Pregenerated sensors for S1PR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043895Ensembl transcript IDs: ENSMUST00000054197.7
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACAGCATGCAATTCCAGCTCAGACAGAGCTAAGAGTGAGGGAGTaGGGGATGGCTGGGGTGCCTTGGCAGGCCACGAATGGTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: PQHAIPAQTELRVRE*GMAGVPWQATNGQK Trigger: TTTCTGACCATTCGTGGCCTGCCAAGGCACCCCAGCCATCCCCCACTCCCTCACTCTTAGCTCTGTCTGAGCTGGAATTGCATGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR TCA 90 bp | GCCTCACCTGATCCCTCTCGGCTCACCAATAAAGCGAGTGGCCAGTaGGATCTGAAAATAAAGACTGGGATGCCAGGCCTCCTCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: ASPDPSRLTNKASGQ*DLKIKTGMPGLLPA Trigger: GGCAGGGAGGAGGCCTGGCATCCCAGTCTTTATTTTCAGATCTCACTGGCCACTCGCTTTATTGGTGAGCCGAGAGGGATCAGGTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | AGTGAGGGAGTGGGGGATGGCTGGGGTGCCTTGGCAGGCCACGAATaGTCAGAAATTTCTGCCTTCCACACACACACACTCACACACACA | + |
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Preference number: 1 (lower is better) Translates to: SEGVGDGWGALAGHE*SEISAFHTHTLTHT Trigger: TGTGTGTGTGAGTGTGTGTGTGTGGAAGGCAGAAATTTCTGACCATTCGTGGCCTGCCAAGGCACCCCAGCCATCCCCCACTCCCTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | AATTCCAGCTCAGACAGAGCTAAGAGTGAGGGAGTGGGGGATGGCTaGGGTGCCTTGGCAGGCCACGAATGGTCAGAAATTTCTGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: NSSSDRAKSEGVGDG*GALAGHEWSEISAF Trigger: GAAGGCAGAAATTTCTGACCATTCGTGGCCTGCCAAGGCACCCCAGCCATCCCCCACTCCCTCACTCTTAGCTCTGTCTGAGCTGGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR TCA 90 bp | ACAACAACCACCTACCACTCCCGCTCCCACCAGATTCAATTCCTCTaGCTTCCTGGACACCTACCCTCACATGCACACACGTGCATGCGT | + |
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Preference number: 1 (lower is better) Translates to: TTTTYHSRSHQIQFL*LPGHLPSHAHTCMR Trigger: ACGCATGCACGTGTGTGCATGTGAGGGTAGGTGTCCAGGAAGTCAGAGGAATTGAATCTGGTGGGAGCGGGAGTGGTAGGTGGTTGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | ACCAGGCTAGCCTTGAAGACCTGCCTGCCTCTGCCTCCCAAGTCTTaGGTTTATAGGCATGATCCAAGTGCTGATTGGTACCTGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TRLALKTCLPLPPKS*VYRHDPSADWYLWS Trigger: GCTCCACAGGTACCAATCAGCACTTGGATCATGCCTATAAACCCAAGACTTGGGAGGCAGAGGCAGGCAGGTCTTCAAGGCTAGCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR TCA 90 bp | CCACCATGCCCAGTTCCTCCATGCCCAGCTCCTCTCTTTATGTATTaGAGCAGGATCTTTCTTGGTCTGCTTGGAGACTGCTTGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: PPCPVPPCPAPLFMY*SRIFLGLLGDCLPP Trigger: TGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGATCCTGCTTCAATACATAAAGAGAGGAGCTGGGCATGGAGGAACTGGGCATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR TCA 90 bp | TCCGGCAAGAGCTTAAACGTGGTCTCCTGTAGCTCAGGGTGGCCTTaGACTCACTGTGTAGCTGAGGCTGACCTTGACCTACTTACTGAT | + |
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Preference number: 1 (lower is better) Translates to: SGKSLNVVSCSSGWP*THCVAEADLDLLTD Trigger: ATCAGTAAGTAGGTCAAGGTCAGCCTCAGCTACACAGTGAGTTCAAGGCCACCCTGAGCTACAGGAGACCACGTTTAAGCTCTTGCCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | CTGCCTCCCAAGTCTTGGGTTTATAGGCATGATCCAAGTGCTGATTaGTACCTGTGGAGCCCAGAAGAAGGTAGTGGCTTTCCTGGGACT | + |
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Preference number: 1 (lower is better) Translates to: LPPKSWVYRHDPSAD*YLWSPEEGSGFPGT Trigger: AGTCCCAGGAAAGCCACTACCTTCTTCTGGGCTCCACAGGTACCAATCAGCACTTGGATCATGCCTATAAACCCAAGACTTGGGAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR TCA 90 bp | TCATTCATGGCAATTTTCAAGACAGGTGGTGGTGGTACACCCCTGTaGTACAGATACTGGCACTCCAGAAGTGGAGGCAGGAGGATCGGA | + |
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Preference number: 1 (lower is better) Translates to: SFMAIFKTGGGGTPL*YRYWHSRSGGRRIG Trigger: TCCGATCCTCCTGCCTCCACTTCTGGAGTGCCAGTATCTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGCCATGAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR GCA 90 bp | GGGAAAAGGTCAAGGTTGGCCAGTTATTTCTCAGAAGCCACAGCATaGAATTCCAGCTCAGACAGAGCTAAGAGTGAGGGAGTGGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GKRSRLASYFSEATA*NSSSDRAKSEGVGD Trigger: ATCCCCCACTCCCTCACTCTTAGCTCTGTCTGAGCTGGAATTGCATGCTGTGGCTTCTGAGAAATAACTGGCCAACCTTGACCTTTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | TCCATGCCCAGCTCCTCTCTTTATGTATTGAAGCAGGATCTTTCTTaGTCTGCTTGGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: SMPSSSLYVLKQDLS*SAWRLLASTSPVQR Trigger: TCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGATCCTGCTTCAATACATAAAGAGAGGAGCTGGGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR TCA 90 bp | AGGCCAGGCTGGAAAGACCCTGTGTGTGTGTGTGTCTACAATAGCTaGATTCACAGATGCAAGTGCTTGTGTAGAGAGGTTGACTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: RPGWKDPVCVCVYNS*IHRCKCLCREVDFR Trigger: CCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAATTCAGCTATTGTAGACACACACACACACAGGGTCTTTCCAGCCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | AACCACCAGCAGCAAGAGAAATTGAACTGTTTATTGGCCCAGATCTaGGTTTCCAGCACAAGGAGGACATCTGGGAAGCTATATGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: NHQQQEKLNCLLAQI*VSSTRRTSGKLYEG Trigger: CCCCTCATATAGCTTCCCAGATGTCCTCCTTGTGCTGGAAACCCAGATCTGGGCCAATAAACAGTTCAATTTCTCTTGCTGCTGGTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR TCA 90 bp | CACACACACACACACACACACATAACCACCAGCAGCAAGAGAAATTaGACTGTTTATTGGCCCAGATCTGGGTTTCCAGCACAAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHITTSSKRN*TVYWPRSGFPAQGG Trigger: TCCTCCTTGTGCTGGAAACCCAGATCTGGGCCAATAAACAGTTCAATTTCTCTTGCTGCTGGTGGTTATGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR GCA 90 bp | GACCAACACAAAATCAGAGACAACATAGGGGTTAAGAGAGCTTACTaGTGTTACAGAGGACATGGGTTCGGTTCCCAACACCCACATCAG | + |
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Preference number: 1 (lower is better) Translates to: DQHKIRDNIGVKRAY*CYRGHGFGSQHPHQ Trigger: CTGATGTGGGTGTTGGGAACCGAACCCATGTCCTCTGTAACAGCAGTAAGCTCTCTTAACCCCTATGTTGTCTCTGATTTTGTGTTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | GGCTATGTGAACTATGTCATTCATGGCAATTTTCAAGACAGGTGGTaGTGGTACACCCCTGTGATACAGATACTGGCACTCCAGAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: GYVNYVIHGNFQDRW*WYTPVIQILALQKW Trigger: CCACTTCTGGAGTGCCAGTATCTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGCCATGAATGACATAGTTCACATAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | AGGGAAGATGCAGTAAGAGTACCCAGGAGTGTCCTTGGCCACCCATaGCTATGTGAACTATGTCATTCATGGCAATTTTCAAGACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: REDAVRVPRSVLGHP*LCELCHSWQFSRQV Trigger: CACCTGTCTTGAAAATTGCCATGAATGACATAGTTCACATAGCCATGGGTGGCCAAGGACACTCCTGGGTACTCTTACTGCATCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR GCA 90 bp | TTTTCTATTTCTCCACAGGATTTAGCAAAGTCCTTCAAGGGAAGATaGAGTAAGAGTACCCAGGAGTGTCCTTGGCCACCCATGGCTATG | + |
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Preference number: 1 (lower is better) Translates to: FSISPQDLAKSFKGR*SKSTQECPWPPMAM Trigger: CATAGCCATGGGTGGCCAAGGACACTCCTGGGTACTCTTACTGCATCTTCCCTTGAAGGACTTTGCTAAATCCTGTGGAGAAATAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | TATGTGAACTATGTCATTCATGGCAATTTTCAAGACAGGTGGTGGTaGTACACCCCTGTGATACAGATACTGGCACTCCAGAAGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: YVNYVIHGNFQDRWW*YTPVIQILALQKWR Trigger: CCTCCACTTCTGGAGTGCCAGTATCTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGCCATGAATGACATAGTTCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | CATGGCTATGTGAACTATGTCATTCATGGCAATTTTCAAGACAGGTaGTGGTGGTACACCCCTGTGATACAGATACTGGCACTCCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: HGYVNYVIHGNFQDR*WWYTPVIQILALQK Trigger: CTTCTGGAGTGCCAGTATCTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGCCATGAATGACATAGTTCACATAGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | CATGCAAAACAGGCCAATTACAACCACCATAGAATCCAATGCCCCTaGCCTGCTCAGGCACTACAAGCACAGGTATACCAGAATATCATA | + |
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Preference number: 1 (lower is better) Translates to: HAKQANYNHHRIQCP*PAQALQAQVYQNII Trigger: TATGATATTCTGGTATACCTGTGCTTGTAGTGCCTGAGCAGGCCAGGGGCATTGGATTCTATGGTGGTTGTAATTGGCCTGTTTTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CCA 90 bp | AATGCTTGCCTTTATTATTTTATGTGTACAAGAGCTTTGCCAGAGTaGGTAGCACATACATGTTTGGTGTTGTGGCGGTCAGAAGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: NACLYYFMCTRALPE*VAHTCLVLWRSEVA Trigger: GGCAACTTCTGACCGCCACAACACCAAACATGTATGTGCTACCCACTCTGGCAAAGCTCTTGTACACATAAAATAATAAAGGCAAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR GCA 90 bp | TTAAATTCAGAAGTGTTTGACATTCTCATTTCTTCACTCTGTGTATaGACAGGAACATGTGTCACAATACACACTGAAGTCAGAGAACCT | + |
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Preference number: 1 (lower is better) Translates to: LNSEVFDILISSLCV*TGTCVTIHTEVREP Trigger: AGGTTCTCTGACTTCAGTGTGTATTGTGACACATGTTCCTGTGCATACACAGAGTGAAGAAATGAGAATGTCAAACACTTCTGAATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR GCA 90 bp | CATGGTCGTGATGGACTACGAGGCCTTGTGTGTGCTTGGCCAGAGCTGTGTCACGGGGGATGGCTGGGGTaGCTTGGCAGGCCACGAATG | + |
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Preference number: 2 (lower is better) Translates to: HGRDGLRGLVCAWPELCHGGWLG*LGRPRM Trigger: CATTCGTGGCCTGCCAAGGCACCCCAGCCATCCCCC...GTGACACAGCTCTGGCCAAGCACACACAAGGCCTCGTAGTCCATCACGACCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR GCA 90 bp | TCGGTTCCCAACACCCACATCAGGCAGTTCACAACAACCACCTACCACTCCCGCAGCTCAAGGCTGCCCTaGCTTAAGGGCCGTGGTACC | + |
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Preference number: 2 (lower is better) Translates to: SVPNTHIRQFTTTTYHSRSSRLP*LKGRGT Trigger: GGTACCACGGCCCTTAAGGCAGGGCAGCCTTGAGCT...GCGGGAGTGGTAGGTGGTTGTTGTGAACTGCCTGATGTGGGTGTTGGGAACCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | CCGTGCTGGGACAGGGTGCAGGACTTTAGGTGTACCAGCGAGCCAGCGAGCGAGCTTTCTTGGTCTGCTTaGAGACTGCTTGCCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: PCWDRVQDFRCTSEPASELSWSA*RLLAST Trigger: AGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAG...CTCGCTCGCTGGCTCGCTGGTACACCTAAAGTCCTGCACCCTGTCCCAGCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCTTAGAGACCCTTCCCTCTGGGCAGCATCGAGGCAGGGCTGCTCAGCTGACAGCACAGACAAGTTaGAAGCAGCCACATCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RLLETLPSGQHRGRAAQLTAQTS*KQPHPA Trigger: AGCTGGATGTGGCTGCTTGCAACTTGTCTGTGCTGT...CAGCTGAGCAGCCCTGCCTCGATGCTGCCCAGAGGGAAGGGTCTCTAAGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAAGGTTAGAGACATCTGCAAGAGGACAGAGGACACAGGCCTTCACCCTAGGAGTGGGGGATGGCTaGGGTGCCTTGGCAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: IQRLETSARGQRTQAFTLGVGDG*GALAGH Trigger: GTGGCCTGCCAAGGCACCCCAGCCATCCCCCACTCC...TAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR GCA 90 bp | AACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATATTCTAAGGCGTGCGCCACCATaGCCAGTTCCTCCATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: NSTFYPSSHHPAPAAHILRRAPP*PVPPCP Trigger: TGGGCATGGAGGAACTGGGCATGGTGGCGCACGCCT...TAGAATATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR TCA 90 bp | GTCATTCATGGCAATTTTCAAGACAGGTGGTGGTGGTACACCCCTGTGATACAGGGGGCAGGAGCTGGGTaGGCTGCTACCCAACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VIHGNFQDRWWWYTPVIQGAGAG*AATQPS Trigger: TGAGGGTTGGGTAGCAGCTCACCCAGCTCCTGCCCC...CTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGCCATGAATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | TTGAACAACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATGAGAAAGGCTGGGTGTaGGGGGAGGAGTTCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LNNSTFYPSSHHPAPAAHEKGWV*GEEFQE Trigger: TTCCTGGAACTCCTCCCCCCACACCCAGCCTTTCTC...ATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTTGTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTCTTGGTCTGCTTGGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAGATGTCTTGGCTACACAGTaGGCTGGAGACCAACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: IFLGLLGDCLPPLPQCRDVLATQ*AGDQPG Trigger: CCCAGGTTGGTCTCCAGCTCACTGTGTAGCCAAGAC...ATCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR TCA 90 bp | GATGAAGATGTAGTCAGGGCATGCTCCTCAGAGGAGGGGGCACTAACCAGAGCCTGGATGGCTCAGAAATaGCCACTGTTGGGTAACCTG | + |
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Preference number: 2 (lower is better) Translates to: DEDVVRACSSEEGALTRAWMAQK*PLLGNL Trigger: CAGGTTACCCAACAGTGGTCATTTCTGAGCCATCCA...GGCTCTGGTTAGTGCCCCCTCCTCTGAGGAGCATGCCCTGACTACATCTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | AACCACCATAGAATCCAATGCCCCTGGCCTGCTCAGGCACTACAAGCACAGGTACATCATGAGGTCACCTaGTCTCTCCCCACAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: NHHRIQCPWPAQALQAQVHHEVT*SLPTEL Trigger: GAGCTCTGTGGGGAGAGACCAGGTGACCTCATGATG...TACCTGTGCTTGTAGTGCCTGAGCAGGCCAGGGGCATTGGATTCTATGGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | TGCTCATATTCTAATGGTGAGACAGGTGATGTGCAGAGGAGCCGCGATGAAGATGAAGGGGGCAGGAGCTaGGTGAGCTGCTACCCAACC | + |
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Preference number: 2 (lower is better) Translates to: CSYSNGETGDVQRSRDEDEGGRS*VSCYPT Trigger: GGTTGGGTAGCAGCTCACCCAGCTCCTGCCCCCTTC...ATCTTCATCGCGGCTCCTCTGCACATCACCTGTCTCACCATTAGAATATGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | TTGAACAACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATAGACAGCACCCACACTaGGATAGGAGGTCACAGACC | + |
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Preference number: 2 (lower is better) Translates to: LNNSTFYPSSHHPAPAAHRQHPH*DRRSQT Trigger: GGTCTGTGACCTCCTATCCCAGTGTGGGTGCTGTCT...ATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTTGTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | GATGAAGATGTAGTCAGGGCATGCTCCTCAGAGGAGGGGGCACTAACCAGAGCCTTATTGGCCCAGATCTaGGTTTCCAGCACAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: DEDVVRACSSEEGALTRALLAQI*VSSTRR Trigger: CCTCCTTGTGCTGGAAACCCAGATCTGGGCCAATAA...GGCTCTGGTTAGTGCCCCCTCCTCTGAGGAGCATGCCCTGACTACATCTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCTTAGAGACCCTTCCCTCTGGGCAGCATCGAGGCAGGGCTGCTCAGCTGGGAAAAGGTCAAGGTTaGCCAGTTATTTCTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RLLETLPSGQHRGRAAQLGKGQG*PVISQK Trigger: CTTCTGAGAAATAACTGGCCAACCTTGACCTTTTCC...CAGCTGAGCAGCCCTGCCTCGATGCTGCCCAGAGGGAAGGGTCTCTAAGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 90 bp | GCCACCATGCCCAGTTCCTCCATGCCCAGCTCCTCTCTTTATGTATaGAAGCAGGATCTTTCTTGGTCTGCTTGGAGACTGCTTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ATMPSSSMPSSSLYV*KQDLSWSAWRLLAS Trigger: GGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGATCCTGCTTCAATACATAAAGAGAGGAGCTGGGCATGGAGGAACTGGGCATGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR GCA 90 bp | CATGGTCGTGATGGACTACGAGGCCTTGTGTGTGCTTGGCCAGAGCTGTGTCACTCCTTCAAGGGAAGATaGAGTAAGAGTACCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: HGRDGLRGLVCAWPELCHSFKGR*SKSTQE Trigger: CTCCTGGGTACTCTTACTGCATCTTCCCTTGAAGGA...GTGACACAGCTCTGGCCAAGCACACACAAGGCCTCGTAGTCCATCACGACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR GCA 90 bp | GATGAAGATGTAGTCAGGGCATGCTCCTCAGAGGAGGGGGCACTAACCAGAGCCACACTATCACGTGGTTaGTACAGATGCAGCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: DEDVVRACSSEEGALTRATLSRG*YRCSSG Trigger: ACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGT...GGCTCTGGTTAGTGCCCCCTCCTCTGAGGAGCATGCCCTGACTACATCTTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | TGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCTGCTTCGGAGAGATGGTTCCATaGTTAGGAGCACTTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CRPGWPQTQKSTCLCLCFGEMVP*LGALPA Trigger: AGCAGGAAGTGCTCCTAACCATGGAACCATCTCTCC...GAAGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR TCA 90 bp | GATGAAGATGTAGTCAGGGCATGCTCCTCAGAGGAGGGGGCACTAACCAGAGCCCAAAAGCCCTGGGCTTaGTTCCAAGCATTAGATAGA | + |
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Preference number: 2 (lower is better) Translates to: DEDVVRACSSEEGALTRAQKPWA*FQALDR Trigger: TCTATCTAATGCTTGGAATCAAGCCCAGGGCTTTTG...GGCTCTGGTTAGTGCCCCCTCCTCTGAGGAGCATGCCCTGACTACATCTTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR GCA 90 bp | ATCCAAAGGTTAGAGACATCTGCAAGAGGACAGAGGACACAGGCCTTCACCCTAAGTCTCCTCAACAGCTaGCCCATACTGCCTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: IQRLETSARGQRTQAFTLSLLNS*PILPHL Trigger: CAGGTGAGGCAGTATGGGGCAGCTGTTGAGGAGACT...TAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGGAGTGGGGGATGGCTGGGGTGCCTTGGCAGGCCACGAATGGTCAGAAAGAACTATGTCATTCATaGCAATTTTCAAGACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VREWGMAGVPWQATNGQKELCHS*QFSRQV Trigger: CACCTGTCTTGAAAATTGCCATGAATGACATAGTTC...TTTCTGACCATTCGTGGCCTGCCAAGGCACCCCAGCCATCCCCCACTCCCTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAATCATACTCAGGTCCTCTGAAAGAGCCGCCTGTACTCTTAATCACTTACTGGAGGCTGGAGGCTaGAGGCAAGAGGCTCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: PGIILRSSERAACTLNHLLEAGG*RQEAQP Trigger: TGGTTGAGCCTCTTGCCTCCAGCCTCCAGCCTCCAG...TAAGTGATTAAGAGTACAGGCGGCTCTTTCAGAGGACCTGAGTATGATTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGAATCATACTCAGGTCCTCTGAAAGAGCCGCCTGTACTCTTAATCACTTACCAGCACTTTGGAGGTaGGCGCAGGTGGAAGCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGIILRSSERAACTLNHLPALWR*AQVEAR Trigger: TCTAGCTTCCACCTGCGCTCACCTCCAAAGTGCTGG...TAAGTGATTAAGAGTACAGGCGGCTCTTTCAGAGGACCTGAGTATGATTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCTGCTTCCCGAGTGCTGGGACCTCTCTTTATGTATTaGAGCAGGATCTTTCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GLKLRNPPASASASRVLGPLFMY*SRIFLG Trigger: ACCAAGAAAGATCCTGCTTCAATACATAAAGAGAGG...TCCCAGCACTCGGGAAGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCTGCTTCGTCTTGATACAGATGTaGACAGAAGAGGTCAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: CRPGWPQTQKSTCLCLCFVLIQM*TEEVRQ Trigger: CTGTCTGACCTCTTCTGTGCACATCTGTATCAAGAC...GAAGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCACAGATGCAAGTGCTTGTGTAGAGAGGTTGACTTCAGGTATCCCGCTCTATTCCCGACAGGCTCCTTaGCTCCCAAATCTCCCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FTDASACVERLTSGIPLYSRQAP*LPNLPF Trigger: GAAGGGGAGATTTGGGAGGCAAGGAGCCTGTCGGGA...ATAGAGCGGGATACCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | TTGAACAACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATTCAGAAGCCACAGCATaGAATTCCAGCTCAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LNNSTFYPSSHHPAPAAHSEATA*NSSSDR Trigger: TCTGTCTGAGCTGGAATTGCATGCTGTGGCTTCTGA...ATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTTGTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CCA 90 bp | TCGGTTCCCAACACCCACATCAGGCAGTTCACAACAACCACCTACCACTCCCGCTTTCCCTTTTCTGGATaGCTCAGAAATGACCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: SVPNTHIRQFTTTTYHSRFPFSG*LRNDHC Trigger: ACAGTGGTCATTTCTGAGCCATCCAGAAAAGGGAAA...GCGGGAGTGGTAGGTGGTTGTTGTGAACTGCCTGATGTGGGTGTTGGGAACCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAATCATACTCAGGTCCTCTGAAAGAGCCGCCTGTACTCTTAATCACTTAGGTGAAGATTCTCACTaGAGGCTGGAGGCTGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PGIILRSSERAACTLNHLGEDSH*RLEAGG Trigger: GCCTCCAGCCTCCAGCCTCCAGTGAGAATCTTCACC...TAAGTGATTAAGAGTACAGGCGGCTCTTTCAGAGGACCTGAGTATGATTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CAA 90 bp | CAGCTCCTCTCTTTATGTATTGAAGCAGGATCTTTCTTGGTCTGCTaGGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAGATTGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: QLLSLCIEAGSFLVC*ETACLHFPSAEIAL Trigger: CAGTGCAATCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGATCCTGCTTCAATACATAAAGAGAGGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR TCA 90 bp | TTCACAGATGCAAGTGCTTGTGTAGAGAGGTTGACTTCAGGTATCCCGCTCTATGGTGGTACACCCCTGTaGTACAGATACTGGCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: FTDASACVERLTSGIPLYGGTPL*YRYWHS Trigger: GGAGTGCCAGTATCTGTATCACAGGGGTGTACCACC...ATAGAGCGGGATACCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | ATCCAAAGGTTAGAGACATCTGCAAGAGGACAGAGGACACAGGCCTTCACCCTAGTTAGGAGCACTTCCTaGTCTTCTGGAAGACCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IQRLETSARGQRTQAFTLVRSTS*SSGRPV Trigger: CACAGGTCTTCCAGAAGAGCAGGAAGTGCTCCTAAC...TAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCACAGATGCAAGTGCTTGTGTAGAGAGGTTGACTTCAGGTATCCCGCTCTATAAATCCACCTGCCTCTaGCTCTGCTTCCCGAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FTDASACVERLTSGIPLYKSTCL*LCFPSA Trigger: AGCACTCGGGAAGCAGAGGCAGAGGCAGGTGGATTT...ATAGAGCGGGATACCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CCA 90 bp | ATCCAAAGGTTAGAGACATCTGCAAGAGGACAGAGGACACAGGCCTTCACCCTATCTGAAAATAAAGACTaGGATGCCAGGCCTCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: IQRLETSARGQRTQAFTLSENKD*DARPPP Trigger: GGGAGGAGGCCTGGCATCCCAGTCTTTATTTTCAGA...TAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAATCATACTCAGGTCCTCTGAAAGAGCCGCCTGTACTCTTAATCACTTAGGAGGTGAGCGCAGGTaGAAGCTAGAGGATCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: PGIILRSSERAACTLNHLGGERR*KLEDPK Trigger: CTTAGGATCCTCTAGCTTCCACCTGCGCTCACCTCC...TAAGTGATTAAGAGTACAGGCGGCTCTTTCAGAGGACCTGAGTATGATTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR TCA 90 bp | CATGGTCGTGATGGACTACGAGGCCTTGTGTGTGCTTGGCCAGAGCTGTGTCACTCAGATCATTCTGCTTaGACAACAGTACTTTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: HGRDGLRGLVCAWPELCHSDHSA*TTVLFT Trigger: GGTAAAAAGTACTGTTGTTCAAGCAGAATGATCTGA...GTGACACAGCTCTGGCCAAGCACACACAAGGCCTCGTAGTCCATCACGACCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | GCACTGTTTTTACACTATCACGTGGTTGCTACAGATGCAGCTCTGGTCCTCACACAGTTTCTCCAGACCTaGAGCACTGAGGGACATCAT | + |
|
Preference number: 2 (lower is better) Translates to: ALFLHYHVVATDAALVLTQFLQT*STEGHH Trigger: ATGATGTCCCTCAGTGCTGCAGGTCTGGAGAAACTG...TGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAAACAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCACAGATGCAAGTGCTTGTGTAGAGAGGTTGACTTCAGGTATCCCGCTCTATCGTGGTTGCTACAGATaGAGCTCTGGTCCTCACACT | + |
|
Preference number: 2 (lower is better) Translates to: FTDASACVERLTSGIPLYRGCYR*SSGPHT Trigger: AGTGTGAGGACCAGAGCTGCATCTGTAGCAACCACG...ATAGAGCGGGATACCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGAATCATACTCAGGTCCTCTGAAAGAGCCGCCTGTACTCTTAATCACTTATGCCCAGTTCCTCCATaGCCAGCTCCTCTCTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: PGIILRSSERAACTLNHLCPVPP*PAPLFM Trigger: CATAAAGAGAGGAGCTGGGCATGGAGGAACTGGGCA...TAAGTGATTAAGAGTACAGGCGGCTCTTTCAGAGGACCTGAGTATGATTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAATCATACTCAGGTCCTCTGAAAGAGCCGCCTGTACTCTTAATCACTTAAGAATCCAATGCCCCTaGCCTGCTCAGGCACTACAA | + |
|
Preference number: 2 (lower is better) Translates to: PGIILRSSERAACTLNHLRIQCP*PAQALQ Trigger: TTGTAGTGCCTGAGCAGGCCAGGGGCATTGGATTCT...TAAGTGATTAAGAGTACAGGCGGCTCTTTCAGAGGACCTGAGTATGATTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CAA 90 bp | ACACACACACACACACACACACATAACCACCAGCAGCAAGAGAAATaGAACTGTTTATTGGCCCAGATCTGGGTTTCCAGCACAAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: THTHTHTHNHQQQEK*NCLLAQIWVSSTRR Trigger: CCTCCTTGTGCTGGAAACCCAGATCTGGGCCAATAAACAGTTCAATTTCTCTTGCTGCTGGTGGTTATGTGTGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTCTTGGTCTGCTTGGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAGATTTCCTTTCCCCGAATATaGAAGGAAAGAGAAGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SFLVCLETACLHFPSAEISFPRI*KEREEA Trigger: TGCTTCTTCTCTTTCCTTTCATATTCGGGGAAAGGA...AATCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGAATCATACTCAGGTCCTCTGAAAGAGCCGCCTGTACTCTTAATCACTTAGTACCTGGGATAGGATaGAGAGGTGATGAGCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: PGIILRSSERAACTLNHLVPGIG*RGDELM Trigger: CATGAGCTCATCACCTCTTCATCCTATCCCAGGTAC...TAAGTGATTAAGAGTACAGGCGGCTCTTTCAGAGGACCTGAGTATGATTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGAGGAGGGGGCACTAACCAGAGCCTAAATAGAGAAAACATGAGGGTATTTGAGGAGTGGGAGATATaGAAAGGGGTTGGAGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: LRGGGTNQSLNRENMRVFEEWEI*KGVGEM Trigger: CATCTCTCCAACCCCTTTTCATATCTCCCACTCCTC...AAATACCCTCATGTTTTCTCTATTTAGGCTCTGGTTAGTGCCCCCTCCTCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | AACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATATTCTAATGGTCAGAAATTTCTaGCTTCCACACACACACACT | + |
|
Preference number: 2 (lower is better) Translates to: NSTFYPSSHHPAPAAHILMVRNF*LPHTHT Trigger: AGTGTGTGTGTGTGGAAGGCAGAAATTTCTGACCAT...TAGAATATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAATCATACTCAGGTCCTCTGAAAGAGCCGCCTGTACTCTTAATCACTTACTACAGATGCAGCTCTaGTCCTCACACTTTCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: PGIILRSSERAACTLNHLLQMQL*SSHFHS Trigger: GCTGTGAAAGTGTGAGGACCAGAGCTGCATCTGTAG...TAAGTGATTAAGAGTACAGGCGGCTCTTTCAGAGGACCTGAGTATGATTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CCA 90 bp | ATCCAAAGGTTAGAGACATCTGCAAGAGGACAGAGGACACAGGCCTTCACCCTAACCCTTTGTATCAAGTaGCAAATGTCTAGCCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: IQRLETSARGQRTQAFTLTLCIK*QMSSPK Trigger: CTTAGGGCTAGACATTTGCCACTTGATACAAAGGGT...TAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTTTTTACACTATCACGTGGTTGCTACAGATGCAGCTCTGGTCCTCACACTTTGGCAGGCCACGAATaGTCAGAAATTTCTGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TVFTLSRGCYRCSSGPHTLAGHE*SEISAF Trigger: GAAGGCAGAAATTTCTGACCATTCGTGGCCTGCCAA...AGTGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAAACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGAGGAGGGGGCACTAACCAGAGCCTAAATAGAGAAAACATGAGGGTATTTATGGACTCTGTCAGTTaGCTGTTGCAGTATCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LRGGGTNQSLNRENMRVFMDSVS*LLQYPK Trigger: CTTTGGATACTGCAACAGGCAACTGACAGAGTCCAT...AAATACCCTCATGTTTTCTCTATTTAGGCTCTGGTTAGTGCCCCCTCCTCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CAA 90 bp | CAAGGAAAGAATGCTTGCCTTTATTATTTTATGTGTACAAGAGCTTaGCCAGAGTGGGTAGCACATACATGTTTGGTGTTGTGGCGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QGKNACLYYFMCTRA*PEWVAHTCLVLWRS Trigger: TGACCGCCACAACACCAAACATGTATGTGCTACCCACTCTGGCAAAGCTCTTGTACACATAAAATAATAAAGGCAAGCATTCTTTCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR GCA 90 bp | CCATCTTTACCTAAGGAGCCACCCCGCACCATGAAGTTTTATTCATTAATTAATAGGAAGAGGTTTCTATaGGTGGGAGAGATGAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: PSLPKEPPRTMKFYSLINRKRFL*VGEMNQ Trigger: CTGATTCATCTCTCCCACGCATAGAAACCTCTTCCT...ATTAATTAATGAATAAAACTTCATGGTGCGGGGTGGCTCCTTAGGTAAAGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CAA 90 bp | TCTACAATAGCTGAATTCACAGATGCAAGTGCTTGTGTAGAGAGGTaGACTTCAGGTATCCCGCTCTATCCCTCTCTTTGTTTATTTATT | + |
|
Preference number: 2 (lower is better) Translates to: STIAEFTDASACVER*TSGIPLYPSLCLFI Trigger: AATAAATAAACAAAGAGAGGGATAGAGCGGGATACCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAATTCAGCTATTGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CAA 90 bp | AGGTATCCCGCTCTATCCCTCTCTTTGTTTATTTATTTATTTATTTaGTTTTGTTTCGAGACAGGGTTTCTCTTTGTAGCCCTGGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RYPALSLSLFIYLFI*FCFETGFLFVALAV Trigger: GACAGCCAGGGCTACAAAGAGAAACCCTGTCTCGAAACAAAACAAAATAAATAAATAAATAAACAAAGAGAGGGATAGAGCGGGATACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | TCCCCGAGAGTGAGAGCCCAAAGTCTCCTCAACAGCTaGCCCATACTGCCTCACCTGATCCCTCTCGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPRVRAQSLLNS*PILPHLIPLGS Trigger: TGAGCCGAGAGGGATCAGGTGAGGCAGTATGGGGCAGCTGTTGAGGAGACTTTGGGCTCTCACTCTCGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCTTAGAGACCCTTCCCTCTGGGCAGCATCGAGGCAGGGCTGCTCAGCTGAACAGCACAGACAAGTaGCAAGCAGCCACATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLLETLPSGQHRGRAAQLNSTDK*QAATSS Trigger: GCTGGATGTGGCTGCTTGCAACTTGTCTGTGCTGTT...CAGCTGAGCAGCCCTGCCTCGATGCTGCCCAGAGGGAAGGGTCTCTAAGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | CCGTGCTGGGACAGGGTGCAGGACTTTAGGTGTACCAGCGAGCCAGCGAGCGAGTACACTATCACGTGGTaGCTACAGATGCAGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PCWDRVQDFRCTSEPASEYTITW*LQMQLW Trigger: CCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTA...CTCGCTCGCTGGCTCGCTGGTACACCTAAAGTCCTGCACCCTGTCCCAGCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTaGCTCTGCTTCCCGAGTGCTGGGATTAAAGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGWPQTQKSTCL*LCFPSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTCGGGAAGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | GTGGGGGATGGCTGGGGTGCCTTGGCAGGCCACGAATaGTCAGAAATTTCTGCCTTCCACACACACACACTC | + |
|
Preference number: 3 (lower is better) Translates to: VGDGWGALAGHE*SEISAFHTHTL Trigger: GAGTGTGTGTGTGTGGAAGGCAGAAATTTCTGACCATTCGTGGCCTGCCAAGGCACCCCAGCCATCCCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | GGTTTCCAGCACAAGGAGGACATCTGGGAAGCTATATaGGGGGAGACACACTCCCGACAGGCTCCTTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GFQHKEDIWEAI*GETHSRQAPCL Trigger: GAGGCAAGGAGCCTGTCGGGAGTGTGTCTCCCCTCATATAGCTTCCCAGATGTCCTCCTTGTGCTGGAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | AAGTTGCAAGCAGCCACATCCAGCTCAAGGCTGCCCTaGCTTAAGGGCCGTGGTACCTGGGATAGGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLQAATSSSRLP*LKGRGTWDRMK Trigger: CTTCATCCTATCCCAGGTACCACGGCCCTTAAGGCAGGGCAGCCTTGAGCTGGATGTGGCTGCTTGCAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | ACCTACCACTCCCGCTCCCACCAGATTCAATTCCTCTaGCTTCCTGGACACCTACCCTCACATGCACACACG | + |
|
Preference number: 3 (lower is better) Translates to: TYHSRSHQIQFL*LPGHLPSHAHT Trigger: CGTGTGTGCATGTGAGGGTAGGTGTCCAGGAAGTCAGAGGAATTGAATCTGGTGGGAGCGGGAGTGGTAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTaGCTCTGCCTCTGCTTCCCGAGTGCTGGGATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPQTQKST*LCLCFPSAGIK Trigger: TTTAATCCCAGCACTCGGGAAGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | AGGCAAGAGGCTCAACCAACACACAAAGGCAGCCACTaGAAGGAAACACAGCAAGTCACAGGCCTATGCGAC | + |
|
Preference number: 3 (lower is better) Translates to: RQEAQPTHKGSH*KETQQVTGLCD Trigger: GTCGCATAGGCCTGTGACTTGCTGTGTTTCCTTCCAGTGGCTGCCTTTGTGTGTTGGTTGAGCCTCTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCTTAGAGACCCTTCCCTCTGGGCAGCATCGAGGCAGGGCTGCTCAGCTGATCTTTCTAGCAGTCTaGATACAGATGTGCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLLETLPSGQHRGRAAQLIFLAV*IQMCTE Trigger: TTCTGTGCACATCTGTATCAAGACTGCTAGAAAGAT...CAGCTGAGCAGCCCTGCCTCGATGCTGCCCAGAGGGAAGGGTCTCTAAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACAACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATTCTTTCTTGGTCTGCTaGGAGACTGCTTGCCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LNNSTFYPSSHHPAPAAHSFLVC*ETACLH Trigger: GTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGA...ATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTTGTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAAAGGTTAGAGACATCTGCAAGAGGACAGAGGACACAGGCCTTCACCCTATGTCTGGGACTAGGATaGTGTTGGAGGCCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IQRLETSARGQRTQAFTLCLGLG*CWRPGW Trigger: CCAGCCTGGCCTCCAACACAATCCTAGTCCCAGACA...TAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | GATCCCTCTCGGCTCACCAATAAAGCGAGTGGCCAGTaGGATCTGAAAATAAAGACTGGGATGCCAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DPSRLTNKASGQ*DLKIKTGMPGL Trigger: GAGGCCTGGCATCCCAGTCTTTATTTTCAGATCTCACTGGCCACTCGCTTTATTGGTGAGCCGAGAGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | GCAATTTTCAAGACAGGTGGTGGTGGTACACCCCTGTaGTACAGATACTGGCACTCCAGAAGTGGAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: AIFKTGGGGTPL*YRYWHSRSGGR Trigger: CCTGCCTCCACTTCTGGAGTGCCAGTATCTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | TACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTaGTCATATTCTAATGGTGAGACAGGTGATGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YFLPIEPPPSPG*SYSNGETGDVQ Trigger: CTGCACATCACCTGTCTCACCATTAGAATATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | CAGGCCAATTACAACCACCATAGAATCCAATGCCCCTaGCCTGCTCAGGCACTACAAGCACAGGTATACCAG | + |
|
Preference number: 3 (lower is better) Translates to: QANYNHHRIQCP*PAQALQAQVYQ Trigger: CTGGTATACCTGTGCTTGTAGTGCCTGAGCAGGCCAGGGGCATTGGATTCTATGGTGGTTGTAATTGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | TCTCCACAGGATTTAGCAAAGTCCTTCAAGGGAAGATaGAGTAAGAGTACCCAGGAGTGTCCTTGGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: SPQDLAKSFKGR*SKSTQECPWPP Trigger: GGGTGGCCAAGGACACTCCTGGGTACTCTTACTGCATCTTCCCTTGAAGGACTTTGCTAAATCCTGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | GCAAAACAGGCCAATTACAACCACCATAGAATCCAATaGCCCTGGCCTGCTCAGGCACTACAAGCACAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: AKQANYNHHRIQ*PWPAQALQAQV Trigger: TACCTGTGCTTGTAGTGCCTGAGCAGGCCAGGGGCATTGGATTCTATGGTGGTTGTAATTGGCCTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | GGTCTGCTTGGAGACTGCTTGCCTCCACTTCCCCAGTaGAGAGATTGCACTGTTTTTACACTATCACGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GLLGDCLPPLPQ*RDCTVFTLSRG Trigger: ACCACGTGATAGTGTAAAAACAGTGCAATCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | GAAGCAGGATCTTTCTTGGTCTGCTTGGAGACTGCTTaGCTCCACTTCCCCAGTGCAGAGATTGCACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: EAGSFLVCLETA*LHFPSAEIALF Trigger: AAACAGTGCAATCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGATCCTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | GACGGCCTTCCAACAGGCCAGGGAAAAGGTCAAGGTTaGCCAGTTATTTCTCAGAAGCCACAGCATGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: DGLPTGQGKGQG*PVISQKPQHAI Trigger: AATTGCATGCTGTGGCTTCTGAGAAATAACTGGCCAACCTTGACCTTTTCCCTGGCCTGTTGGAAGGCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | TTTTACACTATCACGTGGTTGCTACAGATGCAGCTCTaGTCCTCACACTTTCACAGCAGGGGCTTCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FYTITWLLQMQL*SSHFHSRGFSL Trigger: GAGGCTGAAGCCCCTGCTGTGAAAGTGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCCAACTCCAGCATCCACACTGTGAACAGACTTGGGATGGAGAAGAGTGGAAGAGCTCTCTGTGGCTaGGTTAACTATCAGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LPNSSIHTVNRLGMEKSGRALCG*VNYQFT Trigger: TGTGAACTGATAGTTAACCAAGCCACAGAGAGCTCT...TCCACTCTTCTCCATCCCAAGTCTGTTCACAGTGTGGATGCTGGAGTTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTCGTGATGGACTACGAGGCCTTGTGTGTGCTTGGCCAGAGCTGTGTCACTCCTCTCTTTATGTATaGAAGCAGGATCTTTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HGRDGLRGLVCAWPELCHSSLYV*KQDLSW Trigger: CCAAGAAAGATCCTGCTTCAATACATAAAGAGAGGA...GTGACACAGCTCTGGCCAAGCACACACAAGGCCTCGTAGTCCATCACGACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | GGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAGATTaGACTGTTTTTACACTATCACGTGGTTGCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GDCLPPLPQCRD*TVFTLSRGCYR Trigger: TCTGTAGCAACCACGTGATAGTGTAAAAACAGTGCAATCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | AGTTGCCTGTTGCAGTATCCAAAGGTTAGAGACATCTaGAAGAGGACAGAGGACACAGGCCTTCACCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SCLLQYPKVRDI*KRTEDTGLHPT Trigger: AGTAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGATACTGCAACAGGCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | GTTTATAGGCATGATCCAAGTGCTGATTGGTACCTGTaGAGCCCAGAAGAAGGTAGTGGCTTTCCTGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: VYRHDPSADWYL*SPEEGSGFPGT Trigger: AGTCCCAGGAAAGCCACTACCTTCTTCTGGGCTCCACAGGTACCAATCAGCACTTGGATCATGCCTATAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | CATGTGTCACAATACACACTGAAGTCAGAGAACCTGTaGAGGTCGGTTCTCTTCTTCCACCCTGAGGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HVSQYTLKSENL*RSVLFFHPEAH Trigger: ATGAGCCTCAGGGTGGAAGAAGAGAACCGACCTCCACAGGTTCTCTGACTTCAGTGTGTATTGTGACACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | TTGCCAGAGTGGGTAGCACATACATGTTTGGTGTTGTaGCGGTCAGAAGTTGCCAGATTCTCTGGAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPEWVAHTCLVL*RSEVARFSGTG Trigger: TCCAGTTCCAGAGAATCTGGCAACTTCTGACCGCCACAACACCAAACATGTATGTGCTACCCACTCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | CTTTATGTATTGAAGCAGGATCTTTCTTGGTCTGCTTaGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LYVLKQDLSWSA*RLLASTSPVQR Trigger: TCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGATCCTGCTTCAATACATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | GTGCGTGTTTTAATTTGTGGGCTTGACGCTAGTGCATaGACTCTGTCAGTTGCCTGTTGCAGTATCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VRVLICGLDASA*TLSVACCSIQR Trigger: CCTTTGGATACTGCAACAGGCAACTGACAGAGTCCATGCACTAGCGTCAAGCCCACAAATTAAAACACGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAAAGGTTAGAGACATCTGCAAGAGGACAGAGGACACAGGCCTTCACCCTAGGGAAAAGGTCAAGGTaGGCCAGTTATTTCTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IQRLETSARGQRTQAFTLGKRSR*ASYFSE Trigger: TTCTGAGAAATAACTGGCCAACCTTGACCTTTTCCC...TAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCACAGATGCAAGTGCTTGTGTAGAGAGGTTGACTTCAGGTATCCCGCTCTATTGGTGGCCCCTGAGTTaGGGAAATAGTAACCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FTDASACVERLTSGIPLYWWPLS*GNSNPV Trigger: TACAGGGTTACTATTTCCCAAACTCAGGGGCCACCA...ATAGAGCGGGATACCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | AGTACCCAGGAGTGTCCTTGGCCACCCATGGCTATGTaGACTATGTCATTCATGGCAATTTTCAAGACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: STQECPWPPMAM*TMSFMAIFKTG Trigger: ACCTGTCTTGAAAATTGCCATGAATGACATAGTTCACATAGCCATGGGTGGCCAAGGACACTCCTGGGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | ACTGAGCCAGGTGATCTAGACTCAGATCATTCTGCTTaGACAACAGTACTTTTTACCCATCGAGCCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: TEPGDLDSDHSA*TTVLFTHRATT Trigger: GGTGGTGGCTCGATGGGTAAAAAGTACTGTTGTTCAAGCAGAATGATCTGAGTCTAGATCACCTGGCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | CTGTGTATGCACAGGAACATGTGTCACAATACACACTaGAGTCAGAGAACCTGTGGAGGTCGGTTCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LCMHRNMCHNTH*SQRTCGGRFSS Trigger: AGAAGAGAACCGACCTCCACAGGTTCTCTGACTTCAGTGTGTATTGTGACACATGTTCCTGTGCATACACAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | GAAGAAGGTAGTGGCTTTCCTGGGACTGGAGTAACTTaGAGTTGTGAGCTATCATATGGGTACCAGGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: EEGSGFPGTGVT*SCELSYGYQES Trigger: TGATTCCTGGTACCCATATGATAGCTCACAACTGCAAGTTACTCCAGTCCCAGGAAAGCCACTACCTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | TATGTCATTCATGGCAATTTTCAAGACAGGTGGTGGTaGTACACCCCTGTGATACAGATACTGGCACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: YVIHGNFQDRWW*YTPVIQILALQ Trigger: CTGGAGTGCCAGTATCTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGCCATGAATGACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | GCAGTAAGAGTACCCAGGAGTGTCCTTGGCCACCCATaGCTATGTGAACTATGTCATTCATGGCAATTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: AVRVPRSVLGHP*LCELCHSWQFS Trigger: TGAAAATTGCCATGAATGACATAGTTCACATAGCCATGGGTGGCCAAGGACACTCCTGGGTACTCTTACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | CCAGTGCAGAGATTGCACTGTTTTTACACTATCACGTaGTTGCTACAGATGCAGCTCTGGTCCTCACACTTT | + |
|
Preference number: 3 (lower is better) Translates to: PVQRLHCFYTIT*LLQMQLWSSHF Trigger: AAAGTGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAAACAGTGCAATCTCTGCACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCACAGATGCAAGTGCTTGTGTAGAGAGGTTGACTTCAGGTATCCCGCTCTATCAGCAGCAAGAGAAATaGAACTGTTTATTGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FTDASACVERLTSGIPLYQQQEK*NCLLAQ Trigger: CTGGGCCAATAAACAGTTCAATTTCTCTTGCTGCTG...ATAGAGCGGGATACCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | ACACACACACACATAACCACCAGCAGCAAGAGAAATTaGACTGTTTATTGGCCCAGATCTGGGTTTCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: THTHITTSSKRN*TVYWPRSGFPA Trigger: TGCTGGAAACCCAGATCTGGGCCAATAAACAGTTCAATTTCTCTTGCTGCTGGTGGTTATGTGTGTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | TGCAGAGATTGCACTGTTTTTACACTATCACGTGGTTaGTACAGATGCAGCTCTGGTCCTCACACTTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: CRDCTVFTLSRG*YRCSSGPHTFT Trigger: TGTGAAAGTGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAAACAGTGCAATCTCTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR GCA 72 bp | AAAATCAGAGACAACATAGGGGTTAAGAGAGCTTACTaGTGTTACAGAGGACATGGGTTCGGTTCCCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: KIRDNIGVKRAY*CYRGHGFGSQH Trigger: GTGTTGGGAACCGAACCCATGTCCTCTGTAACAGCAGTAAGCTCTCTTAACCCCTATGTTGTCTCTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | AACTATGTCATTCATGGCAATTTTCAAGACAGGTGGTaGTGGTACACCCCTGTGATACAGATACTGGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: NYVIHGNFQDRW*WYTPVIQILAL Trigger: GAGTGCCAGTATCTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGCCATGAATGACATAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | GTGAACTATGTCATTCATGGCAATTTTCAAGACAGGTaGTGGTGGTACACCCCTGTGATACAGATACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VNYVIHGNFQDR*WWYTPVIQILA Trigger: TGCCAGTATCTGTATCACAGGGGTGTACCACCACCACCTGTCTTGAAAATTGCCATGAATGACATAGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGGAGGGGGCACTAACCAGAGCCTAAATAGAGAAAACATGAGGGTATTTAAATTGAACTGTTTATaGGCCCAGATCTGGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LRGGGTNQSLNRENMRVFKLNCL*AQIWVS Trigger: GGAAACCCAGATCTGGGCCAATAAACAGTTCAATTT...AAATACCCTCATGTTTTCTCTATTTAGGCTCTGGTTAGTGCCCCCTCCTCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR TCA 72 bp | TGGAAAGACCCTGTGTGTGTGTGTGTCTACAATAGCTaGATTCACAGATGCAAGTGCTTGTGTAGAGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WKDPVCVCVYNS*IHRCKCLCREV Trigger: AACCTCTCTACACAAGCACTTGCATCTGTGAATTCAGCTATTGTAGACACACACACACACAGGGTCTTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CCA 72 bp | CTTTATTATTTTATGTGTACAAGAGCTTTGCCAGAGTaGGTAGCACATACATGTTTGGTGTTGTGGCGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LYYFMCTRALPE*VAHTCLVLWRS Trigger: TGACCGCCACAACACCAAACATGTATGTGCTACCCACTCTGGCAAAGCTCTTGTACACATAAAATAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR GCA 90 bp | TCGGTTCCCAACACCCACATCAGGCAGTTCACAACAACCACCTACCACTCCCGCCCTCTCCGCCAGCACTaGAGGGGCCGCAGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPNTHIRQFTTTTYHSRPLRQH*RGRSTS Trigger: GGAGGTGCTGCGGCCCCTGCAGTGCTGGCGGAGAGG...GCGGGAGTGGTAGGTGGTTGTTGTGAACTGCCTGATGTGGGTGTTGGGAACCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR GCA 90 bp | AGGCTCTTAGAGACCCTTCCCTCTGGGCAGCATCGAGGCAGGGCTGCTCAGCTGCAGGGTTCCCACCTCTaGGTCCCGTCACTCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLLETLPSGQHRGRAAQLQGSHL*VPSLPS Trigger: GGAAGGGAGTGACGGGACGCAGAGGTGGGAACCCTG...CAGCTGAGCAGCCCTGCCTCGATGCTGCCCAGAGGGAAGGGTCTCTAAGAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTTGGTCTGCTTGGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAGATTAGGCCGAGGCCACCTTaGGGGAGGTGGTCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLVCLETACLHFPSAEIRPRPP*GRWSPA Trigger: TGCAGGAGACCACCTCCCGCAAGGTGGCCTCGGCCT...AATCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR CCA 90 bp | AACCACCATAGAATCCAATGCCCCTGGCCTGCTCAGGCACTACAAGCACAGGTAAGAGAGGCAGCACGGTaGAGCAGGCCTCCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHHRIQCPWPAQALQAQVREAAR*SRPPAG Trigger: ACCAGCTGGAGGCCTGCTCCACCGTGCTGCCTCTCT...TACCTGTGCTTGTAGTGCCTGAGCAGGCCAGGGGCATTGGATTCTATGGTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR TCA 90 bp | CCAATGCCCCTGGCCTGCTCAGGCACTACAAGCACAGGTATACCAGAATATCATGCCAAGAGGCCCCGATaGGCATCAGCATTCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMPLACSGTTSTGIPEYHAKRPR*ASAFGS Trigger: GCTGCCGAATGCTGATGCTCATCGGGGCCTCTTGGC...ATGATATTCTGGTATACCTGTGCTTGTAGTGCCTGAGCAGGCCAGGGGCATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR GCA 90 bp | ATCCAAAGGTTAGAGACATCTGCAAGAGGACAGAGGACACAGGCCTTCACCCTACACGAAGGCCACGCCTaGCAGCAGGTCAGAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQRLETSARGQRTQAFTLHEGHA*QQVRGC Trigger: GCAGCCTCTGACCTGCTGGCAGGCGTGGCCTTCGTG...TAGGGTGAAGGCCTGTGTCCTCTGTCCTCTTGCAGATGTCTCTAACCTTTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR CCA 90 bp | ACCCTTTGTATCAAGTGGCAAATGTCTAGCCCTAAGCTCCAGCCTGCGGTCACCCTGAGAGTAAGGTGTTaGCCACGAAGGCCACGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLCIKWQMSSPKLQPAVTLRVRC*PRRPRL Trigger: CAGGCGTGGCCTTCGTGGCCAACACCTTACTCTCAG...GGTGACCGCAGGCTGGAGCTTAGGGCTAGACATTTGCCACTTGATACAAAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR CCA 90 bp | TGCAGCACTGAGGGACATCATGAGGTCACCTGGTCTCTCCCCACAGAGCTCTCTAGGTACATTGCTGAGTaGAACTTGCTGTTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSTEGHHEVTWSLPTELSRYIAE*NLLFLA Trigger: GGCCAGGAACAGCAAGTTCCACTCAGCAATGTACCT...AGAGAGCTCTGTGGGGAGAGACCAGGTGACCTCATGATGTCCCTCAGTGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| 3UTR CAA 72 bp | TCAGAGATGAGAGGTGTGGACCAACATGGCCCTTTTTaGCCGTGCTGGGACAGGGTGCAGGACTTTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEMRGVDQHGPF*PCWDRVQDFRC Trigger: ACACCTAAAGTCCTGCACCCTGTCCCAGCACGGCAAAAAAGGGCCATGTTGGTCCACACCTCTCATCTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR TCA 90 bp | TGCTCATATTCTAATGGTGAGACAGGTGATGTGCAGAGGAGCCGCGATGAAGATCACTGCCGTAGAGCTTaGCCTTGGCGAGGGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: CSYSNGETGDVQRSRDEDHCRRA*PWRGPL Trigger: AAGTGGCCCTCGCCAAGGTCAAGCTCTACGGCAGTG...ATCTTCATCGCGGCTCCTCTGCACATCACCTGTCTCACCATTAGAATATGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR GCA 90 bp | TGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCTGCTTCTTGCTGAGTGGAACTTaGTGTTCCTGGCCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRPGWPQTQKSTCLCLCFLLSGT*CSWPLQ Trigger: TTGCAGTGGCCAGGAACAGCAAGTTCCACTCAGCAA...GAAGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR TCA 90 bp | AACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATATTCTAGACAGGATTGAGCAGTaGGTTAAGGGTGGCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSTFYPSSHHPAPAAHILDRIEQ*VKGGKG Trigger: GCCTTTGCCACCCTTAACTCACTGCTCAATCCTGTC...TAGAATATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR GCA 90 bp | CCAATGCCCCTGGCCTGCTCAGGCACTACAAGCACAGGTATACCAGAATATCATCAGAGGCTGCCAGGTTaGCAAGGAACAGGTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PMPLACSGTTSTGIPEYHQRLPG*QGTGTL Trigger: CAATGTACCTGTTCCTTGGCAACCTGGCAGCCTCTG...ATGATATTCTGGTATACCTGTGCTTGTAGTGCCTGAGCAGGCCAGGGGCATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
||
| CDS-3UTR GCA 90 bp | AGAATGCTGACACCCTTTGTATCAAGTGGCAAATGTCTAGCCCTAAGCTCCAGCCAGCAGGTCAGAGGCTaGCAGGTTGCCAAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RMLTPFVSSGKCLALSSSQQVRG*QVAKEQ Trigger: CTGTTCCTTGGCAACCTGGCAGCCTCTGACCTGCTG...GCTGGAGCTTAGGGCTAGACATTTGCCACTTGATACAAAGGGTGTCAGCATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 72 bp | AGACGGCCTTCCAACAGGCCAGGGAAAAGGTCAAGGTaGGCCAGTTATTTCTCAGAAGCCACAGCATGCAAT | + |
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Preference number: 4 (lower is better) Translates to: RRPSNRPGKRSR*ASYFSEATACN Trigger: ATTGCATGCTGTGGCTTCTGAGAAATAACTGGCCAACCTTGACCTTTTCCCTGGCCTGTTGGAAGGCCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR GCA 90 bp | CCAATGCCCCTGGCCTGCTCAGGCACTACAAGCACAGGTATACCAGAATATCATAAGGACAGAGTGACATaGCCTGAGAGTAAGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PMPLACSGTTSTGIPEYHKDRVT*PESKVL Trigger: CAACACCTTACTCTCAGGGCATGTCACTCTGTCCTT...ATGATATTCTGGTATACCTGTGCTTGTAGTGCCTGAGCAGGCCAGGGGCATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 72 bp | TGGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAGATaGCACTGTTTTTACACTATCACGTGGTTGCTACAG | + |
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Preference number: 4 (lower is better) Translates to: WRLLASTSPVQR*HCFYTITWLLQ Trigger: CTGTAGCAACCACGTGATAGTGTAAAAACAGTGCAATCTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 72 bp | GCTTTGCCAGAGTGGGTAGCACATACATGTTTGGTGTaGTGGCGGTCAGAAGTTGCCAGATTCTCTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: ALPEWVAHTCLV*WRSEVARFSGT Trigger: AGTTCCAGAGAATCTGGCAACTTCTGACCGCCACAACACCAAACATGTATGTGCTACCCACTCTGGCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR TCA 90 bp | ACTGTTTTTACACTATCACGTGGTTGCTACAGATGCAGCTCTGGTCCTCACACTTCCTGGCCACTGCAATaGGCACCAGAAGATTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TVFTLSRGCYRCSSGPHTSWPLQ*APEDSP Trigger: TGGAGAATCTTCTGGTGCTCATTGCAGTGGCCAGGA...AGTGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAAACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR GCA 90 bp | ACTGTTTTTACACTATCACGTGGTTGCTACAGATGCAGCTCTGGTCCTCACACTGGTGATGTAGGCATATaGATGCCTCTCTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TVFTLSRGCYRCSSGPHTGDVGI*MPLSRE Trigger: CTCCCTGGAGAGAGGCATGCATATGCCTACATCACC...AGTGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAAACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 72 bp | TCTTTATGTATTGAAGCAGGATCTTTCTTGGTCTGCTaGGAGACTGCTTGCCTCCACTTCCCCAGTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLCIEAGSFLVC*ETACLHFPSAE Trigger: CTCTGCACTGGGGAAGTGGAGGCAAGCAGTCTCCAAGCAGACCAAGAAAGATCCTGCTTCAATACATAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR TCA 90 bp | AGAATGCTGACACCCTTTGTATCAAGTGGCAAATGTCTAGCCCTAAGCTCCAGCGAACCTTCTCAGGATTaGGGTACTCTGAGTATAAGC | + |
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Preference number: 4 (lower is better) Translates to: RMLTPFVSSGKCLALSSSEPSQD*GTLSIS Trigger: GCTTATACTCAGAGTACCTCAATCCTGAGAAGGTTC...GCTGGAGCTTAGGGCTAGACATTTGCCACTTGATACAAAGGGTGTCAGCATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 72 bp | CATAACCACCAGCAGCAAGAGAAATTGAACTGTTTATaGGCCCAGATCTGGGTTTCCAGCACAAGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: HNHQQQEKLNCL*AQIWVSSTRRT Trigger: TGTCCTCCTTGTGCTGGAAACCCAGATCTGGGCCAATAAACAGTTCAATTTCTCTTGCTGCTGGTGGTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 72 bp | CACACACACACACATAACCACCAGCAGCAAGAGAAATaGAACTGTTTATTGGCCCAGATCTGGGTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTHTHNHQQQEK*NCLLAQIWVSS Trigger: GCTGGAAACCCAGATCTGGGCCAATAAACAGTTCAATTTCTCTTGCTGCTGGTGGTTATGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 72 bp | GTGCAGAGATTGCACTGTTTTTACACTATCACGTGGTaGCTACAGATGCAGCTCTGGTCCTCACACTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VQRLHCFYTITW*LQMQLWSSHFH Trigger: GTGAAAGTGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAAACAGTGCAATCTCTGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| 3UTR CAA 72 bp | GCTGAATTCACAGATGCAAGTGCTTGTGTAGAGAGGTaGACTTCAGGTATCCCGCTCTATCCCTCTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: AEFTDASACVER*TSGIPLYPSLC Trigger: ACAAAGAGAGGGATAGAGCGGGATACCTGAAGTCAACCTCTCTACACAAGCACTTGCATCTGTGAATTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR CCA 90 bp | ACCCATGGCTATGTGAACTATGTCATTCATGGCAATTTTCAAGACAGGTGGTGGTGTCCAGCGTCTCCTTaGTGTAATTGTAGTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: THGYVNYVIHGNFQDRWWCPASP*CNCSVP Trigger: TGGAACACTACAATTACACCAAGGAGACGCTGGACA...CCACCACCTGTCTTGAAAATTGCCATGAATGACATAGTTCACATAGCCATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS GCA 90 bp | CCCTCTCGGGCAAACCACTGCACGGGAGTTAAGGACAGAGTGACATaGCCTGAGAGTAAGGTGTTGGCCACGAAGGCCACGCCTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSRANHCTGVKDRVT*PESKVLATKATPAS Trigger: GCTGGCAGGCGTGGCCTTCGTGGCCAACACCTTACTCTCAGGGCATGTCACTCTGTCCTTAACTCCCGTGCAGTGGTTTGCCCGAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS TCA 90 bp | CGGAACCCTCTCGGGCAAACCACTGCACGGGAGTTAAGGACAGAGTaGCATGCCCTGAGAGTAAGGTGTTGGCCACGAAGGCCACGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RNPLGQTTARELRTE*HALRVRCWPRRPRL Trigger: CAGGCGTGGCCTTCGTGGCCAACACCTTACTCTCAGGGCATGTCACTCTGTCCTTAACTCCCGTGCAGTGGTTTGCCCGAGAGGGTTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR CAA 90 bp | TTGAACAACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATAAGGCCGAGGCCACCTaGCGGGAGGTGGTCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LNNSTFYPSSHHPAPAAHKAEAT*REVVSC Trigger: GCAGGAGACCACCTCCCGCAAGGTGGCCTCGGCCTT...ATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTTGTTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS GCA 90 bp | GAGGCGGAGAGCGTGATGAAGGCGGAACCCTCTCGGGCAAACCACTaGACGGGAGTTAAGGACAGAGTGACATGCCCTGAGAGTAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: EAESVMKAEPSRANH*TGVKDRVTCPESKV Trigger: CACCTTACTCTCAGGGCATGTCACTCTGTCCTTAACTCCCGTGCAGTGGTTTGCCCGAGAGGGTTCCGCCTTCATCACGCTCTCCGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR CAA 90 bp | TGCAGCACTGAGGGACATCATGAGGTCACCTGGTCTCTCCCCACAGAGCTCTCTCAAGGAACAGGTACATaGCTGAGTGGAACTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: CSTEGHHEVTWSLPTELSQGTGT*LSGTCC Trigger: ACAGCAAGTTCCACTCAGCAATGTACCTGTTCCTTG...AGAGAGCTCTGTGGGGAGAGACCAGGTGACCTCATGATGTCCCTCAGTGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR CAA 90 bp | GCACTGTTTTTACACTATCACGTGGTTGCTACAGATGCAGCTCTGGTCCTCACACCTGAGAGTAAGGTGTaGGCCACGAAGGCCACGCCT | + |
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Preference number: 5 (lower is better) Translates to: ALFLHYHVVATDAALVLTPESKV*ATKATP Trigger: AGGCGTGGCCTTCGTGGCCAACACCTTACTCTCAGG...TGTGAGGACCAGAGCTGCATCTGTAGCAACCACGTGATAGTGTAAAAACAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR CAA 90 bp | AGAATGCTGACACCCTTTGTATCAAGTGGCAAATGTCTAGCCCTAAGCTCCAGCTCAGAGGCTGCCAGGTaGCCAAGGAACAGGTACATT | + |
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Preference number: 5 (lower is better) Translates to: RMLTPFVSSGKCLALSSSSEAAR*PRNRYI Trigger: AATGTACCTGTTCCTTGGCAACCTGGCAGCCTCTGA...GCTGGAGCTTAGGGCTAGACATTTGCCACTTGATACAAAGGGTGTCAGCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS-3UTR CAA 90 bp | AACAGTACTTTTTACCCATCGAGCCACCACCCAGCCCCGGCTGCTCATATTCTAAGAACCTTCTCAGGATaGAGGTACTCTGAGTATAAG | + |
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Preference number: 5 (lower is better) Translates to: NSTFYPSSHHPAPAAHILRTFSG*RYSEYK Trigger: CTTATACTCAGAGTACCTCAATCCTGAGAAGGTTCT...TAGAATATGAGCAGCCGGGGCTGGGTGGTGGCTCGATGGGTAAAAAGTACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS CAA 72 bp | GCGCAGCACAAGATGATGATGAAGGCCGAGGCCACCTaGCGGGAGGTGGTCTCCTGCATGTCCAGCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: AQHKMMMKAEAT*REVVSCMSSVS Trigger: GGAGACGCTGGACATGCAGGAGACCACCTCCCGCAAGGTGGCCTCGGCCTTCATCATCATCTTGTGCTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS TCA 72 bp | AGTACGATGGTGACCGTCTTGAGCAGGGCTAGCGTCTaGGGACCAGCAACATCCGCGTGGCTGGAGCGGACT | + |
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Preference number: 6 (lower is better) Translates to: STMVTVLSRASV*GPATSAWLERT Trigger: AGTCCGCTCCAGCCACGCGGATGTTGCTGGTCCTCAGACGCTAGCCCTGCTCAAGACGGTCACCATCGTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS GCA 72 bp | AGCGTGATGAAGGCGGAACCCTCTCGGGCAAACCACTaGACGGGAGTTAAGGACAGAGTGACATGCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SVMKAEPSRANH*TGVKDRVTCPE Trigger: CTCAGGGCATGTCACTCTGTCCTTAACTCCCGTGCAGTGGTTTGCCCGAGAGGGTTCCGCCTTCATCACGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS TCA 72 bp | CTCGGGCAAACCACTGCACGGGAGTTAAGGACAGAGTaGCATGCCCTGAGAGTAAGGTGTTGGCCACGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LGQTTARELRTE*HALRVRCWPRR Trigger: CCTTCGTGGCCAACACCTTACTCTCAGGGCATGTCACTCTGTCCTTAACTCCCGTGCAGTGGTTTGCCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS GCA 72 bp | GCAAACCACTGCACGGGAGTTAAGGACAGAGTGACATaGCCTGAGAGTAAGGTGTTGGCCACGAAGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: ANHCTGVKDRVT*PESKVLATKAT Trigger: CGTGGCCTTCGTGGCCAACACCTTACTCTCAGGGCATGTCACTCTGTCCTTAACTCCCGTGCAGTGGTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS TCA 72 bp | CACCCAGAATCAGCGATATCAGCCAAGAGGCCCCGATaGGCATCAGCATTCGGCAGCTTTTGTCACTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: HPESAISAKRPR*ASAFGSFCHCR Trigger: ACGGCAGTGACAAAAGCTGCCGAATGCTGATGCTCATCGGGGCCTCTTGGCTGATATCGCTGATTCTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS GCA 72 bp | GTGTTACCCTCCAGAAATGTCGGTGATGTAGGCATATaGATGCCTCTCTCCAGGGAGCTGGAGCTGCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: VLPSRNVGDVGI*MPLSRELELRR Trigger: TCTCCGCAGCTCCAGCTCCCTGGAGAGAGGCATGCATATGCCTACATCACCGACATTTCTGGAGGGTAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS CAA 72 bp | GGTCAGAGGCTGCCAGGTTGCCAAGGAACAGGTACATaGCTGAGTGGAACTTGCTGTTCCTGGCCACTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GQRLPGCQGTGT*LSGTCCSWPLQ Trigger: TTGCAGTGGCCAGGAACAGCAAGTTCCACTCAGCAATGTACCTGTTCCTTGGCAACCTGGCAGCCTCTGACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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| CDS CAA 90 bp | GAGGCTGCCAGGTTGCCAAGGAACAGGTACATTGCTGAGTGGAACTaGCTGTTCCTGGCCACTGCAATGAGCACCAGAAGATTCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: EAARLPRNRYIAEWN*LFLATAMSTRRFST Trigger: GGTGGAGAATCTTCTGGTGCTCATTGCAGTGGCCAGGAACAGCAAGTTCCACTCAGCAATGTACCTGTTCCTTGGCAACCTGGCAGCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054197.7 |
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