Pregenerated sensors for S100A14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042306Ensembl transcript IDs: ENSMUST00000164481.7, ENSMUST00000167598.6, ENSMUST00000199538.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTTTCAGGACCAAATATGCAGCCAGATTCCCATCCCTGCTCTTTaGATCACTTCCATAACCCAGTTCCTTTCTGCCCTTCCCCTACTA | + |
|
Preference number: 1 (lower is better) Translates to: PFQDQICSQIPIPAL*ITSITQFLSALPLL Trigger: TAGTAGGGGAAGGGCAGAAAGGAACTGGGTTATGGAAGTGATCCAAAGAGCAGGGATGGGAATCTGGCTGCATATTTGGTCCTGAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTCCTCTCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCAGACCCAGGAGCTCCATaGAGCCCACAGGGAAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LVLSPQSDEVMPSSASFADPGAP*SPQGSL Trigger: CAGGCTTCCCTGTGGGCTCCATGGAGCTCCTGGGTC...TGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGAGAGGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR TCA 90 bp | TCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCAACTCTGCTCCCCCCTGAGCTCCCTTaGGATGAGGACTTCTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: SPQSDEVMPSSASFATLLPPELP*DEDFWT Trigger: GGTCCAGAAGTCCTCATCTCAAGGGAGCTCAGGGGG...GAGCAGAGTTGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTTGGCCCTTACCCTTCCAGGATCCCTGCATATCCTCTCCAGCCCCAACCCCCTGAACGTGAACATTaGAGCAATGAGGAGAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLGPYPSRIPAYPLQPQPPEREH*SNEERC Trigger: GCACCTCTCCTCATTGCTGCAATGTTCACGTTCAGG...GGGTTGGGGCTGGAGAGGATATGCAGGGATCCTGGAAGGGTAAGGGCCAAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAGCTGGAAGCAGCAAGGATAGCACAGGGCAGACAACTACAGTTTAGGTGGCCCTTCCAGGATCCCTaGATATCCTCTCCAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: AELEAARIAQGRQLQFRWPFQDP*ISSPAP Trigger: TGGGGCTGGAGAGGATATGCAGGGATCCTGGAAGGG...CCACCTAAACTGTAGTTGTCTGCCCTGTGCTATCCTTGCTGCTTCCAGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR GCA 90 bp | GGTTCTCAGACACCCTTTTCAGGACCAAATATGCAGCCAGATTCCCATCCCTGCCCCCTACTACCAAATTaGTTGGCCCTTACCCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GSQTPFSGPNMQPDSHPCPLLPN*LALTLP Trigger: TGGAAGGGTAAGGGCCAAGCAATTTGGTAGTAGGGG...GCAGGGATGGGAATCTGGCTGCATATTTGGTCCTGAAAAGGGTGTCTGAGAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR CCA 90 bp | TCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCAACTCTGCTCCCCATCCCTGCTCTTTaGATCACTTCCATAACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SPQSDEVMPSSASFATLLPIPAL*ITSITQ Trigger: CTGGGTTATGGAAGTGATCCAAAGAGCAGGGATGGG...GAGCAGAGTTGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR CAA 90 bp | CCCTTTTCAGGACCAAATATGCAGCCAGATTCCCATCCCTGCTCTTaGGATCACTTCCATAACCCAGTTCCTTTCTGCCCTTCCCCTACT | + |
|
Preference number: 2 (lower is better) Translates to: PFSGPNMQPDSHPCS*DHFHNPVPFCPSPT Trigger: AGTAGGGGAAGGGCAGAAAGGAACTGGGTTATGGAAGTGATCCAAAGAGCAGGGATGGGAATCTGGCTGCATATTTGGTCCTGAAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTCCTCTCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCATACTACCAAATTGCTTaGCCCTTACCCTTCCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LVLSPQSDEVMPSSASFAYYQIA*PLPFQD Trigger: ATCCTGGAAGGGTAAGGGCCAAGCAATTTGGTAGTA...TGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGAGAGGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR GCA 90 bp | CAAATATGCAGCCAGATTCCCATCCCTGCTCTTTGGATCACTTCCATAACCCAGCCTGAACGTGAACATTaGAGCAATGAGGAGAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: QICSQIPIPALWITSITQPEREH*SNEERC Trigger: GCACCTCTCCTCATTGCTGCAATGTTCACGTTCAGG...CTGGGTTATGGAAGTGATCCAAAGAGCAGGGATGGGAATCTGGCTGCATATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR GCA 90 bp | TCTCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCAACTCTGCTTTCAGGACCAAATATaGAGCCAGATTCCCATCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SHPKVMKSCPPQPLLQLCFQDQI*SQIPIP Trigger: AGGGATGGGAATCTGGCTGCATATTTGGTCCTGAAA...GCAGAGTTGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR GCA 72 bp | GGAGCCCACAGGGAAGCCTGTCCTGAACGTGAACATTaGAGCAATGAGGAGAGGTGCAGGCTGGGGAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GAHREACPEREH*SNEERCRLGKG Trigger: CCCCTTCCCCAGCCTGCACCTCTCCTCATTGCTGCAATGTTCACGTTCAGGACAGGCTTCCCTGTGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCAACTCTGCAGGGGGTGGTGGGCATaGAGGGTTTTATTTCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SHPKVMKSCPPQPLLQLCRGWWA*RVLFPV Trigger: CACTGGAAATAAAACCCTCAATGCCCACCACCCCCT...GCAGAGTTGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCAACTCTGCCTACTACCAAATTGCTaGGCCCTTACCCTTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SHPKVMKSCPPQPLLQLCLLPNC*ALTLPG Trigger: TCCTGGAAGGGTAAGGGCCAAGCAATTTGGTAGTAG...GCAGAGTTGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR CCA 72 bp | AGTTCCTTTCTGCCCTTCCCCTACTACCAAATTGCTTaGCCCTTACCCTTCCAGGATCCCTGCATATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSFLPFPYYQIA*PLPFQDPCISS Trigger: AGAGGATATGCAGGGATCCTGGAAGGGTAAGGGCCAAGCAATTTGGTAGTAGGGGAAGGGCAGAAAGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGCAAGGATAGCACAGGGCAGACAACTACAGTTTAGGTGGGACAAGATTAGGGGGTGGTGGGCATaGAGGGTTTTATTTCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: EAARIAQGRQLQFRWDKIRGWWA*RVLFPV Trigger: CACTGGAAATAAAACCCTCAATGCCCACCACCCCCT...AATCTTGTCCCACCTAAACTGTAGTTGTCTGCCCTGTGCTATCCTTGCTGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGCAAGGATAGCACAGGGCAGACAACTACAGTTTAGGTGGGACAAGATTTCCCCTACTACCAAATaGCTTGGCCCTTACCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EAARIAQGRQLQFRWDKISPTTK*LGPYPS Trigger: GGAAGGGTAAGGGCCAAGCAATTTGGTAGTAGGGGA...AATCTTGTCCCACCTAAACTGTAGTTGTCTGCCCTGTGCTATCCTTGCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| 3UTR CCA 72 bp | GACCAAATATGCAGCCAGATTCCCATCCCTGCTCTTTaGATCACTTCCATAACCCAGTTCCTTTCTGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DQICSQIPIPAL*ITSITQFLSAL Trigger: AAGGGCAGAAAGGAACTGGGTTATGGAAGTGATCCAAAGAGCAGGGATGGGAATCTGGCTGCATATTTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR GCA 90 bp | TTGCTTGGCCCTTACCCTTCCAGGATCCCTGCATATCCTCTCCAGCCCCAACCCATGAGGTGTGGCAGCTaGTGGGTAACCAGGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGPYPSRIPAYPLQPQPMRCGS*WVTRSR Trigger: TCGAGACCTGGTTACCCAGCAGCTGCCACACCTCAT...GGGTTGGGGCTGGAGAGGATATGCAGGGATCCTGGAAGGGTAAGGGCCAAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTTACCCTTCCAGGATCCCTGCATATCCTCTCCAGCCCCAACCCACCCAGTTGCTCTCAGCATTaGCTGACCGACACTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LALTLPGSLHILSSPNPPSCSQH*LTDTVP Trigger: TGGGACAGTGTCGGTCAGCCAATGCTGAGAGCAACT...GGGTGGGTTGGGGCTGGAGAGGATATGCAGGGATCCTGGAAGGGTAAGGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164481.7 |
||
| CDS-3UTR CCA 90 bp | GCCCCAACCCACCCCCTGAGCTCCCTTGAGATGAGGACTTCTGGACCCAGGAGCTACAGTTGCCCAGGTTaGCAATTTTCTCTTCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: APTHPLSSLEMRTSGPRSYSCPG*QFSLLT Trigger: GGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTA...GCTCCTGGGTCCAGAAGTCCTCATCTCAAGGGAGCTCAGGGGGTGGGTTGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR GCA 90 bp | CTGAACGTGAACATTGCAGCAATGAGGAGAGGTGCAGGCTGGGGAAGGGGGTGGCTTCACACTCTTGGCTaGTTCTCCAATCAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNVNIAAMRRGAGWGRGWLHTLG*FSNQLP Trigger: TGGGAGTTGATTGGAGAAGCAGCCAAGAGTGTGAAG...CCACCCCCTTCCCCAGCCTGCACCTCTCCTCATTGCTGCAATGTTCACGTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGCAAGGATAGCACAGGGCAGACAACTACAGTTTAGGTGGGACAAGATTGCTCGGCATGAGGTGTaGCAGCTGCTGGGTAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAARIAQGRQLQFRWDKIARHEV*QLLGNQ Trigger: CTGGTTACCCAGCAGCTGCCACACCTCATGCCGAGC...AATCTTGTCCCACCTAAACTGTAGTTGTCTGCCCTGTGCTATCCTTGCTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| 3UTR CAA 72 bp | CCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTaGCAACTCTGCTCCTATTTCCCCTGCCCCTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKVMKSCPPQPL*QLCSYFPCPYS Trigger: TGAGTAGGGGCAGGGGAAATAGGAGCAGAGTTGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR CCA 90 bp | CAAATATGCAGCCAGATTCCCATCCCTGCTCTTTGGATCACTTCCATAACCCAGGGGCATCCTCAGCATTaGCTGACCGACACTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QICSQIPIPALWITSITQGHPQH*LTDTVP Trigger: TGGGACAGTGTCGGTCAGCCAATGCTGAGGATGCCC...CTGGGTTATGGAAGTGATCCAAAGAGCAGGGATGGGAATCTGGCTGCATATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| CDS-3UTR GCA 90 bp | CTGGTCCTCTCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCACTTCACACTCTTGGCTaGTTCTCCAATCAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLSPQSDEVMPSSASFALHTLG*FSNQLP Trigger: TGGGAGTTGATTGGAGAAGCAGCCAAGAGTGTGAAG...TGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGAGAGGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR CCA 90 bp | TTGCTTGGCCCTTACCCTTCCAGGATCCCTGCATATCCTCTCCAGCCCCAACCCGCCACAGAGTATTTATaGAAGTTCTTGATGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGPYPSRIPAYPLQPQPATEYL*KFLMSV Trigger: GACACTCATCAAGAACTTCCATAAATACTCTGTGGC...GGGTTGGGGCTGGAGAGGATATGCAGGGATCCTGGAAGGGTAAGGGCCAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| 3UTR CAA 72 bp | GGACCAAATATGCAGCCAGATTCCCATCCCTGCTCTTaGGATCACTTCCATAACCCAGTTCCTTTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPNMQPDSHPCS*DHFHNPVPFCP Trigger: AGGGCAGAAAGGAACTGGGTTATGGAAGTGATCCAAAGAGCAGGGATGGGAATCTGGCTGCATATTTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR TCA 90 bp | TCAGACACCCTTTTCAGGACCAAATATGCAGCCAGATTCCCATCCCTGCTCTTTCCCTCTCTACATCACTaGATTCTTGGGCATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDTLFRTKYAARFPSLLFPSLHH*ILGHPQ Trigger: CTGAGGATGCCCAAGAATTCAGTGATGTAGAGAGGG...AAAGAGCAGGGATGGGAATCTGGCTGCATATTTGGTCCTGAAAAGGGTGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCTGGAAGCAGCAAGGATAGCACAGGGCAGACAACTACAGTTTAGGTGGTCGAGTCATTACAGTTaGCCAGGTTGGCAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AELEAARIAQGRQLQFRWSSHYS*PGWQFS Trigger: AGAAAATTGCCAACCTGGGCAACTGTAATGACTCGA...CCACCTAAACTGTAGTTGTCTGCCCTGTGCTATCCTTGCTGCTTCCAGCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR CCA 90 bp | CTCTCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCAACTCTGTACAGTTGCCCAGGTTaGCAATTTTCTCTTCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSPQSDEVMPSSASFATLYSCPG*QFSLLT Trigger: GGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTA...CAGAGTTGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCAAATATGCAGCCAGATTCCCATCCCTGCTCTTTGGATCACTTCCATACATCACTGAATTCTTaGGCATCCTCAGCATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGPNMQPDSHPCSLDHFHTSLNS*ASSALA Trigger: AGCCAATGCTGAGGATGCCCAAGAATTCAGTGATGT...ATGGAAGTGATCCAAAGAGCAGGGATGGGAATCTGGCTGCATATTTGGTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| CDS-3UTR GCA 90 bp | CAAATATGCAGCCAGATTCCCATCCCTGCTCTTTGGATCACTTCCATAACCCAGTCGAGTCATTACAGTTaGCCAGGTTGGCAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QICSQIPIPALWITSITQSSHYS*PGWQFS Trigger: AGAAAATTGCCAACCTGGGCAACTGTAATGACTCGA...CTGGGTTATGGAAGTGATCCAAAGAGCAGGGATGGGAATCTGGCTGCATATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCTGGAAGCAGCAAGGATAGCACAGGGCAGACAACTACAGTTTAGGTGGTGGGCATCCTCAGCATaGGCTGACCGACACTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AELEAARIAQGRQLQFRWWASSA*ADRHCP Trigger: GGGACAGTGTCGGTCAGCCAATGCTGAGGATGCCCA...CCACCTAAACTGTAGTTGTCTGCCCTGTGCTATCCTTGCTGCTTCCAGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCTCTCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCACAGTTGCTCTCAGCATaGGCTGACCGACACTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVLSPQSDEVMPSSASFAQLLSA*ADRHCP Trigger: GGGACAGTGTCGGTCAGCCAATGCTGAGAGCAACTG...TGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGAGAGGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164481.7 |
||
| CDS-3UTR CAA 90 bp | CATGGAGCCCACAGGGAAGCCTGTCCTGAACGTGAACATTGCAGCAATGAGGAGTCTTCTAACCCACAGTaGCTCGGCATGAGGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGAHREACPEREHCSNEESSNPQ*LGMRCG Trigger: GCCACACCTCATGCCGAGCAACTGTGGGTTAGAAGA...CTCCTCATTGCTGCAATGTTCACGTTCAGGACAGGCTTCCCTGTGGGCTCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| CDS-3UTR CAA 90 bp | TCAGACACCCTTTTCAGGACCAAATATGCAGCCAGATTCCCATCCCTGCTCTTTTCTTCTAACCCACAGTaGCTCTCAGCATTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SDTLFRTKYAARFPSLLFSSNPQ*LSALAD Trigger: GTCAGCCAATGCTGAGAGCAACTGTGGGTTAGAAGA...AAAGAGCAGGGATGGGAATCTGGCTGCATATTTGGTCCTGAAAAGGGTGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164481.7 |
||
| CDS-3UTR CAA 90 bp | CTACTACCAAATTGCTTGGCCCTTACCCTTCCAGGATCCCTGCATATCCTCTCCTTCGAGTCATTACAGTaGCCCAGGTTGGCAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPNCLALTLPGSLHILSFESLQ*PRLAIF Trigger: GAAAATTGCCAACCTGGGCAACTGTAATGACTCGAA...GGAGAGGATATGCAGGGATCCTGGAAGGGTAAGGGCCAAGCAATTTGGTAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS-3UTR CAA 90 bp | CATGGAGCCCACAGGGAAGCCTGTCCTGAACGTGAACATTGCAGCAATGAGGAGTATTTATGGAAGTTCTaGATGAGTGTCTCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGAHREACPEREHCSNEEYLWKF*MSVSMA Trigger: GGCCATTGAGACACTCATCAAGAACTTCCATAAATA...CTCCTCATTGCTGCAATGTTCACGTTCAGGACAGGCTTCCCTGTGGGCTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167598.6 |
||
| CDS GCA 90 bp | TCAACTCCCAGAAGCTTCCAAACTCCAGTTTCGAGTCATTACAGTTaGCCAGGTTGGCAATTTTCTCTTCTAACCCACAGTTGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: STPRSFQTPVSSHYS*PGWQFSLLTHSCSA Trigger: TGCCGAGCAACTGTGGGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAATGACTCGAAACTGGAGTTTGGAAGCTTCTGGGAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167598.6 ENSMUST00000199538.5 |
||
| CDS-3UTR CAA 90 bp | TCACCCCAAAGTGATGAAGTCATGCCCTCCTCAGCCTCTTTTGCAACTCTGCTCTTACAGTTGCCCAGGTaGGCAATTTTCTCTTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPQSDEVMPSSASFATLLLQLPR*AIFSSN Trigger: GTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAA...GAGCAGAGTTGCAAAAGAGGCTGAGGAGGGCATGACTTCATCACTTTGGGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS GCA 90 bp | TCAACTCCCAGAAGCTTCCAAACTCCAGTTTCGAGTCATTACAGTTaGCCAGGTTGGCAATTTTCTCTTCTAACCCACAGTTGCTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: STPRSFQTPVSSHYS*PGWQFSLLTHSCSQ Trigger: CTGAGAGCAACTGTGGGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAATGACTCGAAACTGGAGTTTGGAAGCTTCTGGGAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164481.7 |
||
| CDS CCA 90 bp | TCAGCAGGGGTCAGTGTTTCCTTTTTACCCGCCACAGAGTATTTATaGAAGTTCTTGATGAGTGTCTCAATGGCCCTCTCTACATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SAGVSVSFLPATEYL*KFLMSVSMALSTSL Trigger: CAGTGATGTAGAGAGGGCCATTGAGACACTCATCAAGAACTTCCATAAATACTCTGTGGCGGGTAAAAAGGAAACACTGACCCCTGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167598.6 ENSMUST00000199538.5 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGCAAGGATAGCACAGGGCAGACAACTACAGTTTAGGTGGGACAAGATTTTACAGTTGCCCAGGTaGGCAATTTTCTCTTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: EAARIAQGRQLQFRWDKILQLPR*AIFSSN Trigger: GTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAA...AATCTTGTCCCACCTAAACTGTAGTTGTCTGCCCTGTGCTATCCTTGCTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 |
||
| CDS GCA 72 bp | CCGAGTAACAGGCCTCTCCATCTTCACACTCTTGGCTaGTTCTCCAATCAACTCCCAGAAGCTTCCAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: PSNRPLHLHTLG*FSNQLPEASKL Trigger: GAGTTTGGAAGCTTCTGGGAGTTGATTGGAGAAGCAGCCAAGAGTGTGAAGATGGAGAGGCCTGTTACTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 ENSMUST00000199538.5 |
||
| CDS CAA 72 bp | CCAAACTCCAGTTTCGAGTCATTACAGTTGCCCAGGTaGGCAATTTTCTCTTCTAACCCACAGTTGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PNSSFESLQLPR*AIFSSNPQLLG Trigger: GCCGAGCAACTGTGGGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAATGACTCGAAACTGGAGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167598.6 ENSMUST00000199538.5 |
||
| CDS CAA 90 bp | CAGAAGCTTCCAAACTCCAGTTTCGAGTCATTACAGTTGCCCAGGTaGGCAATTTTCTCTTCTAACCCACAGTTGCTCGGCATGAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QKLPNSSFESLQLPR*AIFSSNPQLLGMRC Trigger: ACACCTCATGCCGAGCAACTGTGGGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAATGACTCGAAACTGGAGTTTGGAAGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167598.6 ENSMUST00000199538.5 |
||
| CDS CAA 90 bp | ATCAACTCCCAGAAGCTTCCAAACTCCAGTTTCGAGTCATTACAGTaGCCCAGGTTGGCAATTTTCTCTTCTAACCCACAGTTGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: INSQKLPNSSFESLQ*PRLAIFSSNPQLLG Trigger: GCCGAGCAACTGTGGGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAATGACTCGAAACTGGAGTTTGGAAGCTTCTGGGAGTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167598.6 ENSMUST00000199538.5 |
||
| CDS CAA 90 bp | ATCAACTCCCAGAAGCTTCCAAACTCCAGTTTCGAGTCATTACAGTaGCCCAGGTTGGCAATTTTCTCTTCTAACCCACAGTTGCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: INSQKLPNSSFESLQ*PRLAIFSSNPQLLS Trigger: TGAGAGCAACTGTGGGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAATGACTCGAAACTGGAGTTTGGAAGCTTCTGGGAGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164481.7 |
||
| CDS CAA 72 bp | CAGAAGCTTCCAAACTCCAGTTTCGAGTCATTACAGTaGCCCAGGTTGGCAATTTTCTCTTCTAACCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QKLPNSSFESLQ*PRLAIFSSNPQ Trigger: CTGTGGGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAATGACTCGAAACTGGAGTTTGGAAGCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 ENSMUST00000199538.5 |
||
| CDS GCA 72 bp | AGAAGCTTCCAAACTCCAGTTTCGAGTCATTACAGTTaGCCAGGTTGGCAATTTTCTCTTCTAACCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSFQTPVSSHYS*PGWQFSLLTHS Trigger: ACTGTGGGTTAGAAGAGAAAATTGCCAACCTGGGCAACTGTAATGACTCGAAACTGGAGTTTGGAAGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164481.7 ENSMUST00000167598.6 ENSMUST00000199538.5 |
||
| CDS CAA 90 bp | GTCAGTGTTTCCTTTTTACCCGCCACAGAGTATTTATGGAAGTTCTaGATGAGTGTCTCAATGGCCCTCTCTACATCACTGAATTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVSFLPATEYLWKF*MSVSMALSTSLNSW Trigger: CCAAGAATTCAGTGATGTAGAGAGGGCCATTGAGACACTCATCAAGAACTTCCATAAATACTCTGTGGCGGGTAAAAAGGAAACACTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167598.6 ENSMUST00000199538.5 |
||