Pregenerated sensors for S100A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001021Ensembl transcript IDs: ENSMUST00000001047.8, ENSMUST00000200290.5, ENSMUST00000200508.5
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGAGGAGGCCCCTGCCACAGCGGTCCCAGTTGTGTGCACATGGCTaGGCAGAGATGTTCTTCCCTTCCAAGAAGAGAAGCGGCAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LRRPLPQRSQLCAHG*AEMFFPSKKRSGKG Trigger: GCCTTTGCCGCTTCTCTTCTTGGAAGGGAAGAACATCTCTGCTCAGCCATGTGCACACAACTGGGACCGCTGTGGCAGGGGCCTCCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001047.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGACCAGACCCTGCCCTTCTaGGATAGCGTACACCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: WEGCGYTPRTTSRTKMEDQTLPF*DSVHLW Trigger: CCAAAGGTGTACGCTATCCCAGAAGGGCAGGGTCTG...GTCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| 3UTR CAA 90 bp | GGTAGCTGGGTGGGGTTAGCACATCAAGAACTTGGCAAGTCTAGATaGAAAGGGGTACCACAGAGAGAGTGGGAAGGGTGTGGCTACACA | + |
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Preference number: 2 (lower is better) Translates to: GSWVGLAHQELGKSR*KGVPQREWEGCGYT Trigger: TGTGTAGCCACACCCTTCCCACTCTCTCTGTGGTACCCCTTTCAATCTAGACTTGCCAAGTTCTTGATGTGCTAACCCCACCCAGCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001047.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCACATCAAGAACTTGGCAAGTCTAGATTGAAAGGGGTACCACAGAGAGAGCAGACCCTGCCCTTCTaGGATAGCGTACACCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LAHQELGKSRLKGVPQREQTLPF*DSVHLW Trigger: CCAAAGGTGTACGCTATCCCAGAAGGGCAGGGTCTG...CTCTCTCTGTGGTACCCCTTTCAATCTAGACTTGCCAAGTTCTTGATGTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 |
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| 3UTR CCA 72 bp | ACACCCAGGACCACCTCAAGGACAAAGATGGAGGACTaGAGCAGACCCTGCCCTTCTGGGATAGCGTACACC | + |
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Preference number: 3 (lower is better) Translates to: TPRTTSRTKMED*SRPCPSGIAYT Trigger: GGTGTACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCCCTGCCACAGCGGTCCCAGTTGTGTGCACATGGCTGAGCAGAGATGTCTTGGCAAGTCTAGATaGAAAGGGGTACCACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GGPCHSGPSCVHMAEQRCLGKSR*KGVPQR Trigger: TCTCTGTGGTACCCCTTTCAATCTAGACTTGCCAAG...ACATCTCTGCTCAGCCATGTGCACACAACTGGGACCGCTGTGGCAGGGGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001047.8 |
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| 3UTR TCA 72 bp | CCCCTGCCACAGCGGTCCCAGTTGTGTGCACATGGCTaGGCAGAGATGTTCTTCCCTTCCAAGAAGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: PLPQRSQLCAHG*AEMFFPSKKRS Trigger: GCTTCTCTTCTTGGAAGGGAAGAACATCTCTGCTCAGCCATGTGCACACAACTGGGACCGCTGTGGCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001047.8 |
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| 3UTR CCA 72 bp | ATGTTCTTCCCTTCCAAGAAGAGAAGCGGCAAAGGCTaGCTACTGTCCCACCCCTCACAAGCTAGACATCCC | + |
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Preference number: 3 (lower is better) Translates to: MFFPSKKRSGKG*LLSHPSQARHP Trigger: GGGATGTCTAGCTTGTGAGGGGTGGGACAGTAGCCAGCCTTTGCCGCTTCTCTTCTTGGAAGGGAAGAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001047.8 |
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| 3UTR CCA 72 bp | ATTGAAAGGGGTACCACAGAGAGAGTGGGAAGGGTGTaGCTACACACCCAGGACCACCTCAAGGACAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: IERGTTERVGRV*LHTQDHLKDKD Trigger: ATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTCTCTCTGTGGTACCCCTTTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 |
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| 3UTR CCA 72 bp | ACATCCCTAGGAAAGCCTCGAAAGCTCATGGGTAGCTaGGTGGGGTTAGCACATCAAGAACTTGGCAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: TSLGKPRKLMGS*VGLAHQELGKS Trigger: AGACTTGCCAAGTTCTTGATGTGCTAACCCCACCCAGCTACCCATGAGCTTTCGAGGCTTTCCTAGGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001047.8 |
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| CDS-3UTR GCA 90 bp | GTACCACAGAGAGAGTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGCACGATGGCAGCTACTaGCTGCTCCAGGGGCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: VPQREWEGCGYTPRTTSRHDGSY*LLQGPG Trigger: ACCCGGCCCCTGGAGCAGGCAGTAGCTGCCATCGTG...CCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTCTCTCTGTGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR GCA 90 bp | CACAGCGGTCCCAGTTGTGTGCACATGGCTGAGCAGAGATGTTCTTCCCTTCCACACGATGGCAGCTACTaGCTGCTCCAGGGGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSGPSCVHMAEQRCSSLPHDGSY*LLQGPG Trigger: ACCCGGCCCCTGGAGCAGGCAGTAGCTGCCATCGTG...TGGAAGGGAAGAACATCTCTGCTCAGCCATGTGCACACAACTGGGACCGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001047.8 |
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| CDS-3UTR GCA 90 bp | GAAAGGGGTACCACAGAGAGAGTGGGAAGGGTGTGGCTACACACCCAGGACCACATCCCCACAGCGCCCTaGATACTCCTGGAAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ERGTTERVGRVWLHTQDHIPTAP*ILLEGA Trigger: TGCACCTTCCAGGAGTATGCAGGGCGCTGTGGGGAT...GTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTCTCTCTGTGGTACCCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 |
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| CDS-3UTR CCA 90 bp | AGTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGCACTCGGCGTCCAGGTaGGCAGCTCCTTCTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: SGKGVATHPGPPQGQRWRHSASR*AAPSAT Trigger: TGTTGCAGAAGGAGCTGCCCACCTGGACGCCGAGTG...CCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR GCA 90 bp | TGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGACATCCCCACAGCGCCCTaGATACTCCTGGAAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: WEGCGYTPRTTSRTKMEDIPTAP*ILLEGA Trigger: TGCACCTTCCAGGAGTATGCAGGGCGCTGTGGGGAT...GTCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR GCA 90 bp | GGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGACTATCCCCACAGCGCCCTaGATACTCCTGGAAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: GKGVATHPGPPQGQRWRTIPTAP*ILLEGA Trigger: TGCACCTTCCAGGAGTATGCAGGGCGCTGTGGGGAT...AGTCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | GATGGAGGACTGGAGCAGACCCTGCCCTTCTGGGATAGCGTACACCTTTGGATCCGCCCTGCATACTCCTaGAAGGTGCACACGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGGLEQTLPFWDSVHLWIRPAYS*KVHTMA Trigger: TGCCATCGTGTGCACCTTCCAGGAGTATGCAGGGCG...GATCCAAAGGTGTACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | GTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGACGCCCTGCATACTCCTaGAAGGTGCACACGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: VGRVWLHTQDHLKDKDGGRPAYS*KVHTMA Trigger: TGCCATCGTGTGCACCTTCCAGGAGTATGCAGGGCG...TCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGACACTCGGCGTCCAGGTaGGCAGCTCCTTCTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: RESGKGVATHPGPPQGQRHSASR*AAPSAT Trigger: TGTTGCAGAAGGAGCTGCCCACCTGGACGCCGAGTG...TCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | AAAGATGGAGGACTGGAGCAGACCCTGCCCTTCTGGGATAGCGTACACCTTTGGCACTCGGCGTCCAGGTaGGCAGCTCCTTCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDGGLEQTLPFWDSVHLWHSASR*AAPSAT Trigger: TGTTGCAGAAGGAGCTGCCCACCTGGACGCCGAGTG...CCAAAGGTGTACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTCCATCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR GCA 90 bp | GAGTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGTGGGCAGCTCCTTCTaGAACAACTCCTTGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EWEGCGYTPRTTSRTKMEVGSSF*NNSLSS Trigger: GGAGCTCAAGGAGTTGTTGCAGAAGGAGCTGCCCAC...CTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR GCA 90 bp | GGAGGACTGGAGCAGACCCTGCCCTTCTGGGATAGCGTACACCTTTGGATCAGAGTGGGCAGCTCCTTCTaGAACAACTCCTTGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GGLEQTLPFWDSVHLWIRVGSSF*NNSLSS Trigger: GGAGCTCAAGGAGTTGTTGCAGAAGGAGCTGCCCAC...TCTGATCCAAAGGTGTACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | CACAGCGGTCCCAGTTGTGTGCACATGGCTGAGCAGAGATGTTCTTCCCTTCCAGGAAGGTGCACACGATaGCAGCTACTGCCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HSGPSCVHMAEQRCSSLPGRCTR*QLLPAP Trigger: TGGAGCAGGCAGTAGCTGCCATCGTGTGCACCTTCC...TGGAAGGGAAGAACATCTCTGCTCAGCCATGTGCACACAACTGGGACCGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001047.8 |
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| CDS-3UTR CCA 90 bp | AAGGACAAAGATGGAGGACTGGAGCAGACCCTGCCCTTCTGGGATAGCGTACACGGAAGGTGCACACGATaGCAGCTACTGCCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KDKDGGLEQTLPFWDSVHGRCTR*QLLPAP Trigger: TGGAGCAGGCAGTAGCTGCCATCGTGTGCACCTTCC...GTGTACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTCCATCTTTGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGAGGAAGGTGCACACGATaGCAGCTACTGCCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RESGKGVATHPGPPQGQRGRCTR*QLLPAP Trigger: TGGAGCAGGCAGTAGCTGCCATCGTGTGCACCTTCC...TCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | GTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGAAGTAGAGACAGAGGCTaGCAAGTGAGCGCACGTACT | + |
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Preference number: 4 (lower is better) Translates to: VGRVWLHTQDHLKDKDGGSRDRG*QVSART Trigger: AGTACGTGCGCTCACTTGCCAGCCTCTGTCTCTACT...TCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | CTCAAGGACAAAGATGGAGGACTGGAGCAGACCCTGCCCTTCTGGGATAGCGTAAGTAGAGACAGAGGCTaGCAAGTGAGCGCACGTACT | + |
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Preference number: 4 (lower is better) Translates to: LKDKDGGLEQTLPFWDSVSRDRG*QVSART Trigger: AGTACGTGCGCTCACTTGCCAGCCTCTGTCTCTACT...TACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTCCATCTTTGTCCTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | TGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGACTCCTTGAGCTCCGACTaGCAGATCTTGTATTTATCC | + |
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Preference number: 4 (lower is better) Translates to: WEGCGYTPRTTSRTKMEDSLSSD*QILYLS Trigger: GGATAAATACAAGATCTGCCAGTCGGAGCTCAAGGA...GTCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | GAGGACTGGAGCAGACCCTGCCCTTCTGGGATAGCGTACACCTTTGGATCAGAGTCCTTGAGCTCCGACTaGCAGATCTTGTATTTATCC | + |
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Preference number: 4 (lower is better) Translates to: EDWSRPCPSGIAYTFGSESLSSD*QILYLS Trigger: GGATAAATACAAGATCTGCCAGTCGGAGCTCAAGGA...CTCTGATCCAAAGGTGTACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CCA 90 bp | AAGATGGAGGACTGGAGCAGACCCTGCCCTTCTGGGATAGCGTACACCTTTGGATCCTTGAGCTCCGACTaGCAGATCTTGTATTTATCC | + |
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Preference number: 4 (lower is better) Translates to: KMEDWSRPCPSGIAYTFGSLSSD*QILYLS Trigger: GGATAAATACAAGATCTGCCAGTCGGAGCTCAAGGA...TCCAAAGGTGTACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTCCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR GCA 90 bp | GGGTTAGCACATCAAGAACTTGGCAAGTCTAGATTGAAAGGGGTACCACAGAGAGTGGGCAGCTCCTTCTaGAACAACTCCTTGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLAHQELGKSRLKGVPQRVGSSF*NNSLSS Trigger: GGAGCTCAAGGAGTTGTTGCAGAAGGAGCTGCCCAC...TCTCTGTGGTACCCCTTTCAATCTAGACTTGCCAAGTTCTTGATGTGCTAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 |
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| 3UTR CAA 72 bp | GTGGGGTTAGCACATCAAGAACTTGGCAAGTCTAGATaGAAAGGGGTACCACAGAGAGAGTGGGAAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VGLAHQELGKSR*KGVPQREWEGC Trigger: ACACCCTTCCCACTCTCTCTGTGGTACCCCTTTCAATCTAGACTTGCCAAGTTCTTGATGTGCTAACCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 |
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| CDS-3UTR CCA 90 bp | TTAGCACATCAAGAACTTGGCAAGTCTAGATTGAAAGGGGTACCACAGAGAGAGAGTAGAGACAGAGGCTaGCAAGTGAGCGCACGTACT | + |
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Preference number: 4 (lower is better) Translates to: LAHQELGKSRLKGVPQRESRDRG*QVSART Trigger: AGTACGTGCGCTCACTTGCCAGCCTCTGTCTCTACT...CTCTCTCTGTGGTACCCCTTTCAATCTAGACTTGCCAAGTTCTTGATGTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 |
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| CDS GCA 90 bp | CTTGAGCTCCGACTGGCAGATCTTGTATTTATCCCCACAGCGCCCTaGATACTCCTGGAAGGTGCACACGATGGCAGCTACTGCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LELRLADLVFIPTAP*ILLEGAHDGSYCLL Trigger: GAGCAGGCAGTAGCTGCCATCGTGTGCACCTTCCAGGAGTATGCAGGGCGCTGTGGGGATAAATACAAGATCTGCCAGTCGGAGCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CAA 90 bp | CACAGAGAGAGTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAATCCGACTGGCAGATCTaGTATTTATCCCCACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: HRESGKGVATHPGPPQGQSDWQI*YLSPQR Trigger: GCGCTGTGGGGATAAATACAAGATCTGCCAGTCGGA...TTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTCTCTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CAA 90 bp | GAGAGTGGGAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGTCCGACTGGCAGATCTaGTATTTATCCCCACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: ESGKGVATHPGPPQGQRWSDWQI*YLSPQR Trigger: GCGCTGTGGGGATAAATACAAGATCTGCCAGTCGGA...CCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CAA 90 bp | CTCAAGGACAAAGATGGAGGACTGGAGCAGACCCTGCCCTTCTGGGATAGCGTATCCGACTGGCAGATCTaGTATTTATCCCCACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: LKDKDGGLEQTLPFWDSVSDWQI*YLSPQR Trigger: GCGCTGTGGGGATAAATACAAGATCTGCCAGTCGGA...TACGCTATCCCAGAAGGGCAGGGTCTGCTCCAGTCCTCCATCTTTGTCCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CAA 90 bp | GAAAGGGGTACCACAGAGAGAGTGGGAAGGGTGTGGCTACACACCCAGGACCACTCCACTTCGCAGTCTTaGTTGGTATCCAGAACACTC | + |
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Preference number: 5 (lower is better) Translates to: ERGTTERVGRVWLHTQDHSTSQS*LVSRTL Trigger: GAGTGTTCTGGATACCAACAAAGACTGCGAAGTGGA...GTGGTCCTGGGTGTGTAGCCACACCCTTCCCACTCTCTCTGTGGTACCCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 |
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| CDS-3UTR CAA 90 bp | GGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGACTGGAGCAGACCCTCCACTTCGCAGTCTTaGTTGGTATCCAGAACACTC | + |
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Preference number: 5 (lower is better) Translates to: GYTPRTTSRTKMEDWSRPSTSQS*LVSRTL Trigger: GAGTGTTCTGGATACCAACAAAGACTGCGAAGTGGA...GGGTCTGCTCCAGTCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CAA 90 bp | CTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGACTGGAGCAGACCCTGTCCACTTCGCAGTCTTaGTTGGTATCCAGAACACTC | + |
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Preference number: 5 (lower is better) Translates to: LHTQDHLKDKDGGLEQTLSTSQS*LVSRTL Trigger: GAGTGTTCTGGATACCAACAAAGACTGCGAAGTGGA...CAGGGTCTGCTCCAGTCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CAA 90 bp | GAAGGGTGTGGCTACACACCCAGGACCACCTCAAGGACAAAGATGGAGGACTGGACTTCGCAGTCTTTGTaGGTATCCAGAACACTCATG | + |
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Preference number: 5 (lower is better) Translates to: EGCGYTPRTTSRTKMEDWTSQSL*VSRTLM Trigger: CATGAGTGTTCTGGATACCAACAAAGACTGCGAAGT...CCAGTCCTCCATCTTTGTCCTTGAGGTGGTCCTGGGTGTGTAGCCACACCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS TCA 90 bp | CCCCAAAGTCCACTTCGCAGTCTTTGTTGGTATCCAGAACACTCATaGATTTATTGTAGTCACACTCCCGGAACTCACTCGGCGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PQSPLRSLCWYPEHS*IYCSHTPGTHSASR Trigger: CCTGGACGCCGAGTGAGTTCCGGGAGTGTGACTACAATAAATTCATGAGTGTTCTGGATACCAACAAAGACTGCGAAGTGGACTTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS-3UTR CAA 90 bp | CAAGAACTTGGCAAGTCTAGATTGAAAGGGGTACCACAGAGAGAGTGGGAAGGGACTTCGCAGTCTTTGTaGGTATCCAGAACACTCATG | + |
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Preference number: 5 (lower is better) Translates to: QELGKSRLKGVPQREWEGTSQSL*VSRTLM Trigger: CATGAGTGTTCTGGATACCAACAAAGACTGCGAAGT...CCCTTCCCACTCTCTCTGTGGTACCCCTTTCAATCTAGACTTGCCAAGTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 |
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| CDS TCA 72 bp | GAAGTACTCGTGGCAGTAGAGACAGAGGCTGGCAAGTaGGCGCACGTACTCCCCAAAGTCCACTTCGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: EVLVAVETEAGK*AHVLPKVHFAV Trigger: GACTGCGAAGTGGACTTTGGGGAGTACGTGCGCTCACTTGCCAGCCTCTGTCTCTACTGCCACGAGTACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS CAA 90 bp | GGCAGCTCCTTCTGCAACAACTCCTTGAGCTCCGACTGGCAGATCTaGTATTTATCCCCACAGCGCCCTGCATACTCCTGGAAGGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GSSFCNNSLSSDWQI*YLSPQRPAYSWKVH Trigger: GTGCACCTTCCAGGAGTATGCAGGGCGCTGTGGGGATAAATACAAGATCTGCCAGTCGGAGCTCAAGGAGTTGTTGCAGAAGGAGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS GCA 72 bp | CGACTGGCAGATCTTGTATTTATCCCCACAGCGCCCTaGATACTCCTGGAAGGTGCACACGATGGCAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: RLADLVFIPTAP*ILLEGAHDGSY Trigger: GTAGCTGCCATCGTGTGCACCTTCCAGGAGTATGCAGGGCGCTGTGGGGATAAATACAAGATCTGCCAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS CCA 72 bp | ATCTTGTATTTATCCCCACAGCGCCCTGCATACTCCTaGAAGGTGCACACGATGGCAGCTACTGCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ILYLSPQRPAYS*KVHTMAATACS Trigger: GGAGCAGGCAGTAGCTGCCATCGTGTGCACCTTCCAGGAGTATGCAGGGCGCTGTGGGGATAAATACAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS CAA 72 bp | TTCTGCAACAACTCCTTGAGCTCCGACTGGCAGATCTaGTATTTATCCCCACAGCGCCCTGCATACTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FCNNSLSSDWQI*YLSPQRPAYSW Trigger: CCAGGAGTATGCAGGGCGCTGTGGGGATAAATACAAGATCTGCCAGTCGGAGCTCAAGGAGTTGTTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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| CDS TCA 72 bp | CCACTTCGCAGTCTTTGTTGGTATCCAGAACACTCATaGATTTATTGTAGTCACACTCCCGGAACTCACTCG | + |
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Preference number: 6 (lower is better) Translates to: PLRSLCWYPEHS*IYCSHTPGTHS Trigger: CGAGTGAGTTCCGGGAGTGTGACTACAATAAATTCATGAGTGTTCTGGATACCAACAAAGACTGCGAAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001047.8 ENSMUST00000200290.5 ENSMUST00000200508.5 |
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