000087978.5
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCACCTGCCTTCCCTGGACCAGGGGTAGCGGCATCCGAAGGCAGTaGACCGTGTCAGCAGCTTGGTACATTCAGAAGGATGGAGCCCGC | + |
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Preference number: 1 (lower is better) Translates to: TTCLPWTRGSGIRRQ*TVSAAWYIQKDGAR Trigger: GCGGGCTCCATCCTTCTGAATGTACCAAGCTGCTGACACGGTGCACTGCCTTCGGATGCCGCTACCCCTGGTCCAGGGAAGGCAGGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 90 bp | AGGTTGCTCACTACCTTGGGCGAGCCCCAGGGTCTCTGGTGTCACTaGTTTCCGACCTTTGACCTTCAGGGTGAGGGTTGGATGCACCCG | + |
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Preference number: 1 (lower is better) Translates to: RLLTTLGEPQGLWCH*FPTFDLQGEGWMHP Trigger: CGGGTGCATCCAACCCTCACCCTGAAGGTCAAAGGTCGGAAACCAGTGACACCAGAGACCCTGGGGCTCGCCCAAGGTAGTGAGCAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR TCA 90 bp | CCGCAACAGATAAGTCACATCCAAGTCCAGGCTGAAATGCGTTGGTaGCTCCTTGGGTCTCCTCCTCAGGAGATACCACACAGTCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: PQQISHIQVQAEMRW*LLGSPPQEIPHSLA Trigger: GGCCAGACTGTGTGGTATCTCCTGAGGAGGAGACCCAAGGAGTCACCAACGCATTTCAGCCTGGACTTGGATGTGACTTATCTGTTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR TCA 90 bp | ACCAGTGCAAGGGCACTGGGAAGGGGACATGACCTTATCACATGCTaGACCTGGGACAGCAGTGTGGGCAGGTTTGGACCAATGATGTGT | + |
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Preference number: 1 (lower is better) Translates to: TSARALGRGHDLITC*TWDSSVGRFGPMMC Trigger: ACACATCATTGGTCCAAACCTGCCCACACTGCTGTCCCAGGTTCAGCATGTGATAAGGTCATGTCCCCTTCCCAGTGCCCTTGCACTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR GCA 90 bp | TCTGCTGGGAAATGGCTCCCCTGGGATGCCCTGTGCCTACGTAAATaGCACAGAGGGCAGTTTGTGCCTATAACCATGACAGGAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: SAGKWLPWDALCLRK*HRGQFVPITMTGGT Trigger: TGTTCCTCCTGTCATGGTTATAGGCACAAACTGCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR TCA 90 bp | AGCTATGAGTTAGAACACCAGTGCAAGGGCACTGGGAAGGGGACATaGCCTTATCACATGCTGAACCTGGGACAGCAGTGTGGGCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: SYELEHQCKGTGKGT*PYHMLNLGQQCGQV Trigger: AACCTGCCCACACTGCTGTCCCAGGTTCAGCATGTGATAAGGTCATGTCCCCTTCCCAGTGCCCTTGCACTGGTGTTCTAACTCATAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 90 bp | CCGAAGGCAGTGCACCGTGTCAGCAGCTTGGTACATTCAGAAGGATaGAGCCCGCAACAGATAAGTCACATCCAAGTCCAGGCTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: PKAVHRVSSLVHSEG*SPQQISHIQVQAEM Trigger: CATTTCAGCCTGGACTTGGATGTGACTTATCTGTTGCGGGCTCCATCCTTCTGAATGTACCAAGCTGCTGACACGGTGCACTGCCTTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 90 bp | CCAACGCACCCACCTTTCATCTGTGTGCCCTGTGGGCGGAATCCTTaGGGAGGGGATGTTCAGAGGTGTCTTCTACGCATTTTCTTTACA | + |
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Preference number: 1 (lower is better) Translates to: PTHPPFICVPCGRNP*GGDVQRCLLRIFFT Trigger: TGTAAAGAAAATGCGTAGAAGACACCTCTGAACATCCCCTCCCCAAGGATTCCGCCCACAGGGCACACAGATGAAAGGTGGGTGCGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 90 bp | ACATTAACCTCTGGCCTCTCCTGCATGCACAATAGTGTACATGGGTaGGCACACACATACACACACTCACCACCGCTACCACCACCACCA | + |
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Preference number: 1 (lower is better) Translates to: TLTSGLSCMHNSVHG*AHTYTHSPPLPPPP Trigger: TGGTGGTGGTGGTAGCGGTGGTGAGTGTGTGTATGTGTGTGCCCACCCATGTACACTATTGTGCATGCAGGAGAGGCCAGAGGTTAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR GCA 90 bp | GAGAGCACCTTGCCTCTCCTTAGGAGTTCTTCCTTTAGTGGTGCCTaGATTCCGAGAGATCCCGGCTGGCTTTTCTGTGGCTTTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: ESTLPLLRSSSFSGA*IPRDPGWLFCGFQK Trigger: TTTCTGAAAGCCACAGAAAAGCCAGCCGGGATCTCTCGGAATGCAGGCACCACTAAAGGAAGAACTCCTAAGGAGAGGCAAGGTGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR GCA 90 bp | CAAATCATAGGATCTGCTGGGAAATGGCTCCCCTGGGATGCCCTGTaGCTACGTAAATGCCACAGAGGGCAGTTTGTGCCTATAACCATG | + |
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Preference number: 1 (lower is better) Translates to: QIIGSAGKWLPWDAL*LRKCHRGQFVPITM Trigger: CATGGTTATAGGCACAAACTGCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAGCAGATCCTATGATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 90 bp | AGAGGGGCTATTACCATTCTTCAAATCATAGGATCTGCTGGGAAATaGCTCCCCTGGGATGCCCTGTGCCTACGTAAATGCCACAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: RGAITILQIIGSAGK*LPWDALCLRKCHRG Trigger: CCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAGCAGATCCTATGATTTGAAGAATGGTAATAGCCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 90 bp | ATTACCATTCTTCAAATCATAGGATCTGCTGGGAAATGGCTCCCCTaGGATGCCCTGTGCCTACGTAAATGCCACAGAGGGCAGTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: ITILQIIGSAGKWLP*DALCLRKCHRGQFV Trigger: CACAAACTGCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAGCAGATCCTATGATTTGAAGAATGGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 90 bp | AAGCGGAGGAGAGTGGCTGGAGTGTCCATCATATGGGAATTGGAATaGTTCTCTCTAAAGAGCACACAAATAACTACATCACGCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KRRRVAGVSIIWELE*FSLKSTQITTSRLP Trigger: TGGGAGGCGTGATGTAGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACACTCCAGCCACTCTCCTCCGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR GCA 90 bp | TGCATTCCGAGAGATCCCGGCTGGCTTTTCTGTGGCTTTCAGAAATaGCTCAATGATCGCATAATTTGGCTCTTAGGTGTACCTAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: CIPRDPGWLFCGFQK*LNDRIIWLLGVPKL Trigger: AAGCTTAGGTACACCTAAGAGCCAAATTATGCGATCATTGAGGCATTTCTGAAAGCCACAGAAAAGCCAGCCGGGATCTCTCGGAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR GCA 90 bp | TGCCCACAAGCCCTGTTCTCTTTCCACCTCAACTCCCCTACACACTaGTCTGCTATTTATTTTTCCCTTAACCCAGCACTTGTATGCTTT | + |
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Preference number: 1 (lower is better) Translates to: CPQALFSFHLNSPTH*SAIYFSLNPALVCF Trigger: AAAGCATACAAGTGCTGGGTTAAGGGAAAAATAAATAGCAGAGCAGTGTGTAGGGGAGTTGAGGTGGAAAGAGAACAGGGCTTGTGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 90 bp | GGGTGCAGGAATGTAAGGGTAAGACCCACACACCTGGGCTGCTCTTaGGTGAGGCTTTTGAGAATACAGAATACTTTAGTAACTTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: GCRNVRVRPTHLGCS*VRLLRIQNTLVTFH Trigger: GTGAAAAGTTACTAAAGTATTCTGTATTCTCAAAAGCCTCACCCAAGAGCAGCCCAGGTGTGTGGGTCTTACCCTTACATTCCTGCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CAA 90 bp | CACCTCCTAGCTGGGGATGGTGGGCCTGGCCCTCCACAAGGGCTGTaGTGTGAAAGCAGACACAGGAGGAAATGGAGAAGCCAGAATCCT | + |
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Preference number: 2 (lower is better) Translates to: HLLAGDGGPGPPQGL*CESRHRRKWRSQNP Trigger: AGGATTCTGGCTTCTCCATTTCCTCCTGTGTCTGCTTTCACACAACAGCCCTTGTGGAGGGCCAGGCCCACCATCCCCAGCTAGGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTAATGCTGTGAGATCAGGTTCTAGGGAGAGAAGCAAGACCACCCCACTACCTAGCTGGGGATGGTaGGCCTGGCCCTCCACAAGG | + |
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Preference number: 2 (lower is better) Translates to: ACNAVRSGSRERSKTTPLPSWGW*AWPSTR Trigger: CCTTGTGGAGGGCCAGGCCCACCATCCCCAGCTAGG...TAGTGGGGTGGTCTTGCTTCTCTCCCTAGAACCTGATCTCACAGCATTACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCAACGCACCCACCTTTCATCTGTGTGCCCTGTGGGCGGAATCCTTGGGGACCGTGTCAGCAGCTTaGTACATTCAGAAGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: LSNAPTFHLCALWAESLGTVSAA*YIQKDG Trigger: TCCATCCTTCTGAATGTACCAAGCTGCTGACACGGT...CCCCAAGGATTCCGCCCACAGGGCACACAGATGAAAGGTGGGTGCGTTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCAAATGAGAGTCTTTCCGAAGGCTGTTCTGGGAGCATGGATGCTGGCCACTGCTGAAATGCGTTGGTaGCTCCTTGGGTCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PQMRVFPKAVLGAWMLATAEMRW*LLGSPP Trigger: AGGAGGAGACCCAAGGAGTCACCAACGCATTTCAGC...AGTGGCCAGCATCCATGCTCCCAGAACAGCCTTCGGAAAGACTCTCATTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGACCATACAGATGAAGGGCTGGCTTGTGAACGTCACTGCTGGAAACTCCCCACACACCTGGGCTaGTCTTGGGTGAGGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: TQDHTDEGLACERHCWKLPTHLG*SWVRLL Trigger: CAAAAGCCTCACCCAAGAGCAGCCCAGGTGTGTGGG...GAGTTTCCAGCAGTGACGTTCACAAGCCAGCCCTTCATCTGTATGGTCCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CAA 90 bp | GAAACTCTCTACATGCAGCAGACAGACTGCAGTCCCCTAGAAAGATaGCCCACAGTGGAGAGCACCTTGCCTCTCCTTAGGAGTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ETLYMQQTDCSPLER*PTVESTLPLLRSSS Trigger: GGAAGAACTCCTAAGGAGAGGCAAGGTGCTCTCCACTGTGGGCAATCTTTCTAGGGGACTGCAGTCTGTCTGCTGCATGTAGAGAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAAATGGCTCCCCTGGGATGCCCTGTGCCTACGTAAATGCCACAGAGGGCGTTTTGTCAACACGGTaGCATTTTCTTGGTGACATA | + |
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Preference number: 2 (lower is better) Translates to: LGNGSPGMPCAYVNATEGVLSTR*HFLGDI Trigger: TATGTCACCAAGAAAATGTCACCGTGTTGACAAAAC...GCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGGAAATGGCTCCCCTGGGATGCCCTGTGCCTACGTAAATGCCACAGAGGGCTTCCTTTTCCAGAAATaGCATGGGTTTTGTCAACAC | + |
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Preference number: 2 (lower is better) Translates to: LGNGSPGMPCAYVNATEGFLFQK*HGFCQH Trigger: GTGTTGACAAAACCCATGGCATTTCTGGAAAAGGAA...GCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGACCATACAGATGAAGGGCTGGCTTGTGAACGTCACTGCTGGAAACTCAAAGATTGCCCACAGTaGAGAGCACCTTGCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TQDHTDEGLACERHCWKLKDCPQ*RAPCLS Trigger: GGAGAGGCAAGGTGCTCTCCACTGTGGGCAATCTTT...GAGTTTCCAGCAGTGACGTTCACAAGCCAGCCCTTCATCTGTATGGTCCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR TCA 90 bp | CGACCTTTGACCTTCAGGGTGAGGGTTGGATGCACCCGATGTCTCAGTGCTGTCTATATACACCAGGAGTaGCATGAGGGGAAGTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RPLTFRVRVGCTRCLSAVYIHQE*HEGKSL Trigger: TAAAGACTTCCCCTCATGTCACTCCTGGTGTATATA...GACAGCACTGAGACATCGGGTGCATCCAACCCTCACCCTGAAGGTCAAAGGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGATGTTCAGAGGTGTCTTCTACGCATTTTCTTTACAGGATGGACAAATGGGCATCCGAAGGCAGTaGACCGTGTCAGCAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: EGMFRGVFYAFSLQDGQMGIRRQ*TVSAAW Trigger: CCAAGCTGCTGACACGGTGCACTGCCTTCGGATGCC...CATTTGTCCATCCTGTAAAGAAAATGCGTAGAAGACACCTCTGAACATCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTACAGGATGGACAAATGAACGCAGGTCCAAGCGGAGGAGAGTGGCTGGAATAAATAGGTGTGGCTaGAGAGCTTGCCCTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: FFTGWTNERRSKRRRVAGINRCG*RACPVE Trigger: CTCAACAGGGCAAGCTCTGCAGCCACACCTATTTAT...TCCAGCCACTCTCCTCCGCTTGGACCTGCGTTCATTTGTCCATCCTGTAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGTGTCCATCATATGGGAATTGGAATGGTTCTCTCTAAAGAGCACACAACTTGCCAGCAAAGGGTaGCAGCAAAGGGGACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: AGVSIIWELEWFSLKSTQLASKG*QQRGQA Trigger: TGCTTGTCCCCTTTGCTGTCACCCTTTGCTGGCAAG...TTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACACTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGATCCCGGCTGGCTTTTCTGTGGCTTTCAGAAATGCCTCAATGATCGCATAAAGAGGGAGGAGGGGTaGAGGAATGTAAGGGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: RDPGWLFCGFQKCLNDRIKREEG*RNVRVR Trigger: TCTTACCCTTACATTCCTGCACCCCTCCTCCCTCTT...TATGCGATCATTGAGGCATTTCTGAAAGCCACAGAAAAGCCAGCCGGGATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGATCCCGGCTGGCTTTTCTGTGGCTTTCAGAAATGCCTCAATGATCGCATACACCTGGGCTGCTCTTaGGTGAGGCTTTTGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: RDPGWLFCGFQKCLNDRIHLGCS*VRLLRI Trigger: TATTCTCAAAAGCCTCACCCAAGAGCAGCCCAGGTG...TATGCGATCATTGAGGCATTTCTGAAAGCCACAGAAAAGCCAGCCGGGATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR CCA 90 bp | CGACCTTTGACCTTCAGGGTGAGGGTTGGATGCACCCGATGTCTCAGTGCTGTCATATGGGAATTGGAATaGTTCTCTCTAAAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: RPLTFRVRVGCTRCLSAVIWELE*FSLKST Trigger: TGTGCTCTTTAGAGAGAACCATTCCAATTCCCATAT...GACAGCACTGAGACATCGGGTGCATCCAACCCTCACCCTGAAGGTCAAAGGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCAAATGAGAGTCTTTCCGAAGGCTGTTCTGGGAGCATGGATGCTGGCCACTGTAATGGGTTCCACCTaGGAAAATCAATCGTATACA | + |
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Preference number: 2 (lower is better) Translates to: PQMRVFPKAVLGAWMLATVMGST*ENQSYT Trigger: TGTATACGATTGATTTTCCCAGGTGGAACCCATTAC...AGTGGCCAGCATCCATGCTCCCAGAACAGCCTTCGGAAAGACTCTCATTTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGATCCCGGCTGGCTTTTCTGTGGCTTTCAGAAATGCCTCAATGATCGCATAGACATCATCCCAATGTaGATGTGCATAGCACATCAC | + |
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Preference number: 2 (lower is better) Translates to: RDPGWLFCGFQKCLNDRIDIIPM*MCIAHH Trigger: GTGATGTGCTATGCACATGCACATTGGGATGATGTC...TATGCGATCATTGAGGCATTTCTGAAAGCCACAGAAAAGCCAGCCGGGATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR GCA 90 bp | GTGTCCATCATATGGGAATTGGAATGGTTCTCTCTAAAGAGCACACAAATAACTGAGTTAGAACACCAGTaGAAGGGCACTGGGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VSIIWELEWFSLKSTQITELEHQ*KGTGKG Trigger: CCCCTTCCCAGTGCCCTTGCACTGGTGTTCTAACTC...AGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCATCATATGGGAATTGGAATGGTTCTCTCTAAAGAGCACACAAATAACTCCGAGAGATCCCGGCTaGCTTTTCTGTGGCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VSIIWELEWFSLKSTQITPRDPG*LFCGFQ Trigger: CTGAAAGCCACAGAAAAGCCAGCCGGGATCTCTCGG...AGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGATGTTCAGAGGTGTCTTCTACGCATTTTCTTTACAGGATGGACAAATGATACAGATGAAGGGCTaGCTTGTGAACGTCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: EGMFRGVFYAFSLQDGQMIQMKG*LVNVTA Trigger: AGCAGTGACGTTCACAAGCCAGCCCTTCATCTGTAT...CATTTGTCCATCCTGTAAAGAAAATGCGTAGAAGACACCTCTGAACATCCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGTATTTTTATTTTCAGTTGCTTGGCAGTCTGTCATGCTACAAATGTCACCTAAGTCCAGGCTGAAATaGGTTGGTGACTCCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SVFLFSVAWQSVMLQMSPKSRLK*VGDSLG Trigger: ACCCAAGGAGTCACCAACGCATTTCAGCCTGGACTT...AGGTGACATTTGTAGCATGACAGACTGCCAAGCAACTGAAAATAAAAATACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR TCA 90 bp | AGTGTATTTTTATTTTCAGTTGCTTGGCAGTCTGTCATGCTACAAATGTCACCTGTGACATTTTCTTGGTaGCATAGAGAAGGGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SVFLFSVAWQSVMLQMSPVTFSW*HREGQG Trigger: GCCTTGCCCTTCTCTATGTCACCAAGAAAATGTCAC...AGGTGACATTTGTAGCATGACAGACTGCCAAGCAACTGAAAATAAAAATACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCATCATATGGGAATTGGAATGGTTCTCTCTAAAGAGCACACAAATAACTAAAATAAATGTAGTGTaGACGCAGGGAGACATCATC | + |
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Preference number: 2 (lower is better) Translates to: VSIIWELEWFSLKSTQITKINVV*TQGDII Trigger: GATGATGTCTCCCTGCGTTCACACTACATTTATTTT...AGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR GCA 72 bp | CTGGCCACTCTCCAACGCACCCACCTTTCATCTGTGTaGCCTGTGGGCGGAATCCTTGGGGAGGGGATGTTC | + |
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Preference number: 3 (lower is better) Translates to: LATLQRTHLSSV*PVGGILGEGMF Trigger: GAACATCCCCTCCCCAAGGATTCCGCCCACAGGGCACACAGATGAAAGGTGGGTGCGTTGGAGAGTGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 72 bp | CTCTCCAACGCACCCACCTTTCATCTGTGTGCCCTGTaGGCGGAATCCTTGGGGAGGGGATGTTCAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: LSNAPTFHLCAL*AESLGRGCSEV Trigger: CACCTCTGAACATCCCCTCCCCAAGGATTCCGCCCACAGGGCACACAGATGAAAGGTGGGTGCGTTGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR GCA 72 bp | CTTCCCTGGACCAGGGGTAGCGGCATCCGAAGGCAGTaGACCGTGTCAGCAGCTTGGTACATTCAGAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: LPWTRGSGIRRQ*TVSAAWYIQKD Trigger: ATCCTTCTGAATGTACCAAGCTGCTGACACGGTGCACTGCCTTCGGATGCCGCTACCCCTGGTCCAGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR GCA 72 bp | GGATCTGCTGGGAAATGGCTCCCCTGGGATGCCCTGTaGCTACGTAAATGCCACAGAGGGCAGTTTGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: GSAGKWLPWDAL*LRKCHRGQFVP Trigger: AGGCACAAACTGCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAGCAGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 72 bp | TGGCAGTCTGTCATGCTACAAATGTCACCTCCTAGCTaGGGATGGTGGGCCTGGCCCTCCACAAGGGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: WQSVMLQMSPPS*GWWAWPSTRAV Trigger: AACAGCCCTTGTGGAGGGCCAGGCCCACCATCCCCAGCTAGGAGGTGACATTTGTAGCATGACAGACTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CCA 72 bp | CACTGGTTTCCGACCTTTGACCTTCAGGGTGAGGGTTaGATGCACCCGATGTCTCAGTGCTGTCTCGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HWFPTFDLQGEG*MHPMSQCCLGG Trigger: GCCTCCGAGACAGCACTGAGACATCGGGTGCATCCAACCCTCACCCTGAAGGTCAAAGGTCGGAAACCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | AGGTTGCTCACTACCTTGGGCGAGCCCCAGGGTCTCTaGTGTCACTGGTTTCCGACCTTTGACCTTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RLLTTLGEPQGL*CHWFPTFDLQG Trigger: ACCCTGAAGGTCAAAGGTCGGAAACCAGTGACACCAGAGACCCTGGGGCTCGCCCAAGGTAGTGAGCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAAATGAGAGTCTTTCCGAAGGCTGTTCTGGGAGCATGGATGCTGGCCACTGACAGCTCCAGCTCCTaGCCAGCAAAGGGTGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PQMRVFPKAVLGAWMLATDSSSS*PAKGDS Trigger: GCTGTCACCCTTTGCTGGCAAGGAGCTGGAGCTGTC...AGTGGCCAGCATCCATGCTCCCAGAACAGCCTTCGGAAAGACTCTCATTTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR TCA 72 bp | AGGGCACTGGGAAGGGGACATGACCTTATCACATGCTaGACCTGGGACAGCAGTGTGGGCAGGTTTGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: RALGRGHDLITC*TWDSSVGRFGP Trigger: TGGTCCAAACCTGCCCACACTGCTGTCCCAGGTTCAGCATGTGATAAGGTCATGTCCCCTTCCCAGTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR GCA 72 bp | CCCACGGCCTCAAAGCCTTGCAATCATGAAAGAGCGTaGCCACAAGCCCTGTTCTCTTTCCACCTCAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: PTASKPCNHERA*PQALFSFHLNS Trigger: GGAGTTGAGGTGGAAAGAGAACAGGGCTTGTGGGCACGCTCTTTCATGATTGCAAGGCTTTGAGGCCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | CCACCTTTCATCTGTGTGCCCTGTGGGCGGAATCCTTaGGGAGGGGATGTTCAGAGGTGTCTTCTACGCATT | + |
|
Preference number: 3 (lower is better) Translates to: PPFICVPCGRNP*GGDVQRCLLRI Trigger: AATGCGTAGAAGACACCTCTGAACATCCCCTCCCCAAGGATTCCGCCCACAGGGCACACAGATGAAAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | GAGTCTTTCCGAAGGCTGTTCTGGGAGCATGGATGCTaGCCACTCTCCAACGCACCCACCTTTCATCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ESFRRLFWEHGC*PLSNAPTFHLC Trigger: ACACAGATGAAAGGTGGGTGCGTTGGAGAGTGGCCAGCATCCATGCTCCCAGAACAGCCTTCGGAAAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | CTTCAAATCATAGGATCTGCTGGGAAATGGCTCCCCTaGGATGCCCTGTGCCTACGTAAATGCCACAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQIIGSAGKWLP*DALCLRKCHRG Trigger: CCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAGCAGATCCTATGATTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR GCA 72 bp | AAATGGCTCCCCTGGGATGCCCTGTGCCTACGTAAATaGCACAGAGGGCAGTTTGTGCCTATAACCATGACA | + |
|
Preference number: 3 (lower is better) Translates to: KWLPWDALCLRK*HRGQFVPITMT Trigger: TGTCATGGTTATAGGCACAAACTGCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR GCA 72 bp | CAGAGGGGCTATTACCATTCTTCAAATCATAGGATCTaGTGGGAAATGGCTCCCCTGGGATGCCCTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRGYYHSSNHRI*WEMAPLGCPVP Trigger: AGGCACAGGGCATCCCAGGGGAGCCATTTCCCAGCAGATCCTATGATTTGAAGAATGGTAATAGCCCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGGACCATACAGATGAAGGGCTGGCTTGTGAACGTCACTGCTGGAAACTCACAGTGGAGAGCACCTaGCCTCTCCTTAGGAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQDHTDEGLACERHCWKLTVEST*PLLRSS Trigger: AGAACTCCTAAGGAGAGGCAAGGTGCTCTCCACTGT...GAGTTTCCAGCAGTGACGTTCACAAGCCAGCCCTTCATCTGTATGGTCCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR TCA 72 bp | ATAAGTCACATCCAAGTCCAGGCTGAAATGCGTTGGTaGCTCCTTGGGTCTCCTCCTCAGGAGATACCACAC | + |
|
Preference number: 3 (lower is better) Translates to: ISHIQVQAEMRW*LLGSPPQEIPH Trigger: GTGTGGTATCTCCTGAGGAGGAGACCCAAGGAGTCACCAACGCATTTCAGCCTGGACTTGGATGTGACTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR TCA 72 bp | GTGTCTTCTACGCATTTTCTTTACAGGATGGACAAATaGACGCAGGTCCAAGCGGAGGAGAGTGGCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VSSTHFLYRMDK*TQVQAEESGWS Trigger: ACTCCAGCCACTCTCCTCCGCTTGGACCTGCGTTCATTTGTCCATCCTGTAAAGAAAATGCGTAGAAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | TCCTTTAGTGGTGCCTGCATTCCGAGAGATCCCGGCTaGCTTTTCTGTGGCTTTCAGAAATGCCTCAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: SFSGACIPRDPG*LFCGFQKCLND Trigger: ATCATTGAGGCATTTCTGAAAGCCACAGAAAAGCCAGCCGGGATCTCTCGGAATGCAGGCACCACTAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | TCCAAGCGGAGGAGAGTGGCTGGAGTGTCCATCATATaGGAATTGGAATGGTTCTCTCTAAAGAGCACACAA | + |
|
Preference number: 3 (lower is better) Translates to: SKRRRVAGVSII*ELEWFSLKSTQ Trigger: TTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACACTCCAGCCACTCTCCTCCGCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | GTTCAGAGGTGTCTTCTACGCATTTTCTTTACAGGATaGACAAATGAACGCAGGTCCAAGCGGAGGAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VQRCLLRIFFTG*TNERRSKRRRV Trigger: CACTCTCCTCCGCTTGGACCTGCGTTCATTTGTCCATCCTGTAAAGAAAATGCGTAGAAGACACCTCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR TCA 72 bp | CAGAACTTCTTGGCAGTGACCTATATACACCAGGAGTaGCATGAGGGGAAGTCTTTAGTTAGTCAGACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QNFLAVTYIHQE*HEGKSLVSQTR Trigger: CCTGGTCTGACTAACTAAAGACTTCCCCTCATGTCACTCCTGGTGTATATAGGTCACTGCCAAGAAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR GCA 72 bp | GCCCTGTTCTCTTTCCACCTCAACTCCCCTACACACTaGTCTGCTATTTATTTTTCCCTTAACCCAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: ALFSFHLNSPTH*SAIYFSLNPAL Trigger: AAGTGCTGGGTTAAGGGAAAAATAAATAGCAGAGCAGTGTGTAGGGGAGTTGAGGTGGAAAGAGAACAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCATCATATGGGAATTGGAATGGTTCTCTCTAAAGAGCACACAAATAACTAGTCCCCTAGAAAGATaGCCCACAGTGGAGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VSIIWELEWFSLKSTQITSPLER*PTVEST Trigger: GGTGCTCTCCACTGTGGGCAATCTTTCTAGGGGACT...AGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | TATAGACTTGAACTCAGGACCATACAGATGAAGGGCTaGCTTGTGAACGTCACTGCTGGAAACTCTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: YRLELRTIQMKG*LVNVTAGNSLH Trigger: ATGTAGAGAGTTTCCAGCAGTGACGTTCACAAGCCAGCCCTTCATCTGTATGGTCCTGAGTTCAAGTCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | AATGTAAGGGTAAGACCCACACACCTGGGCTGCTCTTaGGTGAGGCTTTTGAGAATACAGAATACTTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NVRVRPTHLGCS*VRLLRIQNTLV Trigger: TACTAAAGTATTCTGTATTCTCAAAAGCCTCACCCAAGAGCAGCCCAGGTGTGTGGGTCTTACCCTTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | CAAGGGCTGTTGTGTGAAAGCAGACACAGGAGGAAATaGAGAAGCCAGAATCCTGTACAATGTGTGATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: QGLLCESRHRRK*RSQNPVQCVIN Trigger: ATTAATCACACATTGTACAGGATTCTGGCTTCTCCATTTCCTCCTGTGTCTGCTTTCACACAACAGCCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR TCA 72 bp | GAGAATACAGAATACTTTAGTAACTTTTCACAGCTATaGGTTAGAACACCAGTGCAAGGGCACTGGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ENTEYFSNFSQL*VRTPVQGHWEG Trigger: CCCTTCCCAGTGCCCTTGCACTGGTGTTCTAACTCATAGCTGTGAAAAGTTACTAAAGTATTCTGTATTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CCA 72 bp | AGAGTGGCTGGAGTGTCCATCATATGGGAATTGGAATaGTTCTCTCTAAAGAGCACACAAATAACTACATCA | + |
|
Preference number: 3 (lower is better) Translates to: RVAGVSIIWELE*FSLKSTQITTS Trigger: TGATGTAGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACACTCCAGCCACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCATCATATGGGAATTGGAATGGTTCTCTCTAAAGAGCACACAAATAACTCTTCTCTCTATAGACTaGAACTCAGGACCATACAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSIIWELEWFSLKSTQITLLSID*NSGPYR Trigger: TCTGTATGGTCCTGAGTTCAAGTCTATAGAGAGAAG...AGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR TCA 90 bp | CCTCAAATGAGAGTCTTTCCGAAGGCTGTTCTGGGAGCATGGATGCTGGCCACTGGCAGGCTGCATGGGTaGGGCCTGGGTCCCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQMRVFPKAVLGAWMLATGRLHG*GLGPLA Trigger: GGCAAGGGGACCCAGGCCTCACCCATGCAGCCTGCC...AGTGGCCAGCATCCATGCTCCCAGAACAGCCTTCGGAAAGACTCTCATTTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGCGGCATCCGAAGGCAGTGCACCGTGTCAGCAGCTTGGTACATTCAGAGTCCCGCAGCCTGCCTaGCAGTTTCCCCACGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: GVAASEGSAPCQQLGTFRVPQPA*QFPHVI Trigger: GATTACGTGGGGAAACTGGCAGGCAGGCTGCGGGAC...TCTGAATGTACCAAGCTGCTGACACGGTGCACTGCCTTCGGATGCCGCTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | CGACCTTTGACCTTCAGGGTGAGGGTTGGATGCACCCGATGTCTCAGTGCTGTCCCCAAGACTGGCTGGTaGCCCTGCGCATGCGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLTFRVRVGCTRCLSAVPKTGW*PCACVV Trigger: AACCACGCATGCGCAGGGCCACCAGCCAGTCTTGGG...GACAGCACTGAGACATCGGGTGCATCCAACCCTCACCCTGAAGGTCAAAGGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGACCATACAGATGAAGGGCTGGCTTGTGAACGTCACTGCTGGAAACTCGGGTCGAGGGCAGGCTaGATGGGTGAGGCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQDHTDEGLACERHCWKLGSRAG*MGEAWV Trigger: GACCCAGGCCTCACCCATGCAGCCTGCCCTCGACCC...GAGTTTCCAGCAGTGACGTTCACAAGCCAGCCCTTCATCTGTATGGTCCTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | CTGGGAAATGGCTCCCCTGGGATGCCCTGTGCCTACGTAAATGCCACAGAGGGCTCAGGTGTCGCTCAATaGCAATGGCCAGTAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGNGSPGMPCAYVNATEGSGVAQ*QWPVSC Trigger: GCAGCTTACTGGCCATTGCCATTGAGCGACACCTGA...GCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGGGGACATGACCTTATCACATGCTGAACCTGGGACAGCAGTGTGGGCATCTCAGAGTTGTGGTTaGCCACCCTGCGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WEGDMTLSHAEPGTAVWASQSCG*PPCGCW Trigger: CCAGCAGCCGCAGGGTGGCCAACCACAACTCTGAGA...TGCCCACACTGCTGTCCCAGGTTCAGCATGTGATAAGGTCATGTCCCCTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR TCA 90 bp | CGACCTTTGACCTTCAGGGTGAGGGTTGGATGCACCCGATGTCTCAGTGCTGTCACATACTGCCCTCCCTaGGGAACCACACTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLTFRVRVGCTRCLSAVTYCPP*GTTLLE Trigger: CTCCAACAGTGTGGTTCCTCAGGGAGGGCAGTATGT...GACAGCACTGAGACATCGGGTGCATCCAACCCTCACCCTGAAGGTCAAAGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTGAGAAGCTTTGCTGACAGCTCCAGCTCCTTGCCAGCAAAGGGTGACAGCTGGCCAGCGTGTAGATaGCAGGGTTCATGGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELRSFADSSSSLPAKGDSWPACR*QGSWPS Trigger: ACTCGGCCATGAACCCTGTCATCTACACGCTGGCCA...GCTGTCACCCTTTGCTGGCAAGGAGCTGGAGCTGTCAGCAAAGCTTCTCAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR TCA 90 bp | GCCTGTAATGCTGTGAGATCAGGTTCTAGGGAGAGAAGCAAGACCACCCCACTAGGGTCCCCTTGCCCTTaGCTAGACAGCCGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: ACNAVRSGSRERSKTTPLGSPCP*LDSRTP Trigger: TGGTGTGCGGCTGTCTAGTCAAGGGCAAGGGGACCC...TAGTGGGGTGGTCTTGCTTCTCTCCCTAGAACCTGATCTCACAGCATTACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR GCA 90 bp | TCTTTACAGGATGGACAAATGAACGCAGGTCCAAGCGGAGGAGAGTGGCTGGAGCAATGGCCAGTAAGCTaGAGGTGGATGCGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQDGQMNAGPSGGEWLEQWPVS*RWMRPG Trigger: CCCTGGGCGCATCCACCTGCAGCTTACTGGCCATTG...CTCCAGCCACTCTCCTCCGCTTGGACCTGCGTTCATTTGTCCATCCTGTAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTACAGGATGGACAAATGAACGCAGGTCCAAGCGGAGGAGAGTGGCTGGAGCCAGTAAGCTGCAGGTaGATGCGCCCAGGGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: SLQDGQMNAGPSGGEWLEPVSCR*MRPGLR Trigger: TCGTAGCCCTGGGCGCATCCACCTGCAGCTTACTGG...CTCCAGCCACTCTCCTCCGCTTGGACCTGCGTTCATTTGTCCATCCTGTAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CAA 72 bp | CCCACCTTTCATCTGTGTGCCCTGTGGGCGGAATCCTaGGGGAGGGGATGTTCAGAGGTGTCTTCTACGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTFHLCALWAES*GRGCSEVSSTH Trigger: ATGCGTAGAAGACACCTCTGAACATCCCCTCCCCAAGGATTCCGCCCACAGGGCACACAGATGAAAGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTACAGGATGGACAAATGAACGCAGGTCCAAGCGGAGGAGAGTGGCTGGAGGATCTCTCAGAGTTGTaGTTGGCCACCCTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLQDGQMNAGPSGGEWLEDLSEL*LATLRL Trigger: CAGCCGCAGGGTGGCCAACCACAACTCTGAGAGATC...CTCCAGCCACTCTCCTCCGCTTGGACCTGCGTTCATTTGTCCATCCTGTAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | TCCGAAGGCAGTGCACCGTGTCAGCAGCTTGGTACATTCAGAAGGATGGAGCCCTCCGCAGAAGGGCCATaGATCTCTCAGAGTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGSAPCQQLGTFRRMEPSAEGP*ISQSCG Trigger: ACCACAACTCTGAGAGATCCATGGCCCTTCTGCGGA...GGGCTCCATCCTTCTGAATGTACCAAGCTGCTGACACGGTGCACTGCCTTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CAA 72 bp | AGGGAGTTGAGAAGCTTTGCTGACAGCTCCAGCTCCTaGCCAGCAAAGGGTGACAGCAAAGGGGACAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RELRSFADSSSS*PAKGDSKGDKQ Trigger: CTGCTTGTCCCCTTTGCTGTCACCCTTTGCTGGCAAGGAGCTGGAGCTGTCAGCAAAGCTTCTCAACTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | TTCTTTACAGGATGGACAAATGAACGCAGGTCCAAGCGGAGGAGAGTGGCTGGAGTCATTTCCCAAGACTaGCTGGTGGCCCTGCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FFTGWTNERRSKRRRVAGVISQD*LVALRM Trigger: CATGCGCAGGGCCACCAGCCAGTCTTGGGAAATGAC...TCCAGCCACTCTCCTCCGCTTGGACCTGCGTTCATTTGTCCATCCTGTAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CAA 72 bp | ACATCCAAGTCCAGGCTGAAATGCGTTGGTGACTCCTaGGGTCTCCTCCTCAGGAGATACCACACAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSKSRLKCVGDS*GLLLRRYHTVW Trigger: CCAGACTGTGTGGTATCTCCTGAGGAGGAGACCCAAGGAGTCACCAACGCATTTCAGCCTGGACTTGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| 3UTR CAA 72 bp | TACATGCAGCAGACAGACTGCAGTCCCCTAGAAAGATaGCCCACAGTGGAGAGCACCTTGCCTCTCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YMQQTDCSPLER*PTVESTLPLLR Trigger: CCTAAGGAGAGGCAAGGTGCTCTCCACTGTGGGCAATCTTTCTAGGGGACTGCAGTCTGTCTGCTGCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR TCA 90 bp | TCCGAAGGCAGTGCACCGTGTCAGCAGCTTGGTACATTCAGAAGGATGGAGCCCGAGCCAAGTTGCCGATaGAAAAGTACATGCGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGSAPCQQLGTFRRMEPEPSCR*KSTCGC Trigger: ACAACCGCATGTACTTTTTCATCGGCAACTTGGCTC...GGGCTCCATCCTTCTGAATGTACCAAGCTGCTGACACGGTGCACTGCCTTCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGACCATACAGATGAAGGGCTGGCTTGTGAACGTCACTGCTGGAAACTCGTCGCTCAATGGCAATaGCCAGTAAGCTGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQDHTDEGLACERHCWKLVAQWQ*PVSCRW Trigger: CCACCTGCAGCTTACTGGCCATTGCCATTGAGCGAC...GAGTTTCCAGCAGTGACGTTCACAAGCCAGCCCTTCATCTGTATGGTCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR TCA 90 bp | GAGGGGATGTTCAGAGGTGTCTTCTACGCATTTTCTTTACAGGATGGACAAATGGGGGCAGGTCTTCCTTaGCCTTCGGAGAGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGMFRGVFYAFSLQDGQMGAGLP*PSESGC Trigger: GCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCC...CATTTGTCCATCCTGTAAAGAAAATGCGTAGAAGACACCTCTGAACATCCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGGGGACATGACCTTATCACATGCTGAACCTGGGACAGCAGTGTGGGCAAATATTGACCTTGTATaGTATGCCGGCCAGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WEGDMTLSHAEPGTAVWANIDLV*YAGQQV Trigger: GACCTGCTGGCCGGCATAGCATACAAGGTCAATATT...TGCCCACACTGCTGTCCCAGGTTCAGCATGTGATAAGGTCATGTCCCCTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | GGGTTCCACCTGGGAAAATCAATCGTATACATCCTGTACAACACAGCAACGAACTTTCCCAAGACTGGCTaGTGGCCCTGCGCATGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFHLGKSIVYILYNTATNFPKTG*WPCACV Trigger: CACGCATGCGCAGGGCCACCAGCCAGTCTTGGGAAA...GTTCGTTGCTGTGTTGTACAGGATGTATACGATTGATTTTCCCAGGTGGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | ACACCAGTGCAAGGGCACTGGGAAGGGGACATGACCTTATCACATGCTGAACCTAGGCGATGTATTTCTTaGAGTAGAGGGGCAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TPVQGHWEGDMTLSHAEPRRCIS*SRGARW Trigger: CCATCTTGCCCCTCTACTCCAAGAAATACATCGCCT...AGGTTCAGCATGTGATAAGGTCATGTCCCCTTCCCAGTGCCCTTGCACTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
||
| CDS-3UTR CCA 90 bp | TTCTTTACAGGATGGACAAATGAACGCAGGTCCAAGCGGAGGAGAGTGGCTGGAGGCTGCTGTTGTTACTaGAGCTTGACTTACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFTGWTNERRSKRRRVAGGCCCY*SLTYFC Trigger: GCAGAAGTAAGTCAAGCTCCAGTAACAACAGCAGCC...TCCAGCCACTCTCCTCCGCTTGGACCTGCGTTCATTTGTCCATCCTGTAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR TCA 90 bp | GGGTTCCACCTGGGAAAATCAATCGTATACATCCTGTACAACACAGCAACGAACGGGACCAACAGGCAATaGACACACTCACCACAATCA | + |
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Preference number: 4 (lower is better) Translates to: GFHLGKSIVYILYNTATNGTNRQ*THSPQS Trigger: TGATTGTGGTGAGTGTGTTCATTGCCTGTTGGTCCC...GTTCGTTGCTGTGTTGTACAGGATGTATACGATTGATTTTCCCAGGTGGAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CCA 90 bp | GTGTCCATCATATGGGAATTGGAATGGTTCTCTCTAAAGAGCACACAAATAACTTGCATGGGTGAGGCCTaGGTCCCCTTGCCCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: VSIIWELEWFSLKSTQITCMGEA*VPLPLT Trigger: AGTCAAGGGCAAGGGGACCCAGGCCTCACCCATGCA...AGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR TCA 90 bp | GGGTTCCACCTGGGAAAATCAATCGTATACATCCTGTACAACACAGCAACGAACAGCATGATGAACCACTaGCTCTTGAAGAGGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: GFHLGKSIVYILYNTATNSMMNH*LLKRME Trigger: CTCCATCCTCTTCAAGAGTCAGTGGTTCATCATGCT...GTTCGTTGCTGTGTTGTACAGGATGTATACGATTGATTTTCCCAGGTGGAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CAA 72 bp | GAATGTAAGGGTAAGACCCACACACCTGGGCTGCTCTaGGGTGAGGCTTTTGAGAATACAGAATACTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: ECKGKTHTPGLL*GEAFENTEYFS Trigger: ACTAAAGTATTCTGTATTCTCAAAAGCCTCACCCAAGAGCAGCCCAGGTGTGTGGGTCTTACCCTTACATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| 3UTR CAA 72 bp | CGGAGGAGAGTGGCTGGAGTGTCCATCATATGGGAATaGGAATGGTTCTCTCTAAAGAGCACACAAATAACT | + |
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Preference number: 4 (lower is better) Translates to: RRRVAGVSIIWE*EWFSLKSTQIT Trigger: AGTTATTTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACACTCCAGCCACTCTCCTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CCA 90 bp | GAGGGGATGTTCAGAGGTGTCTTCTACGCATTTTCTTTACAGGATGGACAAATGCTTGTTGGCATCATATaGCCTCATCTTGATCATGGT | + |
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Preference number: 4 (lower is better) Translates to: EGMFRGVFYAFSLQDGQMLVGII*PHLDHG Trigger: ACCATGATCAAGATGAGGCCATATGATGCCAACAAG...CATTTGTCCATCCTGTAAAGAAAATGCGTAGAAGACACCTCTGAACATCCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR TCA 90 bp | AGTGTATTTTTATTTTCAGTTGCTTGGCAGTCTGTCATGCTACAAATGTCACCTGTTGTTACTGGAGCTTaGCTTACTTCTGCTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SVFLFSVAWQSVMLQMSPVVTGA*LTSAWV Trigger: GACCCAAGCAGAAGTAAGTCAAGCTCCAGTAACAAC...AGGTGACATTTGTAGCATGACAGACTGCCAAGCAACTGAAAATAAAAATACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CCA 90 bp | AGTGTATTTTTATTTTCAGTTGCTTGGCAGTCTGTCATGCTACAAATGTCACCTGAGGAACCACACTGTTaGAGACAGACTGAACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SVFLFSVAWQSVMLQMSPEEPHC*RQTERL Trigger: AAGACGTTCAGTCTGTCTCCAACAGTGTGGTTCCTC...AGGTGACATTTGTAGCATGACAGACTGCCAAGCAACTGAAAATAAAAATACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CCA 90 bp | GCTGGAGTGTCCATCATATGGGAATTGGAATGGTTCTCTCTAAAGAGCACACAATATTGTTTTTCCAGATaGCAATCAAAACCATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: AGVSIIWELEWFSLKSTQYCFSR*QSKPSG Trigger: ACCTGATGGTTTTGATTGCCATCTGGAAAAACAATA...TTGTGTGCTCTTTAGAGAGAACCATTCCAATTCCCATATGATGGACACTCCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CAA 90 bp | GGGGTAGCGGCATCCGAAGGCAGTGCACCGTGTCAGCAGCTTGGTACATTCAGAGAGGCCTGGGTCCCCTaGCCCTTGACTAGACAGCCG | + |
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Preference number: 5 (lower is better) Translates to: GVAASEGSAPCQQLGTFREAWVP*PLTRQP Trigger: CGGCTGTCTAGTCAAGGGCAAGGGGACCCAGGCCTC...TCTGAATGTACCAAGCTGCTGACACGGTGCACTGCCTTCGGATGCCGCTACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CAA 90 bp | CTGGGAAATGGCTCCCCTGGGATGCCCTGTGCCTACGTAAATGCCACAGAGGGCATGGATCTCTCAGAGTaGTGGTTGGCCACCCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LGNGSPGMPCAYVNATEGMDLSE*WLATLR Trigger: CCGCAGGGTGGCCAACCACAACTCTGAGAGATCCAT...GCCCTCTGTGGCATTTACGTAGGCACAGGGCATCCCAGGGGAGCCATTTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CAA 90 bp | TGGGAAGGGGACATGACCTTATCACATGCTGAACCTGGGACAGCAGTGTGGGCACGGGGCAGGTCTTCCTaGACCTTCGGAGAGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: WEGDMTLSHAEPGTAVWARGRSS*TFGEWL Trigger: CAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCG...TGCCCACACTGCTGTCCCAGGTTCAGCATGTGATAAGGTCATGTCCCCTTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS TCA 90 bp | ACAGGGTTCATGGCCGAGTTGAGGACAGCCAGCATGATGAACCACTaGCTCTTGAAGAGGATGGAGCACTCCTTTGCCCTGCAGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: TGFMAELRTASMMNH*LLKRMEHSFALQAT Trigger: CGTGGCCTGCAGGGCAAAGGAGTGCTCCATCCTCTTCAAGAGTCAGTGGTTCATCATGCTGGCTGTCCTCAACTCGGCCATGAACCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CAA 90 bp | GAGTTGAGAAGCTTTGCTGACAGCTCCAGCTCCTTGCCAGCAAAGGGTGACAGCTTGACTTACTTCTGCTaGGGTCGAGGGCAGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ELRSFADSSSSLPAKGDSLTYFC*GRGQAA Trigger: TGCAGCCTGCCCTCGACCCAAGCAGAAGTAAGTCAA...GCTGTCACCCTTTGCTGGCAAGGAGCTGGAGCTGTCAGCAAAGCTTCTCAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CAA 90 bp | TCCGAAGGCAGTGCACCGTGTCAGCAGCTTGGTACATTCAGAAGGATGGAGCCCGGAGAGTGGCTGCTGTaGTTACTGGAGCTTGACTTA | + |
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Preference number: 5 (lower is better) Translates to: SEGSAPCQQLGTFRRMEPGEWLL*LLELDL Trigger: TAAGTCAAGCTCCAGTAACAACAGCAGCCACTCTCC...GGGCTCCATCCTTCTGAATGTACCAAGCTGCTGACACGGTGCACTGCCTTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CCA 90 bp | GCCCAGGGCTACGAACATACTGCCCTCCCTGAGGAACCACACTGTTaGAGACAGACTGAACGTCTTCCTGCCGGACATAAGAATATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AQGYEHTALPEEPHC*RQTERLPAGHKNID Trigger: GTCAATATTCTTATGTCCGGCAGGAAGACGTTCAGTCTGTCTCCAACAGTGTGGTTCCTCAGGGAGGGCAGTATGTTCGTAGCCCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CAA 90 bp | ACACCAGTGCAAGGGCACTGGGAAGGGGACATGACCTTATCACATGCTGAACCTACGCGGTGCTTCTTGTaGGCATCATATGGCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TPVQGHWEGDMTLSHAEPTRCFL*ASYGLI Trigger: GATGAGGCCATATGATGCCAACAAGAAGCACCGCGT...AGGTTCAGCATGTGATAAGGTCATGTCCCCTTCCCAGTGCCCTTGCACTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS GCA 90 bp | CAGCATGATGAACCACTGACTCTTGAAGAGGATGGAGCACTCCTTTaGCCTGCAGGCCACGTCGATGAGGAAGAGGATAAAAAGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QHDEPLTLEEDGALL*PAGHVDEEEDKKWG Trigger: TCCCCACTTTTTATCCTCTTCCTCATCGACGTGGCCTGCAGGGCAAAGGAGTGCTCCATCCTCTTCAAGAGTCAGTGGTTCATCATGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CCA 90 bp | CTCCTTTGCCCTGCAGGCCACGTCGATGAGGAAGAGGATAAAAAGTaGGGACCAACAGGCAATGAACACACTCACCACAATCACTACGGT | + |
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Preference number: 5 (lower is better) Translates to: LLCPAGHVDEEEDKK*GPTGNEHTHHNHYG Trigger: ACCGTAGTGATTGTGGTGAGTGTGTTCATTGCCTGTTGGTCCCCACTTTTTATCCTCTTCCTCATCGACGTGGCCTGCAGGGCAAAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CCA 90 bp | CATCCCAATCAGAAGGAACACGCGGTGCTTCTTGTTGGCATCATATaGCCTCATCTTGATCATGGTCAGGTGTCGCTCAATGGCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPNQKEHAVLLVGII*PHLDHGQVSLNGNG Trigger: GCCATTGCCATTGAGCGACACCTGACCATGATCAAGATGAGGCCATATGATGCCAACAAGAAGCACCGCGTGTTCCTTCTGATTGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS GCA 90 bp | GAGAAGGCAATTAGCCAGCACATCCCAATCAGAAGGAACACGCGGTaGTTCTTGTTGGCATCATATGGCCTCATCTTGATCATGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EKAISQHIPIRRNTR*FLLASYGLILIMVR Trigger: CCTGACCATGATCAAGATGAGGCCATATGATGCCAACAAGAAGCACCGCGTGTTCCTTCTGATTGGGATGTGCTGGCTAATTGCCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CAA 90 bp | GGGTTCCACCTGGGAAAATCAATCGTATACATCCTGTACAACACAGCAACGAACTGTTGTTACTGGAGCTaGACTTACTTCTGCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GFHLGKSIVYILYNTATNCCYWS*TYFCLG Trigger: ACCCAAGCAGAAGTAAGTCAAGCTCCAGTAACAACA...GTTCGTTGCTGTGTTGTACAGGATGTATACGATTGATTTTCCCAGGTGGAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS-3UTR CAA 90 bp | AGTGTATTTTTATTTTCAGTTGCTTGGCAGTCTGTCATGCTACAAATGTCACCTATAAGAATATTGACCTaGTATGCTATGCCGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVFLFSVAWQSVMLQMSPIRILT*YAMPAS Trigger: GCTGGCCGGCATAGCATACAAGGTCAATATTCTTAT...AGGTGACATTTGTAGCATGACAGACTGCCAAGCAACTGAAAATAAAAATACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS TCA 72 bp | CAGGCTGCATGGGTGAGGCCTGGGTCCCCTTGCCCTTaGCTAGACAGCCGCACACCAACCGGAAGAAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: QAAWVRPGSPCP*LDSRTPTGRRR Trigger: GCGCCTTCTTCCGGTTGGTGTGCGGCTGTCTAGTCAAGGGCAAGGGGACCCAGGCCTCACCCATGCAGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 72 bp | GCAGGCTGCATGGGTGAGGCCTGGGTCCCCTTGCCCTaGACTAGACAGCCGCACACCAACCGGAAGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: AGCMGEAWVPLP*TRQPHTNRKKA Trigger: CGCCTTCTTCCGGTTGGTGTGCGGCTGTCTAGTCAAGGGCAAGGGGACCCAGGCCTCACCCATGCAGCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CCA 72 bp | ACGGTCCGCAGAAGGGCCATGGATCTCTCAGAGTTGTaGTTGGCCACCCTGCGGCTGCTGGACTTGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVRRRAMDLSEL*LATLRLLDLTR Trigger: CCTGGTCAAGTCCAGCAGCCGCAGGGTGGCCAACCACAACTCTGAGAGATCCATGGCCCTTCTGCGGACCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 72 bp | GTCCGCAGAAGGGCCATGGATCTCTCAGAGTTGTGGTaGGCCACCCTGCGGCTGCTGGACTTGACCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VRRRAMDLSELW*ATLRLLDLTRQ Trigger: CTGCCTGGTCAAGTCCAGCAGCCGCAGGGTGGCCAACCACAACTCTGAGAGATCCATGGCCCTTCTGCGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 72 bp | ACTACGGTCCGCAGAAGGGCCATGGATCTCTCAGAGTaGTGGTTGGCCACCCTGCGGCTGCTGGACTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: TTVRRRAMDLSE*WLATLRLLDLT Trigger: GGTCAAGTCCAGCAGCCGCAGGGTGGCCAACCACAACTCTGAGAGATCCATGGCCCTTCTGCGGACCGTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 90 bp | GCCACGCGGGGCAGGTCTTCCTTGACCTTCGGAGAGTGGCTGCTGTaGTTACTGGAGCTTGACTTACTTCTGCTTGGGTCGAGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATRGRSSLTFGEWLL*LLELDLLLLGSRAG Trigger: GCCTGCCCTCGACCCAAGCAGAAGTAAGTCAAGCTCCAGTAACAACAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCGCGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CCA 72 bp | CACTCACCACAATCACTACGGTCCGCAGAAGGGCCATaGATCTCTCAGAGTTGTGGTTGGCCACCCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: HSPQSLRSAEGP*ISQSCGWPPCG Trigger: GCCGCAGGGTGGCCAACCACAACTCTGAGAGATCCATGGCCCTTCTGCGGACCGTAGTGATTGTGGTGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 72 bp | ATGCAGGAAGAAGTAGCCACGCGGGGCAGGTCTTCCTaGACCTTCGGAGAGTGGCTGCTGTTGTTACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: MQEEVATRGRSS*TFGEWLLLLLE Trigger: CTCCAGTAACAACAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCGCGTGGCTACTTCTTCCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS TCA 72 bp | GACCTTCGGAGAGTGGCTGCTGTTGTTACTGGAGCTTaGCTTACTTCTGCTTGGGTCGAGGGCAGGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DLRRVAAVVTGA*LTSAWVEGRLH Trigger: ATGCAGCCTGCCCTCGACCCAAGCAGAAGTAAGTCAAGCTCCAGTAACAACAGCAGCCACTCTCCGAAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS TCA 72 bp | ATGGCCGAGTTGAGGACAGCCAGCATGATGAACCACTaGCTCTTGAAGAGGATGGAGCACTCCTTTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MAELRTASMMNH*LLKRMEHSFAL Trigger: CAGGGCAAAGGAGTGCTCCATCCTCTTCAAGAGTCAGTGGTTCATCATGCTGGCTGTCCTCAACTCGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 72 bp | GGCAGGTCTTCCTTGACCTTCGGAGAGTGGCTGCTGTaGTTACTGGAGCTTGACTTACTTCTGCTTGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GRSSLTFGEWLL*LLELDLLLLGS Trigger: CGACCCAAGCAGAAGTAAGTCAAGCTCCAGTAACAACAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS TCA 72 bp | CGCGGTGCTTCTTGTTGGCATCATATGGCCTCATCTTaGTCATGGTCAGGTGTCGCTCAATGGCAATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RGASCWHHMASS*SWSGVAQWQWP Trigger: TGGCCATTGCCATTGAGCGACACCTGACCATGATCAAGATGAGGCCATATGATGCCAACAAGAAGCACCGCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS GCA 72 bp | GAACCACTGACTCTTGAAGAGGATGGAGCACTCCTTTaGCCTGCAGGCCACGTCGATGAGGAAGAGGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: EPLTLEEDGALL*PAGHVDEEEDK Trigger: TTTATCCTCTTCCTCATCGACGTGGCCTGCAGGGCAAAGGAGTGCTCCATCCTCTTCAAGAGTCAGTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 72 bp | GACAGACTGAACGTCTTCCTGCCGGACATAAGAATATaGACCTTGTATGCTATGCCGGCCAGCAGGTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DRLNVFLPDIRI*TLYAMPASRSQ Trigger: CTGCGACCTGCTGGCCGGCATAGCATACAAGGTCAATATTCTTATGTCCGGCAGGAAGACGTTCAGTCTGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 72 bp | ACGCGGTGCTTCTTGTTGGCATCATATGGCCTCATCTaGATCATGGTCAGGTGTCGCTCAATGGCAATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRCFLLASYGLI*IMVRCRSMAMA Trigger: GGCCATTGCCATTGAGCGACACCTGACCATGATCAAGATGAGGCCATATGATGCCAACAAGAAGCACCGCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 90 bp | ACTGTTGGAGACAGACTGAACGTCTTCCTGCCGGACATAAGAATATaGACCTTGTATGCTATGCCGGCCAGCAGGTCGCAGAGAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TVGDRLNVFLPDIRI*TLYAMPASRSQRAK Trigger: CTTGGCTCTCTGCGACCTGCTGGCCGGCATAGCATACAAGGTCAATATTCTTATGTCCGGCAGGAAGACGTTCAGTCTGTCTCCAACAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 90 bp | TTGTCAATGATGCAGGAAGAAGTAGCCACGCGGGGCAGGTCTTCCTaGACCTTCGGAGAGTGGCTGCTGTTGTTACTGGAGCTTGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: LSMMQEEVATRGRSS*TFGEWLLLLLELDL Trigger: TAAGTCAAGCTCCAGTAACAACAGCAGCCACTCTCCGAAGGTCAAGGAAGACCTGCCCCGCGTGGCTACTTCTTCCTGCATCATTGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 90 bp | GCAATTAGCCAGCACATCCCAATCAGAAGGAACACGCGGTGCTTCTaGTTGGCATCATATGGCCTCATCTTGATCATGGTCAGGTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: AISQHIPIRRNTRCF*LASYGLILIMVRCR Trigger: GCGACACCTGACCATGATCAAGATGAGGCCATATGATGCCAACAAGAAGCACCGCGTGTTCCTTCTGATTGGGATGTGCTGGCTAATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CCA 72 bp | CCTGCAGGCCACGTCGATGAGGAAGAGGATAAAAAGTaGGGACCAACAGGCAATGAACACACTCACCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: PAGHVDEEEDKK*GPTGNEHTHHN Trigger: ATTGTGGTGAGTGTGTTCATTGCCTGTTGGTCCCCACTTTTTATCCTCTTCCTCATCGACGTGGCCTGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS CAA 90 bp | ATTAGCCAGCACATCCCAATCAGAAGGAACACGCGGTGCTTCTTGTaGGCATCATATGGCCTCATCTTGATCATGGTCAGGTGTCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISQHIPIRRNTRCFL*ASYGLILIMVRCRS Trigger: TGAGCGACACCTGACCATGATCAAGATGAGGCCATATGATGCCAACAAGAAGCACCGCGTGTTCCTTCTGATTGGGATGTGCTGGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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| CDS GCA 72 bp | ATTAGCCAGCACATCCCAATCAGAAGGAACACGCGGTaGTTCTTGTTGGCATCATATGGCCTCATCTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: ISQHIPIRRNTR*FLLASYGLILI Trigger: GATCAAGATGAGGCCATATGATGCCAACAAGAAGCACCGCGTGTTCCTTCTGATTGGGATGTGCTGGCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087978.5 |
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