Pregenerated sensors for S100PBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040928Ensembl transcript IDs: ENSMUST00000049081.12, ENSMUST00000072431.13, ENSMUST00000106059.8, ENSMUST00000106061.9, ENSMUST00000117350.2, ENSMUST00000117497.8, ENSMUST00000117965.8
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTTTAATCCCAGCACTAAGAAGGCAGAGGCAGGTGAATCTCTGTaGGTCCTGAGGCCAGCCTGGTCTACCCAGACAGGAGGGCTACAT | + |
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Preference number: 1 (lower is better) Translates to: TFNPSTKKAEAGESL*VLRPAWSTQTGGLH Trigger: ATGTAGCCCTCCTGTCTGGGTAGACCAGGCTGGCCTCAGGACTCACAGAGATTCACCTGCCTCTGCCTTCTTAGTGCTGGGATTAAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR GCA 90 bp | CATGGTGGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATaGTCAAACACTAATGTGAAACAATGGACCCAATGCTACAACTAC | + |
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Preference number: 1 (lower is better) Translates to: HGGGAVHGLNRTFPR*SNTNVKQWTQCYNY Trigger: GTAGTTGTAGCATTGGGTCCATTGTTTCACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACCACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR CCA 90 bp | ATACCGGCTCTTAGCTTGCAAAACAGCCTCTTCCTTACAGTAGACTaGAAGGTGAGTCTGCCTGCCCTTACAGCTGGTATTTTACTCAAA | + |
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Preference number: 1 (lower is better) Translates to: IPALSLQNSLFLTVD*KVSLPALTAGILLK Trigger: TTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAGTCTACTGTAAGGAAGAGGCTGTTTTGCAAGCTAAGAGCCGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR TCA 90 bp | TATAAAATGAGACAGAGGCTAGGCAACTATGAATCACTCCCACAGTaGCTGCAGCAGCAGGAGTGTCATATTGTAAACCCTCTCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: YKMRQRLGNYESLPQ*LQQQECHIVNPLRM Trigger: CATTCTGAGAGGGTTTACAATATGACACTCCTGCTGCTGCAGTCACTGTGGGAGTGATTCATAGTTGCCTAGCCTCTGTCTCATTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR CCA 90 bp | AAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCGGCTTCTaGCCAGTACCATCTTTAAGGCTAACATGCCGGATGAGTTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: KHKRYAALKRLSPGF*PVPSLRLTCRMSFL Trigger: AAGAAAACTCATCCGGCATGTTAGCCTTAAAGATGGTACTGGCCAGAAGCCGGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR GCA 90 bp | ACTTTCCCAAGATGCTCAAACACTAATGTGAAACAATGGACCCAATaGTACAACTACAACGCTAACATCCAGGGTATAAGGGTACCTGTA | + |
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Preference number: 1 (lower is better) Translates to: TFPRCSNTNVKQWTQ*YNYNANIQGIRVPV Trigger: TACAGGTACCCTTATACCCTGGATGTTAGCGTTGTAGTTGTAGCATTGGGTCCATTGTTTCACATTAGTGTTTGAGCATCTTGGGAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR GCA 90 bp | CCACTGGTTCAAACTGAAGAAAACAGTATAATCTCCACTTCGGCTTaGAATAGCTTCTCTGAAGTACAGGAAGATACGTTTGAAGGATCT | + |
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Preference number: 1 (lower is better) Translates to: PLVQTEENSIISTSA*NSFSEVQEDTFEGS Trigger: AGATCCTTCAAACGTATCTTCCTGTACTTCAGAGAAGCTATTGCAAGCCGAAGTGGAGATTATACTGTTTTCTTCAGTTTGAACCAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| 3UTR CAA 90 bp | ATACATTCAGTCTTAATTCCTCCTGGTAGCAGGAGAGCAGGAGCTTaGCTGTCCCTCCACTCCCTGGGCTCCCCGTGGGAACCATTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: IHSVLIPPGSRRAGA*LSLHSLGSPWEPFS Trigger: GCTGAATGGTTCCCACGGGGAGCCCAGGGAGTGGAGGGACAGCAAAGCTCCTGCTCTCCTGCTACCAGGAGGAATTAAGACTGAATGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTGAATCACTCCCACAGTaGCTGCAGCAGCAGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: QPSLRASSRTARSIQRNPESLPQ*LQQQEC Trigger: ACACTCCTGCTGCTGCAGTCACTGTGGGAGTGATTC...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR CAA 90 bp | GATCTTTTAGGACATCCATTAAGACAGTACACAGAGCCTAGCGCTTaGGTTGGAACACCACACCTTACGCGGTGCATGGTGGTGGTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: DLLGHPLRQYTEPSA*VGTPHLTRCMVVVR Trigger: CCGCACCACCACCATGCACCGCGTAAGGTGTGGTGTTCCAACCAAAGCGCTAGGCTCTGTGTACTGTCTTAATGGATGTCCTAAAAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAGAATCACTCCCACAGTaGCTGCAGCAGCAGGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: KEYHVNQYRTALSSPSPPESLPQ*LQQQEC Trigger: ACACTCCTGCTGCTGCAGTCACTGTGGGAGTGATTC...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTAGTAGGCAGAGCTCTGTaGGTTAAGGCCAGCCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LSLICSDRGSTPIIHSVLVGRAL*VKASPV Trigger: GACTGGGCTGGCCTTAACTCACAGAGCTCTGCCTAC...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGTTCCTTACAGTAGACTaGAAGGTGAGTCTGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVFLTVD*KVSLPA Trigger: GGCAGGCAGACTCACCTTCCAGTCTACTGTAAGGAA...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTACAGACAGAGGGCACCTaGGAGCCATGTCTCAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LSLICSDRGSTPIIHSVLQTEGT*EPCLSL Trigger: TAGACTGAGACATGGCTCTCAGGTGCCCTCTGTCTG...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGCGACAGTCAGGATTCTaGCAGGATTTCTTCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVRQSGF*QDFFSR Trigger: TCTGCTGAAGAAATCCTGTCAGAATCCTGACTGTCG...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCACACTCCCACAGTGACTaGAGCAGCAGGAGTGTCATA | + |
|
Preference number: 2 (lower is better) Translates to: KEYHVNQYRTALSSPSPPHSHSD*SSRSVI Trigger: TATGACACTCCTGCTGCTGCAGTCACTGTGGGAGTG...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCACACCTTTAATCCCAGCACTAAGAAGGCAGAGGCAGGTGAATCTCTGTGGACTAACCGGTCACTaGGAGTGGGAAAAGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: WCTPLIPALRRQRQVNLCGLTGH*EWEKEK Trigger: CTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCC...ACAGAGATTCACCTGCCTCTGCCTTCTTAGTGCTGGGATTAAAGGTGTGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCAGGACTAACCGGTCACTaGGAGTGGGAAAAGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YKGTCNQRERPVTLPRISGLTGH*EWEKEK Trigger: CTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCC...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCCAGACAGAGGGCACCTaGGAGCCATGTCTCAGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LEAKPKHKRYAALKRLSPQTEGT*EPCLSL Trigger: TAGACTGAGACATGGCTCTCAGGTGCCCTCTGTCTG...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATTTCCGAAGACAGAACTaGAGATTCCTAGACATCCCA | + |
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Preference number: 2 (lower is better) Translates to: GGAVHGLNRTFPRCSNTNFRRQN*RFLDIP Trigger: TGGGATGTCTAGGAATCTTCAGTTCTGTCTTCGGAA...ATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTAGGACGAAGGTTCCTTaGACAGCAGCAACACATAAA | + |
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Preference number: 2 (lower is better) Translates to: QPSLRASSRTARSIQRNPRTKVP*TAATHK Trigger: TTTATGTGTTGCTGCTGTTCAAGGAACCTTCGTCCT...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTAAACGGGAGAGGCCAGTaGCTCTCCCAAGGATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LSLICSDRGSTPIIHSVLNGRGQ*LSQGFH Trigger: ATGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTT...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCGAATCACTCCCACAGTaGCTGCAGCAGCAGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LEAKPKHKRYAALKRLSPESLPQ*LQQQEC Trigger: ACACTCCTGCTGCTGCAGTCACTGTGGGAGTGATTC...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAGAGGCTAGGCAACTATaGATCACTCCCACAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: KEYHVNQYRTALSSPSPPEARQL*ITPTVT Trigger: AGTCACTGTGGGAGTGATTCATAGTTGCCTAGCCTC...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCATGGTGGTGGTGCGGTaGACGGGCTCAATCGTACTT | + |
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Preference number: 2 (lower is better) Translates to: LEAKPKHKRYAALKRLSPMVVVR*TGSIVL Trigger: AAGTACGATTGAGCCCGTGCACCGCACCACCACCAT...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCACATACAAATCAGGGGTaGGGGGTGGCCCTCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: KEYHVNQYRTALSSPSPPHTNQG*GVALIK Trigger: TTTAATGAGGGCCACCCCCCACCCCTGATTTGTATG...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTGCTCAAACACTAATGTaGAACAATGGACCCAATGCT | + |
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Preference number: 2 (lower is better) Translates to: QPSLRASSRTARSIQRNPAQTLM*NNGPNA Trigger: AGCATTGGGTCCATTGTTTCACATTAGTGTTTGAGC...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAGAAGGTGAGTCTGCCTaGCCTTACAGCTGGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: KEYHVNQYRTALSSPSPPEGESA*PYSWYF Trigger: AAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTC...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR GCA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCATACCGGCTCTTAGCTTaGAAAACAGCCTCTTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: YKGTCNQRERPVTLPRISYRLLA*KTASSL Trigger: TAAGGAAGAGGCTGTTTTGCAAGCTAAGAGCCGGTA...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGTTCTGACTTAATGCAGGCCCATACAAATCAGGGGTaGGGGGTGGCCCTCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: PLQLVFYSKPDCSDLMQAHTNQG*GVALIK Trigger: TTTAATGAGGGCCACCCCCCACCCCTGATTTGTATG...GGCCTGCATTAAGTCAGAACAGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCCATACAAATCAGGGGTaGGGGGTGGCCCTCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: LEQQQHINSGSEDRTEDSHTNQG*GVALIK Trigger: TTTAATGAGGGCCACCCCCCACCCCTGATTTGTATG...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAACATACAAATCAGGGGTaGGGGGTGGCCCTCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: YCKASGLTGHWEWEKEKKHTNQG*GVALIK Trigger: TTTAATGAGGGCCACCCCCCACCCCTGATTTGTATG...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCGGACTAACCGGTCACTaGGAGTGGGAAAAGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LEQQQHINSGSEDRTEDSGLTGH*EWEKEK Trigger: CTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCC...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGAGGCTTCAGTGCAGAACAACTTCCCCACACCCTTCCTTAGAACAGCCAAAGACCGGAAACAGTaGTTAGTAAGGAACTTCACT | + |
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Preference number: 2 (lower is better) Translates to: RKEASVQNNFPTPFLRTAKDRKQ*LVRNFT Trigger: AGTGAAGTTCCTTACTAATCACTGTTTCCGGTCTTT...GGCTGTTCTAAGGAAGGGTGTGGGGAAGTTGTTCTGCACTGAAGCCTCCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| 3UTR-3UTR GCA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAAGAAGGTGAGTCTGCCTaGCCTTACAGCTGGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: YCKASGLTGHWEWEKEKKEGESA*PYSWYF Trigger: AAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTC...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCGAAGGTGAGTCTGCCTaGCCTTACAGCTGGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: LEAKPKHKRYAALKRLSPEGESA*PYSWYF Trigger: AAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTC...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCTACCGGCTCTTAGCTTaGAAAACAGCCTCTTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: LEQQQHINSGSEDRTEDSYRLLA*KTASSL Trigger: TAAGGAAGAGGCTGTTTTGCAAGCTAAGAGCCGGTA...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAATCTGCACTTTGTTTTaGTCCCATAGGTGGGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: KEYHVNQYRTALSSPSPPICTLF*SHRWVV Trigger: AACAACCCACCTATGGGACCAAAACAAAGTGCAGAT...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGAGGCTTCAGTGCAGAACAACTTCCCCACACCCTTCCTTAGAACAGCCACAGCATGCCCTCTATaGGAAGAAAATCTTTTATCA | + |
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Preference number: 2 (lower is better) Translates to: RKEASVQNNFPTPFLRTATACPL*EENLLS Trigger: TGATAAAAGATTTTCTTCCCATAGAGGGCATGCTGT...GGCTGTTCTAAGGAAGGGTGTGGGGAAGTTGTTCTGCACTGAAGCCTCCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| 3UTR-3UTR TCA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAAAAGACCACAGAGTATTaGACAAGGGTTATTCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: YCKASGLTGHWEWEKEKKKTTEY*TRVIQL Trigger: CAGCTGAATAACCCTTGTTCAATACTCTGTGGTCTT...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR TCA 90 bp | CTACTAACCCAGGGCTTTTCAAGAGAAAGGAGGCTTCAGTGCAGAACAACTTCCGCCACTGGTTCAAACTaGAGAAAACAGTATAATCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLTQGFSRERRLQCRTTSATGSN*RKQYNL Trigger: GAGATTATACTGTTTTCTTCAGTTTGAACCAGTGGC...GGAAGTTGTTCTGCACTGAAGCCTCCTTTCTCTTGAAAAGCCCTGGGTTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCACATAAGAACACTTACTaGAAAGCTTCAGGACTAACC | + |
|
Preference number: 2 (lower is better) Translates to: KEYHVNQYRTALSSPSPPHKNTY*KASGLT Trigger: GGTTAGTCCTGAAGCTTTGCAGTAAGTGTTCTTATG...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CCA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGGGACTAACCGGTCACTaGGAGTGGGAAAAGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: NLQDLEAKPKHKRYAALKGLTGH*EWEKEK Trigger: CTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCC...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCCATAAGAACACTTACTaGAAAGCTTCAGGACTAACC | + |
|
Preference number: 2 (lower is better) Translates to: LEQQQHINSGSEDRTEDSHKNTY*KASGLT Trigger: GGTTAGTCCTGAAGCTTTGCAGTAAGTGTTCTTATG...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CCA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAAAAGCAGGGAGTGGTaGTGCACACCTTTAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: NLQDLEAKPKHKRYAALKKSREW*CTPLIP Trigger: TGGGATTAAAGGTGTGCACCACCACTCCCTGCTTTT...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGCAGGCCAAGAACCACTGCTTATGTCTCCAGTTGCTAATTTTCAAACTTAACAGTGAGAAGCCAAGATaGAGGGTAAAGTTTGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: LQAKNHCLCLQLLIFKLNSEKPR*RVKFEM Trigger: CATTTCAAACTTTACCCTGCATCTTGGCTTCTCACT...GTTAAGTTTGAAAATTAGCAACTGGAGACATAAGCAGTGGTTCTTGGCCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTAAAACTAACACACACTTaGGAACATTTATCCAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: LSLICSDRGSTPIIHSVLKLTHT*EHLSKP Trigger: AGGTTTGGATAAATGTTCCCAAGTGTGTGTTAGTTT...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CCA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGCTGCCTTTCAAAGTCTaGTCCCAGAATCTAAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: NLQDLEAKPKHKRYAALKLPFKV*SQNLNQ Trigger: TTGGTTTAGATTCTGGGACCAGACTTTGAAAGGCAG...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR GCA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGCGTACTTTCCCAAGATaGTCAAACACTAATGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NLQDLEAKPKHKRYAALKRTFPR*SNTNVK Trigger: TTTCACATTAGTGTTTGAGCATCTTGGGAAAGTACG...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CCA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAAACTAACACACACTTaGGAACATTTATCCAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: NLQDLEAKPKHKRYAALKKLTHT*EHLSKP Trigger: AGGTTTGGATAAATGTTCCCAAGTGTGTGTTAGTTT...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR CCA 72 bp | GCAGGAGAGCAGGAGCTTTGCTGTCCCTCCACTCCCTaGGCTCCCCGTGGGAACCATTCAGCCCCAATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: AGEQELCCPSTP*APRGNHSAPML Trigger: TAGCATTGGGGCTGAATGGTTCCCACGGGGAGCCCAGGGAGTGGAGGGACAGCAAAGCTCCTGCTCTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR TCA 72 bp | CTAAGAAGGCAGAGGCAGGTGAATCTCTGTGAGTCCTaGGGCCAGCCTGGTCTACCCAGACAGGAGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRRQRQVNLCES*GQPGLPRQEGY Trigger: GTAGCCCTCCTGTCTGGGTAGACCAGGCTGGCCTCAGGACTCACAGAGATTCACCTGCCTCTGCCTTCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTAGCCTAGCGCTTTGGTaGGAACACCACACCTTACGC | + |
|
Preference number: 3 (lower is better) Translates to: QPSLRASSRTARSIQRNPSLALW*EHHTLR Trigger: GCGTAAGGTGTGGTGTTCCAACCAAAGCGCTAGGCT...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCAGGAGAGCAGGAGCTTaGCTGTCCCTCCACTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LEAKPKHKRYAALKRLSPRRAGA*LSLHSL Trigger: CAGGGAGTGGAGGGACAGCAAAGCTCCTGCTCTCCT...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR GCA 72 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATaGTCAAACACTAATGTGAAACAATGGACCCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: GAVHGLNRTFPR*SNTNVKQWTQC Trigger: GCATTGGGTCCATTGTTTCACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR GCA 72 bp | CTAACCCAGGGCTTTTCAAGAGAAAGGAGGCTTCAGTaGAGAACAACTTCCCCACACCCTTCCTTAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LTQGFSRERRLQ*RTTSPHPSLEQ Trigger: CTGTTCTAAGGAAGGGTGTGGGGAAGTTGTTCTGCACTGAAGCCTCCTTTCTCTTGAAAAGCCCTGGGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| 3UTR CCA 72 bp | AGATATGCAGCTCTGAAGAGATTAAGCCCCGGCTTCTaGCCAGTACCATCTTTAAGGCTAACATGCCGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RYAALKRLSPGF*PVPSLRLTCRM Trigger: CATCCGGCATGTTAGCCTTAAAGATGGTACTGGCCAGAAGCCGGGGCTTAATCTCTTCAGAGCTGCATATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCAATACCGGCTCTTAGCTaGCAAAACAGCCTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: YKGTCNQRERPVTLPRISIPALS*QNSLFL Trigger: AAGGAAGAGGCTGTTTTGCAAGCTAAGAGCCGGTAT...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR GCA 72 bp | CCTCTTCCTTACAGTAGACTGGAAGGTGAGTCTGCCTaGCCTTACAGCTGGTATTTTACTCAAAGCCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: PLPYSRLEGESA*PYSWYFTQSLT Trigger: AGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAGTCTACTGTAAGGAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAATACCGGCTCTTAGCTaGCAAAACAGCCTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KEYHVNQYRTALSSPSPPIPALS*QNSLFL Trigger: AAGGAAGAGGCTGTTTTGCAAGCTAAGAGCCGGTAT...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCCTAACTCACAGCATCTaGGACAAGTCAACTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LEAKPKHKRYAALKRLSPLTHSI*DKSTEV Trigger: GACCTCAGTTGACTTGTCCAAGATGCTGTGAGTTAG...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGGGTCCCATAGGTGGGTaGTTTGGCATATCTCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NLQDLEAKPKHKRYAALKGPIGG*FGISQS Trigger: AGACTGAGATATGCCAAACAACCCACCTATGGGACC...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGATACCGGCTCTTAGCTaGCAAAACAGCCTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLQDLEAKPKHKRYAALKIPALS*QNSLFL Trigger: AAGGAAGAGGCTGTTTTGCAAGCTAAGAGCCGGTAT...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGCTAACTCACAGCATCTaGGACAAGTCAACTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: NLQDLEAKPKHKRYAALKLTHSI*DKSTEV Trigger: GACCTCAGTTGACTTGTCCAAGATGCTGTGAGTTAG...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR GCA 72 bp | CTAGACCATGAATTCCCACTGCAGGCCAAGAACCACTaGTTATGTCTCCAGTTGCTAATTTTCAAACTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LDHEFPLQAKNH*LCLQLLIFKLN Trigger: GTTAAGTTTGAAAATTAGCAACTGGAGACATAAGCAGTGGTTCTTGGCCTGCAGTGGGAATTCATGGTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| 3UTR TCA 72 bp | TTCCTAATCACAGTCACTTTTTCAGTCCAACAATGGTaGTTCATCCTTTTACTCCCAGCAGTGAGAAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLITVTFSVQQW*FILLLPAVRRQ Trigger: TTGCCTTCTCACTGCTGGGAGTAAAAGGATGAATCACCATTGTTGGACTGAAAAAGTGACTGTGATTAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR CCA 72 bp | ACTTTCCCAAGATGCTCAAACACTAATGTGAAACAATaGACCCAATGCTACAACTACAACGCTAACATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TFPRCSNTNVKQ*TQCYNYNANIQ Trigger: CTGGATGTTAGCGTTGTAGTTGTAGCATTGGGTCCATTGTTTCACATTAGTGTTTGAGCATCTTGGGAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCAAAACTAACACACACTaGGGAACATTTATCCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LEAKPKHKRYAALKRLSPKTNTH*GTFIQT Trigger: GGTTTGGATAAATGTTCCCAAGTGTGTGTTAGTTTT...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR TCA 72 bp | TCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTaGAACAATGGACCCAATGCTACAACTACAACGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SIVLSQDAQTLM*NNGPNATTTTL Trigger: TAGCGTTGTAGTTGTAGCATTGGGTCCATTGTTTCACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR TCA 72 bp | AATCGACATTTTAGTATAATGATCTTCTCTAGACCATaGATTCCCACTGCAGGCCAAGAACCACTGCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: NRHFSIMIFSRP*IPTAGQEPLLM Trigger: CATAAGCAGTGGTTCTTGGCCTGCAGTGGGAATTCATGGTCTAGAGAAGATCATTATACTAAAATGTCGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| 3UTR GCA 72 bp | CAAACTGAAGAAAACAGTATAATCTCCACTTCGGCTTaGAATAGCTTCTCTGAAGTACAGGAAGATACGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QTEENSIISTSA*NSFSEVQEDTF Trigger: AAACGTATCTTCCTGTACTTCAGAGAAGCTATTGCAAGCCGAAGTGGAGATTATACTGTTTTCTTCAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTAAGTCTGGGAGACGCTaGAACCGATGGTGGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSLRASSRTARSIQRNPKSGRR*NRWWLR Trigger: GCGGAGCCACCATCGGTTCCAGCGTCTCCCAGACTT...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGAAGTCTGGGAGACGCTaGAACCGATGGTGGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVKSGRR*NRWWLR Trigger: GCGGAGCCACCATCGGTTCCAGCGTCTCCCAGACTT...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | GGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATCAGAGGTATTGGGACTaGCCCCTTCAGGCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGAVHGLNRTFPRCSNTNQRYWD*PLQAQC Trigger: GCACTGAGCCTGAAGGGGTCAGTCCCAATACCTCTG...ATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTCGCTGGAACCGATGGTaGCTCCGCTTGTTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPSLRASSRTARSIQRNPRWNRW*LRLFLS Trigger: TGACAGAAACAAGCGGAGCCACCATCGGTTCCAGCG...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAAAGTCTGGGAGACGCTaGAACCGATGGTGGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KEYHVNQYRTALSSPSPPKSGRR*NRWWLR Trigger: GCGGAGCCACCATCGGTTCCAGCGTCTCCCAGACTT...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| 3UTR CAA 72 bp | GGACATCCATTAAGACAGTACACAGAGCCTAGCGCTTaGGTTGGAACACCACACCTTACGCGGTGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHPLRQYTEPSA*VGTPHLTRCMV Trigger: CACCATGCACCGCGTAAGGTGTGGTGTTCCAACCAAAGCGCTAGGCTCTGTGTACTGTCTTAATGGATGTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTTCGTGTGGTAAGATCTaGAGGATGCTGCCAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSLRASSRTARSIQRNPSCGKI*RMLPVW Trigger: CCAGACTGGCAGCATCCTTCAGATCTTACCACACGA...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGGTAAGATCTGAAGGATaGTGCCAGTCTGGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVVRSEG*CQSGCC Trigger: GCAGCACCCAGACTGGCAGCATCCTTCAGATCTTAC...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGGACCTCTGAATGGTTaGAGATCCCTTCAGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGAVHGLNRTFPRCSNTNGPLNG*RSLQAQ Trigger: CTGAGCCTGAAGGGATCTCCAACCATTCAGAGGTCC...ATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGGTGAGTCTGCCTGCCCTTACAGCTGGTATTTTACTCAAAGCCTGACTAGACGCTGGAACCGATaGTGGCTCCGCTTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEGESACPYSWYFTQSLTRRWNR*WLRLFL Trigger: CAGAAACAAGCGGAGCCACCATCGGTTCCAGCGTCT...AGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCAAGACGCTGGAACCGATaGTGGCTCCGCTTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YKGTCNQRERPVTLPRISRRWNR*WLRLFL Trigger: CAGAAACAAGCGGAGCCACCATCGGTTCCAGCGTCT...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAAAAGTCTGGGAGACGCTaGAACCGATGGTGGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YCKASGLTGHWEWEKEKKKSGRR*NRWWLR Trigger: GCGGAGCCACCATCGGTTCCAGCGTCTCCCAGACTT...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATACTGTAGGAGAAGTCTaGGAGACGCTGGAACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GGAVHGLNRTFPRCSNTNTVGEV*ETLEPM Trigger: CATCGGTTCCAGCGTCTCCCAGACTTCTCCTACAGT...ATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | TGGTGCACACCTTTAATCCCAGCACTAAGAAGGCAGAGGCAGGTGAATCTCTGTTCGTGTGGTAAGATCTaGAGGATGCTGCCAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WCTPLIPALRRQRQVNLCSCGKI*RMLPVW Trigger: CCAGACTGGCAGCATCCTTCAGATCTTACCACACGA...ACAGAGATTCACCTGCCTCTGCCTTCTTAGTGCTGGGATTAAAGGTGTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CTGGAAGGTGAGTCTGCCTGCCCTTACAGCTGGTATTTTACTCAAAGCCTGACTTCGTGTGGTAAGATCTaGAGGATGCTGCCAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEGESACPYSWYFTQSLTSCGKI*RMLPVW Trigger: CCAGACTGGCAGCATCCTTCAGATCTTACCACACGA...AGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCCAGAGGTATTGGGACTaGCCCCTTCAGGCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEQQQHINSGSEDRTEDSQRYWD*PLQAQC Trigger: GCACTGAGCCTGAAGGGGTCAGTCCCAATACCTCTG...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGGAATGGTTGGAGATCTaGGAGAACACAGGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVEWLEI*ENTGVG Trigger: ACCTACCCCTGTGTTCTCTCAGATCTCCAACCATTC...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
||
| CDS-3UTR GCA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCAGTAAGATCTGAAGGATaGTGCCAGTCTGGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YKGTCNQRERPVTLPRISVRSEG*CQSGCC Trigger: GCAGCACCCAGACTGGCAGCATCCTTCAGATCTTAC...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTAGGGGTTTCAGCTGCTaGTCCCAAGCTGTACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPSLRASSRTARSIQRNPRGFSC*SQAVQR Trigger: TCTTTGTACAGCTTGGGACCAGCAGCTGAAACCCCT...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGCACACCTTTAATCCCAGCACTAAGAAGGCAGAGGCAGGTGAATCTCTGTGGACCTCTGAATGGTTaGAGATCCCTTCAGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WCTPLIPALRRQRQVNLCGPLNG*RSLQAQ Trigger: CTGAGCCTGAAGGGATCTCCAACCATTCAGAGGTCC...ACAGAGATTCACCTGCCTCTGCCTTCTTAGTGCTGGGATTAAAGGTGTGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGTCTCCCAAGGTACCTTaGTTAGAGTCCCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVSPKVP*LESPGS Trigger: AGATCCAGGGGACTCTAACCAAGGTACCTTGGGAGA...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTAGGATGCTGCCAGTCTaGGTGCTGCATATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPSLRASSRTARSIQRNPRMLPV*VLHMNL Trigger: CAAGTTCATATGCAGCACCCAGACTGGCAGCATCCT...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CTGGAAGGTGAGTCTGCCTGCCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGGAACCCCAAGGAAATaGGGCATTGCTTTTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEGESACPYSWYFTQSLTGTPRK*GIAFRQ Trigger: CTGCCTAAAAGCAATGCCTCATTTCCTTGGGGTTCC...AGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCATCTCCCAAGGTACCTTaGTTAGAGTCCCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: YKGTCNQRERPVTLPRISSPKVP*LESPGS Trigger: AGATCCAGGGGACTCTAACCAAGGTACCTTGGGAGA...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCCGCTGGAACCGATGGTaGCTCCGCTTGTTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEQQQHINSGSEDRTEDSRWNRW*LRLFLS Trigger: TGACAGAAACAAGCGGAGCCACCATCGGTTCCAGCG...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTACGCTGGAACCGATGGTaGCTCCGCTTGTTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLICSDRGSTPIIHSVLRWNRW*LRLFLS Trigger: TGACAGAAACAAGCGGAGCCACCATCGGTTCCAGCG...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | CCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGTTCTGACTTAATGCAGGCCCGCTGGAACCGATGGTaGCTCCGCTTGTTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLQLVFYSKPDCSDLMQARWNRW*LRLFLS Trigger: TGACAGAAACAAGCGGAGCCACCATCGGTTCCAGCG...GGCCTGCATTAAGTCAGAACAGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAAAGACGCTGGAACCGATaGTGGCTCCGCTTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YCKASGLTGHWEWEKEKKRRWNR*WLRLFL Trigger: CAGAAACAAGCGGAGCCACCATCGGTTCCAGCGTCT...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGGGACCTCTGAATGGTTaGAGATCTGAGAGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVGPLNG*RSERTQ Trigger: CTGTGTTCTCTCAGATCTCCAACCATTCAGAGGTCC...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | CAGTGCAGAACAACTTCCCCACACCCTTCCTTAGAACAGCCCCAAGTACCTACAGTTGCCATGTTACCTTaGTTAGAGTCCCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QCRTTSPHPSLEQPQVPTVAMLP*LESPGS Trigger: AGATCCAGGGGACTCTAACCAAGGTAACATGGCAAC...TGTAGGTACTTGGGGCTGTTCTAAGGAAGGGTGTGGGGAAGTTGTTCTGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR TCA 90 bp | CCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGTTCTGACTTAATGCAGGCCTCGTGTGGTAAGATCTaGAGGATGCTGCCAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLQLVFYSKPDCSDLMQASCGKI*RMLPVW Trigger: CCAGACTGGCAGCATCCTTCAGATCTTACCACACGA...GGCCTGCATTAAGTCAGAACAGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR TCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGCTAGGAGTAGGTCCATaGCCAACTGATGTACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVLGVGP*PTDVLS Trigger: ACTAAGTACATCAGTTGGTCATGGACCTACTCCTAG...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
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| CDS-3UTR TCA 90 bp | CTACTAACCCAGGGCTTTTCAAGAGAAAGGAGGCTTCAGTGCAGAACAACTTCCGAATGGTTGGAGATCTaGGAGAACACAGGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGFSRERRLQCRTTSEWLEI*ENTGVG Trigger: ACCTACCCCTGTGTTCTCTCAGATCTCCAACCATTC...GGAAGTTGTTCTGCACTGAAGCCTCCTTTCTCTTGAAAAGCCCTGGGTTAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR CCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAAGGATGCTGCCAGTCTaGGTGCTGCATATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEYHVNQYRTALSSPSPPRMLPV*VLHMNL Trigger: CAAGTTCATATGCAGCACCCAGACTGGCAGCATCCT...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCACTGTAGGAGAAGTCTaGGAGACGCTGGAACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LEQQQHINSGSEDRTEDSTVGEV*ETLEPM Trigger: CATCGGTTCCAGCGTCTCCCAGACTTCTCCTACAGT...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTAACTGTAGGAGAAGTCTaGGAGACGCTGGAACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLICSDRGSTPIIHSVLTVGEV*ETLEPM Trigger: CATCGGTTCCAGCGTCTCCCAGACTTCTCCTACAGT...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCAGGACCTCTGAATGGTTaGAGATCTGAGAGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: YKGTCNQRERPVTLPRISGPLNG*RSERTQ Trigger: CTGTGTTCTCTCAGATCTCCAACCATTCAGAGGTCC...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | AACATCATCATCCCCAGCTCAGTTCACAACCCTCAACTACAGGGGAGAGAGTCAGGACCTCTGAATGGTTaGAGATCTGAGAGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: NIIIPSSVHNPQLQGRESGPLNG*RSERTQ Trigger: CTGTGTTCTCTCAGATCTCCAACCATTCAGAGGTCC...TGACTCTCTCCCCTGTAGTTGAGGGTTGTGAACTGAGCTGGGGATGATGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR TCA 90 bp | CCTTTAAAGTTAGAAACTACTAACCCAGGGCTTTTCAAGAGAAAGGAGGCTTCACAGAGGTATTGGGACTaGCCCCTTCAGGCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLKLETTNPGLFKRKEASQRYWD*PLQAQC Trigger: GCACTGAGCCTGAAGGGGTCAGTCCCAATACCTCTG...TGAAGCCTCCTTTCTCTTGAAAAGCCCTGGGTTAGTAGTTTCTAACTTTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR GCA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCGTAAGATCTGAAGGATaGTGCCAGTCTGGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEAKPKHKRYAALKRLSPVRSEG*CQSGCC Trigger: GCAGCACCCAGACTGGCAGCATCCTTCAGATCTTAC...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCAGGGGTTTCAGCTGCTaGTCCCAAGCTGTACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEQQQHINSGSEDRTEDSRGFSC*SQAVQR Trigger: TCTTTGTACAGCTTGGGACCAGCAGCTGAAACCCCT...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCTCTCCCAAGGTACCTTaGTTAGAGTCCCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LEQQQHINSGSEDRTEDSSPKVP*LESPGS Trigger: AGATCCAGGGGACTCTAACCAAGGTACCTTGGGAGA...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTAAGGATGCTGCCAGTCTaGGTGCTGCATATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLICSDRGSTPIIHSVLRMLPV*VLHMNL Trigger: CAAGTTCATATGCAGCACCCAGACTGGCAGCATCCT...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR TCA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCGGAACCCCAAGGAAATaGGGCATTGCTTTTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEAKPKHKRYAALKRLSPGTPRK*GIAFRQ Trigger: CTGCCTAAAAGCAATGCCTCATTTCCTTGGGGTTCC...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGTTTGTAGAACAGGAATaGCTTTGCCTAGTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVFVEQE*LCLVFS Trigger: AGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAA...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGGTCTGTTTGATGAACTaGACACAACTGGAATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVVCLMN*TQLEFS Trigger: TGAGAATTCCAGTTGTGTCCAGTTCATCAAACAGAC...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGTGTTGGTTAGAGTCCCCTaGATCTTCTATATGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAVHGLNRTFPRCSNTNVLVRVP*IFYMSN Trigger: ATTGCTCATATAGAAGATCCAGGGGACTCTAACCAA...CACATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTTTGGTTAGAGTCCCCTaGATCTTCTATATGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPSLRASSRTARSIQRNPLVRVP*IFYMSN Trigger: ATTGCTCATATAGAAGATCCAGGGGACTCTAACCAA...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGATTAAGCCCCTCTCCCAAGGTACCTTaGTTAGAGTCCCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LEAKPKHKRYAALKRLSPSPKVP*LESPGS Trigger: AGATCCAGGGGACTCTAACCAAGGTACCTTGGGAGA...GGGGCTTAATCTCTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGACGCTGGAACCGATaGTGGCTCCGCTTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLQDLEAKPKHKRYAALKRRWNR*WLRLFL Trigger: CAGAAACAAGCGGAGCCACCATCGGTTCCAGCGTCT...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATAGGATCACAAACTGTTaGATTAAATGGTGCGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGAVHGLNRTFPRCSNTNRITNC*IKWCDN Trigger: GTTGTCGCACCATTTAATCCAACAGTTTGTGATCCT...ATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
||
| 3UTR CAA 72 bp | TCAGAAGTGCAAGACCATCTTGGGTTAAATAGTGTGTaGATGGCTAGCCTAGGCTTTATAGGAGACCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEVQDHLGLNSV*MASLGFIGDPA Trigger: GGCAGGGTCTCCTATAAAGCCTAGGCTAGCCATCAACACACTATTTAACCCAAGATGGTCTTGCACTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CTGGAAGGTGAGTCTGCCTGCCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGGATCACAAATTAGTTaGGGTAGTTTTAGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEGESACPYSWYFTQSLTGSQIS*GSFRKP Trigger: TGGCTTCCTAAAACTACCTCAACTAATTTGTGATCC...AGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072431.13 |
||
| CDS-3UTR TCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTACTAGGAGTAGGTCCATaGCCAACTGATGTACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLICSDRGSTPIIHSVLLGVGP*PTDVLS Trigger: ACTAAGTACATCAGTTGGTCATGGACCTACTCCTAG...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTGATTTTCCGTTTCTTTaGAGGAATCGATCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPSLRASSRTARSIQRNPDFPFL*RNRSCL Trigger: AAGACAAGATCGATTCCTCCAAAGAAACGGAAAATC...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGGTGAGTCTGCCTGCCCTTACAGCTGGTATTTTACTCAAAGCCTGACTTTGGTTAGAGTCCCCTaGATCTTCTATATGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LEGESACPYSWYFTQSLTLVRVP*IFYMSN Trigger: ATTGCTCATATAGAAGATCCAGGGGACTCTAACCAA...AGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCATTGGTTAGAGTCCCCTaGATCTTCTATATGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YKGTCNQRERPVTLPRISLVRVP*IFYMSN Trigger: ATTGCTCATATAGAAGATCCAGGGGACTCTAACCAA...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CTAGCCCTTCAACAGGACTTTTCTCCTTCTCCTATTTCAAATGTACTGAATTGGGGAACCCCAAGGAAATaGGGCATTGCTTTTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LALQQDFSPSPISNVLNWGTPRK*GIAFRQ Trigger: CTGCCTAAAAGCAATGCCTCATTTCCTTGGGGTTCC...CCAATTCAGTACATTTGAAATAGGAGAAGGAGAAAAGTCCTGTTGAAGGGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CTAGCCCTTCAACAGGACTTTTCTCCTTCTCCTATTTCAAATGTACTGAATTGGGAATGGTTGGAGATCTaGGAGAACACAGGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LALQQDFSPSPISNVLNWEWLEI*ENTGVG Trigger: ACCTACCCCTGTGTTCTCTCAGATCTCCAACCATTC...CCAATTCAGTACATTTGAAATAGGAGAAGGAGAAAAGTCCTGTTGAAGGGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
||
| CDS-3UTR GCA 90 bp | CTACTAACCCAGGGCTTTTCAAGAGAAAGGAGGCTTCAGTGCAGAACAACTTCCAAGCCATTCTTTGGTTaGCATGTTACCTTGGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGFSRERRLQCRTTSKPFFG*HVTLVR Trigger: TCTAACCAAGGTAACATGGCAACCAAAGAATGGCTT...GGAAGTTGTTCTGCACTGAAGCCTCCTTTCTCTTGAAAAGCCCTGGGTTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATAATTTGACTCTTTCTTaGTCTATACTCATTATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGAVHGLNRTFPRCSNTNNLTLS*SILIMP Trigger: GGGCATAATGAGTATAGACCAAGAAAGAGTCAAATT...ATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTAATTTGACTCTTTCTTaGTCTATACTCATTATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPSLRASSRTARSIQRNPNLTLS*SILIMP Trigger: GGGCATAATGAGTATAGACCAAGAAAGAGTCAAATT...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCCCTTCAACAGGACTTTTCTCCTTCTCCTATTTCAAATGTACTGAATTGGAGGATGCTGCCAGTCTaGGTGCTGCATATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LALQQDFSPSPISNVLNWRMLPV*VLHMNL Trigger: CAAGTTCATATGCAGCACCCAGACTGGCAGCATCCT...CCAATTCAGTACATTTGAAATAGGAGAAGGAGAAAAGTCCTGTTGAAGGGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAAGGATCACAAACTGTTaGATTAAATGGTGCGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: KEYHVNQYRTALSSPSPPRITNC*IKWCDN Trigger: GTTGTCGCACCATTTAATCCAACAGTTTGTGATCCT...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | GCCCGAACCCTTTCTCTAATGTATGTTGTCCAAACCATTTTGCATAATTATCTGGGAACCCCAAGGAAATaGGGCATTGCTTTTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARTLSLMYVVQTILHNYLGTPRK*GIAFRQ Trigger: CTGCCTAAAAGCAATGCCTCATTTCCTTGGGGTTCC...CAGATAATTATGCAAAATGGTTTGGACAACATACATTAGAGAAAGGGTTCGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR TCA 90 bp | CCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGTTCTGACTTAATGCAGGCCTTTGTAGAACAGGAATaGCTTTGCCTAGTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLQLVFYSKPDCSDLMQAFVEQE*LCLVFS Trigger: AGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAA...GGCCTGCATTAAGTCAGAACAGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTATTTGTAGAACAGGAATaGCTTTGCCTAGTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLICSDRGSTPIIHSVLFVEQE*LCLVFS Trigger: AGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAA...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGGTGAGTCTGCCTGCCCTTACAGCTGGTATTTTACTCAAAGCCTGACTAACTGTTGGATTAAATaGTGCGACAACAGTTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEGESACPYSWYFTQSLTNCWIK*CDNSYF Trigger: AAAGTAACTGTTGTCGCACCATTTAATCCAACAGTT...AGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAAGTTAGAAACTACTAACCCAGGGCTTTTCAAGAGAAAGGAGGCTTCACTAGGAGTAGGTCCATaGCCAACTGATGTACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKLETTNPGLFKRKEASLGVGP*PTDVLS Trigger: ACTAAGTACATCAGTTGGTCATGGACCTACTCCTAG...TGAAGCCTCCTTTCTCTTGAAAAGCCCTGGGTTAGTAGTTTCTAACTTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR CCA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAAGATTTTCCGTTTCTTTaGAGGAATCGATCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YCKASGLTGHWEWEKEKKDFPFL*RNRSCL Trigger: AAGACAAGATCGATTCCTCCAAAGAAACGGAAAATC...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | AGTATAATCTCCACTTCGGCTTGCAATAGCTTCTCTGAAGTACAGGAAGATACGTTGGTTAGAGTCCCCTaGATCTTCTATATGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIISTSACNSFSEVQEDTLVRVP*IFYMSN Trigger: ATTGCTCATATAGAAGATCCAGGGGACTCTAACCAA...CGTATCTTCCTGTACTTCAGAGAAGCTATTGCAAGCCGAAGTGGAGATTATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR TCA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGTTTGTAGAACAGGAATaGCTTTGCCTAGTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLQDLEAKPKHKRYAALKFVEQE*LCLVFS Trigger: AGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAA...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCCCTTCAACAGGACTTTTCTCCTTCTCCTATTTCAAATGTACTGAATTGGGTCTGTTTGATGAACTaGACACAACTGGAATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LALQQDFSPSPISNVLNWVCLMN*TQLEFS Trigger: TGAGAATTCCAGTTGTGTCCAGTTCATCAAACAGAC...CCAATTCAGTACATTTGAAATAGGAGAAGGAGAAAAGTCCTGTTGAAGGGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCACTTCGGCTTGCAATAGCTTCTCTGAAGTACAGGAAGATACGTTTGAAGAACTGTTGGATTAAATaGTGCGACAACAGTTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLRLAIASLKYRKIRLKNCWIK*CDNSYF Trigger: AAAGTAACTGTTGTCGCACCATTTAATCCAACAGTT...CTTCAAACGTATCTTCCTGTACTTCAGAGAAGCTATTGCAAGCCGAAGTGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| 3UTR CAA 72 bp | ATTCACAAGTCAACAATAATAATACCGGCTCTTAGCTaGCAAAACAGCCTCTTCCTTACAGTAGACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IHKSTIIIPALS*QNSLFLTVDWK Trigger: CTTCCAGTCTACTGTAAGGAAGAGGCTGTTTTGCAAGCTAAGAGCCGGTATTATTATTGTTGACTTGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCTCTTTTCTCTTTAGAAATTTCCCATCAGCCACTGGTTCAAACTGAAGAAAGGATCACAAACTGTTaGATTAAATGGTGCGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SALFSLEISHQPLVQTEERITNC*IKWCDN Trigger: GTTGTCGCACCATTTAATCCAACAGTTTGTGATCCT...TTCTTCAGTTTGAACCAGTGGCTGATGGGAAATTTCTAAAGAGAAAAGAGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| 3UTR CAA 72 bp | CTTGCAATAGCTTCTCTGAAGTACAGGAAGATACGTTaGAAGGATCTAGAACATAGTTTAGGCTTTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAIASLKYRKIR*KDLEHSLGFQE Trigger: CTCTTGAAAGCCTAAACTATGTTCTAGATCCTTCAAACGTATCTTCCTGTACTTCAGAGAAGCTATTGCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCAATTATCGCTACTCTTCTCACATACACACTGAAGAGTTCTTTCCTCATTTTGTAGAACAGGAATaGCTTTGCCTAGTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYSSHIHTEEFFPHFVEQE*LCLVFS Trigger: AGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAA...ATGAGGAAAGAACTCTTCAGTGTGTATGTGAGAAGAGTAGCGATAATTGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTGAAGAAAACAGTATAATCTCCACTTCGGCTTGCAATAGCTTCTCTGAAGATTTTCCGTTTCTTTaGAGGAATCGATCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTEENSIISTSACNSFSEDFPFL*RNRSCL Trigger: AAGACAAGATCGATTCCTCCAAAGAAACGGAAAATC...TTCAGAGAAGCTATTGCAAGCCGAAGTGGAGATTATACTGTTTTCTTCAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR CCA 90 bp | ACATCTTTCTCAATTATCGCTACTCTTCTCACATACACACTGAAGAGTTCTTTCGTCTGTTTGATGAACTaGACACAACTGGAATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSFSIIATLLTYTLKSSFVCLMN*TQLEFS Trigger: TGAGAATTCCAGTTGTGTCCAGTTCATCAAACAGAC...GAAAGAACTCTTCAGTGTGTATGTGAGAAGAGTAGCGATAATTGAGAAAGATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAATTATCGCTACTCTTCTCACATACACACTGAAGAGTTCTTTCCTCATAATTTGACTCTTTCTTaGTCTATACTCATTATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLNYRYSSHIHTEEFFPHNLTLS*SILIMP Trigger: GGGCATAATGAGTATAGACCAAGAAAGAGTCAAATT...ATGAGGAAAGAACTCTTCAGTGTGTATGTGAGAAGAGTAGCGATAATTGAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS TCA 90 bp | AGACGCTGGAACCGATGGTGGCTCCGCTTGTTTCTGTCAACCCACTaGCTCAGACTGTACCTCTGCAGAGGCCTCTGTCGGAACCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRWNRWWLRLFLSTH*LRLYLCRGLCRNRA Trigger: CGCCCGGTTCCGACAGAGGCCTCTGCAGAGGTACAGTCTGAGTCAGTGGGTTGACAGAAACAAGCGGAGCCACCATCGGTTCCAGCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS TCA 90 bp | CAGAGGCCTCTGTCGGAACCGGGCGTAGTTTCGTGTGGTAAGATCTaGAGGATGCTGCCAGTCTGGGTGCTGCATATGAACTTGATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QRPLSEPGVVSCGKI*RMLPVWVLHMNLIH Trigger: ATGGATCAAGTTCATATGCAGCACCCAGACTGGCAGCATCCTTCAGATCTTACCACACGAAACTACGCCCGGTTCCGACAGAGGCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117497.8 ENSMUST00000117965.8 |
||
| CDS TCA 90 bp | GGACTGACCCCTTCAGGCTCAGTGCAACGTTTACTCTCATTAGGTTaGGGGTCATCTTCTCTCGTCTGTTCCCGAAGGGAGGCAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: GLTPSGSVQRLLSLG*GSSSLVCSRREAGF Trigger: AAATCCTGCCTCCCTTCGGGAACAGACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAACGTTGCACTGAGCCTGAAGGGGTCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 ENSMUST00000117350.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCAGGGACCTCTGAATGGTaGGAGATCCCTTCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KEYHVNQYRTALSSPSPPGTSEW*EIPSGS Trigger: TGAGCCTGAAGGGATCTCCAACCATTCAGAGGTCCC...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAGTCTAAGAGCGAGTTCCAGGACAGCCAGGAGTATACAAAGAAACCCTGCCTCCCCAGAATCCTaGTCAAAGGCATGTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QPSLRASSRTARSIQRNPASPES*SKACLF Trigger: AAACAGACATGCCTTTGACAAGGATTCTGGGGAGGC...AGGGTTTCTTTGTATACTCCTGGCTGTCCTGGAACTCGCTCTTAGACTGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATGCCTCCCCAGAATCCTaGTCAAAGGCATGTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GGAVHGLNRTFPRCSNTNASPES*SKACLF Trigger: AAACAGACATGCCTTTGACAAGGATTCTGGGGAGGC...ATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS TCA 90 bp | TTGGAGATCCCTTCAGGCTCAGTGCAACGTTTACTCTCATTAGGTTaGGGGTCATCTTCTCTCGTCTGTTCCCGAAGGGAGGCAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: LEIPSGSVQRLLSLG*GSSSLVCSRREAGF Trigger: AAATCCTGCCTCCCTTCGGGAACAGACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAACGTTGCACTGAGCCTGAAGGGATCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000117497.8 ENSMUST00000117965.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGCGGTGCACGGGCTCAATCGTACTTTCCCAAGATGCTCAAACACTAATCAAAGGCATGTCTGTTaGATGAACTGGACACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GGAVHGLNRTFPRCSNTNQRHVC*MNWTQL Trigger: CAGTTGTGTCCAGTTCATCAAACAGACATGCCTTTG...ATTAGTGTTTGAGCATCTTGGGAAAGTACGATTGAGCCCGTGCACCGCACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS CCA 90 bp | TTCTCACTTCACAACCTGATTTATGTGAGCCACTGTTTTTCCTGTTaGGGACCTCTGAATGGTTGGAGATCCCTTCAGGCTCAGTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FSLHNLIYVSHCFSC*GPLNGWRSLQAQCN Trigger: GTTGCACTGAGCCTGAAGGGATCTCCAACCATTCAGAGGTCCCCAACAGGAAAAACAGTGGCTCACATAAATCAGGTTGTGAAGTGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000117497.8 ENSMUST00000117965.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGCAGAACAACTTCCCCACACCCTTCCTTAGAACAGCCCCAAGTACCTACATTTACTCTCATTAGGTaGAGGGTCATCTTCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QCRTTSPHPSLEQPQVPTFTLIR*RVIFSR Trigger: ACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAA...TGTAGGTACTTGGGGCTGTTCTAAGGAAGGGTGTGGGGAAGTTGTTCTGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR CAA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAAGCCTCCCCAGAATCCTaGTCAAAGGCATGTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YCKASGLTGHWEWEKEKKASPES*SKACLF Trigger: AAACAGACATGCCTTTGACAAGGATTCTGGGGAGGC...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGCACACCTTTAATCCCAGCACTAAGAAGGCAGAGGCAGGTGAATCTCTGTAGAACAGGAATGACTTaGCCTAGTCTTCTCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: WCTPLIPALRRQRQVNLCRTGMT*PSLLSP Trigger: AGGTGAGAGAAGACTAGGCAAAGTCATTCCTGTTCT...ACAGAGATTCACCTGCCTCTGCCTTCTTAGTGCTGGGATTAAAGGTGTGCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAGGTGAGTCTGCCTGCCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGGATTTTCCGTTTCTTaGGAGGAATCGATCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEGESACPYSWYFTQSLTGFSVS*EESILS Trigger: AGACAAGATCGATTCCTCCAAAGAAACGGAAAATCC...AGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGGCAGGCAGACTCACCTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | TATAAGGGTACCTGTAACCAACGGGAGAGGCCAGTGACTCTCCCAAGGATTTCATTTACTCTCATTAGGTaGAGGGTCATCTTCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: YKGTCNQRERPVTLPRISFTLIR*RVIFSR Trigger: ACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAA...TGAAATCCTTGGGAGAGTCACTGGCCTCTCCCGTTGGTTACAGGTACCCTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGGGGACCTCTGAATGGTaGGAGATCCCTTCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLQDLEAKPKHKRYAALKGTSEW*EIPSGS Trigger: TGAGCCTGAAGGGATCTCCAACCATTCAGAGGTCCC...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 |
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| CDS-3UTR CAA 90 bp | ATTCCCACTGCAGGCCAAGAACCACTGCTTATGTCTCCAGTTGCTAATTTTCAAGCCTCCCCAGAATCCTaGTCAAAGGCATGTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IPTAGQEPLLMSPVANFQASPES*SKACLF Trigger: AAACAGACATGCCTTTGACAAGGATTCTGGGGAGGC...TTGAAAATTAGCAACTGGAGACATAAGCAGTGGTTCTTGGCCTGCAGTGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS CCA 90 bp | TCGCCTCCCCAGAATCCTTGTCAAAGGCATGTCTGTTTGATGAACTaGACACAACTGGAATTCTCACTTCACAACCTGATTTATGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPPQNPCQRHVCLMN*TQLEFSLHNLIYVS Trigger: GCTCACATAAATCAGGTTGTGAAGTGAGAATTCCAGTTGTGTCCAGTTCATCAAACAGACATGCCTTTGACAAGGATTCTGGGGAGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CCA 90 bp | CTTCTCTCGTCTGTTCCCGAAGGGAGGCAGGATTTTCCGTTTCTTTaGAGGAATCGATCTTGTCTTTATCAAGCACAGGATCACAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSVPEGRQDFPFL*RNRSCLYQAQDHKH Trigger: ATGTTTGTGATCCTGTGCTTGATAAAGACAAGATCGATTCCTCCAAAGAAACGGAAAATCCTGCCTCCCTTCGGGAACAGACGAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106059.8 |
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| CDS-3UTR CAA 90 bp | AAAGAATACCATGTTAACCAGTACAGAACAGCTCTCTCCTCCCCCAGTCCACCATTTACTCTCATTAGGTaGAGGGTCATCTTCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KEYHVNQYRTALSSPSPPFTLIR*RVIFSR Trigger: ACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAA...TGGTGGACTGGGGGAGGAGAGAGCTGTTCTGTACTGGTTAACATGGTATTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CAA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCCAAAGGCATGTCTGTTaGATGAACTGGACACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LEQQQHINSGSEDRTEDSQRHVC*MNWTQL Trigger: CAGTTGTGTCCAGTTCATCAAACAGACATGCCTTTG...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGTTCTGACTTAATGCAGGCCCAAAGGCATGTCTGTTaGATGAACTGGACACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: PLQLVFYSKPDCSDLMQAQRHVC*MNWTQL Trigger: CAGTTGTGTCCAGTTCATCAAACAGACATGCCTTTG...GGCCTGCATTAAGTCAGAACAGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGCAGAACAACTTCCCCACACCCTTCCTTAGAACAGCCCCAAGTACCTACAGTTTGTTCGATGTTATaGTTTGAAGGAGAAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QCRTTSPHPSLEQPQVPTVCSML*FEGEES Trigger: GCTTTCTTCTCCTTCAAACAATAACATCGAACAAAC...TGTAGGTACTTGGGGCTGTTCTAAGGAAGGGTGTGGGGAAGTTGTTCTGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS CCA 90 bp | CTTCTCTCGTCTGTTCCCGAAGGGAGGCAGGATTTTCCGTTTCTTTaGAGGAATCGATCTTGTCTTTATCAAGCACAGGATCACAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: LLSSVPEGRQDFPFL*RNRSCLYQAQDHKL Trigger: TAATTTGTGATCCTGTGCTTGATAAAGACAAGATCGATTCCTCCAAAGAAACGGAAAATCCTGCCTCCCTTCGGGAACAGACGAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072431.13 |
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| CDS-3UTR CAA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAACAAGGAAATGAGGCATaGCTTTTAGGCAGAAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YCKASGLTGHWEWEKEKKQGNEA*LLGRKE Trigger: CTCTTTTCTGCCTAAAAGCAATGCCTCATTTCCTTG...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | CCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGTTCTGACTTAATGCAGGCCCAAGGAAATGAGGCATaGCTTTTAGGCAGAAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLQLVFYSKPDCSDLMQAQGNEA*LLGRKE Trigger: CTCTTTTCTGCCTAAAAGCAATGCCTCATTTCCTTG...GGCCTGCATTAAGTCAGAACAGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAATTGGAGGAATCGATCTaGTCTTTATCAAGCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YCKASGLTGHWEWEKEKKLEESI*SLSSTG Trigger: TCCTGTGCTTGATAAAGACAAGATCGATTCCTCCAA...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | CTGTCACTCATCTGCTCTGACAGAGGCAGCACTCCCATTATACATTCAGTCTTATTGGAGGAATCGATCTaGTCTTTATCAAGCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLICSDRGSTPIIHSVLLEESI*SLSSTG Trigger: TCCTGTGCTTGATAAAGACAAGATCGATTCCTCCAA...TAAGACTGAATGTATAATGGGAGTGCTGCCTCTGTCAGAGCAGATGAGTGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | CCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGTTCTGACTTAATGCAGGCCGGATTTTCCGTTTCTTaGGAGGAATCGATCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLQLVFYSKPDCSDLMQAGFSVS*EESILS Trigger: AGACAAGATCGATTCCTCCAAAGAAACGGAAAATCC...GGCCTGCATTAAGTCAGAACAGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAAGGATTTTCCGTTTCTTaGGAGGAATCGATCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YCKASGLTGHWEWEKEKKGFSVS*EESILS Trigger: AGACAAGATCGATTCCTCCAAAGAAACGGAAAATCC...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | TACTGCAAAGCTTCAGGACTAACCGGTCACTGGGAGTGGGAAAAGGAAAAGAAATTTACTCTCATTAGGTaGAGGGTCATCTTCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: YCKASGLTGHWEWEKEKKFTLIR*RVIFSR Trigger: ACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAA...TTTCTTTTCCTTTTCCCACTCCCAGTGACCGGTTAGTCCTGAAGCTTTGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | CCCTTACAGCTGGTATTTTACTCAAAGCCTGACTGTTCTGACTTAATGCAGGCCTTTACTCTCATTAGGTaGAGGGTCATCTTCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PLQLVFYSKPDCSDLMQAFTLIR*RVIFSR Trigger: ACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAA...GGCCTGCATTAAGTCAGAACAGTCAGGCTTTGAGTAAAATACCAGCTGTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | TTTCTCAATTATCGCTACTCTTCTCACATACACACTGAAGAGTTCTTTCCTCATGGTTGCCATGTTACCTaGGTTAGAGTCCCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: FLNYRYSSHIHTEEFFPHGCHVT*VRVPWI Trigger: GATCCAGGGGACTCTAACCAAGGTAACATGGCAACC...ATGAGGAAAGAACTCTTCAGTGTGTATGTGAGAAGAGTAGCGATAATTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR CAA 90 bp | CTGCAGGCCAAGAACCACTGCTTATGTCTCCAGTTGCTAATTTTCAAACTTAACCAAGGAAATGAGGCATaGCTTTTAGGCAGAAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQAKNHCLCLQLLIFKLNQGNEA*LLGRKE Trigger: CTCTTTTCTGCCTAAAAGCAATGCCTCATTTCCTTG...GTTAAGTTTGAAAATTAGCAACTGGAGACATAAGCAGTGGTTCTTGGCCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR CAA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGCAAAGGCATGTCTGTTaGATGAACTGGACACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: NLQDLEAKPKHKRYAALKQRHVC*MNWTQL Trigger: CAGTTGTGTCCAGTTCATCAAACAGACATGCCTTTG...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | CCTTTAAAGTTAGAAACTACTAACCCAGGGCTTTTCAAGAGAAAGGAGGCTTCACAAAGGCATGTCTGTTaGATGAACTGGACACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: PLKLETTNPGLFKRKEASQRHVC*MNWTQL Trigger: CAGTTGTGTCCAGTTCATCAAACAGACATGCCTTTG...TGAAGCCTCCTTTCTCTTGAAAAGCCCTGGGTTAGTAGTTTCTAACTTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR CAA 90 bp | CTAGCCCTTCAACAGGACTTTTCTCCTTCTCCTATTTCAAATGTACTGAATTGGAGAACAGGAATGACTTaGCCTAGTCTTCTCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LALQQDFSPSPISNVLNWRTGMT*PSLLSP Trigger: AGGTGAGAGAAGACTAGGCAAAGTCATTCCTGTTCT...CCAATTCAGTACATTTGAAATAGGAGAAGGAGAAAAGTCCTGTTGAAGGGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | AATCTACAAGACTTAGAGGCCAAACCCAAACATAAGAGATATGCAGCTCTGAAGAGAACAGGAATGACTTaGCCTAGTCTTCTCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: NLQDLEAKPKHKRYAALKRTGMT*PSLLSP Trigger: AGGTGAGAGAAGACTAGGCAAAGTCATTCCTGTTCT...CTTCAGAGCTGCATATCTCTTATGTTTGGGTTTGGCCTCTAAGTCTTGTAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | CTTGAACAGCAGCAACACATAAACTCGGGTTCCGAAGACAGAACTGAAGATTCCGTTTGTTCGATGTTATaGTTTGAAGGAGAAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEQQQHINSGSEDRTEDSVCSML*FEGEES Trigger: GCTTTCTTCTCCTTCAAACAATAACATCGAACAAAC...GGAATCTTCAGTTCTGTCTTCGGAACCCGAGTTTATGTGTTGCTGCTGTTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | TCTCCACTTCGGCTTGCAATAGCTTCTCTGAAGTACAGGAAGATACGTTTGAAGTTTATAAGCCATTCTTaGGTTGCCATGTTACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPLRLAIASLKYRKIRLKFISHS*VAMLPW Trigger: CCAAGGTAACATGGCAACCAAAGAATGGCTTATAAA...CTTCAAACGTATCTTCCTGTACTTCAGAGAAGCTATTGCAAGCCGAAGTGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR CAA 90 bp | CTAGCCCTTCAACAGGACTTTTCTCCTTCTCCTATTTCAAATGTACTGAATTGGGGATTTTCCGTTTCTTaGGAGGAATCGATCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LALQQDFSPSPISNVLNWGFSVS*EESILS Trigger: AGACAAGATCGATTCCTCCAAAGAAACGGAAAATCC...CCAATTCAGTACATTTGAAATAGGAGAAGGAGAAAAGTCCTGTTGAAGGGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 |
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| CDS-3UTR CAA 90 bp | GCCCGAACCCTTTCTCTAATGTATGTTGTCCAAACCATTTTGCATAATTATCTGAGAACAGGAATGACTTaGCCTAGTCTTCTCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ARTLSLMYVVQTILHNYLRTGMT*PSLLSP Trigger: AGGTGAGAGAAGACTAGGCAAAGTCATTCCTGTTCT...CAGATAATTATGCAAAATGGTTTGGACAACATACATTAGAGAAAGGGTTCGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS CCA 90 bp | TATAAGCCATTCTTTGGTTGCCATGTTACCTTGGTTAGAGTCCCCTaGATCTTCTATATGAGCAATGACTTTGCTGAGATAAATGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YKPFFGCHVTLVRVP*IFYMSNDFAEINVL Trigger: AAGGACATTTATCTCAGCAAAGTCATTGCTCATATAGAAGATCCAGGGGACTCTAACCAAGGTAACATGGCAACCAAAGAATGGCTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCTCTTTTCTCTTTAGAAATTTCCCATCAGCCACTGGTTCAAACTGAAGAAGGATTTTCCGTTTCTTaGGAGGAATCGATCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SALFSLEISHQPLVQTEEGFSVS*EESILS Trigger: AGACAAGATCGATTCCTCCAAAGAAACGGAAAATCC...TTCTTCAGTTTGAACCAGTGGCTGATGGGAAATTTCTAAAGAGAAAAGAGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS-3UTR CAA 90 bp | CTAGCCCTTCAACAGGACTTTTCTCCTTCTCCTATTTCAAATGTACTGAATTGGGTTTGTTCGATGTTATaGTTTGAAGGAGAAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LALQQDFSPSPISNVLNWVCSML*FEGEES Trigger: GCTTTCTTCTCCTTCAAACAATAACATCGAACAAAC...CCAATTCAGTACATTTGAAATAGGAGAAGGAGAAAAGTCCTGTTGAAGGGCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 |
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| CDS CAA 72 bp | GGAGAAGAAAGCAGGGGCCCATCCCAAGCAGAGGTATaGGGACTGACCCCTTCAGGCTCAGTGCAACGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GEESRGPSQAEV*GLTPSGSVQRL Trigger: TAAACGTTGCACTGAGCCTGAAGGGGTCAGTCCCAATACCTCTGCTTGGGATGGGCCCCTGCTTTCTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 ENSMUST00000117350.2 |
||
| CDS TCA 72 bp | CTGTCGGAACCGGGCGTAGTTTCGTGTGGTAAGATCTaGAGGATGCTGCCAGTCTGGGTGCTGCATATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSEPGVVSCGKI*RMLPVWVLHMN Trigger: GTTCATATGCAGCACCCAGACTGGCAGCATCCTTCAGATCTTACCACACGAAACTACGCCCGGTTCCGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS TCA 72 bp | AAAGCAGGGGCCCATCCCAAGCAGAGGTATTGGGACTaGCCCCTTCAGGCTCAGTGCAACGTTTACTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: KAGAHPKQRYWD*PLQAQCNVYSH Trigger: ATGAGAGTAAACGTTGCACTGAGCCTGAAGGGGTCAGTCCCAATACCTCTGCTTGGGATGGGCCCCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 ENSMUST00000117350.2 |
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| CDS CAA 90 bp | GGGACTGACCCCTTCAGGCTCAGTGCAACGTTTACTCTCATTAGGTaGAGGGTCATCTTCTCTCGTCTGTTCCCGAAGGGAGGCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: GTDPFRLSATFTLIR*RVIFSRLFPKGGRI Trigger: AATCCTGCCTCCCTTCGGGAACAGACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAACGTTGCACTGAGCCTGAAGGGGTCAGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 ENSMUST00000117350.2 |
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| CDS CAA 90 bp | GTTGGAGATCCCTTCAGGCTCAGTGCAACGTTTACTCTCATTAGGTaGAGGGTCATCTTCTCTCGTCTGTTCCCGAAGGGAGGCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: VGDPFRLSATFTLIR*RVIFSRLFPKGGRI Trigger: AATCCTGCCTCCCTTCGGGAACAGACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAACGTTGCACTGAGCCTGAAGGGATCTCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000117497.8 ENSMUST00000117965.8 |
||
| CDS CAA 72 bp | CCCTTCAGGCTCAGTGCAACGTTTACTCTCATTAGGTaGAGGGTCATCTTCTCTCGTCTGTTCCCGAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PFRLSATFTLIR*RVIFSRLFPKG Trigger: TCCCTTCGGGAACAGACGAGAGAAGATGACCCTCAACCTAATGAGAGTAAACGTTGCACTGAGCCTGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
||
| CDS CAA 72 bp | GAGCCACTGTTTTTCCTGTTGGGGACCTCTGAATGGTaGGAGATCCCTTCAGGCTCAGTGCAACGTTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: EPLFFLLGTSEW*EIPSGSVQRLL Trigger: GAGTAAACGTTGCACTGAGCCTGAAGGGATCTCCAACCATTCAGAGGTCCCCAACAGGAAAAACAGTGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000117497.8 ENSMUST00000117965.8 |
||
| CDS CAA 90 bp | TTGTTTGAAGGAGAAGAAAGCAGGGGCCCATCCCAAGCAGAGGTATaGGGACTGACCCCTTCAGGCTCAGTGCAACGTTTACTCTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: LFEGEESRGPSQAEV*GLTPSGSVQRLLSL Trigger: TAATGAGAGTAAACGTTGCACTGAGCCTGAAGGGGTCAGTCCCAATACCTCTGCTTGGGATGGGCCCCTGCTTTCTTCTCCTTCAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 ENSMUST00000117350.2 |
||
| CDS CCA 72 bp | AGCCACTGTTTTTCCTGTTGGGGACCTCTGAATGGTTaGAGATCCCTTCAGGCTCAGTGCAACGTTTACTCT | + |
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Preference number: 6 (lower is better) Translates to: SHCFSCWGPLNG*RSLQAQCNVYS Trigger: AGAGTAAACGTTGCACTGAGCCTGAAGGGATCTCCAACCATTCAGAGGTCCCCAACAGGAAAAACAGTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CAA 90 bp | ATTCTCACTTCACAACCTGATTTATGTGAGCCACTGTTTTTCCTGTaGGGGACCTCTGAATGGTTGGAGATCCCTTCAGGCTCAGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: ILTSQPDLCEPLFFL*GTSEWLEIPSGSVQ Trigger: TTGCACTGAGCCTGAAGGGATCTCCAACCATTCAGAGGTCCCCAACAGGAAAAACAGTGGCTCACATAAATCAGGTTGTGAAGTGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CAA 72 bp | GTCTGTTCCCGAAGGGAGGCAGGATTTTCCGTTTCTTaGGAGGAATCGATCTTGTCTTTATCAAGCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: VCSRREAGFSVS*EESILSLSSTG Trigger: TCCTGTGCTTGATAAAGACAAGATCGATTCCTCCAAAGAAACGGAAAATCCTGCCTCCCTTCGGGAACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CCA 72 bp | TCTGTTCCCGAAGGGAGGCAGGATTTTCCGTTTCTTTaGAGGAATCGATCTTGTCTTTATCAAGCACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SVPEGRQDFPFL*RNRSCLYQAQD Trigger: ATCCTGTGCTTGATAAAGACAAGATCGATTCCTCCAAAGAAACGGAAAATCCTGCCTCCCTTCGGGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CAA 72 bp | AACATCCTGGTTCTAGTTTGTAGAACAGGAATGACTTaGCCTAGTCTTCTCTCACCTTTCGCCTCCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: NILVLVCRTGMT*PSLLSPFASPE Trigger: TTCTGGGGAGGCGAAAGGTGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAACTAGAACCAGGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CAA 90 bp | GATTGTGAAAACATCCTGGTTCTAGTTTGTAGAACAGGAATGACTTaGCCTAGTCTTCTCTCACCTTTCGCCTCCCCAGAATCCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: DCENILVLVCRTGMT*PSLLSPFASPESLS Trigger: TGACAAGGATTCTGGGGAGGCGAAAGGTGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAACTAGAACCAGGATGTTTTCACAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CAA 90 bp | TCCCGAAGGGAGGCAGGATTTTCCGTTTCTTTGGAGGAATCGATCTaGTCTTTATCAAGCACAGGATCACAAACTGTTGGATTAAATGGT | + |
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Preference number: 6 (lower is better) Translates to: SRREAGFSVSLEESI*SLSSTGSQTVGLNG Trigger: ACCATTTAATCCAACAGTTTGTGATCCTGTGCTTGATAAAGACAAGATCGATTCCTCCAAAGAAACGGAAAATCCTGCCTCCCTTCGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CAA 72 bp | GAGGCAGGATTTTCCGTTTCTTTGGAGGAATCGATCTaGTCTTTATCAAGCACAGGATCACAAACTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: EAGFSVSLEESI*SLSSTGSQTVG Trigger: TCCAACAGTTTGTGATCCTGTGCTTGATAAAGACAAGATCGATTCCTCCAAAGAAACGGAAAATCCTGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CCA 72 bp | CAGAATCCTTGTCAAAGGCATGTCTGTTTGATGAACTaGACACAACTGGAATTCTCACTTCACAACCTGATT | + |
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Preference number: 6 (lower is better) Translates to: QNPCQRHVCLMN*TQLEFSLHNLI Trigger: AATCAGGTTGTGAAGTGAGAATTCCAGTTGTGTCCAGTTCATCAAACAGACATGCCTTTGACAAGGATTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000049081.12 ENSMUST00000072431.13 ENSMUST00000106059.8 ENSMUST00000106061.9 ENSMUST00000117350.2 ENSMUST00000117497.8 ENSMUST00000117965.8 |
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| CDS CCA 72 bp | TTCTTTGGTTGCCATGTTACCTTGGTTAGAGTCCCCTaGATCTTCTATATGAGCAATGACTTTGCTGAGATA | + |
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Preference number: 6 (lower is better) Translates to: FFGCHVTLVRVP*IFYMSNDFAEI Trigger: TATCTCAGCAAAGTCATTGCTCATATAGAAGATCCAGGGGACTCTAACCAAGGTAACATGGCAACCAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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| CDS CAA 72 bp | GGTATATTTTTATCAGAGGCAGTTTGTTCGATGTTATaGTTTGAAGGAGAAGAAAGCAGGGGCCCATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: GIFLSEAVCSML*FEGEESRGPSQ Trigger: TTGGGATGGGCCCCTGCTTTCTTCTCCTTCAAACAATAACATCGAACAAACTGCCTCTGATAAAAATATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049081.12 ENSMUST00000106061.9 ENSMUST00000117350.2 |
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| CDS CAA 90 bp | CCTAAACCCATGTTTTATAAGCCATTCTTTGGTTGCCATGTTACCTaGGTTAGAGTCCCCTGGATCTTCTATATGAGCAATGACTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: PKPMFYKPFFGCHVT*VRVPWIFYMSNDFA Trigger: AGCAAAGTCATTGCTCATATAGAAGATCCAGGGGACTCTAACCAAGGTAACATGGCAACCAAAGAATGGCTTATAAAACATGGGTTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117350.2 |
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