Pregenerated sensors for S100A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001023Ensembl transcript IDs: ENSMUST00000001049.5, ENSMUST00000107329.8
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGAAGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCGACCATGGTGGTCAGTaGCTTCTCAAGAGGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RRAGAIGGAVKEAAEVRIDHGGQ*LLKRSL Trigger: GAGACTCCTCTTGAGAAGGCACTGACCACCATGGTC...GATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CCA 90 bp | GAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTCCTGAGGCCATGCACAGCGTaGTCAGGAACACAGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: EGQLKRLQRSGSGAASVLRPCTA*SGTQST Trigger: AGTACTCTGTGTTCCTGACCACGCTGTGCATGGCCT...CAGGACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CCA 90 bp | GCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGAGGCCATGCACAGCGTaGTCAGGAACACAGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: AIGGAVKEAAEVRIRSCQRPCTA*SGTQST Trigger: AGTACTCTGTGTTCCTGACCACGCTGTGCATGGCCT...CTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR TCA 90 bp | GGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTCCTACACAGAGTACTCCTTaGAGTCAATCTCCTGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: GGAVKEAAEVRIRSCQCPTQSTP*SQSPGR Trigger: GCGACCAGGAGATTGACTTCAAGGAGTACTCTGTGT...AGGACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR GCA 90 bp | GAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTCCTGAGTCATTGTAGGCCATaGACAGCGTGGTCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: EGQLKRLQRSGSGAASVLSHCRP*TAWSGT Trigger: TGTTCCTGACCACGCTGTGCATGGCCTACAATGACT...CAGGACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCATTTATGGAAAGTGGTaGCCATGGTGGTCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RRAGAIGGAVKEAAEVRIIYGKW*PWWSVP Trigger: AGGCACTGACCACCATGGTCACCACTTTCCATAAAT...GATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR TCA 90 bp | TCTGGGAGAAAGAGAAGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAATTTATGGAAAGTGGTaGCCATGGTGGTCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGRKRRAGAIGGAVKEAAIYGKW*PWWSVP Trigger: AGGCACTGACCACCATGGTCACCACTTTCCATAAAT...TGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCTTCTCTTTCTCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR TCA 90 bp | GCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGGCTACCCTCTCTCCCTaGATATTTATGGAAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: AIGGAVKEAAEVRIRSCQATLSP*IFMESG Trigger: ACCACTTTCCATAAATATTCAGGGAGAGAGGGTAGC...CTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR GCA 90 bp | GAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTCCTGCTCCTTCATCTTCTCTaGAAGACTCAGCTCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: EGQLKRLQRSGSGAASVLLLHLL*KTQLCL Trigger: AAGACAGAGCTGAGTCTTGCAGAGAAGATGAAGGAG...CAGGACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR GCA 90 bp | GGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTCCTCTCCTTCATCTTCTCTaGAAGACTCAGCTCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GGAVKEAAEVRIRSCQCPLLHLL*KTQLCL Trigger: AAGACAGAGCTGAGTCTTGCAGAGAAGATGAAGGAG...AGGACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR GCA 90 bp | ATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTAGTCATTGTAGGCCATaGACAGCGTGGTCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: IGGAVKEAAEVRIRSCQCSHCRP*TAWSGT Trigger: TGTTCCTGACCACGCTGTGCATGGCCTACAATGACT...ACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CCA 90 bp | AGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGCTCCCTGAATATTTATaGAAAGTGGTGACCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: RAGAIGGAVKEAAEVRIRLPEYL*KVVTMV Trigger: CACCATGGTCACCACTTTCCATAAATATTCAGGGAG...CCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CCA 90 bp | GCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTTGAAGTCAATCTCCTaGTCGCTGTTTTTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AIGGAVKEAAEVRIRSCQLKSIS*SLFLSR Trigger: CCTGGACAAAAACAGCGACCAGGAGATTGACTTCAA...CTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CCA 90 bp | AGAAGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCTTGAAGTCAATCTCCTaGTCGCTGTTTTTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RRAGAIGGAVKEAAEVRILKSIS*SLFLSR Trigger: CCTGGACAAAAACAGCGACCAGGAGATTGACTTCAA...GATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR TCA 90 bp | TCTGGGAGAAAGAGAAGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGCTACCCTCTCTCCCTaGATATTTATGGAAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SGRKRRAGAIGGAVKEAAATLSP*IFMESG Trigger: ACCACTTTCCATAAATATTCAGGGAGAGAGGGTAGC...TGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCTTCTCTTTCTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR GCA 90 bp | AGAAGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCTCAAGTTATCAATGCTaGTCTCCTTCATCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RRAGAIGGAVKEAAEVRISSYQC*SPSSSL Trigger: CAGAGAAGATGAAGGAGAGCAGCATTGATAACTTGA...GATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR GCA 90 bp | GAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTCCTGTCAAGTTATCAATGCTaGTCTCCTTCATCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EGQLKRLQRSGSGAASVLSSYQC*SPSSSL Trigger: CAGAGAAGATGAAGGAGAGCAGCATTGATAACTTGA...CAGGACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR GCA 90 bp | AGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGTCATCAAGTTATCAATaGTGCTCTCCTTCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RAGAIGGAVKEAAEVRIRSSSYQ*CSPSSS Trigger: AGAAGATGAAGGAGAGCAGCATTGATAACTTGATGA...CCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR GCA 90 bp | GCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTCATCAAGTTATCAATaGTGCTCTCCTTCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AGAIGGAVKEAAEVRIRSSSSYQ*CSPSSS Trigger: AGAAGATGAAGGAGAGCAGCATTGATAACTTGATGA...GCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CAA 90 bp | GCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGCTACTCAGGGTCAGCTaGCTACCCTCTCTCCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: AIGGAVKEAAEVRIRSCQLLRVS*LPSLPE Trigger: TTCAGGGAGAGAGGGTAGCAAGCTGACCCTGAGTAG...CTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CAA 90 bp | TCTGGGAGAAAGAGAAGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCACTACTCAGGGTCAGCTaGCTACCCTCTCTCCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SGRKRRAGAIGGAVKEAALLRVS*LPSLPE Trigger: TTCAGGGAGAGAGGGTAGCAAGCTGACCCTGAGTAG...TGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCTTCTCTTTCTCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CAA 90 bp | GCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTCCTGGTCGCTGTTTTaGTCCAGGCTCTTCATCAAG | + |
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Preference number: 5 (lower is better) Translates to: AIGGAVKEAAEVRIRSCQSWSLF*SRLFIK Trigger: CTTGATGAAGAGCCTGGACAAAAACAGCGACCAGGA...CTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CAA 90 bp | GCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGAACACAGAGTACTCCTaGAAGTCAATCTCCTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: AIGGAVKEAAEVRIRSCQNTEYS*KSISWS Trigger: CGACCAGGAGATTGACTTCAAGGAGTACTCTGTGTT...CTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CAA 90 bp | GAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTCCTGAACACAGAGTACTCCTaGAAGTCAATCTCCTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: EGQLKRLQRSGSGAASVLNTEYS*KSISWS Trigger: CGACCAGGAGATTGACTTCAAGGAGTACTCTGTGTT...CAGGACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGCAGGGGCCATAGGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGACTCAGCTCTGTCTaGATCAACTCCTTCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RRAGAIGGAVKEAAEVRIRLSSV*INSFSS Trigger: AGAACTGAAGGAGTTGATCAAGACAGAGCTGAGTCT...GATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCCTATGGCCCCTGCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS-3UTR CAA 90 bp | GGAGGGGCAGTTAAAGAGGCTGCAGAGGTCAGGATCAGGAGCTGCCAGTGTCCTAGACTCAGCTCTGTCTaGATCAACTCCTTCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GGAVKEAAEVRIRSCQCPRLSSV*INSFSS Trigger: AGAACTGAAGGAGTTGATCAAGACAGAGCTGAGTCT...AGGACACTGGCAGCTCCTGATCCTGACCTCTGCAGCCTCTTTAACTGCCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS TCA 90 bp | CATTGTAGGCCATGCACAGCGTGGTCAGGAACACAGAGTACTCCTTaGAGTCAATCTCCTGGTCGCTGTTTTTGTCCAGGCTCTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: HCRPCTAWSGTQSTP*SQSPGRCFCPGSSS Trigger: TGATGAAGAGCCTGGACAAAAACAGCGACCAGGAGATTGACTTCAAGGAGTACTCTGTGTTCCTGACCACGCTGTGCATGGCCTACAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS CCA 90 bp | TTCCTACTCAGGGTCAGCTTGCTACCCTCTCTCCCTGAATATTTATaGAAAGTGGTGACCATGGTGGTCAGTGCCTTCTCAAGAGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: FLLRVSLLPSLPEYL*KVVTMVVSAFSRGV Trigger: GACTCCTCTTGAGAAGGCACTGACCACCATGGTCACCACTTTCCATAAATATTCAGGGAGAGAGGGTAGCAAGCTGACCCTGAGTAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS TCA 90 bp | CTTCAGTTCTTTCCTACTCAGGGTCAGCTTGCTACCCTCTCTCCCTaGATATTTATGGAAAGTGGTGACCATGGTGGTCAGTGCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LQFFPTQGQLATLSP*IFMESGDHGGQCLL Trigger: GAGAAGGCACTGACCACCATGGTCACCACTTTCCATAAATATTCAGGGAGAGAGGGTAGCAAGCTGACCCTGAGTAGGAAAGAACTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS TCA 90 bp | CAATGCTGCTCTCCTTCATCTTCTCTGCAAGACTCAGCTCTGTCTTaGTCAACTCCTTCAGTTCTTTCCTACTCAGGGTCAGCTTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: QCCSPSSSLQDSALS*STPSVLSYSGSACY Trigger: GTAGCAAGCTGACCCTGAGTAGGAAAGAACTGAAGGAGTTGATCAAGACAGAGCTGAGTCTTGCAGAGAAGATGAAGGAGAGCAGCATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS TCA 72 bp | CCATGCACAGCGTGGTCAGGAACACAGAGTACTCCTTaGAGTCAATCTCCTGGTCGCTGTTTTTGTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PCTAWSGTQSTP*SQSPGRCFCPG Trigger: GCCTGGACAAAAACAGCGACCAGGAGATTGACTTCAAGGAGTACTCTGTGTTCCTGACCACGCTGTGCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS CAA 72 bp | GCCATGCACAGCGTGGTCAGGAACACAGAGTACTCCTaGAAGTCAATCTCCTGGTCGCTGTTTTTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AMHSVVRNTEYS*KSISWSLFLSR Trigger: CCTGGACAAAAACAGCGACCAGGAGATTGACTTCAAGGAGTACTCTGTGTTCCTGACCACGCTGTGCATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS TCA 72 bp | TTTCCTACTCAGGGTCAGCTTGCTACCCTCTCTCCCTaGATATTTATGGAAAGTGGTGACCATGGTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FPTQGQLATLSP*IFMESGDHGGQ Trigger: CTGACCACCATGGTCACCACTTTCCATAAATATTCAGGGAGAGAGGGTAGCAAGCTGACCCTGAGTAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS CAA 90 bp | TCAATGCTGCTCTCCTTCATCTTCTCTGCAAGACTCAGCTCTGTCTaGATCAACTCCTTCAGTTCTTTCCTACTCAGGGTCAGCTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SMLLSFIFSARLSSV*INSFSSFLLRVSLL Trigger: TAGCAAGCTGACCCTGAGTAGGAAAGAACTGAAGGAGTTGATCAAGACAGAGCTGAGTCTTGCAGAGAAGATGAAGGAGAGCAGCATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS CAA 72 bp | CTCTCCTTCATCTTCTCTGCAAGACTCAGCTCTGTCTaGATCAACTCCTTCAGTTCTTTCCTACTCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSFIFSARLSSV*INSFSSFLLRV Trigger: GACCCTGAGTAGGAAAGAACTGAAGGAGTTGATCAAGACAGAGCTGAGTCTTGCAGAGAAGATGAAGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS CAA 90 bp | TCTGTCTTGATCAACTCCTTCAGTTCTTTCCTACTCAGGGTCAGCTaGCTACCCTCTCTCCCTGAATATTTATGGAAAGTGGTGACCATG | + |
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Preference number: 6 (lower is better) Translates to: SVLINSFSSFLLRVS*LPSLPEYLWKVVTM Trigger: CATGGTCACCACTTTCCATAAATATTCAGGGAGAGAGGGTAGCAAGCTGACCCTGAGTAGGAAAGAACTGAAGGAGTTGATCAAGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS CAA 90 bp | AGGAACACAGAGTACTCCTTGAAGTCAATCTCCTGGTCGCTGTTTTaGTCCAGGCTCTTCATCAAGTTATCAATGCTGCTCTCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: RNTEYSLKSISWSLF*SRLFIKLSMLLSFI Trigger: GATGAAGGAGAGCAGCATTGATAACTTGATGAAGAGCCTGGACAAAAACAGCGACCAGGAGATTGACTTCAAGGAGTACTCTGTGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS GCA 72 bp | CGCTGTTTTTGTCCAGGCTCTTCATCAAGTTATCAATaGTGCTCTCCTTCATCTTCTCTGCAAGACTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RCFCPGSSSSYQ*CSPSSSLQDSA Trigger: AGCTGAGTCTTGCAGAGAAGATGAAGGAGAGCAGCATTGATAACTTGATGAAGAGCCTGGACAAAAACAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS CAA 72 bp | GAGTACTCCTTGAAGTCAATCTCCTGGTCGCTGTTTTaGTCCAGGCTCTTCATCAAGTTATCAATGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: EYSLKSISWSLF*SRLFIKLSMLL Trigger: GAGCAGCATTGATAACTTGATGAAGAGCCTGGACAAAAACAGCGACCAGGAGATTGACTTCAAGGAGTACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS GCA 72 bp | TGTTTTTGTCCAGGCTCTTCATCAAGTTATCAATGCTaGTCTCCTTCATCTTCTCTGCAAGACTCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CFCPGSSSSYQC*SPSSSLQDSAL Trigger: CAGAGCTGAGTCTTGCAGAGAAGATGAAGGAGAGCAGCATTGATAACTTGATGAAGAGCCTGGACAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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| CDS CAA 72 bp | ATCAACTCCTTCAGTTCTTTCCTACTCAGGGTCAGCTaGCTACCCTCTCTCCCTGAATATTTATGGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: INSFSSFLLRVS*LPSLPEYLWKV Trigger: CACTTTCCATAAATATTCAGGGAGAGAGGGTAGCAAGCTGACCCTGAGTAGGAAAGAACTGAAGGAGTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001049.5 ENSMUST00000107329.8 |
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