Pregenerated sensors for S100A7L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091175Ensembl transcript IDs: ENSMUST00000166173.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | ACAGAAGAAAGGTGGGCAGAACTGCTTAGGAGCTCTTaGCATGGCTATGTCCACCCTCTTCAATGCCATGCA | + |
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Preference number: 3 (lower is better) Translates to: TEERWAELLRSS*HGYVHPLQCHA Trigger: TGCATGGCATTGAAGAGGGTGGACATAGCCATGTCAAGAGCTCCTAAGCAGTTCTGCCCACCTTTCTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS-3UTR TCA 90 bp | GCTCTTGACATGGCTATGTCCACCCTCTTCAATGCCATGCACATTGATGTGATGCCAGAGCATAATTTGTaGAGTTCCTGTAGAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: ALDMAMSTLFNAMHIDVMPEHNL*SSCRAS Trigger: TGATGCTCTACAGGAACTTCACAAATTATGCTCTGG...CATCACATCAATGTGCATGGCATTGAAGAGGGTGGACATAGCCATGTCAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| 3UTR CAA 72 bp | CACATCCACAATTTCAGTGCCTATGACGATAAATTTTaGAAGCACTGGTTGGACAGAAGAAAGGTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HIHNFSAYDDKF*KHWLDRRKVGR Trigger: TCTGCCCACCTTTCTTCTGTCCAACCAGTGCTTCAAAAATTTATCGTCATAGGCACTGAAATTGTGGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS-3UTR GCA 90 bp | ATTTCACTGCAGCTTCCACACACATCCACAATTTCAGTGCCTATGACGATAAATAGCATCATTATTTTGTaGTCACTTGGGGTCAATCCT | + |
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Preference number: 4 (lower is better) Translates to: ISLQLPHTSTISVPMTINSIIIL*SLGVNP Trigger: AGGATTGACCCCAAGTGAGCACAAAATAATGATGCT...ATTTATCGTCATAGGCACTGAAATTGTGGATGTGTGTGGAAGCTGCAGTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS-3UTR CCA 90 bp | CACAATTTCAGTGCCTATGACGATAAATTTTTGAAGCACTGGTTGGACAGAAGATATTTTGTGCTCACTTaGGGTCAATCCTTGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: HNFSAYDDKFLKHWLDRRYFVLT*GQSLVH Trigger: ATGGACCAAGGATTGACCCCAAGTGAGCACAAAATA...TCTTCTGTCCAACCAGTGCTTCAAAAATTTATCGTCATAGGCACTGAAATTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS-3UTR CCA 90 bp | ACACACATCCACAATTTCAGTGCCTATGACGATAAATTTTTGAAGCACTGGTTGTTCCTGGAGAAAATTTaGAAATTCACTTCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: THIHNFSAYDDKFLKHWLFLEKI*KFTSHQ Trigger: TTGGTGAGAAGTGAATTTCCAAATTTTCTCCAGGAA...CAACCAGTGCTTCAAAAATTTATCGTCATAGGCACTGAAATTGTGGATGTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS-3UTR CAA 90 bp | TTTTATTTCACTGCAGCTTCCACACACATCCACAATTTCAGTGCCTATGACGATTTATTTTGTGCTCACTaGGGGTCAATCCTTGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: FYFTAASTHIHNFSAYDDLFCAH*GSILGP Trigger: TGGACCAAGGATTGACCCCAAGTGAGCACAAAATAA...ATCGTCATAGGCACTGAAATTGTGGATGTGTGTGGAAGCTGCAGTGAAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS GCA 90 bp | ACACCATTCCCATTCTTCCTATCACATTCAAAGCCTCTTCAAAGCTaGGGTCCTTTGGTTCATCCAATAGTATACTTAAAGGAGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: TPFPFFLSHSKPLQS*GPLVHPIVYLKEFL Trigger: AAGAAACTCCTTTAAGTATACTATTGGATGAACCAAAGGACCGCAGCTTTGAAGAGGCTTTGAATGTGATAGGAAGAATGGGAATGGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS-3UTR CAA 90 bp | TCACTGCAGCTTCCACACACATCCACAATTTCAGTGCCTATGACGATAAATTTTCTTCCTGGAGAAAATTaGGAAATTCACTTCTCACCA | + |
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Preference number: 5 (lower is better) Translates to: SLQLPHTSTISVPMTINFLPGEN*EIHFSP Trigger: TGGTGAGAAGTGAATTTCCAAATTTTCTCCAGGAAG...AAAATTTATCGTCATAGGCACTGAAATTGTGGATGTGTGTGGAAGCTGCAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS GCA 72 bp | CCATTCTTCCTATCACATTCAAAGCCTCTTCAAAGCTaGGGTCCTTTGGTTCATCCAATAGTATACTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: PFFLSHSKPLQS*GPLVHPIVYLK Trigger: CTTTAAGTATACTATTGGATGAACCAAAGGACCGCAGCTTTGAAGAGGCTTTGAATGTGATAGGAAGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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| CDS CAA 72 bp | CTATCACATTCAAAGCCTCTTCAAAGCTGCGGTCCTTaGGTTCATCCAATAGTATACTTAAAGGAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSHSKPLQSCGP*VHPIVYLKEFL Trigger: AAGAAACTCCTTTAAGTATACTATTGGATGAACCAAAGGACCGCAGCTTTGAAGAGGCTTTGAATGTGATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166173.3 |
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