Pregenerated sensors for S100A2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094018

Ensembl transcript IDs: ENSMUST00000179550.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATAGCAGAATCCACCAGAACCAGGGCATACATCCGGAAGTCCACCTaGTGGTCACTGTCCTTATCGAGGTTGTTCATTTCCTTCTTCACC	+
Preference number: 5 (lower is better) Translates to: IAESTRTRAYIRKST*WSLSLSRLFISFFT Trigger: GGTGAAGAAGGAAATGAACAACCTCGATAAGGACAGTGACCAGCAGGTGGACTTCCGGATGTATGCCCTGGTTCTGGTGGATTCTGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179550.2
CDS CCA 90 bp	AGAGAGTTGTTTCAACCAAGAGATCCACGGCAGGTAGTGGAGCGCTaGGGACCCCTCAAGGAAGTTATTAAACCAGATAGCAGAATCCAC	+
Preference number: 5 (lower is better) Translates to: RELFQPRDPRQVVER*GPLKEVIKPDSRIH Trigger: GTGGATTCTGCTATCTGGTTTAATAACTTCCTTGAGGGGTCCCCAGCGCTCCACTACCTGCCGTGGATCTCTTGGTTGAAACAACTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179550.2
CDS TCA 90 bp	GCAGCTCCTTACGCAAAAGCTCCTTTATCTCCCCTTTGTTGTGTTTaGGCCTCTCGTCCTCTTGACTGGCGTACTTGTGGAAGGTATAGA	+
Preference number: 5 (lower is better) Translates to: AAPYAKAPLSPLCCV*ASRPLDWRTCGRYR Trigger: TCTATACCTTCCACAAGTACGCCAGTCAAGAGGACGAGAGGCTCAAACACAACAAAGGGGAGATAAAGGAGCTTTTGCGTAAGGAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179550.2
CDS GCA 72 bp	TCCACCAGAACCAGGGCATACATCCGGAAGTCCACCTaGTGGTCACTGTCCTTATCGAGGTTGTTCATTTCC	+
Preference number: 6 (lower is better) Translates to: STRTRAYIRKST*WSLSLSRLFIS Trigger: GGAAATGAACAACCTCGATAAGGACAGTGACCAGCAGGTGGACTTCCGGATGTATGCCCTGGTTCTGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179550.2
CDS CCA 72 bp	ACCAGAACCAGGGCATACATCCGGAAGTCCACCTGCTaGTCACTGTCCTTATCGAGGTTGTTCATTTCCTTC	+
Preference number: 6 (lower is better) Translates to: TRTRAYIRKSTC*SLSLSRLFISF Trigger: GAAGGAAATGAACAACCTCGATAAGGACAGTGACCAGCAGGTGGACTTCCGGATGTATGCCCTGGTTCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179550.2
CDS CCA 72 bp	TTTCAACCAAGAGATCCACGGCAGGTAGTGGAGCGCTaGGGACCCCTCAAGGAAGTTATTAAACCAGATAGC	+
Preference number: 6 (lower is better) Translates to: FQPRDPRQVVER*GPLKEVIKPDS Trigger: GCTATCTGGTTTAATAACTTCCTTGAGGGGTCCCCAGCGCTCCACTACCTGCCGTGGATCTCTTGGTTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179550.2
CDS CAA 90 bp	GCATACATCCGGAAGTCCACCTGCTGGTCACTGTCCTTATCGAGGTaGTTCATTTCCTTCTTCACCTTCTCATCATCTACGTTATCCCCC	+
Preference number: 6 (lower is better) Translates to: AYIRKSTCWSLSLSR*FISFFTFSSSTLSP Trigger: GGGGGATAACGTAGATGATGAGAAGGTGAAGAAGGAAATGAACAACCTCGATAAGGACAGTGACCAGCAGGTGGACTTCCGGATGTATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179550.2
CDS TCA 72 bp	TACGCAAAAGCTCCTTTATCTCCCCTTTGTTGTGTTTaGGCCTCTCGTCCTCTTGACTGGCGTACTTGTGGA	+
Preference number: 6 (lower is better) Translates to: YAKAPLSPLCCV*ASRPLDWRTCG Trigger: TCCACAAGTACGCCAGTCAAGAGGACGAGAGGCTCAAACACAACAAAGGGGAGATAAAGGAGCTTTTGCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179550.2

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