Pregenerated sensors for S100G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040808Ensembl transcript IDs: ENSMUST00000038769.3
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ATAATCGCACAGCTAGAGCTTCAGGATTGGAGAGCGTaGGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: IIAQLELQDWRA*VQSVGAVGTPS Trigger: AGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTGAAGCTCTAGCTGTGCGATTAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| 3UTR GCA 72 bp | ACTCAGTACTTGATAAGAGAGACGTGTCTCCGAACTTaGTTTATTAACAGTATGTATCATAATCGCACAGCT | + |
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Preference number: 3 (lower is better) Translates to: TQYLIRETCLRT*FINSMYHNRTA Trigger: AGCTGTGCGATTATGATACATACTGTTAATAAAGCAAGTTCGGAGACACGTCTCTCTTATCAAGTACTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR CCA 90 bp | CAGGATTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTTCCTCCTCCTTGGAGAGCTaGTCCGGATCGCCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QDWRACVQSVGAVGTPSSSSLES*SGSPSL Trigger: CAAGGAAGGCGATCCGGACCAGCTCTCCAAGGAGGA...GGAAGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR CCA 90 bp | CAGGATTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTTCCGCTTTAGCTCCTCCTTaGAGAGCTGGTCCGGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: QDWRACVQSVGAVGTPSSALAPP*RAGPDR Trigger: GCGATCCGGACCAGCTCTCCAAGGAGGAGCTAAAGC...GGAAGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR TCA 90 bp | CAGGATTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTTCCCTGGGGAACTCTGACTaGATCAGCAGCTTTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDWRACVQSVGAVGTPSSLGNSD*ISSFSS Trigger: GGAGCTAAAGCTGCTGATTCAGTCAGAGTTCCCCAG...GGAAGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR TCA 90 bp | CAGGATTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTTCCATTGTCCAGAGTACTTaGAGCCTTCAGGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QDWRACVQSVGAVGTPSSIVQST*SLQEAG Trigger: CCCAGCCTCCTGAAGGCTTCAAGTACTCTGGACAAT...GGAAGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR CCA 90 bp | CAGGATTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTTCCAAGCCTTCAGGAGGCTaGGGAACTCTGACTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QDWRACVQSVGAVGTPSSKPSGG*GTLTES Trigger: TGATTCAGTCAGAGTTCCCCAGCCTCCTGAAGGCTT...GGAAGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR GCA 90 bp | CAGGATTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTTCCAATGCTCTTCATTTCTaGAGGAGACTTCTCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QDWRACVQSVGAVGTPSSNALHF*RRLLST Trigger: TGTGCTGAGAAGTCTCCTGCAGAAATGAAGAGCATT...GGAAGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR GCA 90 bp | CTTCAGGATTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTATCGCCTTCCTTGGCTaGATATTTTTGAAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQDWRACVQSVGAVGTPSIAFLG*IFLKNA Trigger: AGCATTTTTCAAAAATATGCAGCCAAGGAAGGCGAT...AGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS TCA 90 bp | TTGTCCAGAGTACTTGAAGCCTTCAGGAGGCTGGGGAACTCTGACTaGATCAGCAGCTTTAGCTCCTCCTTGGAGAGCTGGTCCGGATCG | + |
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Preference number: 5 (lower is better) Translates to: LSRVLEAFRRLGNSD*ISSFSSSLESWSGS Trigger: CGATCCGGACCAGCTCTCCAAGGAGGAGCTAAAGCTGCTGATTCAGTCAGAGTTCCCCAGCCTCCTGAAGGCTTCAAGTACTCTGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS CCA 90 bp | GGAGGCTGGGGAACTCTGACTGAATCAGCAGCTTTAGCTCCTCCTTaGAGAGCTGGTCCGGATCGCCTTCCTTGGCTGCATATTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGWGTLTESAALAPP*RAGPDRLPWLHIFE Trigger: TTCAAAAATATGCAGCCAAGGAAGGCGATCCGGACCAGCTCTCCAAGGAGGAGCTAAAGCTGCTGATTCAGTCAGAGTTCCCCAGCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR CAA 90 bp | TTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTTCCTGACTAGCTTTAGCTCCTCCTaGGAGAGCTGGTCCGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: LESVRSISRCCWNSFFLTSFSSS*ESWSGS Trigger: CGATCCGGACCAGCTCTCCAAGGAGGAGCTAAAGCT...AGTCAGGAAGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR CAA 90 bp | CTTCAGGATTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTAGCTCCTTAAAGAGATaGTCCAGAGTACTTGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: LQDWRACVQSVGAVGTPSSSLKR*SRVLEA Trigger: GGCTTCAAGTACTCTGGACAATCTCTTTAAGGAGCT...AGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAATCCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS-3UTR CAA 90 bp | TTGGAGAGCGTGCGTTCAATCAGTAGGTGCTGTTGGAACTCCTTCTTCCTGACTCATTGTGAGAGCTTTTaGAAGAAAGCTTCGAATTCT | + |
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Preference number: 5 (lower is better) Translates to: LESVRSISRCCWNSFFLTHCESF*KKASNS Trigger: AGAATTCGAAGCTTTCTTCAAAAAGCTCTCACAATG...AGTCAGGAAGAAGGAGTTCCAACAGCACCTACTGATTGAACGCACGCTCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS CCA 72 bp | AGAGATTGTCCAGAGTACTTGAAGCCTTCAGGAGGCTaGGGAACTCTGACTGAATCAGCAGCTTTAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RDCPEYLKPSGG*GTLTESAALAP Trigger: AGGAGCTAAAGCTGCTGATTCAGTCAGAGTTCCCCAGCCTCCTGAAGGCTTCAAGTACTCTGGACAATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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| CDS CAA 72 bp | TCTCCATCGCCATTCTTATCCAGCTCCTTAAAGAGATaGTCCAGAGTACTTGAAGCCTTCAGGAGGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPSPFLSSSLKR*SRVLEAFRRLG Trigger: CCCCAGCCTCCTGAAGGCTTCAAGTACTCTGGACAATCTCTTTAAGGAGCTGGATAAGAATGGCGATGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038769.3 |
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