Pregenerated sensors for S100A16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074457Ensembl transcript IDs: ENSMUST00000098910.3, ENSMUST00000098911.10, ENSMUST00000107331.8, ENSMUST00000107333.8, ENSMUST00000107334.8, ENSMUST00000107335.2, ENSMUST00000150833.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACTACCACAGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTaGTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: STTTVALIAPDPPIL*CSARVGTGLEGEGR Trigger: CCTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGTGGTAGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR CCA 90 bp | CTGGACAGGAGCCCCTGGGAATGCCTCTCTACCCGGCTAAGAGGTTaGGAGGAAAAGAAGCGGCTAATTCTGGTACTGCCACTACCACAG | + |
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Preference number: 1 (lower is better) Translates to: LDRSPWECLSTRLRG*EEKKRLILVLPLPQ Trigger: CTGTGGTAGTGGCAGTACCAGAATTAGCCGCTTCTTTTCCTCCCAACCTCTTAGCCGGGTAGAGAGGCATTCCCAGGGGCTCCTGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| 3UTR CAA 90 bp | GGAAGCACTACCACAGTGGCCTTGATAGCCCCCGACCCACCCATCTaGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GSTTTVALIAPDPPI*CCSARVGTGLEGEG Trigger: CCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGTGGTAGTGCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGCATGGAAAGAACACTaGCAGGACATGGGTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: APDPPILCCSARVGTGLEAWKEH*QDMGQD Trigger: GTCCTGACCCATGTCCTGCCAGTGTTCTTTCCATGC...CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR CAA 90 bp | GCTGGACAGGAGCCCCTGGGAATGCCTCTCTACCCGGCTAAGAGGTaGGGAGGAAAAGAAGCGGCTAATTCTGGTACTGCCACTACCACA | + |
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Preference number: 2 (lower is better) Translates to: AGQEPLGMPLYPAKR*GGKEAANSGTATTT Trigger: TGTGGTAGTGGCAGTACCAGAATTAGCCGCTTCTTTTCCTCCCAACCTCTTAGCCGGGTAGAGAGGCATTCCCAGGGGCTCCTGTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGGCATGGAAAGAACACTaGCAGGACATGGGTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SGLDSPRPTHLVLFSKGRAWKEH*QDMGQD Trigger: GTCCTGACCCATGTCCTGCCAGTGTTCTTTCCATGC...CCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | GGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGATAGCCCCCGACCCAGCATGGAAAGAACACTaGCAGGACATGGGTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GLNAQGSTTTVALIAPDPAWKEH*QDMGQD Trigger: GTCCTGACCCATGTCCTGCCAGTGTTCTTTCCATGC...TGGGTCGGGGGCTATCAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGGCATGGAAAGAACACTaGCAGGACATGGGTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PPILCCSARVGTGLEGEGAWKEH*QDMGQD Trigger: GTCCTGACCCATGTCCTGCCAGTGTTCTTTCCATGC...CCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGGGCATGGAAAGAACACTaGCAGGACATGGGTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TALIFHKGDPLPGPTGSRAWKEH*QDMGQD Trigger: GTCCTGACCCATGTCCTGCCAGTGTTCTTTCCATGC...CCTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGAGTCAACTTAAAGCATaGAAAGAACACTGGCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: APDPPILCCSARVGTGLESQLKA*KEHWQD Trigger: GTCCTGCCAGTGTTCTTTCCATGCTTTAAGTTGACT...CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAGTCAACTTAAAGCATaGAAAGAACACTGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SGLDSPRPTHLVLFSKGRSQLKA*KEHWQD Trigger: GTCCTGCCAGTGTTCTTTCCATGCTTTAAGTTGACT...CCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | CGTTTATTTCGGTGGCAGAGCAGAGAGGAGGCTCAACCCAGGTTAGATCATTCCACCCGGCTAAGAGGTTaGGAGGAAAAGAAGCGGCTA | + |
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Preference number: 2 (lower is better) Translates to: RLFRWQSREEAQPRLDHSTRLRG*EEKKRL Trigger: TAGCCGCTTCTTTTCCTCCCAACCTCTTAGCCGGGT...GGAATGATCTAACCTGGGTTGAGCCTCCTCTCTGCTCTGCCACCGAAATAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| 3UTR-3UTR GCA 90 bp | CAACCCAGGTTAGATCATTCCCAGACAGAGACAGCTGGACAGGAGCCCCTGGGAATTAGACAGGAACATTaGGAGAGCACACAGACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: QPRLDHSQTETAGQEPLGIRQEH*ESTQTQ Trigger: TTGAGTCTGTGTGCTCTCGCAATGTTCCTGTCTAAT...TCCCAGGGGCTCCTGTCCAGCTGTCTCTGTCTGGGAATGATCTAACCTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| 3UTR-3UTR CCA 90 bp | CCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGGAGTCAACTTAAAGCATaGAAAGAACACTGGCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PILCCSARVGTGLEGEGRSQLKA*KEHWQD Trigger: GTCCTGCCAGTGTTCTTTCCATGCTTTAAGTTGACT...CCTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTACAGGATCCAGGGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGAGTCAACTTAAAGCATaGAAAGAACACTGGCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: AYRIQGLNAQGSTTTVALSQLKA*KEHWQD Trigger: GTCCTGCCAGTGTTCTTTCCATGCTTTAAGTTGACT...CAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCCCTGGATCCTGTAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGAGTCAACTTAAAGCATaGAAAGAACACTGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: NSIDISQRGPPPRAYRIQSQLKA*KEHWQD Trigger: GTCCTGCCAGTGTTCTTTCCATGCTTTAAGTTGACT...CTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR TCA 90 bp | AGACCCAGAATCAGTCAAGAATTAGACAGGAACATTGCGAGAGCACACAGACTCGGCCCCAAACAGCATTaGTATTTCACAAAGGGGACC | + |
|
Preference number: 2 (lower is better) Translates to: RPRISQELDRNIARAHRLGPKQH*YFTKGT Trigger: GGTCCCCTTTGTGAAATATCAATGCTGTTTGGGGCC...GAGTCTGTGTGCTCTCGCAATGTTCCTGTCTAATTCTTGACTGATTCTGGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGCTCACCTCTAGAGGTCAGGACAGACCCAGAATCAGTCAAGAATTAGACAGTCAACTTAAAGCATaGAAAGAACACTGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SKLTSRGQDRPRISQELDSQLKA*KEHWQD Trigger: GTCCTGCCAGTGTTCTTTCCATGCTTTAAGTTGACT...GTCTAATTCTTGACTGATTCTGGGTCTGTCCTGACCTCTAGAGGTGAGCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
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| 3UTR GCA 72 bp | CCCAGACAGAGACAGCTGGACAGGAGCCCCTGGGAATaGCTCTCTACCCGGCTAAGAGGTTGGGAGGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: PRQRQLDRSPWE*LSTRLRGWEEK Trigger: CTTTTCCTCCCAACCTCTTAGCCGGGTAGAGAGGCATTCCCAGGGGCTCCTGTCCAGCTGTCTCTGTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| 3UTR GCA 72 bp | ACCCCCTCCCAGGGCCTACAGGATCCAGGGATTGAATaGTCAGGGAAGCACTACCACAGTGGCCTTGATAGC | + |
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Preference number: 3 (lower is better) Translates to: TPSQGLQDPGIE*SGKHYHSGLDS Trigger: GCTATCAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCCCTGGATCCTGTAGGCCCTGGGAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGAGAGGAGGCTCAACCCAGGTTAGATCATTCCCAGACAGAGACAGCTGGATACAGGATCCAGGGATaGAATGCTCAGGGAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: SREEAQPRLDHSQTETAGYRIQG*NAQGST Trigger: AGTGCTTCCCTGAGCATTCAATCCCTGGATCCTGTA...TCCAGCTGTCTCTGTCTGGGAATGATCTAACCTGGGTTGAGCCTCCTCTCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| 3UTR-3UTR CAA 90 bp | CAAGCAGCAAGCTCACCTCTAGAGGTCAGGACAGACCCAGAATCAGTCAAGAATTACAGGATCCAGGGATaGAATGCTCAGGGAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: QAASSPLEVRTDPESVKNYRIQG*NAQGST Trigger: AGTGCTTCCCTGAGCATTCAATCCCTGGATCCTGTA...ATTCTTGACTGATTCTGGGTCTGTCCTGACCTCTAGAGGTGAGCTTGCTGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCAAGCTCACCTCTAGAGGTCAGGACAGACCCAGAATCAGTCAAGAATTAGGGCCCCAAACAGCATaGATATTTCACAAAGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: SSKLTSRGQDRPRISQELGPQTA*IFHKGD Trigger: GTCCCCTTTGTGAAATATCAATGCTGTTTGGGGCCC...TAATTCTTGACTGATTCTGGGTCTGTCCTGACCTCTAGAGGTGAGCTTGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGAATCAGTCAAGAATTAGACAGGAACATTGCGAGAGCACACAGACTCAACGGGCCCCAAACAGCATaGATATTTCACAAAGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: PRISQELDRNIARAHRLNGPQTA*IFHKGD Trigger: GTCCCCTTTGTGAAATATCAATGCTGTTTGGGGCCC...GTTGAGTCTGTGTGCTCTCGCAATGTTCCTGTCTAATTCTTGACTGATTCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| 3UTR GCA 72 bp | CAGACCCAGAATCAGTCAAGAATTAGACAGGAACATTaGGAGAGCACACAGACTCAACAAGTGAGAGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: QTQNQSRIRQEH*ESTQTQQVREV Trigger: GACTTCTCTCACTTGTTGAGTCTGTGTGCTCTCGCAATGTTCCTGTCTAATTCTTGACTGATTCTGGGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | GCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGTCCTGCTGGCACTCCTaGTGGCTCTCCTGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: APDPPILCCSARVGTGLESCWHS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGTGCCAGCAGGA...CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | GCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGTGCTGGCTCTCCTGCTaGCACTCCTGCTGGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: APDPPILCCSARVGTGLECWLSC*HSCWLS Trigger: GGAGAGCCAGCAGGAGTGCCAGCAGGAGAGCCAGCA...CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | GGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACTCCTGCTGGCACTCCTaGTGGCTCTCCTGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GLDSPRPTHLVLFSKGRNSCWHS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGTGCCAGCAGGA...GTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | CCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGATCCTGCTGGCTCTCCTaGTGGCTCTCCTGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PDPPILCCSARVGTGLEGSCWLS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGAGCCAGCAGGA...TCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | GGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACTGCTGGCTCTCCTGCTaGCACTCCTGCTGGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLDSPRPTHLVLFSKGRNCWLSC*HSCWLS Trigger: GGAGAGCCAGCAGGAGTGCCAGCAGGAGAGCCAGCA...GTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | TTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGGGATTGAATGCTCATCCTGCTGGCACTCCTaGTGGCTCTCCTGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: FTKGTPSQGLQDPGIECSSCWHS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGTGCCAGCAGGA...TGAGCATTCAATCCCTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTATCCTGCTGGCTCTCCTaGTGGCTCTCCTGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TVALIAPDPPILCCSARVSCWLS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGAGCCAGCAGGA...TACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | AGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGTGCTGGCTCTCCTGCTaGCACTCCTGTTGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: SGLDSPRPTHLVLFSKGRCWLSC*HSCWRM Trigger: CATCCGCCAACAGGAGTGCCAGCAGGAGAGCCAGCA...CCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | GGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACTGCTGGCTCTCCTGCTaGCACTCCTGTTGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: GLDSPRPTHLVLFSKGRNCWLSC*HSCWRM Trigger: CATCCGCCAACAGGAGTGCCAGCAGGAGAGCCAGCA...GTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | CCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGGTGCTGGCTCTCCTGCTaGCACTCCTGCTGGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PILCCSARVGTGLEGEGRCWLSC*HSCWLS Trigger: GGAGAGCCAGCAGGAGTGCCAGCAGGAGAGCCAGCA...CCTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | GCCTACAGGATCCAGGGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGTCCTGCTGGCACTCCTaGTGGCTCTCCTGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AYRIQGLNAQGSTTTVALSCWHS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGTGCCAGCAGGA...CAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCCCTGGATCCTGTAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | TTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTTCCTGCTGGCACTCCTaGTGGCTCTCCTGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LIAPDPPILCCSARVGTGSCWHS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGTGCCAGCAGGA...ACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | TTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGGGATTGAATGCTCACAGATGCGCCCGTCGTaGTTGGCATCCAGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FTKGTPSQGLQDPGIECSQMRPS*LASRFW Trigger: CCAGAACCTGGATGCCAACCACGACGGGCGCATCTG...TGAGCATTCAATCCCTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | CCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGGCAGATGCGCCCGTCGTaGTTGGCATCCAGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PILCCSARVGTGLEGEGRQMRPS*LASRFW Trigger: CCAGAACCTGGATGCCAACCACGACGGGCGCATCTG...CCTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTATGCTGGCTCTCCTGCTaGCACTCCTGTTGGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TVALIAPDPPILCCSARVCWLSC*HSCWRM Trigger: CATCCGCCAACAGGAGTGCCAGCAGGAGAGCCAGCA...TACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGGTGCTGGCTCTCCTGCTaGCACTCCTGTTGGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PILCCSARVGTGLEGEGRCWLSC*HSCWRM Trigger: CATCCGCCAACAGGAGTGCCAGCAGGAGAGCCAGCA...CCTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | TTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTTGCTGGCTCTCCTGCTaGCACTCCTGCTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIAPDPPILCCSARVGTGCWLSC*HSCWLS Trigger: GGAGAGCCAGCAGGAGTGCCAGCAGGAGAGCCAGCA...ACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGATGAGCTTGTCAGCTaGCTTTCGGTTCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: APDPPILCCSARVGTGLEDELVS*LSVPCV Trigger: GACACAGGGAACCGAAAGGCAGCTGACAAGCTCATC...CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGAGGAGGCTCAACCCAGGTTAGATCATTCCCAGACAGAGACAGCTGGATCCTGCTGGCTCTCCTaGTGGCTCTCCTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SREEAQPRLDHSQTETAGSCWLS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGAGCCAGCAGGA...TCCAGCTGTCTCTGTCTGGGAATGATCTAACCTGGGTTGAGCCTCCTCTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
||
| CDS-3UTR GCA 90 bp | CAAACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCTCCTGCTGGCTCTCCTaGTGGCTCTCCTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTALIFHKGDPLPGPTGSSCWLS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGAGCCAGCAGGA...GGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | CCAAACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCTCCTGCTGGCTCTCCTaGTGGCTCTCCTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNSIDISQRGPPPRAYRISCWLS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGAGCCAGCAGGA...GATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGGGATTGAATGCTCAGGGGTGTCCGTCAGCATGTaGTTCAACTCTCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKGTPSQGLQDPGIECSGVSVSM*FNSLWS Trigger: GCTCCAGAGAGAGTTGAACCACATGCTGACGGACAC...CCCTGAGCATTCAATCCCTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGTGTCCGTCAGCATGTaGTTCAACTCTCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: APDPPILCCSARVGTGLEVSVSM*FNSLWS Trigger: GCTCCAGAGAGAGTTGAACCACATGCTGACGGACAC...CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | ACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGCAGATGCGCCCGTCGTaGTTGGCATCCAGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: THLVLFSKGRNRSGGRREQMRPS*LASRFW Trigger: CCAGAACCTGGATGCCAACCACGACGGGCGCATCTG...CTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | TTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCAGATGCGCCCGTCGTaGTTGGCATCCAGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIAPDPPILCCSARVGTGQMRPS*LASRFW Trigger: CCAGAACCTGGATGCCAACCACGACGGGCGCATCTG...ACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGAGAGGAGGCTCAACCCAGGTTAGATCATTCCCAGACAGAGACAGCTGGTGCTGGCTCTCCTGCTaGCACTCCTGTTGGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EQRGGSTQVRSFPDRDSWCWLSC*HSCWRM Trigger: CATCCGCCAACAGGAGTGCCAGCAGGAGAGCCAGCA...CCAGCTGTCTCTGTCTGGGAATGATCTAACCTGGGTTGAGCCTCCTCTCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
||
| CDS-3UTR CCA 90 bp | AACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGTGCTGGCTCTCCTGCTaGCACTCCTGCTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSIDISQRGPPPRAYRIQCWLSC*HSCWLS Trigger: GGAGAGCCAGCAGGAGTGCCAGCAGGAGAGCCAGCA...CTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| 3UTR CAA 72 bp | ACCACAGTGGCCTTGATAGCCCCCGACCCACCCATCTaGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTVALIAPDPPI*CCSARVGTGLE Trigger: CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGGATGAGCTTGTCAGCTaGCTTTCGGTTCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLDSPRPTHLVLFSKGRDELVS*LSVPCV Trigger: GACACAGGGAACCGAAAGGCAGCTGACAAGCTCATC...CCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | CCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGATGAGCTTGTCAGCTaGCTTTCGGTTCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PDPPILCCSARVGTGLEGDELVS*LSVPCV Trigger: GACACAGGGAACCGAAAGGCAGCTGACAAGCTCATC...TCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | CGTTTATTTCGGTGGCAGAGCAGAGAGGAGGCTCAACCCAGGTTAGATCATTCCTCCTGCTGGCACTCCTaGTGGCTCTCCTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLFRWQSREEAQPRLDHSSCWHS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGTGCCAGCAGGA...GGAATGATCTAACCTGGGTTGAGCCTCCTCTCTGCTCTGCCACCGAAATAAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| CDS-3UTR CCA 90 bp | CCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGATTGGCATCCAGGTTCTaGATGAGCTTGTCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PDPPILCCSARVGTGLEGLASRF*MSLSAA Trigger: GGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAA...TCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | CAAACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCCAGATGCGCCCGTCGTaGTTGGCATCCAGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTALIFHKGDPLPGPTGSQMRPS*LASRFW Trigger: CCAGAACCTGGATGCCAACCACGACGGGCGCATCTG...GGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGCAGATGCGCCCGTCGTaGTTGGCATCCAGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSIDISQRGPPPRAYRIQQMRPS*LASRFW Trigger: CCAGAACCTGGATGCCAACCACGACGGGCGCATCTG...CTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | CCAAACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCTGCTGGCTCTCCTGCTaGCACTCCTGTTGGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PNSIDISQRGPPPRAYRICWLSC*HSCWRM Trigger: CATCCGCCAACAGGAGTGCCAGCAGGAGAGCCAGCA...GATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | CTCTCTACCCGGCTAAGAGGTTGGGAGGAAAAGAAGCGGCTAATTCTGGTACTGTGCTGGCTCTCCTGCTaGCACTCCTGCTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTRLRGWEEKKRLILVLCWLSC*HSCWLS Trigger: GGAGAGCCAGCAGGAGTGCCAGCAGGAGAGCCAGCA...CAGTACCAGAATTAGCCGCTTCTTTTCCTCCCAACCTCTTAGCCGGGTAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| 3UTR CAA 72 bp | GAGCCCCTGGGAATGCCTCTCTACCCGGCTAAGAGGTaGGGAGGAAAAGAAGCGGCTAATTCTGGTACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPLGMPLYPAKR*GGKEAANSGTA Trigger: GGCAGTACCAGAATTAGCCGCTTCTTTTCCTCCCAACCTCTTAGCCGGGTAGAGAGGCATTCCCAGGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| CDS-3UTR CCA 90 bp | ACAGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGTGTCCGTCAGCATGTaGTTCAACTCTCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVALIAPDPPILCCSARVVSVSM*FNSLWS Trigger: GCTCCAGAGAGAGTTGAACCACATGCTGACGGACAC...TACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | ACAGTCAGGAGCTGGGAGACCTCAAGCAGCAAGCTCACCTCTAGAGGTCAGGACTTGGCATCCAGGTTCTaGATGAGCTTGTCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVRSWETSSSKLTSRGQDLASRF*MSLSAA Trigger: GGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAA...GTCCTGACCTCTAGAGGTGAGCTTGCTGCTTGAGGTCTCCCAGCTCCTGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
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| CDS-3UTR CCA 90 bp | CGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGATTGGCATCCAGGTTCTaGATGAGCTTGTCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPTHLVLFSKGRNRSGGRLASRF*MSLSAA Trigger: GGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAA...TCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | CCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGACACCAGGACAACAACTaGCTTCTCCAGCTCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PDPPILCCSARVGTGLEGHQDNN*LLQLCI Trigger: TATACAGAGCTGGAGAAGGCAGTTGTTGTCCTGGTG...TCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | TTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTGATGAGCTTGTCAGCTaGCTTTCGGTTCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIAPDPPILCCSARVGTGDELVS*LSVPCV Trigger: GACACAGGGAACCGAAAGGCAGCTGACAAGCTCATC...ACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | ACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGGATGAGCTTGTCAGCTaGCTTTCGGTTCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: THLVLFSKGRNRSGGRREDELVS*LSVPCV Trigger: GACACAGGGAACCGAAAGGCAGCTGACAAGCTCATC...CTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | ACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGTTGGCATCCAGGTTCTaGATGAGCTTGTCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: THLVLFSKGRNRSGGRRELASRF*MSLSAA Trigger: GGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAA...CTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | GCCTACAGGATCCAGGGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGTTGGCATCCAGGTTCTaGATGAGCTTGTCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AYRIQGLNAQGSTTTVALLASRF*MSLSAA Trigger: GGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAA...CAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCCCTGGATCCTGTAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGGCACCAGGACAACAACTaGCTTCTCCAGCTCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PILCCSARVGTGLEGEGRHQDNN*LLQLCI Trigger: TATACAGAGCTGGAGAAGGCAGTTGTTGTCCTGGTG...CCTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | CCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGCACCAGGACAACAACTaGCTTCTCCAGCTCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PPILCCSARVGTGLEGEGHQDNN*LLQLCI Trigger: TATACAGAGCTGGAGAAGGCAGTTGTTGTCCTGGTG...CCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCAGGACAGACCCAGAATCAGTCAAGAATTAGACAGGAACATTGCGAGATCCTGCTGGCTCTCCTaGTGGCTCTCCTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGQDRPRISQELDRNIARSCWLS*WLSCWH Trigger: GTGCCAGCAGGAGAGCCAGCAGGAGAGCCAGCAGGA...TCTCGCAATGTTCCTGTCTAATTCTTGACTGATTCTGGGTCTGTCCTGACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | CCAAACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCGTGTCCGTCAGCATGTaGTTCAACTCTCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNSIDISQRGPPPRAYRIVSVSM*FNSLWS Trigger: GCTCCAGAGAGAGTTGAACCACATGCTGACGGACAC...GATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CCA 90 bp | GAGACCTCAAGCAGCAAGCTCACCTCTAGAGGTCAGGACAGACCCAGAATCAGTTTGGCATCCAGGTTCTaGATGAGCTTGTCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETSSSKLTSRGQDRPRISLASRF*MSLSAA Trigger: GGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAA...ACTGATTCTGGGTCTGTCCTGACCTCTAGAGGTGAGCTTGCTGCTTGAGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | TTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCACCAGGACAACAACTaGCTTCTCCAGCTCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LIAPDPPILCCSARVGTGHQDNN*LLQLCI Trigger: TATACAGAGCTGGAGAAGGCAGTTGTTGTCCTGGTG...ACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGAGGAGGCTCAACCCAGGTTAGATCATTCCCAGACAGAGACAGCTGGACACCAGGACAACAACTaGCTTCTCCAGCTCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: SREEAQPRLDHSQTETAGHQDNN*LLQLCI Trigger: TATACAGAGCTGGAGAAGGCAGTTGTTGTCCTGGTG...TCCAGCTGTCTCTGTCTGGGAATGATCTAACCTGGGTTGAGCCTCCTCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
||
| CDS-3UTR CCA 90 bp | TCAAGCAGCAAGCTCACCTCTAGAGGTCAGGACAGACCCAGAATCAGTCAAGAAGTGTCCGTCAGCATGTaGTTCAACTCTCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSKLTSRGQDRPRISQEVSVSM*FNSLWS Trigger: GCTCCAGAGAGAGTTGAACCACATGCTGACGGACAC...TTCTTGACTGATTCTGGGTCTGTCCTGACCTCTAGAGGTGAGCTTGCTGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
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| CDS-3UTR GCA 90 bp | AGACCCAGAATCAGTCAAGAATTAGACAGGAACATTGCGAGAGCACACAGACTCGATGAGCTTGTCAGCTaGCTTTCGGTTCCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPRISQELDRNIARAHRLDELVS*LSVPCV Trigger: GACACAGGGAACCGAAAGGCAGCTGACAAGCTCATC...GAGTCTGTGTGCTCTCGCAATGTTCCTGTCTAATTCTTGACTGATTCTGGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CCA 90 bp | CTCTCCTGCTGGCACTCCTGCTGGCTCTCCTGCTGGCACTCCTGTTaGCGGATGAGGTTGGCCATGGGGCTGGTGATTCCACCAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSCWHSCWLSCWHSC*RMRLAMGLVIPPIM Trigger: CATGATTGGTGGAATCACCAGCCCCATGGCCAACCTCATCCGCCAACAGGAGTGCCAGCAGGAGAGCCAGCAGGAGTGCCAGCAGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGGGATTGAATGCTCAGGGATGCGCCCGTCGTGGTaGGCATCCAGGTTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TKGTPSQGLQDPGIECSGMRPSW*ASRFWM Trigger: CATCCAGAACCTGGATGCCAACCACGACGGGCGCAT...CCCTGAGCATTCAATCCCTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAATGCGCCCGTCGTGGTaGGCATCCAGGTTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TVALIAPDPPILCCSARVMRPSW*ASRFWM Trigger: CATCCAGAACCTGGATGCCAACCACGACGGGCGCAT...TACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS TCA 90 bp | CGTCAAAGCAGATGCGCCCGTCGTGGTTGGCATCCAGGTTCTGGATaGGCTTGTCAGCTGCCTTTCGGTTCCCTGTGTCCGTCAGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: RQSRCARRGWHPGSG*ACQLPFGSLCPSAC Trigger: ACATGCTGACGGACACAGGGAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGCATCTGCTTTGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS GCA 90 bp | GCGCCCGTCGTGGTTGGCATCCAGGTTCTGGATGAGCTTGTCAGCTaGCTTTCGGTTCCCTGTGTCCGTCAGCATGTGGTTCAACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: APVVVGIQVLDELVS*LSVPCVRQHVVQLS Trigger: AGAGAGTTGAACCACATGCTGACGGACACAGGGAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGAGGTTCTGGATGAGCTaGTCAGCTGCCTTTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: APDPPILCCSARVGTGLERFWMS*SAAFRF Trigger: GAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCT...CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | ACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGGATGCGCCCGTCGTGGTaGGCATCCAGGTTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TALIFHKGDPLPGPTGSRMRPSW*ASRFWM Trigger: CATCCAGAACCTGGATGCCAACCACGACGGGCGCAT...CCTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | TTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTATGCGCCCGTCGTGGTaGGCATCCAGGTTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LIAPDPPILCCSARVGTGMRPSW*ASRFWM Trigger: CATCCAGAACCTGGATGCCAACCACGACGGGCGCAT...ACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CCA 90 bp | TATTCGTCAAAGCAGATGCGCCCGTCGTGGTTGGCATCCAGGTTCTaGATGAGCTTGTCAGCTGCCTTTCGGTTCCCTGTGTCCGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YSSKQMRPSWLASRF*MSLSAAFRFPVSVS Trigger: GCTGACGGACACAGGGAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGCATCTGCTTTGACGAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGATGCGCCCGTCGTGGTaGGCATCCAGGTTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSIDISQRGPPPRAYRIQMRPSW*ASRFWM Trigger: CATCCAGAACCTGGATGCCAACCACGACGGGCGCAT...CTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | CCAAACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCATGCGCCCGTCGTGGTaGGCATCCAGGTTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PNSIDISQRGPPPRAYRIMRPSW*ASRFWM Trigger: CATCCAGAACCTGGATGCCAACCACGACGGGCGCAT...GATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CCA 90 bp | CCACCAATCATGGTCCAGTATTCGTCAAAGCAGATGCGCCCGTCGTaGTTGGCATCCAGGTTCTGGATGAGCTTGTCAGCTGCCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PPIMVQYSSKQMRPS*LASRFWMSLSAAFR Trigger: CCGAAAGGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGCATCTGCTTTGACGAATACTGGACCATGATTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | GGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGATAGCCCCCGACCCAAGGTTCTGGATGAGCTaGTCAGCTGCCTTTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLNAQGSTTTVALIAPDPRFWMS*SAAFRF Trigger: GAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCT...TGGGTCGGGGGCTATCAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | GCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGTTGCTGATCTTGTTTTaGACCAGGCTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: APDPPILCCSARVGTGLELLILF*TRLCLD Trigger: ATCCAAGCACAGCCTGGTCAAAAACAAGATCAGCAA...CTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | ACAGTCAGGAGCTGGGAGACCTCAAGCAGCAAGCTCACCTCTAGAGGTCAGGACCTGGACTTGCTGATCTaGTTTTTGACCAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVRSWETSSSKLTSRGQDLDLLI*FLTRLC Trigger: GCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAG...GTCCTGACCTCTAGAGGTGAGCTTGCTGCTTGAGGTCTCCCAGCTCCTGACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | TTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCCAGGGATTGAATGCTCACTGGACTTGCTGATCTaGTTTTTGACCAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FTKGTPSQGLQDPGIECSLDLLI*FLTRLC Trigger: GCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAG...TGAGCATTCAATCCCTGGATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGGCCTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTACTGGACTTGCTGATCTaGTTTTTGACCAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVALIAPDPPILCCSARVLDLLI*FLTRLC Trigger: GCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAG...TACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | CCAGGGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGATAGCCCCCGACTGGACTTGCTGATCTaGTTTTTGACCAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGIECSGKHYHSGLDSPRLDLLI*FLTRLC Trigger: GCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAG...TCGGGGGCTATCAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | TCGGTGGCAGAGCAGAGAGGAGGCTCAACCCAGGTTAGATCATTCCCAGACAGAAGGTTCTGGATGAGCTaGTCAGCTGCCTTTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVAEQRGGSTQVRSFPDRRFWMS*SAAFRF Trigger: GAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCT...TCTGTCTGGGAATGATCTAACCTGGGTTGAGCCTCCTCTCTGCTCTGCCACCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
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| CDS-3UTR CAA 90 bp | TTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTAGGTTCTGGATGAGCTaGTCAGCTGCCTTTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LIAPDPPILCCSARVGTGRFWMS*SAAFRF Trigger: GAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCT...ACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | ACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGAGGTTCTGGATGAGCTaGTCAGCTGCCTTTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: THLVLFSKGRNRSGGRRERFWMS*SAAFRF Trigger: GAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCT...CTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | GGGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGATAGCCCCCGACCCTTGCTGATCTTGTTTTaGACCAGGCTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GIECSGKHYHSGLDSPRPLLILF*TRLCLD Trigger: ATCCAAGCACAGCCTGGTCAAAAACAAGATCAGCAA...GGGTCGGGGGCTATCAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | TTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGACTTGCTGATCTaGTTTTTGACCAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LIAPDPPILCCSARVGTGLDLLI*FLTRLC Trigger: GCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAG...ACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | GGGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGATAGCCCCCGACCCTTTCGGAAGCTGGACTaGCTGATCTTGTTTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GIECSGKHYHSGLDSPRPFRKLD*LILFLT Trigger: GGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAA...GGGTCGGGGGCTATCAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | CCAAACAGCATTGATATTTCACAAAGGGGACCCCCTCCCAGGGCCTACAGGATCAGGTTCTGGATGAGCTaGTCAGCTGCCTTTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNSIDISQRGPPPRAYRIRFWMS*SAAFRF Trigger: GAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCT...GATCCTGTAGGCCCTGGGAGGGGGTCCCCTTTGTGAAATATCAATGCTGTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | GGATTGAATGCTCAGGGAAGCACTACCACAGTGGCCTTGATAGCCCCCGACCCATTGCTGATCTTGTTTTaGACCAGGCTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLNAQGSTTTVALIAPDPLLILF*TRLCLD Trigger: ATCCAAGCACAGCCTGGTCAAAAACAAGATCAGCAA...TGGGTCGGGGGCTATCAAGGCCACTGTGGTAGTGCTTCCCTGAGCATTCAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | CCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGTTTCGGAAGCTGGACTaGCTGATCTTGTTTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: PPILCCSARVGTGLEGEGFRKLD*LILFLT Trigger: GGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAA...CCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS-3UTR CAA 90 bp | CTTGATAGCCCCCGACCCACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTTTCGGAAGCTGGACTaGCTGATCTTGTTTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LDSPRPTHLVLFSKGRNRFRKLD*LILFLT Trigger: GGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAA...CCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CCA 90 bp | GCCTTTCGGTTCCCTGTGTCCGTCAGCATGTGGTTCAACTCTCTCTaGAGCATCTTTCGGAAGCTGGACTTGCTGATCTTGTTTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: AFRFPVSVSMWFNSL*SIFRKLDLLILFLT Trigger: GGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAAGATGCTCCAGAGAGAGTTGAACCACATGCTGACGGACACAGGGAACCGAAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 ENSMUST00000150833.8 |
||
| CDS-3UTR CAA 90 bp | ACCCATCTTGTGCTGTTCAGCAAGGGTAGGAACAGGTCTGGAGGGAGAAGGGAGTTTCGGAAGCTGGACTaGCTGATCTTGTTTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: THLVLFSKGRNRSGGRREFRKLD*LILFLT Trigger: GGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAA...CTCCCTTCTCCCTCCAGACCTGTTCCTACCCTTGCTGAACAGCACAAGATGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGAGGCTCAACCCAGGTTAGATCATTCCCAGACAGAGACAGCTGGACAGTTGCTGATCTTGTTTTaGACCAGGCTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: REEAQPRLDHSQTETAGQLLILF*TRLCLD Trigger: ATCCAAGCACAGCCTGGTCAAAAACAAGATCAGCAA...CTGTCCAGCTGTCTCTGTCTGGGAATGATCTAACCTGGGTTGAGCCTCCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
||
| CDS-3UTR CAA 90 bp | GAGACCTCAAGCAGCAAGCTCACCTCTAGAGGTCAGGACAGACCCAGAATCAGTTTTCGGAAGCTGGACTaGCTGATCTTGTTTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ETSSSKLTSRGQDRPRISFRKLD*LILFLT Trigger: GGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAA...ACTGATTCTGGGTCTGTCCTGACCTCTAGAGGTGAGCTTGCTGCTTGAGGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAAATTCAACGTTTATTTCGGTGGCAGAGCAGAGAGGAGGCTCAACCCAGGTTTCGGAAGCTGGACTaGCTGATCTTGTTTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LQIQRLFRWQSREEAQPRFRKLD*LILFLT Trigger: GGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAA...CCTGGGTTGAGCCTCCTCTCTGCTCTGCCACCGAAATAAACGTTGAATTTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 |
||
| CDS-3UTR CAA 90 bp | CCCAGAATCAGTCAAGAATTAGACAGGAACATTGCGAGAGCACACAGACTCAACCTGGACTTGCTGATCTaGTTTTTGACCAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRISQELDRNIARAHRLNLDLLI*FLTRLC Trigger: GCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAG...GTTGAGTCTGTGTGCTCTCGCAATGTTCCTGTCTAATTCTTGACTGATTCTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGAATCAGTCAAGAATTAGACAGGAACATTGCGAGAGCACACAGACTCAACTTGCTGATCTTGTTTTaGACCAGGCTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PRISQELDRNIARAHRLNLLILF*TRLCLD Trigger: ATCCAAGCACAGCCTGGTCAAAAACAAGATCAGCAA...GTTGAGTCTGTGTGCTCTCGCAATGTTCCTGTCTAATTCTTGACTGATTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107334.8 ENSMUST00000107335.2 |
||
| CDS CAA 90 bp | GCTCTCCTGCTGGCACTCCTGCTGGCTCTCCTGCTGGCACTCCTGTaGGCGGATGAGGTTGGCCATGGGGCTGGTGATTCCACCAATCAT | + |
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Preference number: 6 (lower is better) Translates to: ALLLALLLALLLALL*ADEVGHGAGDSTNH Trigger: ATGATTGGTGGAATCACCAGCCCCATGGCCAACCTCATCCGCCAACAGGAGTGCCAGCAGGAGAGCCAGCAGGAGTGCCAGCAGGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CAA 72 bp | TGGCTCTCCTGCTGGCACTCCTGTTGGCGGATGAGGTaGGCCATGGGGCTGGTGATTCCACCAATCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: WLSCWHSCWRMR*AMGLVIPPIMV Trigger: GACCATGATTGGTGGAATCACCAGCCCCATGGCCAACCTCATCCGCCAACAGGAGTGCCAGCAGGAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CAA 90 bp | AAGCAGATGCGCCCGTCGTGGTTGGCATCCAGGTTCTGGATGAGCTaGTCAGCTGCCTTTCGGTTCCCTGTGTCCGTCAGCATGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: KQMRPSWLASRFWMS*SAAFRFPVSVSMWF Trigger: GAACCACATGCTGACGGACACAGGGAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGCATCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CCA 72 bp | AAGCAGATGCGCCCGTCGTGGTTGGCATCCAGGTTCTaGATGAGCTTGTCAGCTGCCTTTCGGTTCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: KQMRPSWLASRF*MSLSAAFRFPV Trigger: CACAGGGAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGCATCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CAA 72 bp | GTCCAGTATTCGTCAAAGCAGATGCGCCCGTCGTGGTaGGCATCCAGGTTCTGGATGAGCTTGTCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VQYSSKQMRPSW*ASRFWMSLSAA Trigger: GGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGCATCTGCTTTGACGAATACTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS GCA 72 bp | GTGGTTGGCATCCAGGTTCTGGATGAGCTTGTCAGCTaGCTTTCGGTTCCCTGTGTCCGTCAGCATGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VVGIQVLDELVS*LSVPCVRQHVV Trigger: AACCACATGCTGACGGACACAGGGAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 ENSMUST00000150833.8 |
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| CDS CAA 90 bp | CCAATCATGGTCCAGTATTCGTCAAAGCAGATGCGCCCGTCGTGGTaGGCATCCAGGTTCTGGATGAGCTTGTCAGCTGCCTTTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PIMVQYSSKQMRPSW*ASRFWMSLSAAFRF Trigger: GAACCGAAAGGCAGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGCATCTGCTTTGACGAATACTGGACCATGATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CCA 72 bp | ATGGTCCAGTATTCGTCAAAGCAGATGCGCCCGTCGTaGTTGGCATCCAGGTTCTGGATGAGCTTGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: MVQYSSKQMRPS*LASRFWMSLSA Trigger: AGCTGACAAGCTCATCCAGAACCTGGATGCCAACCACGACGGGCGCATCTGCTTTGACGAATACTGGACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 |
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| CDS CCA 72 bp | TTCCCTGTGTCCGTCAGCATGTGGTTCAACTCTCTCTaGAGCATCTTTCGGAAGCTGGACTTGCTGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: FPVSVSMWFNSL*SIFRKLDLLIL Trigger: CAAGATCAGCAAGTCCAGCTTCCGAAAGATGCTCCAGAGAGAGTTGAACCACATGCTGACGGACACAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 ENSMUST00000150833.8 |
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| CDS CAA 72 bp | TTCAACTCTCTCTGGAGCATCTTTCGGAAGCTGGACTaGCTGATCTTGTTTTTGACCAGGCTGTGCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: FNSLWSIFRKLD*LILFLTRLCLD Trigger: ATCCAAGCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAAGATGCTCCAGAGAGAGTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 ENSMUST00000150833.8 |
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| CDS CAA 90 bp | AGCATGTGGTTCAACTCTCTCTGGAGCATCTTTCGGAAGCTGGACTaGCTGATCTTGTTTTTGACCAGGCTGTGCTTGGATACATATTTA | + |
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Preference number: 6 (lower is better) Translates to: SMWFNSLWSIFRKLD*LILFLTRLCLDTYL Trigger: TAAATATGTATCCAAGCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAAGATGCTCCAGAGAGAGTTGAACCACATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 ENSMUST00000150833.8 |
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| CDS CAA 72 bp | CTCTGGAGCATCTTTCGGAAGCTGGACTTGCTGATCTaGTTTTTGACCAGGCTGTGCTTGGATACATATTTA | + |
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Preference number: 6 (lower is better) Translates to: LWSIFRKLDLLI*FLTRLCLDTYL Trigger: TAAATATGTATCCAAGCACAGCCTGGTCAAAAACAAGATCAGCAAGTCCAGCTTCCGAAAGATGCTCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000098910.3 ENSMUST00000098911.10 ENSMUST00000107331.8 ENSMUST00000107333.8 ENSMUST00000107334.8 ENSMUST00000107335.2 ENSMUST00000150833.8 |
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