Pregenerated sensors for S100B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033208Ensembl transcript IDs: ENSMUST00000036387.8
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTATGTGTGTCTAGAGAGCTCAGCTCCTTCGAGCCCATGAGCCTTTaGTGTGCCTCCTCTTGTGACCCTCATGTCTGTTGCAGAAACAGC | + |
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Preference number: 1 (lower is better) Translates to: LCVSRELSSFEPMSL*CASSCDPHVCCRNS Trigger: GCTGTTTCTGCAACAGACATGAGGGTCACAAGAGGAGGCACAGCAAAGGCTCATGGGCTCGAAGGAGCTGAGCTCTCTAGACACACATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR TCA 90 bp | CTAATTAGTTATGTGTGTCTAGAGAGCTCAGCTCCTTCGAGCCCATaGGCCTTTGCTGTGCCTCCTCTTGTGACCCTCATGTCTGTTGCA | + |
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Preference number: 1 (lower is better) Translates to: LISYVCLESSAPSSP*AFAVPPLVTLMSVA Trigger: TGCAACAGACATGAGGGTCACAAGAGGAGGCACAGCAAAGGCTCATGGGCTCGAAGGAGCTGAGCTCTCTAGACACACATAACTAATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR CCA 90 bp | ATCAGCTCGTCCTGTGAATCTCAACTTCCGCAGCCACTCACATTATaGACAGCAGAGGGAGCAAGGAAGATACAACTAACTAGAAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: ISSSCESQLPQPLTL*TAEGARKIQLTRKR Trigger: TCTTTTTCTAGTTAGTTGTATCTTCCTTGCTCCCTCTGCTGTCCATAATGTGAGTGGCTGCGGAAGTTGAGATTCACAGGACGAGCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR CCA 90 bp | CTGTTGGCATTAAATATTTACTTAGTAACGAATCACTGCACACTGTaGAAGAAGAGACTTAAGTGTGGCTGTGCTCCTCTGAGCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLALNIYLVTNHCTL*KKRLKCGCAPLSWG Trigger: TCCCCAGCTCAGAGGAGCACAGCCACACTTAAGTCTCTTCTTCCACAGTGTGCAGTGATTCGTTACTAAGTAAATATTTAATGCCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR GCA 90 bp | CAGTTAGAACTGTTGGCATTAAATATTTACTTAGTAACGAATCACTaGACACTGTGGAAGAAGAGACTTAAGTGTGGCTGTGCTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: QLELLALNIYLVTNH*TLWKKRLKCGCAPL Trigger: CAGAGGAGCACAGCCACACTTAAGTCTCTTCTTCCACAGTGTGCAGTGATTCGTTACTAAGTAAATATTTAATGCCAACAGTTCTAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGCTGGGGAAGGGTGTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATCCCTGGGAAGGGGGTTaGGGTTTCATCCCCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SELGKGVGDQSVYFLEHHPWEGG*GFIPKA Trigger: TGCTTTGGGGATGAAACCCCAACCCCCTTCCCAGGG...ATGATGCTCCAGAAAGTAGACAGACTGATCGCCTACACCCTTCCCCAGCTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGCTGGGGAAGGGTGTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATGAGCCCATGAGCCTTTaGTGTGCCTCCTCTTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: SELGKGVGDQSVYFLEHHEPMSL*CASSCD Trigger: GTCACAAGAGGAGGCACAGCAAAGGCTCATGGGCTC...ATGATGCTCCAGAAAGTAGACAGACTGATCGCCTACACCCTTCCCCAGCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATTTGCTCAGGCAGATGGCACTGTGCCTCCTCTTGTaGCCCTCATGTCTGTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: VGDQSVYFLEHHLLRQMALCLLL*PSCLLQ Trigger: CTGCAACAGACATGAGGGTCACAAGAGGAGGCACAG...TGCCATCTGCCTGAGCAAATGATGCTCCAGAAAGTAGACAGACTGATCGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR CAA 90 bp | GGGAAGGGTGTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATTaGCTCAGGCAGATGGCAAGCAGGTGTAAGGATGAGCAACCTCTT | + |
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Preference number: 2 (lower is better) Translates to: GKGVGDQSVYFLEHH*LRQMASRCKDEQPL Trigger: AAGAGGTTGCTCATCCTTACACCTGCTTGCCATCTGCCTGAGCAAATGATGCTCCAGAAAGTAGACAGACTGATCGCCTACACCCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAATCTCAACTTCCGCAGCCACTCACATTATGGACAGCAGAGGGAGCAAGGCTTGATTCTTACAGGTaGCTCTTCTACAGGGGCATG | + |
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Preference number: 2 (lower is better) Translates to: CESQLPQPLTLWTAEGARLDSYR*LFYRGM Trigger: CATGCCCCTGTAGAAGAGTCACCTGTAAGAATCAAG...CCTTGCTCCCTCTGCTGTCCATAATGTGAGTGGCTGCGGAAGTTGAGATTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGCTGGGGAAGGGTGTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATGACCCTCATGTCTGTTaGAGAAACAGCTCAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: SELGKGVGDQSVYFLEHHDPHVC*RNSSAT Trigger: AGTAGCTGAGCTGTTTCTGCAACAGACATGAGGGTC...ATGATGCTCCAGAAAGTAGACAGACTGATCGCCTACACCCTTCCCCAGCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGAATCTCAACTTCCGCAGCCACTCACATTATGGACAGCAGAGGGAGCAAGGTTCTGGAGCATCATTTaGTCAGGCAGATGGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: CESQLPQPLTLWTAEGARFWSII*SGRWQA Trigger: TGCTTGCCATCTGCCTGAGCAAATGATGCTCCAGAA...CCTTGCTCCCTCTGCTGTCCATAATGTGAGTGGCTGCGGAAGTTGAGATTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGCTGGGGAAGGGTGTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATTTATCAACAGAGCGTTaGTCTCATCCCCTAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: SELGKGVGDQSVYFLEHHLSTER*SHPLSD Trigger: GTCACTTAGGGGATGAGATCAACGCTCTGTTGATAA...ATGATGCTCCAGAAAGTAGACAGACTGATCGCCTACACCCTTCCCCAGCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR CCA 90 bp | TATTTGAATATGCAAGTTAGAAAGCCTCAAGTCCAGCTTCCCACAGTCCTCGACCCAGCAGGTCAGACATaGCTCCCAGCAGCTAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YLNMQVRKPQVQLPTVLDPAGQT*LPAAKG Trigger: TCCTTTAGCTGCTGGGAGCCATGTCTGACCTGCTGG...GTCGAGGACTGTGGGAAGCTGGACTTGAGGCTTTCTAACTTGCATATTCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGCAGCCACTCACATTATGGACAGCAGAGGGAGCAAGGAAGATACAACTAAGTCTGTCTACTTTCTaGAGCATCATTTGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPQPLTLWTAEGARKIQLSLSTF*SIICSG Trigger: GCCTGAGCAAATGATGCTCCAGAAAGTAGACAGACT...TAGTTGTATCTTCCTTGCTCCCTCTGCTGTCCATAATGTGAGTGGCTGCGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR CAA 90 bp | GAACAAAGCGATCATCCTGAAAGGAGAAGTCTGCCGAGCAGAATTTaGATTCTCGGTCCTGAGTTAGAATGTTCATACTTAGTTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: EQSDHPERRSLPSRI*ILGPELECSYLVCE Trigger: CTCACAAACTAAGTATGAACATTCTAACTCAGGACCGAGAATCAAAATTCTGCTCGGCAGACTTCTCCTTTCAGGATGATCGCTTTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAATTTTGATTCTCGGTCCTGAGTTAGAATGTTCATACTTAGTTTGTGAGTTAGTAACGAATCACTaGACACTGTGGAAGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SRILILGPELECSYLVCELVTNH*TLWKKR Trigger: TCTCTTCTTCCACAGTGTGCAGTGATTCGTTACTAA...CTCACAAACTAAGTATGAACATTCTAACTCAGGACCGAGAATCAAAATTCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR TCA 72 bp | CTTCGAGCCCATGAGCCTTTGCTGTGCCTCCTCTTGTaGCCCTCATGTCTGTTGCAGAAACAGCTCAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: LRAHEPLLCLLL*PSCLLQKQLSY Trigger: GTAGCTGAGCTGTTTCTGCAACAGACATGAGGGTCACAAGAGGAGGCACAGCAAAGGCTCATGGGCTCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR TCA 72 bp | TGTGGAAGAAGAGACTTAAGTGTGGCTGTGCTCCTCTaGGCTGGGGAAGGGTGTAGGCGATCAGTCTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: CGRRDLSVAVLL*AGEGCRRSVCL Trigger: TAGACAGACTGATCGCCTACACCCTTCCCCAGCTCAGAGGAGCACAGCCACACTTAAGTCTCTTCTTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR TCA 72 bp | GAAGTACTGTTGGTAGTCTGCCTTGATTCTTACAGGTaGCTCTTCTACAGGGGCATGGTGGTCAGCAACACG | + |
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Preference number: 3 (lower is better) Translates to: EVLLVVCLDSYR*LFYRGMVVSNT Trigger: CGTGTTGCTGACCACCATGCCCCTGTAGAAGAGTCACCTGTAAGAATCAAGGCAGACTACCAACAGTACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCCGCAGCCACTCACATTATGGACAGCAGAGGGAGCAAGGAAGATACAACTACTGCCGAGCAGAATTTaGATTCTCGGTCCTGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: LPQPLTLWTAEGARKIQLLPSRI*ILGPEL Trigger: TAACTCAGGACCGAGAATCAAAATTCTGCTCGGCAG...TAGTTGTATCTTCCTTGCTCCCTCTGCTGTCCATAATGTGAGTGGCTGCGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR CCA 72 bp | TTAAATATTTACTTAGTAACGAATCACTGCACACTGTaGAAGAAGAGACTTAAGTGTGGCTGTGCTCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LNIYLVTNHCTL*KKRLKCGCAPL Trigger: CAGAGGAGCACAGCCACACTTAAGTCTCTTCTTCCACAGTGTGCAGTGATTCGTTACTAAGTAAATATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| 3UTR GCA 72 bp | CTGTTGGCATTAAATATTTACTTAGTAACGAATCACTaGACACTGTGGAAGAAGAGACTTAAGTGTGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LLALNIYLVTNH*TLWKKRLKCGC Trigger: ACAGCCACACTTAAGTCTCTTCTTCCACAGTGTGCAGTGATTCGTTACTAAGTAAATATTTAATGCCAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR CCA 90 bp | TCTAGAGAGCTCAGCTCCTTCGAGCCCATGAGCCTTTGCTGTGCCTCCTCTTGTTGTTCAAAGAACTCATaGCAGGCCGTGGTCACCATG | + |
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Preference number: 4 (lower is better) Translates to: SRELSSFEPMSLCCASSCCSKNS*QAVVTM Trigger: CATGGTGACCACGGCCTGCCATGAGTTCTTTGAACA...ACAAGAGGAGGCACAGCAAAGGCTCATGGGCTCGAAGGAGCTGAGCTCTCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR GCA 90 bp | TCTGAGCTGGGGAAGGGTGTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATTTGTCCACCACTTCCTaGTCCTTGATTTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SELGKGVGDQSVYFLEHHLSTTS*SLISSR Trigger: CCTGGAGGAAATCAAGGAGCAGGAAGTGGTGGACAA...ATGATGCTCCAGAAAGTAGACAGACTGATCGCCTACACCCTTCCCCAGCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR CCA 90 bp | GTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATTTGCTCAGGCAGATGGCATCTCGCCCGGAGTACTaGTGGAAGACATCAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: VGDQSVYFLEHHLLRQMASRPEY*WKTSMR Trigger: CCTCATTGATGTCTTCCACCAGTACTCCGGGCGAGA...TGCCATCTGCCTGAGCAAATGATGCTCCAGAAAGTAGACAGACTGATCGCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR TCA 90 bp | CTTCCGCAGCCACTCACATTATGGACAGCAGAGGGAGCAAGGAAGATACAACTAAAGCTCCTTCAGTTCTaGCTTCTTCAGCTTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LPQPLTLWTAEGARKIQLKLLQF*LLQLVL Trigger: AAGCACAAGCTGAAGAAGTCAGAACTGAAGGAGCTT...TAGTTGTATCTTCCTTGCTCCCTCTGCTGTCCATAATGTGAGTGGCTGCGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR TCA 90 bp | AGCAGAATTTTGATTCTCGGTCCTGAGTTAGAATGTTCATACTTAGTTTGTGAGTGGCGACGAAGGCCATaGACTCCTGGAAGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: SRILILGPELECSYLVCEWRRRP*TPGSHT Trigger: AGTGTGACTTCCAGGAGTTCATGGCCTTCGTCGCCA...CTCACAAACTAAGTATGAACATTCTAACTCAGGACCGAGAATCAAAATTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR TCA 90 bp | GGCATTAAATATTTACTTAGTAACGAATCACTGCACACTGTGGAAGAAGAGACTCCACTTCCTGCTCCTTaGTTTCCTCCAGGAAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GIKYLLSNESLHTVEEETPLPAP*FPPGSE Trigger: CTCACTTCCTGGAGGAAATCAAGGAGCAGGAAGTGG...AGTCTCTTCTTCCACAGTGTGCAGTGATTCGTTACTAAGTAAATATTTAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR CAA 90 bp | TCTGAGCTGGGGAAGGGTGTAGGCGATCAGTCTGTCTACTTTCTGGAGCATCATAGCGTCTCCATCACTTaGTCCACCACTTCCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SELGKGVGDQSVYFLEHHSVSIT*STTSCS Trigger: GGAGCAGGAAGTGGTGGACAAAGTGATGGAGACGCT...ATGATGCTCCAGAAAGTAGACAGACTGATCGCCTACACCCTTCCCCAGCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR CAA 90 bp | AGCAGAATTTTGATTCTCGGTCCTGAGTTAGAATGTTCATACTTAGTTTGTGAGTTCTTCAGCTTGTGCTaGTCACCCTCTCGCCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: SRILILGPELECSYLVCEFFSLC*SPSRPE Trigger: CTCCGGGCGAGAGGGTGACAAGCACAAGCTGAAGAA...CTCACAAACTAAGTATGAACATTCTAACTCAGGACCGAGAATCAAAATTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS-3UTR CAA 90 bp | GGCATTAAATATTTACTTAGTAACGAATCACTGCACACTGTGGAAGAAGAGACTTCTGACTTCTTCAGCTaGTGCTTGTCACCCTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: GIKYLLSNESLHTVEEETSDFFS*CLSPSR Trigger: GCGAGAGGGTGACAAGCACAAGCTGAAGAAGTCAGA...AGTCTCTTCTTCCACAGTGTGCAGTGATTCGTTACTAAGTAAATATTTAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS TCA 72 bp | CATGGCAGGCCGTGGTCACCATGGCGACGAAGGCCATaGACTCCTGGAAGTCACACTCCCCATCCCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: HGRPWSPWRRRP*TPGSHTPHPHL Trigger: AAGATGGGGATGGGGAGTGTGACTTCCAGGAGTTCATGGCCTTCGTCGCCATGGTGACCACGGCCTGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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| CDS CAA 72 bp | TCCCCATCCCCATCTTCGTCCAGCGTCTCCATCACTTaGTCCACCACTTCCTGCTCCTTGATTTCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SPSPSSSSVSIT*STTSCSLISSR Trigger: CCTGGAGGAAATCAAGGAGCAGGAAGTGGTGGACAAAGTGATGGAGACGCTGGACGAAGATGGGGATGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036387.8 |
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