RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RYR3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057378

Ensembl transcript IDs: ENSMUST00000080673.13, ENSMUST00000091818.6, ENSMUST00000134358.9, ENSMUST00000208135.2, ENSMUST00000208151.2, ENSMUST00000208290.2

Found 2059 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAAACGAGAGCTCCGTTAGCAGTCAGGTGGATTCCTTGACACTTTaGCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATT +
Preference number: 1 (lower is better)
Translates to: RNESSVSSQVDSLTL*HPSCTKAKLITKSI
Trigger: AATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTCAAGGAATCCACCTGACTGCTAACGGAGCTCTCGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGTCAGGTGGATTCCTTaGCACTTTGCCATCCTTCGT +
Preference number: 2 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRVRWIP*HFAILR
Trigger: ACGAAGGATGGCAAAGTGTCAAGGAATCCACCTGAC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTCAGGTGGATTCCTTaGCACTTTGCCATCCTTCGT +
Preference number: 2 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVRWIP*HFAILR
Trigger: ACGAAGGATGGCAAAGTGTCAAGGAATCCACCTGAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAAAGACGGACTCTGTTaGATTAGAAGGTGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRKDGLC*IRRWLF
Trigger: GAACAGCCACCTTCTAATGCAACAGAGTCCGTCTTT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAAAGACGGACTCTGTTaGATTAGAAGGTGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: MILCSSAHQSLARVLLHDKDGLC*IRRWLF
Trigger: GAACAGCCACCTTCTAATGCAACAGAGTCCGTCTTT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGATTCCTTGACACTTTaGCATCCTTCGTGCACAAAA +
Preference number: 2 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFDSLTL*HPSCTK
Trigger: TTTTGTGCACGAAGGATGGCAAAGTGTCAAGGAATC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTGTTGCATTAGAAGGTaGCTGTTCAGAACTGTAGCT +
Preference number: 2 (lower is better)
Translates to: QSLARVLLHDVQVFKISHCCIRR*LFRTVA
Trigger: AGCTACAGTTCTGAACAGCCACCTTCTAATGCAACA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTGTTGCATTAGAAGGTaGCTGTTCAGAACTGTAGCT +
Preference number: 2 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRCCIRR*LFRTVA
Trigger: AGCTACAGTTCTGAACAGCCACCTTCTAATGCAACA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTTCGCATTTCTCTCTaGACCATGTCGGTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFRISL*TMSVKN
Trigger: GTTTTTCACCGACATGGTTCAGAGAGAAATGCGAAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGATTCCTTGACACTTTaGCATCCTTCGTGCACAAAA +
Preference number: 2 (lower is better)
Translates to: MILCSSAHQSLARVLLHDDSLTL*HPSCTK
Trigger: TTTTGTGCACGAAGGATGGCAAAGTGTCAAGGAATC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTCAGGTGGATTCCTTaGCACTTTGCCATCCTTCGT +
Preference number: 2 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVRWIP*HFAILR
Trigger: ACGAAGGATGGCAAAGTGTCAAGGAATCCACCTGAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCTGAACCATGTCGGTaGAAAACTACTAAGTTTGTA +
Preference number: 2 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSEPCR*KTTKFV
Trigger: TACAAACTTAGTAGTTTTTCACCGACATGGTTCAGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTTCGCATTTCTCTCTaGACCATGTCGGTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSFRISL*TMSVKN
Trigger: GTTTTTCACCGACATGGTTCAGAGAGAAATGCGAAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAAAGACGGACTCTGTTaGATTAGAAGGTGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: LILETVTSKYHGKIRSKVKDGLC*IRRWLF
Trigger: GAACAGCCACCTTCTAATGCAACAGAGTCCGTCTTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAAAGACGGACTCTGTTaGATTAGAAGGTGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: KLILETVTSKYHGKIRSKKDGLC*IRRWLF
Trigger: GAACAGCCACCTTCTAATGCAACAGAGTCCGTCTTT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTTCGCATTTCTCTCTaGACCATGTCGGTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFRISL*TMSVKN
Trigger: GTTTTTCACCGACATGGTTCAGAGAGAAATGCGAAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAAAGACGGACTCTGTTaGATTAGAAGGTGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: KLFKLILETVTSKYHGKIKDGLC*IRRWLF
Trigger: GAACAGCCACCTTCTAATGCAACAGAGTCCGTCTTT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGATTCCTTGACACTTTaGCATCCTTCGTGCACAAAA +
Preference number: 2 (lower is better)
Translates to: LILETVTSKYHGKIRSKVDSLTL*HPSCTK
Trigger: TTTTGTGCACGAAGGATGGCAAAGTGTCAAGGAATC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTTCGCATTTCTCTCTaGACCATGTCGGTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFRISL*TMSVKN
Trigger: GTTTTTCACCGACATGGTTCAGAGAGAAATGCGAAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTGTTGCATTAGAAGGTaGCTGTTCAGAACTGTAGCT +
Preference number: 2 (lower is better)
Translates to: KLFKLILETVTSKYHGKICCIRR*LFRTVA
Trigger: AGCTACAGTTCTGAACAGCCACCTTCTAATGCAACA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCTGAACCATGTCGGTaGAAAACTACTAAGTTTGTA +
Preference number: 2 (lower is better)
Translates to: KLFKLILETVTSKYHGKISEPCR*KTTKFV
Trigger: TACAAACTTAGTAGTTTTTCACCGACATGGTTCAGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGTCAGGTGGATTCCTaGACACTTTGCCATCCTTCG +
Preference number: 3 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSQVDS*TLCHPS
Trigger: CGAAGGATGGCAAAGTGTCAAGGAATCCACCTGACT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGTCAGGTGGATTCCTaGACACTTTGCCATCCTTCG +
Preference number: 3 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSQVDS*TLCHPS
Trigger: CGAAGGATGGCAAAGTGTCAAGGAATCCACCTGACT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR TCA 72 bp GAAACGAGAGCTCCGTTAGCAGTCAGGTGGATTCCTTaGCACTTTGCCATCCTTCGTGCACAAAAGCCAAGT +
Preference number: 3 (lower is better)
Translates to: ETRAPLAVRWIP*HFAILRAQKPS
Trigger: ACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTCAAGGAATCCACCTGACTGCTAACGGAGCTCTCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR TCA 72 bp TTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATaGCGTTCAGGTGTTCAAGATTTCGCATTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: FCPSVPGKGPLT*RSGVQDFAFLS
Trigger: AGAGAGAAATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGTCAGGTGGATTCCTaGACACTTTGCCATCCTTCG +
Preference number: 3 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSQVDS*TLCHPS
Trigger: CGAAGGATGGCAAAGTGTCAAGGAATCCACCTGACT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGCTGTTTAATGGAGTaGTCCTTCTGGAACACAAAC +
Preference number: 3 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSCLME*SFWNTN
Trigger: GTTTGTGTTCCAGAAGGACAACTCCATTAAACAGCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR TCA 72 bp ACTTTATTGCAGTGGGCACTTCTTTTTATTGGAGATTaGCCTAAAACATGGCAGCTCCACTACTTACATGGG +
Preference number: 3 (lower is better)
Translates to: TLLQWALLFIGD*PKTWQLHYLHG
Trigger: CCCATGTAAGTAGTGGAGCTGCCATGTTTTAGGTCAATCTCCAATAAAAAGAAGTGCCCACTGCAATAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR GCA 72 bp AGTCAGGTGGATTCCTTGACACTTTGCCATCCTTCGTaGACAAAAGCCAAGTTAATTACCAAATCTATTTTT +
Preference number: 3 (lower is better)
Translates to: SQVDSLTLCHPS*TKAKLITKSIF
Trigger: AAAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTCAAGGAATCCACCTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
3UTR GCA 72 bp AAACATGGCAGCTCCACTACTTACATGGGACCATATTaGATCACTCAAGTTTGGTATAAGATTGAGATTTTT +
Preference number: 3 (lower is better)
Translates to: KHGSSTTYMGPY*ITQVWYKIEIF
Trigger: AAAAATCTCAATCTTATACCAAACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTACGGGGCATAGCCTaGAGAGGAGGCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVRGIA*RGGPAH
Trigger: GTGGGCTGGGCCTCCTCTTCAGGCTATGCCCCGTAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTCAGGACGACAGCCTaGCCTGGCCCAGCCAACACG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVRTTA*PGPANT
Trigger: CGTGTTGGCTGGGCCAGGCCAGGCTGTCGTCCTGAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTACGGGGCATAGCCTaGAGAGGAGGCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVRGIA*RGGPAH
Trigger: GTGGGCTGGGCCTCCTCTTCAGGCTATGCCCCGTAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGAGGGGAGCCATCCTaGAACAGGCCACCACTGCCC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRRGEPS*NRPPLP
Trigger: GGGCAGTGGTGGCCTGTTTCAGGATGGCTCCCCTCT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGAGGGGAGCCATCCTaGAACAGGCCACCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRGEPS*NRPPLP
Trigger: GGGCAGTGGTGGCCTGTTTCAGGATGGCTCCCCTCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCCAAGTCCCTCGGCTaGCAGGCAGAACTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPKSLG*QAELPL
Trigger: CAGCGGAAGTTCTGCCTGGCAGCCGAGGGACTTGGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGGGGTTCTAGGCACTaGACCACCCAGCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRGSRH*TTQPWR
Trigger: GCGCCATGGCTGGGTGGTGCAGTGCCTAGAACCCCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTCAGGACGACAGCCTaGCCTGGCCCAGCCAACACG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVRTTA*PGPANT
Trigger: CGTGTTGGCTGGGCCAGGCCAGGCTGTCGTCCTGAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGCACCACCCAGCCATaGCGCTCGCTCACCCGCTCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDCTTQP*RSLTRS
Trigger: AGAGCGGGTGAGCGAGCGCCATGGCTGGGTGGTGCA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGCACCACCCAGCCATaGCGCTCGCTCACCCGCTCT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSCTTQP*RSLTRS
Trigger: AGAGCGGGTGAGCGAGCGCCATGGCTGGGTGGTGCA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGCTGCCACATCCAGTaGGGTGGACCCCCTCATCGA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGCHIQ*GGPPHR
Trigger: TCGATGAGGGGGTCCACCCCACTGGATGTGGCAGCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCAGGGAGCGCAGGATaGACCGGATCCGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPGSAG*TGSGWL
Trigger: AAGCCATCCGGATCCGGTCCATCCTGCGCTCCCTGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCAGGGAGCGCAGGATaGACCGGATCCGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPGSAG*TGSGWL
Trigger: AAGCCATCCGGATCCGGTCCATCCTGCGCTCCCTGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCAACCAGGTCTTCCGTaGGGACCAGGGAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFQPGLP*GPGSAG
Trigger: TCCTGCGCTCCCTGGTCCCCACGGAAGACCTGGTTG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGTCAGGGCAGAAGTTaGCCGCCATGTCTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGQGRS*PPCLAR
Trigger: GCGAGCCAGACATGGCGGCCAACTTCTGCCCTGACC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGTCAGGGCAGAAGTTaGCCGCCATGTCTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGQGRS*PPCLAR
Trigger: GCGAGCCAGACATGGCGGCCAACTTCTGCCCTGACC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGGTTGTGTTCCGGATaGTGCGAGCAGCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRLCSG*CEQPGT
Trigger: AGTCCCAGGCTGCTCGCATCATCCGGAACACAACCG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGCGTAGAAGAGCTGTaGGAGGTCCACGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGVEEL*EVHVAA
Trigger: TGCAGCCACGTGGACCTCTCACAGCTCTTCTACGCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCATACCCACTGCTGCTaGGCGGCTTCAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRHTHCC*AASEET
Trigger: CGTCTCCTCTGAAGCCGCTCAGCAGCAGTGGGTATG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCATACCCACTGCTGCTaGGCGGCTTCAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFHTHCC*AASEET
Trigger: CGTCTCCTCTGAAGCCGCTCAGCAGCAGTGGGTATG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCCAAGTCCCTCGGCTaGCAGGCAGAACTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPKSLG*QAELPL
Trigger: CAGCGGAAGTTCTGCCTGGCAGCCGAGGGACTTGGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCCCAAGTCCCTCGGCTaGCAGGCAGAACTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSPKSLG*QAELPL
Trigger: CAGCGGAAGTTCTGCCTGGCAGCCGAGGGACTTGGG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGAGAGCTGCCGAAATaGTCTGCACCCGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRELPK*SAPAPP
Trigger: CGGTGGAGCGGGTGCAGAGCATTTCGGCAGCTCTCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGACGACAGCCTGGCCTaGCCCAGCCAACACGCATGT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSDDSLA*PSQHAC
Trigger: ACATGCGTGTTGGCTGGGCCAGGCCAGGCTGTCGTC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGACATCCAGCCGAGGTaGACACTGTGGGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHDIQPR*TLWGGV
Trigger: AACCCCACCCCACAGTGTCCACCTCGGCTGGATGTC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCACAGGGTCTCGGATGTaGGCCCCGCTACAGTGCACG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSTGSRM*APLQCT
Trigger: CGTGCACTGTAGCGGGGCCCACATCCGAGACCCTGT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCTCTCGGATCTCCTCTaGGCAGGGGCAGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLSDLL*AGAVLS
Trigger: GGAGAGAACTGCCCCTGCCCAGAGGAGATCCGAGAG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCTCTCGGATCTCCTCTaGGCAGGGGCAGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFLSDLL*AGAVLS
Trigger: GGAGAGAACTGCCCCTGCCCAGAGGAGATCCGAGAG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGCGCTCCCCTTCGATaGGGTTCCAGCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSAPLR*GSSQRQ
Trigger: CTGACGTTGGCTGGAACCCCATCGAAGGGGAGCGCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCAACCAGGTCTTCCGTaGGGACCAGGGAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSQPGLP*GPGSAG
Trigger: TCCTGCGCTCCCTGGTCCCCACGGAAGACCTGGTTG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGCAGGGTCCTGTGCTaGGGGGCAGGTTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSRVLC*GAGSQV
Trigger: GACCTGAGAACCTGCCCCCCAGCACAGGACCCTGCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGCAGGGTCCTGTGCTaGGGGGCAGGTTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSRVLC*GAGSQV
Trigger: GACCTGAGAACCTGCCCCCCAGCACAGGACCCTGCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGGGTGGGGATGAAGTaGCTTCGAAGCAGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRVGMK*LRSRSG
Trigger: GCCCGACCTGCTTCGAAGCCACTTCATCCCCACCCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCGGTTGTGTTCCGGATaGTGCGAGCAGCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRLCSG*CEQPGT
Trigger: AGTCCCAGGCTGCTCGCATCATCCGGAACACAACCG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGACGTGCTGGTAGGCTaGAGGAAGACTGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFDVLVG*RKTAGN
Trigger: GTTCCCTGCAGTCTTCCTTCAGCCTACCAGCACGTC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGACGTGCTGGTAGGCTaGAGGAAGACTGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHDVLVG*RKTAGN
Trigger: GTTCCCTGCAGTCTTCCTTCAGCCTACCAGCACGTC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCTGCAGCAAGCCTTTaGCTGGAGCCTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSAASL*LEPPCR
Trigger: CCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCGCACATCTGCAGCTTaGCAGACTCAGGCAATCGGG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRTSAA*QTQAIG
Trigger: CCCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCACAGAGGCCTGGCTaGTGGTGTAGGTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSQRPG*WCRSSA
Trigger: TGCGGAAGACCTACACCATCAGCCAGGCCTCTGTGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCCTCTGTGCCTTGGTaGGGGAGCGTCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPSVPW*GSVLWK
Trigger: TTTCCAAAGGACGCTCCCTCACCAAGGCACAGAGGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCCTCTGTGCCTTGGTaGGGGAGCGTCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPSVPW*GSVLWK
Trigger: TTTCCAAAGGACGCTCCCTCACCAAGGCACAGAGGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCATACCCACTGCTGCTaGGCGGCTTCAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDHTHCC*AASEET
Trigger: CGTCTCCTCTGAAGCCGCTCAGCAGCAGTGGGTATG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCTCCAGGGTGGGGATaGAGTGGCTTCGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSPGWG*SGFEAG
Trigger: ACCTGCTTCGAAGCCACTTCATCCCCACCCTGGAGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCCCACAGCCTACTGTaGGCCAGGCTTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSHSLL*ARLCWF
Trigger: GAACCAGCAAAGCCTGGCTCACAGTAGGCTGTGGGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCCCACAGCCTACTGTaGGCCAGGCTTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSHSLL*ARLCWF
Trigger: GAACCAGCAAAGCCTGGCTCACAGTAGGCTGTGGGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGTCCCACTGCCCCTTaGTGTCATCCTCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGPTAP*CHPQMA
Trigger: AGCCATCTGAGGATGACATCAAGGGGCAGTGGGACC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGGCCTGTGGTAAGATaGCGGAGTCGGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDWPVVR*RSRKAW
Trigger: CCAGGCCTTCCGACTCCGGCATCTTACCACAGGCCA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGCCTGGGACTCTTCCTaGTGGCACCTCTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFAWDSS*WHLCSV
Trigger: AACACTGCAGAGGTGCCAGCAGGAAGAGTCCCAGGC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGAGGTCCACGTGGCTaGACAGGGCAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRGPRG*TGQKPL
Trigger: GAGTGGCTTCTGCCCTGTGCAGCCACGTGGACCTCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGAGGTCCACGTGGCTaGACAGGGCAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRGPRG*TGQKPL
Trigger: GAGTGGCTTCTGCCCTGTGCAGCCACGTGGACCTCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCATCACAGAGGAGGCTaGCACATCCAGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHHHRGG*HIQWGG
Trigger: TCCACCCCACTGGATGTGGCAGCCTCCTCTGTGATG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTATGGTGTCCCTCTGTaGCTTGGTGAGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHYGVPL*LGEGAS
Trigger: GGACGCTCCCTCACCAAGGCACAGAGGGACACCATA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGCTTCTCAGTGAGGTaGAGCTCCTCCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSFSVR*SSSSTA
Trigger: GGCTGTGGAGGAGGAGCTGCACCTCACTGAGAAGCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGCTTCTCAGTGAGGTaGAGCTCCTCCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSFSVR*SSSSTA
Trigger: GGCTGTGGAGGAGGAGCTGCACCTCACTGAGAAGCT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGCTGCCACCACCCTTaGTTTCCAGCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGCHHP*FPAPAS
Trigger: AGAAGCTGGAGCTGGAAAGCAAGGGTGGTGGCAGCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGCTGCCACCACCCTTaGTTTCCAGCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGCHHP*FPAPAS
Trigger: AGAAGCTGGAGCTGGAAAGCAAGGGTGGTGGCAGCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCCAAAAGCGGGTGGCTaGCACCACCCTTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFPKAGG*HHPCFP
Trigger: TGGAAAGCAAGGGTGGTGGCAGCCACCCGCTTTTGG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGCTGCTCCTCCTCCTaGACAGTCTTCACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSCSSS*TVFTAF
Trigger: GAAGGCGGTGAAGACTGTGCAGGAGGAGGAGCAGCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCTGGGTGTCCCCCTTaGCATCGGTCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPGCPP*HRSSAA
Trigger: AGCAGCTGAAGACCGATGGCAAGGGGGACACCCAGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGAGAGCTGCCGAAATaGTCTGCACCCGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRELPK*SAPAPP
Trigger: CGGTGGAGCGGGTGCAGAGCATTTCGGCAGCTCTCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTGAAGGACCATCTCTaGAGCACCACGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLKDHL*STTLVQ
Trigger: CTGCACGAGCGTGGTGCTGCAGAGATGGTCCTTCAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCGGAGTCGGAAGGCCTaGCCCCACCTGATGTTACTG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRSRKA*PHLMLL
Trigger: CAGTAACATCAGGTGGGGCCAGGCCTTCCGACTCCG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATGATGCGAGCAGCCTaGGACTCTTCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHMMRAA*DSSCWH
Trigger: GTGCCAGCAGGAAGAGTCCCAGGCTGCTCGCATCAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGGTCACCTTGAGGCATaGAGGGCTGTCCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSGHLEA*RAVHGA
Trigger: GGCACCATGGACAGCCCTCCATGCCTCAAGGTGACC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCGAGGTGGACACTGTaGGGTGGGGTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPRWTL*GGVLLF
Trigger: GAAGAGAAGAACCCCACCCCACAGTGTCCACCTCGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGTCTTCCGCAGAGCCTaGAGCAACTCCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRVFRRA*SNSPML
Trigger: CAGCATTGGGGAGTTGCTCCAGGCTCTGCGGAAGAC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGTACCAAAAGCGGGTaGCTGCCACCACCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGTKSG*LPPPLL
Trigger: AAGCAAGGGTGGTGGCAGCCACCCGCTTTTGGTACC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACTGAGAGGGGATTGTaGCGGTTAAGGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTERGL*RLRLGS
Trigger: GGAGCCCAGCCTTAACCGCCACAATCCCCTCTCAGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTACTGAGAGGGGATTGTaGCGGTTAAGGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFTERGL*RLRLGS
Trigger: GGAGCCCAGCCTTAACCGCCACAATCCCCTCTCAGT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCACTGAGAGGGGATTGTaGCGGTTAAGGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRTERGL*RLRLGS
Trigger: GGAGCCCAGCCTTAACCGCCACAATCCCCTCTCAGT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGGGTGGGGATGAAGTaGCTTCGAAGCAGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRVGMK*LRSRSG
Trigger: GCCCGACCTGCTTCGAAGCCACTTCATCCCCACCCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGGGTGGGGATGAAGTaGCTTCGAAGCAGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRVGMK*LRSRSG
Trigger: GCCCGACCTGCTTCGAAGCCACTTCATCCCCACCCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGCAGCTGGGTTAACATaGGCAATGTGGCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSAAGLT*AMWHPR
Trigger: CCTGGGGTGCCACATTGCTCATGTTAACCCAGCTGC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCCAACCCAGACACATaGTGGGTCCTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSNPDT*WVLPSK
Trigger: TTTGCTGGGCAGGACCCATCATGTGTCTGGGTTGGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCTGCAGCAAGCCTTTaGCTGGAGCCTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSAASL*LEPPCR
Trigger: CCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCGCACATCTGCAGCTTaGCAGACTCAGGCAATCGGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRTSAA*QTQAIG
Trigger: CCCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGGACAGCACAACATTTaGGAGATCCAGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDGQHNI*EIQRGG
Trigger: CCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGGACAGCACAACATTTaGGAGATCCAGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSGQHNI*EIQRGG
Trigger: CCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACACCTCCACCATTCCCTaGAGCTCCCTGGACAGCACA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDTSTIP*SSLDST
Trigger: TGTGCTGTCCAGGGAGCTTCAGGGAATGGTGGAGGT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATCAGGCCTTCCAGCTaGGGGATGTCAGGACACATG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFIRPSS*GMSGHM
Trigger: CATGTGTCCTGACATCCCTCAGCTGGAAGGCCTGAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATCAGGCCTTCCAGCTaGGGGATGTCAGGACACATG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHIRPSS*GMSGHM
Trigger: CATGTGTCCTGACATCCCTCAGCTGGAAGGCCTGAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGTGTACCGGGCACCTaGCTCGGCCAAGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSVPGT*LGQVID
Trigger: ATCAATGACTTGGCCGAGTCAGGTGCCCGGTACACT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGTGTACCGGGCACCTaGCTCGGCCAAGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSVPGT*LGQVID
Trigger: ATCAATGACTTGGCCGAGTCAGGTGCCCGGTACACT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCAAACTCATCTAGGATaGGGAGCTCAGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHQTHLG*GAQPPG
Trigger: CCCAGGAGGCTGAGCTCCTCATCCTAGATGAGTTTG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGAGGGGAGCCATCCTaGAACAGGCCACCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRGEPS*NRPPLP
Trigger: GGGCAGTGGTGGCCTGTTTCAGGATGGCTCCCCTCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCCCACAGCCTACTGTaGGCCAGGCTTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSHSLL*ARLCWF
Trigger: GAACCAGCAAAGCCTGGCTCACAGTAGGCTGTGGGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGTCCAACAGACTCTTaGGACGGGAATCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGPTDS*DGNRWA
Trigger: TGCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCTTGGCCCCACCCATaGTCTCAATTCGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSWPHP*SQFDPG
Trigger: ACCTGGGTCGAATTGAGATCATGGGTGGGGCCAAGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGGTCCCACTGCCCCTTaGTGTCATCCTCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSGPTAP*CHPQMA
Trigger: AGCCATCTGAGGATGACATCAAGGGGCAGTGGGACC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGCCTGGGACTCTTCCTaGTGGCACCTCTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDAWDSS*WHLCSV
Trigger: AACACTGCAGAGGTGCCAGCAGGAAGAGTCCCAGGC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCATCACCGACACCATTaGCTCCCCATCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRHHRHH*LPILLH
Trigger: GTGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCATCACCGACACCATTaGCTCCCCATCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHHHRHH*LPILLH
Trigger: GTGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCTCAGGGATGTGGAGTaGCATCATCTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLRDVE*HHLQGF
Trigger: GAACCCCTGCAGATGATGGCACTCCACATCCCTGAG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTGCATCAGGTCCTCCTaGTCACAGAGCTCGAGGATG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFCIRSS*SQSSRM
Trigger: CATCCTCGAGCTCTGTGAGCAGGAGGACCTGATGCA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTGCATCAGGTCCTCCTaGTCACAGAGCTCGAGGATG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRCIRSS*SQSSRM
Trigger: CATCCTCGAGCTCTGTGAGCAGGAGGACCTGATGCA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGAACAGCACCATGGGTaGCTTGTGGTCAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFREQHHG*LVVRAE
Trigger: TTCTGCCCTGACCACAAGGCACCCATGGTGCTGTTC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTATGGTGTCCCTCTGTaGCTTGGTGAGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDYGVPL*LGEGAS
Trigger: GGACGCTCCCTCACCAAGGCACAGAGGGACACCATA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCAAAAGCGGGTGGCTaGCACCACCCTTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPKAGG*HHPCFP
Trigger: TGGAAAGCAAGGGTGGTGGCAGCCACCCGCTTTTGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGGGCATACACTGCGATaGGCTTCATCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSGHTLR*ASSRRP
Trigger: AGGCCTCCTGGATGAAGCGCATCGCAGTGTATGCCC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGCTGCTCCTCCTCCTaGACAGTCTTCACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSCSSS*TVFTAF
Trigger: GAAGGCGGTGAAGACTGTGCAGGAGGAGGAGCAGCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGACCTCGGCCACCATaGGGAAGAGCTGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRPRPP*GRAGQN
Trigger: ATTCTGACCAGCTCTTCCGCATGGTGGCCGAGGTCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGACCTCGGCCACCATaGGGAAGAGCTGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRRPRPP*GRAGQN
Trigger: ATTCTGACCAGCTCTTCCGCATGGTGGCCGAGGTCT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTGAAGGACCATCTCTaGAGCACCACGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLKDHL*STTLVQ
Trigger: CTGCACGAGCGTGGTGCTGCAGAGATGGTCCTTCAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCACTCTGATGTTCTTTaGCCCTTCGACAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRHSDVL*PFDKAP
Trigger: GGGGGCCTTGTCGAAGGGGCAAAGAACATCAGAGTG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACATGTCTTCCCGTACTTaGTCCTGCTGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDMSSRT*SCWSRS
Trigger: GCTGCGGGACCAGCAGGAGCAAGTACGGGAAGACAT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATGATGCGAGCAGCCTaGGACTCTTCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSMMRAA*DSSCWH
Trigger: GTGCCAGCAGGAAGAGTCCCAGGCTGCTCGCATCAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACATGATGCGAGCAGCCTaGGACTCTTCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDMMRAA*DSSCWH
Trigger: GTGCCAGCAGGAAGAGTCCCAGGCTGCTCGCATCAT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCCCGACCACATCTCCTaGCTGCCAAGTTCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFPDHIS*LPSSSK
Trigger: TTTGGACGAACTTGGCAGCCAGGAGATGTGGTCGGG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGAGAACCTGAAGCCTaGCTTGAGGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGEPEA*LEACPQ
Trigger: CTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGAGAACCTGAAGCCTaGCTTGAGGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGEPEA*LEACPQ
Trigger: CTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTACAGGGTCTCGGATGTaGGCCCCGCTACAGTGCACG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSTGSRM*APLQCT
Trigger: CGTGCACTGTAGCGGGGCCCACATCCGAGACCCTGT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAACAGGGTCTCGGATGTaGGCCCCGCTACAGTGCACG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKTGSRM*APLQCT
Trigger: CGTGCACTGTAGCGGGGCCCACATCCGAGACCCTGT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCAGCAAGCCTTTGACTaGAGCCTCCTTGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHQQAFD*SLLAGL
Trigger: AAGGCCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCAGCAAGCCTTTGACTaGAGCCTCCTTGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFQQAFD*SLLAGL
Trigger: AAGGCCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCAGCAAGCCTTTGACTaGAGCCTCCTTGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRQQAFD*SLLAGL
Trigger: AAGGCCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTCACCCCTCAGAGCTaGGCCGAAGCACTCGGGACG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSFTPQS*AEALGT
Trigger: CGTCCCGAGTGCTTCGGCCCAGCTCTGAGGGGTGAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTCACCCCTCAGAGCTaGGCCGAAGCACTCGGGACG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFTPQS*AEALGT
Trigger: CGTCCCGAGTGCTTCGGCCCAGCTCTGAGGGGTGAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTGGACCGGATCCGGATaGCTTCCCCTTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHWTGSG*LPLSLF
Trigger: AAACAGGGAAAGGGGAAGCCATCCGGATCCGGTCCA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGGTCAGGGCAGAAGTTaGCCGCCATGTCTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSGQGRS*PPCLAR
Trigger: GCGAGCCAGACATGGCGGCCAACTTCTGCCCTGACC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGGTACCAAAAGCGGGTaGCTGCCACCACCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDGTKSG*LPPPLL
Trigger: AAGCAAGGGTGGTGGCAGCCACCCGCTTTTGGTACC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTCCTCCACCTTGTCTaGCATCCCCAGAATAGAGCG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVLHLV*HPQNRA
Trigger: CGCTCTATTCTGGGGATGCCAGACAAGGTGGAGGAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGTCCTCCACCTTGTCTaGCATCCCCAGAATAGAGCG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFVLHLV*HPQNRA
Trigger: CGCTCTATTCTGGGGATGCCAGACAAGGTGGAGGAC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGAGCTCCTGGTCGCCTaGAGTACACATGTTCAGACC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHELLVA*STHVQT
Trigger: GGTCTGAACATGTGTACTCCAGGCGACCAGGAGCTC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTTGTGCTTTGTAGGTaGCCCAAAGGCCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLVLCR*PKGHWL
Trigger: TAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTACGGGGCATAGCCTaGAGAGGAGGCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVRGIA*RGGPAH
Trigger: GTGGGCTGGGCCTCCTCTTCAGGCTATGCCCCGTAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCTGGGTATCCGTCCTaGCCACAGATGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSGYPS*PQMKPI
Trigger: GATGGGCTTCATCTGTGGTCAGGACGGATACCCAGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCAAACACGAAGGCTTaGTCATCAGCCCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSNTKA*SSAPSS
Trigger: TGAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCAAACACGAAGGCTTaGTCATCAGCCCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSNTKA*SSAPSS
Trigger: TGAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGCTCTGTCTCCACTTTaGGGAAGCTGCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSALSPL*GSCWAF
Trigger: GAATGCCCAGCAGCTTCCTCAAAGTGGAGACAGAGC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCAGCCTCTGTGGTGCTaGGGGACACTGTATCTAGAG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSQPLWC*GTLYLE
Trigger: CTCTAGATACAGTGTCCCTCAGCACCACAGAGGCTG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGTGTACCGGGCACCTaGCTCGGCCAAGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSVPGT*LGQVID
Trigger: ATCAATGACTTGGCCGAGTCAGGTGCCCGGTACACT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATTTTGCGAGTGAGATaGGCTCCTGGTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSILRVR*APGRLE
Trigger: CTCCAGGCGACCAGGAGCTCATCTCACTCGCAAAAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTGCCAATGCCGCAGATaGAGCACTTGGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFCQCRR*STWSPC
Trigger: ACATGGAGACCAAGTGCTTCATCTGCGGCATTGGCA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATGGCCTGTGGTAAGATaGCGGAGTCGGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKWPVVR*RSRKAW
Trigger: CCAGGCCTTCCGACTCCGGCATCTTACCACAGGCCA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTGGCCTGTGGTAAGATaGCGGAGTCGGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSWPVVR*RSRKAW
Trigger: CCAGGCCTTCCGACTCCGGCATCTTACCACAGGCCA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCCTGCTGGCACCTCTaGAGTGTTAATCCGTCATCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSCWHL*SVNPSS
Trigger: GGATGACGGATTAACACTGCAGAGGTGCCAGCAGGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTCAGGGATGTGGAGTaGCATCATCTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLRDVE*HHLQGF
Trigger: GAACCCCTGCAGATGATGGCACTCCACATCCCTGAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGAACAGCACCATGGGTaGCTTGTGGTCAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSEQHHG*LVVRAE
Trigger: TTCTGCCCTGACCACAAGGCACCCATGGTGCTGTTC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGAACAGCACCATGGGTaGCTTGTGGTCAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDEQHHG*LVVRAE
Trigger: TTCTGCCCTGACCACAAGGCACCCATGGTGCTGTTC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCCTGGGTGTCCCCCTTaGCATCGGTCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSPGCPP*HRSSAA
Trigger: AGCAGCTGAAGACCGATGGCAAGGGGGACACCCAGG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGAGAGCTGCCGAAATaGTCTGCACCCGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSRELPK*SAPAPP
Trigger: CGGTGGAGCGGGTGCAGAGCATTTCGGCAGCTCTCT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCACTCTGATGTTCTTTaGCCCTTCGACAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDHSDVL*PFDKAP
Trigger: GGGGGCCTTGTCGAAGGGGCAAAGAACATCAGAGTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACACCAAGCGGTCCCACTaGCCCTTGATGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDTKRSH*PLMSSS
Trigger: TGAGGATGACATCAAGGGGCAGTGGGACCGCTTGGT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCACCAATGCCTCCACCTaGTCTTACGCCCACGTACAT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRTNAST*SYAHVH
Trigger: ATGTACGTGGGCGTAAGAGCAGGTGGAGGCATTGGT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTACTTGGCTTCTGAGGTaGGTTCCAAGAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFTWLLR*VPRSTG
Trigger: GCCTGTGCTTCTTGGAACCCACCTCAGAAGCCAAGT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACTTGGCTTCTGAGGTaGGTTCCAAGAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTWLLR*VPRSTG
Trigger: GCCTGTGCTTCTTGGAACCCACCTCAGAAGCCAAGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAACAGGCTTCTCCTGTaGCATGTTCCCGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFNRLLL*HVPADL
Trigger: TAGGTCTGCGGGAACATGCCACAGGAGAAGCCTGTT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATAGAGACCTGGCTCTaGTCCCAGCTCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSIETWL*SQLLQL
Trigger: AAGCTGGAGGAGCTGGGACCAGAGCCAGGTCTCTAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCCCAGGAAGATGTTTaGCCGGATGCTGGTGACATC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSQEDV*PDAGDI
Trigger: GATGTCACCAGCATCCGGCCAAACATCTTCCTGGGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGGAAGCCACAGCTCTaGGTATCCGTCCTGACCACA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDWKPQL*VSVLTT
Trigger: TGTGGTCAGGACGGATACCCAGAGCTGTGGCTTCCA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATCCCCCAAAGCTCGTaGATGTTCTCAGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFIPQSS*MFSASL
Trigger: CAGACTGGCTGAGAACATCCACGAGCTTTGGGGGAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTCAGGACGACAGCCTaGCCTGGCCCAGCCAACACG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKVRTTA*PGPANT
Trigger: CGTGTTGGCTGGGCCAGGCCAGGCTGTCGTCCTGAC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGTGGACACTGTGGGGTaGGGTTCTTCTCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFVDTVG*GSSLHS
Trigger: AGAGTGAAGAGAAGAACCCCACCCCACAGTGTCCAC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGCACCACCCAGCCATaGCGCTCGCTCACCCGCTCT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKCTTQP*RSLTRS
Trigger: AGAGCGGGTGAGCGAGCGCCATGGCTGGGTGGTGCA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTCTCCTCAGGGATGTaGAGTGCCATCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFSSGM*SAIICR
Trigger: CCTGCAGATGATGGCACTCCACATCCCTGAGGAGAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTCTCCTCAGGGATGTaGAGTGCCATCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFSSGM*SAIICR
Trigger: CCTGCAGATGATGGCACTCCACATCCCTGAGGAGAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTCTCCTCAGGGATGTaGAGTGCCATCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFSSGM*SAIICR
Trigger: CCTGCAGATGATGGCACTCCACATCCCTGAGGAGAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGGAGAACCTGAAGCCTaGCTTGAGGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSGEPEA*LEACPQ
Trigger: CTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCAGCAAGCCTTTGACTaGAGCCTCCTTGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSQQAFD*SLLAGL
Trigger: AAGGCCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGGACCGGATCCGGATaGCTTCCCCTTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDWTGSG*LPLSLF
Trigger: AAACAGGGAAAGGGGAAGCCATCCGGATCCGGTCCA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGATGGATGTCAGGATaGGAAGCAGAGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRWMSG*EAEPLW
Trigger: CCACAGTGGCTCTGCTTCCCATCCTGACATCCATCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTACCATGCGGAAGAGCTaGTCAGAATCAGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFTMRKS*SESGSG
Trigger: CCCAGATCCTGATTCTGACCAGCTCTTCCGCATGGT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGAGCTCCTGGTCGCCTaGAGTACACATGTTCAGACC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSELLVA*STHVQT
Trigger: GGTCTGAACATGTGTACTCCAGGCGACCAGGAGCTC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGAGCTCCTGGTCGCCTaGAGTACACATGTTCAGACC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDELLVA*STHVQT
Trigger: GGTCTGAACATGTGTACTCCAGGCGACCAGGAGCTC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGTGAGATGAGCTCCTaGTCGCCTGGAGTACACATG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSEMSS*SPGVHM
Trigger: CATGTGTACTCCAGGCGACCAGGAGCTCATCTCACT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTGCCTCCGTTCAGAATaGCAATCCCCAGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRCLRSE*QSPASV
Trigger: CACTGAAGCTGGGGATTGCCATTCTGAACGGAGGCA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTGCCTCCGTTCAGAATaGCAATCCCCAGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHCLRSE*QSPASV
Trigger: CACTGAAGCTGGGGATTGCCATTCTGAACGGAGGCA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCCTATGTCCTTGGCTaGCTCATGGAACCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPYVLG*LMEPLY
Trigger: GTAGAGAGGTTCCATGAGCCAGCCAAGGACATAGGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGGATCCCAAACTGAGTaGGGTCGGGCATGTCACCTA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDGSQTE*GRACHL
Trigger: TAGGTGACATGCCCGACCCCACTCAGTTTGGGATCC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGCCATAAAGGCTTCTaGCTTCTCAGCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGHKGF*LLSLLT
Trigger: GGTCAGAAGGCTGAGAAGCCAGAAGCCTTTATGGCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGCCATAAAGGCTTCTaGCTTCTCAGCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGHKGF*LLSLLT
Trigger: GGTCAGAAGGCTGAGAAGCCAGAAGCCTTTATGGCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCAGTCCTCAGGAACTaGATCTCATCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSVLRN*ISSSPP
Trigger: AGGAGGCGAGGATGAGATCCAGTTCCTGAGGACTGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTTGTGCTTTGTAGGTaGCCCAAAGGCCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLVLCR*PKGHWL
Trigger: TAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTACGGGGCATAGCCTaGAGAGGAGGCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVRGIA*RGGPAH
Trigger: GTGGGCTGGGCCTCCTCTTCAGGCTATGCCCCGTAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGTTTCAGGGAGCTTTaGAAACTCCACAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSFREL*KLHKAG
Trigger: CCCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGTTCCCCATTCAGTGTaGAGACCATGGAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRVPHSV*RPWRHH
Trigger: ATGATGCCTCCATGGTCTTCACACTGAATGGGGAAC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACGCACATCTGCAGCTTaGCAGACTCAGGCAATCGGG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRTSAA*QTQAIG
Trigger: CCCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGTTCAGGGCCTGCATaGGCTCATTGTAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSCSGPA*AHCSGT
Trigger: AGTTCCGCTACAATGAGCTCATGCAGGCCCTGAACA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTCTCCGAAGGAGGTTaGACATCATCCTCACCAGTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVSEGG*TSSSPV
Trigger: AACTGGTGAGGATGATGTTCAACCTCCTTCGGAGAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCAGTACCCAGCACATTaGCCATCACTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRQYPAH*PSLPSQ
Trigger: CTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCAGTACCCAGCACATTaGCCATCACTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHQYPAH*PSLPSQ
Trigger: CTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTTTCCCTGTTTGGATaGGATGCATTTCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLSLFG*DAFREH
Trigger: GTGCTCCCGAAATGCATCTCATCCAAACAGGGAAAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCCATCTGCATCCACTaGGACCTGCTTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSICIH*DLLLQC
Trigger: ACATTGGAGAAGCAGGTCTCAGTGGATGCAGATGGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCCATCTGCATCCACTaGGACCTGCTTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSICIH*DLLLQC
Trigger: ACATTGGAGAAGCAGGTCTCAGTGGATGCAGATGGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAACCTCCACCATTCCCTaGAGCTCCCTGGACAGCACA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKTSTIP*SSLDST
Trigger: TGTGCTGTCCAGGGAGCTTCAGGGAATGGTGGAGGT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCTGAGAAACACCTTTaGTCTGCGTTCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSEKHL*SAFGNG
Trigger: CCCATTCCCGAACGCAGATCAAAGGTGTTTCTCAGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTTGGTGTTGAAGACTaGGAGGGGATTGTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFGVED*EGIVAV
Trigger: AACCGCCACAATCCCCTCTCAGTCTTCAACACCAAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCTCCAGGGTGGGGATaGAGTGGCTTCGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSPGWG*SGFEAG
Trigger: ACCTGCTTCGAAGCCACTTCATCCCCACCCTGGAGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATTTACACCACAGAATaGAGACCTCGGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFIYTTE*RPRPPC
Trigger: GCATGGTGGCCGAGGTCTTCATTCTGTGGTGTAAAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGAGGGGAGCCATCCTaGAACAGGCCACCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRGEPS*NRPPLP
Trigger: GGGCAGTGGTGGCCTGTTTCAGGATGGCTCCCCTCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTGGCACTTATCATCTaGAGGACCATCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLALII*RTISAA
Trigger: TGCTGCAGAGATGGTCCTTCAGATGATAAGTGCCAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCTGGCACTTATCATCTaGAGGACCATCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFLALII*RTISAA
Trigger: TGCTGCAGAGATGGTCCTTCAGATGATAAGTGCCAG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATCACCACCATGTCCTaGAGGAGATCCAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHITTMS*RRSKSS
Trigger: GGAACTCTTGGATCTCCTTCAGGACATGGTGGTGAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGGTCCCACTGCCCCTTaGTGTCATCCTCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSGPTAP*CHPQMA
Trigger: AGCCATCTGAGGATGACATCAAGGGGCAGTGGGACC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGCCAATGCCGCAGATaGAGCACTTGGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSCQCRR*STWSPC
Trigger: ACATGGAGACCAAGTGCTTCATCTGCGGCATTGGCA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGCCAATGCCGCAGATaGAGCACTTGGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDCQCRR*STWSPC
Trigger: ACATGGAGACCAAGTGCTTCATCTGCGGCATTGGCA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCCCAAGTCCCTCGGCTaGCAGGCAGAACTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSPKSLG*QAELPL
Trigger: CAGCGGAAGTTCTGCCTGGCAGCCGAGGGACTTGGG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCCTGCTGGCACCTCTaGAGTGTTAATCCGTCATCC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSCWHL*SVNPSS
Trigger: GGATGACGGATTAACACTGCAGAGGTGCCAGCAGGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTGGTTGGCTCTTACTaGAACCCCATTGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLVGSY*NPIAET
Trigger: TGTCTCTGCAATGGGGTTGCAGTAAGAGCCAACCAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCCACAAGGCAGGGATaGTGCCTTTTGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSTRQG*CLLLSS
Trigger: GGATGACAACAAAAGGCAGCATCCCTGCCTTGTGGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCCACAAGGCAGGGATaGTGCCTTTTGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSTRQG*CLLLSS
Trigger: GGATGACAACAAAAGGCAGCATCCCTGCCTTGTGGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGTCCAAAATACCCACTaGCTTGATGCCAACGCTGAC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFVQNTH*LDANAD
Trigger: GTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGAC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTCCAAAATACCCACTaGCTTGATGCCAACGCTGAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVQNTH*LDANAD
Trigger: GTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGAGGGCTGTCCATGGTaGCATCAATTCTCACAACCT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFREGCPW*HQFSQP
Trigger: AGGTTGTGAGAATTGATGGCACCATGGACAGCCCTC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGCGGAACTTCTGATTTaGCTGCAGCTTGGACACGTA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFAELLI*LQLGHV
Trigger: TACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGCGGAACTTCTGATTTaGCTGCAGCTTGGACACGTA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRAELLI*LQLGHV
Trigger: TACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCTTCCTCTGTTGGCTaGTCCTTCTCAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSSSVG*SFSGLG
Trigger: ACCCAAGCCTGAGAAGGAGCAGCCAACAGAGGAAGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCACAGTCTCATGCATaGCGAGGACTCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSQSHA*RGLSSG
Trigger: ACCTGATGAGAGTCCTCGGCATGCATGAGACTGTGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCACAGTCTCATGCATaGCGAGGACTCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSQSHA*RGLSSG
Trigger: ACCTGATGAGAGTCCTCGGCATGCATGAGACTGTGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACATCACAGAGGAGGCTaGCACATCCAGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKHHRGG*HIQWGG
Trigger: TCCACCCCACTGGATGTGGCAGCCTCCTCTGTGATG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGCTTCTCAGTGAGGTaGAGCTCCTCCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSFSVR*SSSSTA
Trigger: GGCTGTGGAGGAGGAGCTGCACCTCACTGAGAAGCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGCATCCACTGAGACCTaGTTCTCCAATGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFASTET*FSNVAV
Trigger: TACAGCCACATTGGAGAAGCAGGTCTCAGTGGATGC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACCAAAAGCGGGTGGCTaGCACCACCCTTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKPKAGG*HHPCFP
Trigger: TGGAAAGCAAGGGTGGTGGCAGCCACCCGCTTTTGG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCAAGGGAGTAGAGGCTaGACAGAATGTGGTAGCATG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHQGSRG*TECGSM
Trigger: CATGCTACCACATTCTGTGCAGCCTCTACTCCCTTG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGGGCATACACTGCGATaGGCTTCATCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKGHTLR*ASSRRP
Trigger: AGGCCTCCTGGATGAAGCGCATCGCAGTGTATGCCC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGGGCATACACTGCGATaGGCTTCATCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSGHTLR*ASSRRP
Trigger: AGGCCTCCTGGATGAAGCGCATCGCAGTGTATGCCC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGCTGCTCCTCCTCCTaGACAGTCTTCACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSCSSS*TVFTAF
Trigger: GAAGGCGGTGAAGACTGTGCAGGAGGAGGAGCAGCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGGCATAGAGGTCCCTaGAGAGGACAGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRRHRGP*RGQQTH
Trigger: ATGAGTTTGCTGTCCTCTGCAGGGACCTCTATGCCT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGGCATAGAGGTCCCTaGAGAGGACAGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRHRGP*RGQQTH
Trigger: ATGAGTTTGCTGTCCTCTGCAGGGACCTCTATGCCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCCCACTTCAGGCCCTTaGTTTAAGCCACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFPTSGP*FKPPSF
Trigger: GAAAGAAGGTGGCTTAAAGCAAGGGCCTGAAGTGGG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCCACTTCAGGCCCTTaGTTTAAGCCACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPTSGP*FKPPSF
Trigger: GAAAGAAGGTGGCTTAAAGCAAGGGCCTGAAGTGGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCTCTCCATAGAGACCTaGCTCTGGTCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLSIET*LWSQLL
Trigger: GAGGAGCTGGGACCAGAGCCAGGTCTCTATGGAGAG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCATCTCGTCCTCTGGTaGCTGGAAGTAGGCTATCAA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRHLVLW*LEVGYQ
Trigger: TTGATAGCCTACTTCCAGCCACCAGAGGACGAGATG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTGCATCTCGTCCTCTaGTGGCTGGAAGTAGGCTAT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLHLVL*WLEVGY
Trigger: ATAGCCTACTTCCAGCCACCAGAGGACGAGATGCAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCCCAGGAAGATGTTTaGCCGGATGCTGGTGACATC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSQEDV*PDAGDI
Trigger: GATGTCACCAGCATCCGGCCAAACATCTTCCTGGGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGACTTGAGCAGATGCTaGTTGATGGAAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHDLSRC*LMEATA
Trigger: AGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATCCCCCAAAGCTCGTaGATGTTCTCAGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSIPQSS*MFSASL
Trigger: CAGACTGGCTGAGAACATCCACGAGCTTTGGGGGAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGACGACAGCCTGGCCTaGCCCAGCCAACACGCATGT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSDDSLA*PSQHAC
Trigger: ACATGCGTGTTGGCTGGGCCAGGCCAGGCTGTCGTC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGACGACAGCCTGGCCTaGCCCAGCCAACACGCATGT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVDDSLA*PSQHAC
Trigger: ACATGCGTGTTGGCTGGGCCAGGCCAGGCTGTCGTC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTCAGGACGACAGCCTaGCCTGGCCCAGCCAACACG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVRTTA*PGPANT
Trigger: CGTGTTGGCTGGGCCAGGCCAGGCTGTCGTCCTGAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGCCCCAGAGAGCAAATaGGCACAAAACCGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHAPESK*AQNRSQ
Trigger: TTGAGAACGGTTTTGTGCCCATTTGCTCTCTGGGGC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGCCCCAGAGAGCAAATaGGCACAAAACCGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRAPESK*AQNRSQ
Trigger: TTGAGAACGGTTTTGTGCCCATTTGCTCTCTGGGGC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTCATGCGGCCAATCTaGGATAGCCCCAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFMRPI*DSPREQ
Trigger: TTGCTCTCTGGGGCTATCCCAGATTGGCCGCATGAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACCGAGGTGGACACTGTaGGGTGGGGTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKPRWTL*GGVLLF
Trigger: GAAGAGAAGAACCCCACCCCACAGTGTCCACCTCGG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTCTCCTCAGGGATGTaGAGTGCCATCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFSSGM*SAIICR
Trigger: CCTGCAGATGATGGCACTCCACATCCCTGAGGAGAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGGTCTCGGATGTaGGCCCCGCTACAGTGCACG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVTGSRM*APLQCT
Trigger: CGTGCACTGTAGCGGGGCCCACATCCGAGACCCTGT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATCAGGAGGAGAATCTaGCGAACATCATCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFIRRRI*RTSSSS
Trigger: CGACGACGATGATGTTCGCCAGATTCTCCTCCTGAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGTCTTCCGCAGAGCCTaGAGCAACTCCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKVFRRA*SNSPML
Trigger: CAGCATTGGGGAGTTGCTCCAGGCTCTGCGGAAGAC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGTCTTCCGCAGAGCCTaGAGCAACTCCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSVFRRA*SNSPML
Trigger: CAGCATTGGGGAGTTGCTCCAGGCTCTGCGGAAGAC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGCTGCCACATCCAGTaGGGTGGACCCCCTCATCGA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGCHIQ*GGPPHR
Trigger: TCGATGAGGGGGTCCACCCCACTGGATGTGGCAGCC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTCACCCCTCAGAGCTaGGCCGAAGCACTCGGGACG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFTPQS*AEALGT
Trigger: CGTCCCGAGTGCTTCGGCCCAGCTCTGAGGGGTGAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACAACCAGGTCTTCCGTaGGGACCAGGGAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVQPGLP*GPGSAG
Trigger: TCCTGCGCTCCCTGGTCCCCACGGAAGACCTGGTTG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGTCAGGGCAGAAGTTaGCCGCCATGTCTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGQGRS*PPCLAR
Trigger: GCGAGCCAGACATGGCGGCCAACTTCTGCCCTGACC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGTCAGGGCAGAAGTTaGCCGCCATGTCTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGQGRS*PPCLAR
Trigger: GCGAGCCAGACATGGCGGCCAACTTCTGCCCTGACC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAACCATGGGTGCCTTGTaGTCAGGGCAGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKTMGAL*SGQKLA
Trigger: GGCCAACTTCTGCCCTGACCACAAGGCACCCATGGT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGGCTTCTCCTTCTTTaGTCCTTTCCACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRLLLL*SFPLSS
Trigger: GCTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGGTACCAAAAGCGGGTaGCTGCCACCACCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKGTKSG*LPPPLL
Trigger: AAGCAAGGGTGGTGGCAGCCACCCGCTTTTGGTACC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAATTTGAACAGGTCCTaGGCCTTCTCTCGATCCCTG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHNLNRS*AFSRSL
Trigger: CAGGGATCGAGAGAAGGCCCAGGACCTGTTCAAATT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAATTTGAACAGGTCCTaGGCCTTCTCTCGATCCCTG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFNLNRS*AFSRSL
Trigger: CAGGGATCGAGAGAAGGCCCAGGACCTGTTCAAATT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAATTTGAACAGGTCCTaGGCCTTCTCTCGATCCCTG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRNLNRS*AFSRSL
Trigger: CAGGGATCGAGAGAAGGCCCAGGACCTGTTCAAATT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTACTGGTCGACCAGTaGGAGGAGAACTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVLVDQ*EENFGK
Trigger: TTTGCCAAAGTTCTCCTCCCACTGGTCGACCAGTAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGGAAATACAGGCGGTaGTTGGTGAAGTACTGGTCG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRKYRR*LVKYWS
Trigger: CGACCAGTACTTCACCAACCACCGCCTGTATTTCCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGGAAATACAGGCGGTaGTTGGTGAAGTACTGGTCG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRKYRR*LVKYWS
Trigger: CGACCAGTACTTCACCAACCACCGCCTGTATTTCCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTGCGTTCGGGAATaGGTAAACTTCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRICVRE*VNFPSF
Trigger: GAAGCTGGGGAAGTTTACCCATTCCCGAACGCAGAT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGATGGATGTCAGGATaGGAAGCAGAGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRWMSG*EAEPLW
Trigger: CCACAGTGGCTCTGCTTCCCATCCTGACATCCATCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGCAGGGTCCTGTGCTaGGGGGCAGGTTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSRVLC*GAGSQV
Trigger: GACCTGAGAACCTGCCCCCCAGCACAGGACCCTGCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTGCTGATAATTGGCTaGGCATACACTGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLLIIG*AYTAMR
Trigger: GCGCATCGCAGTGTATGCCCAGCCAATTATCAGCAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGTGAGATGAGCTCCTaGTCGCCTGGAGTACACATG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSEMSS*SPGVHM
Trigger: CATGTGTACTCCAGGCGACCAGGAGCTCATCTCACT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGCCTCCGTTCAGAATaGCAATCCCCAGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDCLRSE*QSPASV
Trigger: CACTGAAGCTGGGGATTGCCATTCTGAACGGAGGCA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAATGTACTTGGCTTCTaGGGTGGGTTCCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHNVLGF*GGFQEA
Trigger: TGCTTCTTGGAACCCACCTCAGAAGCCAAGTACATT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAATGTACTTGGCTTCTaGGGTGGGTTCCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFNVLGF*GGFQEA
Trigger: TGCTTCTTGGAACCCACCTCAGAAGCCAAGTACATT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCTCCTTGATTTCCTTTaGTGCTCGGAAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDLLDFL*CSEGEG
Trigger: GCCTTCTCCTTCCGAGCATCAAAGGAAATCAAGGAG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCAGAATCCCCGTACTTaGTTTCTGGAACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSQNPRT*FLELPC
Trigger: GCATGGGAGTTCCAGAAATCAAGTACGGGGATTCTG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCCATGTGGCCTTCCTaGTGGAGTATGACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSMWPS*WSMTFL
Trigger: AAGAAAGGTCATACTCCATCAGGAAGGCCACATGGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCCATGTGGCCTTCCTaGTGGAGTATGACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSMWPS*WSMTFL
Trigger: AAGAAAGGTCATACTCCATCAGGAAGGCCACATGGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCGGTTGTGTTCCGGATaGTGCGAGCAGCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRLCSG*CEQPGT
Trigger: AGTCCCAGGCTGCTCGCATCATCCGGAACACAACCG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTTCTTGTACTGTGGTaGACCTTCAGCAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLLVLW*TFSNSQ
Trigger: CTGGGAGTTGCTGAAGGTTCACCACAGTACAAGAAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCTGGGTATCCGTCCTaGCCACAGATGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSGYPS*PQMKPI
Trigger: GATGGGCTTCATCTGTGGTCAGGACGGATACCCAGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGCACAGGTTGTCCATTaGTTCGGAAAGAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFAQVVH*FGKKCW
Trigger: CCAGCATTTCTTTCCGAATCAATGGACAACCTGTGC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGCAAGGGGCATAGCCTaGGGGAGGCAGGAACTTAAA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSARGIA*GRQELK
Trigger: TTTAAGTTCCTGCCTCCCTCAGGCTATGCCCCTTGC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGTTTCAGGGAGCTTTaGAAACTCCACAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSFREL*KLHKAG
Trigger: CCCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGTTTCAGGGAGCTTTaGAAACTCCACAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSFREL*KLHKAG
Trigger: CCCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTACCTCTATGTGGGGATaGTCCTTAGGCACATTCACA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFTSMWG*SLGTFT
Trigger: TGTGAATGTGCCTAAGGATCATCCCCACATAGAGGT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACCTCTATGTGGGGATaGTCCTTAGGCACATTCACA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTSMWG*SLGTFT
Trigger: TGTGAATGTGCCTAAGGATCATCCCCACATAGAGGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTTCATCTCCCAGGGTaGCAGTCACAGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFHLPG*QSQCSF
Trigger: AAAACTGCACTGTGACTGTCACCCTGGGAGATGAAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTACATTGCTCCGACTTaGTCTTTGGGAACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHYIAPT*SLGTGY
Trigger: GTAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTCCTTCCCATTAGCTaGGAAGGACAACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFLPIS*EGQHAH
Trigger: ATGGGCATGTTGTCCTTCTCAGCTAATGGGAAGGAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGCGTAGAAGAGCTGTaGGAGGTCCACGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGVEEL*EVHVAA
Trigger: TGCAGCCACGTGGACCTCTCACAGCTCTTCTACGCC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCTAACAAGGTTCCAATaGGTTTCAGCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLTRFQ*VSAQAR
Trigger: TCGTGCCTGTGCTGAAACTCATTGGAACCTTGTTAG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTAACAAGGTTCCAATaGGTTTCAGCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLTRFQ*VSAQAR
Trigger: TCGTGCCTGTGCTGAAACTCATTGGAACCTTGTTAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTCTCCGAAGGAGGTTaGACATCATCCTCACCAGTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVSEGG*TSSSPV
Trigger: AACTGGTGAGGATGATGTTCAACCTCCTTCGGAGAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCAGTACCCAGCACATTaGCCATCACTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDQYPAH*PSLPSQ
Trigger: CTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCTCCATCATCCTGTGTaGCTTCTGTCTTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLHHPV*LLSCNP
Trigger: AGGGTTACAAGACAGAAGTCACACAGGATGATGGAG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACAGCCTCTGTGGTGCTaGGGGACACTGTATCTAGAG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKQPLWC*GTLYLE
Trigger: CTCTAGATACAGTGTCCCTCAGCACCACAGAGGCTG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGAAGAGCTTCTCAGTaGGGTGCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRRASQ*GAAPPP
Trigger: TGGAGGAGGAGCTGCACCTCACTGAGAAGCTCTTCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCCATCTGCATCCACTaGGACCTGCTTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSICIH*DLLLQC
Trigger: ACATTGGAGAAGCAGGTCTCAGTGGATGCAGATGGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACATACCCACTGCTGCTaGGCGGCTTCAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVHTHCC*AASEET
Trigger: CGTCTCCTCTGAAGCCGCTCAGCAGCAGTGGGTATG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTTGGTGTTGAAGACTaGGAGGGGATTGTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFGVED*EGIVAV
Trigger: AACCGCCACAATCCCCTCTCAGTCTTCAACACCAAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTACTCGGCCAAGTCATTaGTTTCCTTCATCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFTRPSH*FPSSGL
Trigger: AAGGCCTGATGAAGGAAATCAATGACTTGGCCGAGT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGTGTACCGGGCACCTaGCTCGGCCAAGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSVPGT*LGQVID
Trigger: ATCAATGACTTGGCCGAGTCAGGTGCCCGGTACACT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGCAAGATCACTTCAATaGCATGGGGCATCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFARSLQ*HGASQC
Trigger: ACACTGAGATGCCCCATGTCATTGAAGTGATCTTGC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGCAAGATCACTTCAATaGCATGGGGCATCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHARSLQ*HGASQC
Trigger: ACACTGAGATGCCCCATGTCATTGAAGTGATCTTGC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGCAAGATCACTTCAATaGCATGGGGCATCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRARSLQ*HGASQC
Trigger: ACACTGAGATGCCCCATGTCATTGAAGTGATCTTGC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCAAACTCATCTAGGATaGGGAGCTCAGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSQTHLG*GAQPPG
Trigger: CCCAGGAGGCTGAGCTCCTCATCCTAGATGAGTTTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATTTACACCACAGAATaGAGACCTCGGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSIYTTE*RPRPPC
Trigger: GCATGGTGGCCGAGGTCTTCATTCTGTGGTGTAAAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTATTTTGCGAGTGAGATaGGCTCCTGGTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSILRVR*APGRLE
Trigger: CTCCAGGCGACCAGGAGCTCATCTCACTCGCAAAAT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCTGGCACTTATCATCTaGAGGACCATCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDLALII*RTISAA
Trigger: TGCTGCAGAGATGGTCCTTCAGATGATAAGTGCCAG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTGGCACTTATCATCTaGAGGACCATCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLALII*RTISAA
Trigger: TGCTGCAGAGATGGTCCTTCAGATGATAAGTGCCAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATAACACTGCCACATTaGACCCTATGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFITLPH*TLCPWL
Trigger: CAGCCAAGGACATAGGGTTCAATGTGGCAGTGTTAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGGAGAAGAACACCTTaGCCAGTTCCTTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRRRTP*PVPLHS
Trigger: TGAGTGCAAAGGAACTGGTCAAGGTGTTCTTCTCCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTGTGAAGAGCAACTaGAAGAGGCCCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRIVKSN*KRPTNS
Trigger: GCTGTTTGTGGGCCTCTTTCAGTTGCTCTTCACAAT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATTGTGAAGAGCAACTaGAAGAGGCCCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFIVKSN*KRPTNS
Trigger: GCTGTTTGTGGGCCTCTTTCAGTTGCTCTTCACAAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACCCAAGTCCCTCGGCTaGCAGGCAGAACTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTPKSLG*QAELPL
Trigger: CAGCGGAAGTTCTGCCTGGCAGCCGAGGGACTTGGG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTTCCAGCACGAAATTaGAGACACAGAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVPARN*RHRDLE
Trigger: CTCCAGATCTCTGTGTCTGCAATTTCGTGCTGGAAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTTCTTTCCAGGCCATaGCACTCTCTTCCCTTACGA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFLSRP*HSLPLR
Trigger: TCGTAAGGGAAGAGAGTGGCATGGCCTGGAAAGAAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTACTGCAACCCCATTaGAGAGACAGAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDLLQPH*RDRGST
Trigger: TGTGCTCCCTCTGTCTCTGCAATGGGGTTGCAGTAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTACTGCAACCCCATTaGAGAGACAGAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLLQPH*RDRGST
Trigger: TGTGCTCCCTCTGTCTCTGCAATGGGGTTGCAGTAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTAATTAGTCGTGTCTaGAGAAGCAGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLISRV*RSRFLR
Trigger: CCGGAGGAACCTGCTTCTGCAGACACGACTAATTAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGATCATGTTGGCATTaGTGTTCTGTGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRSCWH*CSVCRR
Trigger: CCTTCGGCACACAGAACAGCAATGCCAACATGATCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGGGGTTCTAGGCACTaGACCACCCAGCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRGSRH*TTQPWR
Trigger: GCGCCATGGCTGGGTGGTGCAGTGCCTAGAACCCCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCTCAGGGATGTGGAGTaGCATCATCTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLRDVE*HHLQGF
Trigger: GAACCCCTGCAGATGATGGCACTCCACATCCCTGAG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGAGGTCCACGTGGCTaGACAGGGCAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSRGPRG*TGQKPL
Trigger: GAGTGGCTTCTGCCCTGTGCAGCCACGTGGACCTCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGAGGTCCACGTGGCTaGACAGGGCAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRGPRG*TGQKPL
Trigger: GAGTGGCTTCTGCCCTGTGCAGCCACGTGGACCTCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCACTGCCTTTTCCTCTaGGTGGGTCACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFHCLFL*VGHFFF
Trigger: GAAAAAGAAGTGACCCACGCAGAGGAAAAGGCAGTG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTCTCCAGCCTCCACTaGCTTTTCCTCTGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFSSLH*LFLCVG
Trigger: ACCCACGCAGAGGAAAAGGCAGTGGAGGCTGGAGAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGCGGAACTTCTGATTTaGCTGCAGCTTGGACACGTA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDAELLI*LQLGHV
Trigger: TACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCACAGTCTCATGCATaGCGAGGACTCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSQSHA*RGLSSG
Trigger: ACCTGATGAGAGTCCTCGGCATGCATGAGACTGTGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGAACAGCACCATGGGTaGCTTGTGGTCAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKEQHHG*LVVRAE
Trigger: TTCTGCCCTGACCACAAGGCACCCATGGTGCTGTTC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGACGACGCAGGAGTTaGTGTAACATGGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRRRRS*CNMEGL
Trigger: GAGACCTTCCATGTTACAGCAACTCCTGCGTCGTCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCTGGGTGTCCCCCTTaGCATCGGTCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPGCPP*HRSSAA
Trigger: AGCAGCTGAAGACCGATGGCAAGGGGGACACCCAGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACCTGGGTGTCCCCCTTaGCATCGGTCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVPGCPP*HRSSAA
Trigger: AGCAGCTGAAGACCGATGGCAAGGGGGACACCCAGG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGACCTCGGCCACCATaGGGAAGAGCTGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRPRPP*GRAGQN
Trigger: ATTCTGACCAGCTCTTCCGCATGGTGGCCGAGGTCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGACCTCGGCCACCATaGGGAAGAGCTGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSRPRPP*GRAGQN
Trigger: ATTCTGACCAGCTCTTCCGCATGGTGGCCGAGGTCT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGACTTCTCCTGCAGGTaGAGGTTATTCCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFDFSCR*RLFRRC
Trigger: ACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGACTTCTCCTGCAGGTaGAGGTTATTCCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRDFSCR*RLFRRC
Trigger: ACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGACTTCTCCTGCAGGTaGAGGTTATTCCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHDFSCR*RLFRRC
Trigger: ACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAAAGGCTGTTCCACCTaGTCAAGGTGGAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDKGCST*SRWKRA
Trigger: AGCTCTCTTCCACCTTGAGCAGGTGGAACAGCCTTT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCTAGCATTTTCTGTTaGACACCAGCATTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSSIFC*TPALPP
Trigger: CGGAGGCAATGCTGGTGTGCAACAGAAAATGCTAGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCCACTTCAGGCCCTTaGTTTAAGCCACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPTSGP*FKPPSF
Trigger: GAAAGAAGGTGGCTTAAAGCAAGGGCCTGAAGTGGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCATCTCTGCTGCCTGTaGTTTTCTTTTCTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHHLCCL*FSFLPH
Trigger: GTGCGGAAGAAAAGAAAAGCACAGGCAGCAGAGATG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCATCTCTGCTGCCTGTaGTTTTCTTTTCTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRHLCCL*FSFLPH
Trigger: GTGCGGAAGAAAAGAAAAGCACAGGCAGCAGAGATG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCTTTACTGTCACGTCTaGCCACAGGTAGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFLYCHV*PQVVCL
Trigger: CAAACAGACTACCTGTGGGCAGACGTGACAGTAAAG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCAATTTCATCACCAATaGCTCCACCTGCTCTTACGC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHQFHHQ*LHLLLR
Trigger: GCGTAAGAGCAGGTGGAGGCATTGGTGATGAAATTG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACGGAGTCGGAAGGCCTaGCCCCACCTGATGTTACTG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRSRKA*PHLMLL
Trigger: CAGTAACATCAGGTGGGGCCAGGCCTTCCGACTCCG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTGTAGAAGAAGGCCTTaGTCTTCTGTCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFCRRRP*SSVKAK
Trigger: CTTGGCCTTGACAGAAGACCAAGGCCTTCTTCTACA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTGTAGAAGAAGGCCTTaGTCTTCTGTCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHCRRRP*SSVKAK
Trigger: CTTGGCCTTGACAGAAGACCAAGGCCTTCTTCTACA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGAAGGAGAAGGCTGTaGATTTGGTGTCGGATTTTC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGRRRL*IWCRIF
Trigger: GAAAATCCGACACCAAATCCACAGCCTTCTCCTTCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCAGGCGGGAAGTTTTaGCATCTTGTGCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPGGKF*HLVLCR
Trigger: CCTACAAAGCACAAGATGCCAAAACTTCCCGCCTGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCATCTCGTCCTCTGGTaGCTGGAAGTAGGCTATCAA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSHLVLW*LEVGYQ
Trigger: TTGATAGCCTACTTCCAGCCACCAGAGGACGAGATG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCATCTCGTCCTCTGGTaGCTGGAAGTAGGCTATCAA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDHLVLW*LEVGYQ
Trigger: TTGATAGCCTACTTCCAGCCACCAGAGGACGAGATG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTGCATCTCGTCCTCTaGTGGCTGGAAGTAGGCTAT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLHLVL*WLEVGY
Trigger: ATAGCCTACTTCCAGCCACCAGAGGACGAGATGCAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGGAGAGGAACTGTGTaGTACCCAATAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGRGTV*YPIDLS
Trigger: TGAGAGATCTATTGGGTACCACACAGTTCCTCTCCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGTATCTATGGGACATaGGATGAAAGAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGIYGT*DERGLG
Trigger: TCCCAAGCCTCTTTCATCCCATGTCCCATAGATACC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGTATCTATGGGACATaGGATGAAAGAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGIYGT*DERGLG
Trigger: TCCCAAGCCTCTTTCATCCCATGTCCCATAGATACC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGACGACAGCCTGGCCTaGCCCAGCCAACACGCATGT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTDDSLA*PSQHAC
Trigger: ACATGCGTGTTGGCTGGGCCAGGCCAGGCTGTCGTC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCCCGACCACATCTCCTaGCTGCCAAGTTCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSPDHIS*LPSSSK
Trigger: TTTGGACGAACTTGGCAGCCAGGAGATGTGGTCGGG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATGGAGGGCTGTCCATaGTGCCATCAATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHMEGCP*CHQFSQ
Trigger: TTGTGAGAATTGATGGCACCATGGACAGCCCTCCAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTGATCTTTGGGAACTaGCTACAATATCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFLIFGN*LQYPHP
Trigger: GGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTAGCATTGGCCAGGTaGATGCTAATGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLALAR*MLMSRS
Trigger: TGACCTGCTCATTAGCATCCACCTGGCCAATGCTAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTAGCATTGGCCAGGTaGATGCTAATGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLALAR*MLMSRS
Trigger: TGACCTGCTCATTAGCATCCACCTGGCCAATGCTAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATCAGGAGGAGAATCTaGCGAACATCATCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSIRRRI*RTSSSS
Trigger: CGACGACGATGATGTTCGCCAGATTCTCCTCCTGAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACTCTCTTGTCTTTCTaGCAGTTAGGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTLLSF*QLGLQT
Trigger: TGTCTGCAGCCCTAACTGCCAGAAAGACAAGAGAGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTACTCTCTTGTCTTTCTaGCAGTTAGGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFTLLSF*QLGLQT
Trigger: TGTCTGCAGCCCTAACTGCCAGAAAGACAAGAGAGT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTCTCGGATCTCCTCTaGGCAGGGGCAGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLSDLL*AGAVLS
Trigger: GGAGAGAACTGCCCCTGCCCAGAGGAGATCCGAGAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCTCTCGGATCTCCTCTaGGCAGGGGCAGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLSDLL*AGAVLS
Trigger: GGAGAGAACTGCCCCTGCCCAGAGGAGATCCGAGAG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTACCAGAAGGTCCTCATaGAAGTCATACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFTRRSS*KSYSSS
Trigger: AGAGGAGCTGTATGACTTCCATGAGGACCTTCTGGT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGCTAGCAACCATCTTTaGGAAGGCAATCTGCGACTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHASNHL*EGNLRL
Trigger: AAGTCGCAGATTGCCTTCCCAAAGATGGTTGCTAGC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGCTGCCACATCCAGTaGGGTGGACCCCCTCATCGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGCHIQ*GGPPHR
Trigger: TCGATGAGGGGGTCCACCCCACTGGATGTGGCAGCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGCTGCCACATCCAGTaGGGTGGACCCCCTCATCGA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGCHIQ*GGPPHR
Trigger: TCGATGAGGGGGTCCACCCCACTGGATGTGGCAGCC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGCGCTCCCCTTCGATaGGGTTCCAGCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSAPLR*GSSQRQ
Trigger: CTGACGTTGGCTGGAACCCCATCGAAGGGGAGCGCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTCACCCCTCAGAGCTaGGCCGAAGCACTCGGGACG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFTPQS*AEALGT
Trigger: CGTCCCGAGTGCTTCGGCCCAGCTCTGAGGGGTGAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACCAGGGAGCGCAGGATaGACCGGATCCGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTPGSAG*TGSGWL
Trigger: AAGCCATCCGGATCCGGTCCATCCTGCGCTCCCTGG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCAACCAGGTCTTCCGTaGGGACCAGGGAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIQPGLP*GPGSAG
Trigger: TCCTGCGCTCCCTGGTCCCCACGGAAGACCTGGTTG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGGCTTCTCCTTCTTTaGTCCTTTCCACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRLLLL*SFPLSS
Trigger: GCTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGTCAAGGTGTCATATaGTACCAAAAGCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSQGVI*YQKRVA
Trigger: AGCCACCCGCTTTTGGTACCATATGACACCTTGACT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGTACTGGTCGACCAGTaGGAGGAGAACTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSVLVDQ*EENFGK
Trigger: TTTGCCAAAGTTCTCCTCCCACTGGTCGACCAGTAC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACATCTGCGTTCGGGAATaGGTAAACTTCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDICVRE*VNFPSF
Trigger: GAAGCTGGGGAAGTTTACCCATTCCCGAACGCAGAT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCGATGTGCTCAAAGATaGATGTCAGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRRCAQR*MSGWEA
Trigger: TGCTTCCCATCCTGACATCCATCTTTGAGCACATCG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGATGTGCTCAAAGATaGATGTCAGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRCAQR*MSGWEA
Trigger: TGCTTCCCATCCTGACATCCATCTTTGAGCACATCG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGTCCTCCACCTTGTCTaGCATCCCCAGAATAGAGCG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKVLHLV*HPQNRA
Trigger: CGCTCTATTCTGGGGATGCCAGACAAGGTGGAGGAC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCACTTCAATGACATaGGGCATCTCAGTGTACCGG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRITSMT*GISVYR
Trigger: CCGGTACACTGAGATGCCCCATGTCATTGAAGTGAT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATCACTTCAATGACATaGGGCATCTCAGTGTACCGG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFITSMT*GISVYR
Trigger: CCGGTACACTGAGATGCCCCATGTCATTGAAGTGAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGCAGGGTCCTGTGCTaGGGGGCAGGTTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISRVLC*GAGSQV
Trigger: GACCTGAGAACCTGCCCCCCAGCACAGGACCCTGCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTGCTGATAATTGGCTaGGCATACACTGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLLIIG*AYTAMR
Trigger: GCGCATCGCAGTGTATGCCCAGCCAATTATCAGCAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGCTTTGCTGATAATTaGCTGGGCATACACTGCGAT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGFADN*LGIHCD
Trigger: ATCGCAGTGTATGCCCAGCCAATTATCAGCAAAGCC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGCTTTGCTGATAATTaGCTGGGCATACACTGCGAT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGFADN*LGIHCD
Trigger: ATCGCAGTGTATGCCCAGCCAATTATCAGCAAAGCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGGGTGGGGATGAAGTaGCTTCGAAGCAGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSRVGMK*LRSRSG
Trigger: GCCCGACCTGCTTCGAAGCCACTTCATCCCCACCCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCATAGCGGATCAGCATaGGGTAGAAGGCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSHSGSA*GRRHRG
Trigger: ACCTCTATGCCTTCTACCCCATGCTGATCCGCTATG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTCTTCTTCCGTTCCTaGTCCTGTCCTCCAGACTTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVFFRS*SCPPDF
Trigger: AAAGTCTGGAGGACAGGACCAGGAACGGAAGAAGAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCACTCTGACAGCTCTTaGCCATCATGCTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSHSDSS*PSCWNR
Trigger: CCTATTCCAGCATGATGGCCAAGAGCTGTCAGAGTG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCACTCTGACAGCTCTTaGCCATCATGCTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDHSDSS*PSCWNR
Trigger: CCTATTCCAGCATGATGGCCAAGAGCTGTCAGAGTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGCAGCTCGATCTGACTaGAATCCTGAGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRAARSD*NPEKAS
Trigger: TGAAGCTTTCTCAGGATTCCAGTCAGATCGAGCTGC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGCAGCTCGATCTGACTaGAATCCTGAGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFAARSD*NPEKAS
Trigger: TGAAGCTTTCTCAGGATTCCAGTCAGATCGAGCTGC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCCTTGGCTGGCTCATaGAACCTCTCTACAAAATCC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSLAGS*NLSTKS
Trigger: GGATTTTGTAGAGAGGTTCCATGAGCCAGCCAAGGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCCTTGGCTGGCTCATaGAACCTCTCTACAAAATCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSLAGS*NLSTKS
Trigger: GGATTTTGTAGAGAGGTTCCATGAGCCAGCCAAGGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCCTTGGCTGGCTCATaGAACCTCTCTACAAAATCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSLAGS*NLSTKS
Trigger: GGATTTTGTAGAGAGGTTCCATGAGCCAGCCAAGGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCACCCTTTACAAAGTaGACCAGCTCAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSPFTK*TSSVVT
Trigger: TGTCACCACTGAGCTGGTCCACTTTGTAAAGGGTGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCACCCTTTACAAAGTaGACCAGCTCAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSPFTK*TSSVVT
Trigger: TGTCACCACTGAGCTGGTCCACTTTGTAAAGGGTGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAATGTACTTGGCTTCTaGGGTGGGTTCCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDNVLGF*GGFQEA
Trigger: TGCTTCTTGGAACCCACCTCAGAAGCCAAGTACATT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTCTTGCAGTGCTCTaGCAGATAAGGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFLAVL*QIRTVP
Trigger: TGGAACAGTCCTTATCTGTCAGAGCACTGCAAGAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTTCTTGCAGTGCTCTaGCAGATAAGGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFLAVL*QIRTVP
Trigger: TGGAACAGTCCTTATCTGTCAGAGCACTGCAAGAAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTCAATGCTACTTCCTaGGCAGGTAGGATGTACGTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFNATS*AGRMYV
Trigger: AACGTACATCCTACCTGCTCAGGAAGTAGCATTGAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCGGTTGTGTTCCGGATaGTGCGAGCAGCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRLCSG*CEQPGT
Trigger: AGTCCCAGGCTGCTCGCATCATCCGGAACACAACCG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGCAGCTGGGTTAACATaGGCAATGTGGCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSAAGLT*AMWHPR
Trigger: CCTGGGGTGCCACATTGCTCATGTTAACCCAGCTGC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGCAGCTGGGTTAACATaGGCAATGTGGCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVAAGLT*AMWHPR
Trigger: CCTGGGGTGCCACATTGCTCATGTTAACCCAGCTGC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCAAACACGAAGGCTTaGTCATCAGCCCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSNTKA*SSAPSS
Trigger: TGAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTTCATCTCCCAGGGTaGCAGTCACAGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFHLPG*QSQCSF
Trigger: AAAACTGCACTGTGACTGTCACCCTGGGAGATGAAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTACATTGCTCCGACTTaGTCTTTGGGAACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSYIAPT*SLGTGY
Trigger: GTAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGACGTGCTGGTAGGCTaGAGGAAGACTGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSDVLVG*RKTAGN
Trigger: GTTCCCTGCAGTCTTCCTTCAGCCTACCAGCACGTC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGACGTGCTGGTAGGCTaGAGGAAGACTGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKDVLVG*RKTAGN
Trigger: GTTCCCTGCAGTCTTCCTTCAGCCTACCAGCACGTC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGCGTAGAAGAGCTGTaGGAGGTCCACGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGVEEL*EVHVAA
Trigger: TGCAGCCACGTGGACCTCTCACAGCTCTTCTACGCC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCAGGGCTTTTGTCTTaGGAATCTGCAAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSGLLS*ESARES
Trigger: AGATTCCCTTGCAGATTCTCAAGACAAAAGCCCTGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCTAACAAGGTTCCAATaGGTTTCAGCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDLTRFQ*VSAQAR
Trigger: TCGTGCCTGTGCTGAAACTCATTGGAACCTTGTTAG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCTGCAGCAAGCCTTTaGCTGGAGCCTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSAASL*LEPPCR
Trigger: CCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCTGCAGCAAGCCTTTaGCTGGAGCCTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSAASL*LEPPCR
Trigger: CCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCGCACATCTGCAGCTTaGCAGACTCAGGCAATCGGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSRTSAA*QTQAIG
Trigger: CCCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATGTTCAGGGCCTGCATaGGCTCATTGTAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKCSGPA*AHCSGT
Trigger: AGTTCCGCTACAATGAGCTCATGCAGGCCCTGAACA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCACAGAGGCCTGGCTaGTGGTGTAGGTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSQRPG*WCRSSA
Trigger: TGCGGAAGACCTACACCATCAGCCAGGCCTCTGTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCAAACATGGCCTTCTaGTTTTGCCGGCTAATTCGA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSNMAF*FCRLIR
Trigger: TCGAATTAGCCGGCAAAATCAGAAGGCCATGTTTGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCTCCATCATCCTGTGTaGCTTCTGTCTTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDLHHPV*LLSCNP
Trigger: AGGGTTACAAGACAGAAGTCACACAGGATGATGGAG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCTCTGTTAATGTCTTaGAGGGCCGTATTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSLLMS*RAVLVG
Trigger: ACCCACTAATACGGCCCTTCAAGACATTAACAGAGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGACAGCACAACATTTaGGAGATCCAGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGQHNI*EIQRGG
Trigger: CCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGACAGCACAACATTTaGGAGATCCAGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGQHNI*EIQRGG
Trigger: CCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGACAGCACAACATTTaGGAGATCCAGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGQHNI*EIQRGG
Trigger: CCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGACCTCCACCATTCCCTaGAGCTCCCTGGACAGCACA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKTSTIP*SSLDST
Trigger: TGTGCTGTCCAGGGAGCTTCAGGGAATGGTGGAGGT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACATACCCACTGCTGCTaGGCGGCTTCAGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTHTHCC*AASEET
Trigger: CGTCTCCTCTGAAGCCGCTCAGCAGCAGTGGGTATG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATCGCTCCCAAAGAGTaGAATCCTGTGTCTAACAAG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHIAPKE*NPVSNK
Trigger: CTTGTTAGACACAGGATTTCACTCTTTGGGAGCGAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATCGCTCCCAAAGAGTaGAATCCTGTGTCTAACAAG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFIAPKE*NPVSNK
Trigger: CTTGTTAGACACAGGATTTCACTCTTTGGGAGCGAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACACTCGGCCAAGTCATTaGTTTCCTTCATCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDTRPSH*FPSSGL
Trigger: AAGGCCTGATGAAGGAAATCAATGACTTGGCCGAGT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCTCCAGGGTGGGGATaGAGTGGCTTCGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSPGWG*SGFEAG
Trigger: ACCTGCTTCGAAGCCACTTCATCCCCACCCTGGAGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCTCCAGGGTGGGGATaGAGTGGCTTCGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSPGWG*SGFEAG
Trigger: ACCTGCTTCGAAGCCACTTCATCCCCACCCTGGAGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCCGTTTCCGTTGCTTTaGCAACAATTTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFPFPLL*QQFVPY
Trigger: GTATGGCACAAATTGTTGTCAAAGCAACGGAAACGG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGAGGGGAGCCATCCTaGAACAGGCCACCACTGCCC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRGEPS*NRPPLP
Trigger: GGGCAGTGGTGGCCTGTTTCAGGATGGCTCCCCTCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTCCTCAGGAAGTTCTaGAAGTCACTGTTATGTCCT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVLRKF*KSLLCP
Trigger: AGGACATAACAGTGACTTTCAGAACTTCCTGAGGAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACCAATAGAAATCGCTaGTTGATTCCTGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTNRNR*LIPADA
Trigger: TGCGTCTGCAGGAATCAATCAGCGATTTCTATTGGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCTTCCATGGCCTTCTaGAATTCTTTTCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPSMAF*NSFREM
Trigger: CATCTCTCGAAAAGAATTTCAGAAGGCCATGGAAGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCTTCCATGGCCTTCTaGAATTCTTTTCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPSMAF*NSFREM
Trigger: CATCTCTCGAAAAGAATTTCAGAAGGCCATGGAAGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGGAGAAGAACACCTTaGCCAGTTCCTTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRRRTP*PVPLHS
Trigger: TGAGTGCAAAGGAACTGGTCAAGGTGTTCTTCTCCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGACCAGCTCAGTGGTaGCACCTGGCTCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGPAQW*HLAQSL
Trigger: AAGTGACTGAGCCAGGTGTCACCACTGAGCTGGTCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGACCAGCTCAGTGGTaGCACCTGGCTCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGPAQW*HLAQSL
Trigger: AAGTGACTGAGCCAGGTGTCACCACTGAGCTGGTCC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCAAAGAGGTCTGACATaGTGTCTGTATCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDQRGLT*CLYLLP
Trigger: AGGCAGGAGATACAGACATCATGTCAGACCTCTTTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGATTCCAAAGAGGTCTaGCATGATGTCTGTATCTCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFDSKEV*HDVCIS
Trigger: GGAGATACAGACATCATGTCAGACCTCTTTGGAATC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGATTCCAAAGAGGTCTaGCATGATGTCTGTATCTCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHDSKEV*HDVCIS
Trigger: GGAGATACAGACATCATGTCAGACCTCTTTGGAATC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCAGATGGCTGTTCAGTaGTATAGAGGCCATCAAACT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRQMAVQ*YRGHQT
Trigger: AGTTTGATGGCCTCTATATCACTGAACAGCCATCTG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGTCCCACTGCCCCTTaGTGTCATCCTCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGPTAP*CHPQMA
Trigger: AGCCATCTGAGGATGACATCAAGGGGCAGTGGGACC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATTGTGAGTTACAGATaGCAGGATCGTCCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHIVSYR*QDRPQG
Trigger: ACCTTGAGGACGATCCTGTCATCTGTAACTCACAAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCTGTCCTCCAGATTTTaGCATCTTGCTTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLSSRF*HLAFAV
Trigger: GACAGCAAAAGCAAGATGTCAAAATCTGGAGGACAG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTGTCCTCCAGATTTTaGCATCTTGCTTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLSSRF*HLAFAV
Trigger: GACAGCAAAAGCAAGATGTCAAAATCTGGAGGACAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCCAGCACGAAATTaGAGACACAGAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVPARN*RHRDLE
Trigger: CTCCAGATCTCTGTGTCTGCAATTTCGTGCTGGAAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGGCCTGTGGTAAGATaGCGGAGTCGGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTWPVVR*RSRKAW
Trigger: CCAGGCCTTCCGACTCCGGCATCTTACCACAGGCCA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGTTTGTCTTCATGTTaGATCTCGTCCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDCLSSC*ISSSGG
Trigger: GCCACCAGAGGACGAGATGCAACATGAAGACAAACA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTTCTTTCCAGGCCATaGCACTCTCTTCCCTTACGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFLSRP*HSLPLR
Trigger: TCGTAAGGGAAGAGAGTGGCATGGCCTGGAAAGAAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTTCTTTCCAGGCCATaGCACTCTCTTCCCTTACGA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFLSRP*HSLPLR
Trigger: TCGTAAGGGAAGAGAGTGGCATGGCCTGGAAAGAAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTAATTAGTCGTGTCTaGAGAAGCAGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLISRV*RSRFLR
Trigger: CCGGAGGAACCTGCTTCTGCAGACACGACTAATTAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTCAATCTCATAGTCTaGGAAGGCAAGTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLNLIV*EGKFRT
Trigger: GGTTCTGAACTTGCCTTCGCAGACTATGAGATTGAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGATCATGTTGGCATTaGTGTTCTGTGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRSCWH*CSVCRR
Trigger: CCTTCGGCACACAGAACAGCAATGCCAACATGATCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCATGTAGCAGTTGCTaGGTTTCACACTTTCATGGA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPCSSC*VSHFHG
Trigger: TCCATGAAAGTGTGAAACGCAGCAACTGCTACATGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCTGAGAAGGACAACATaGCCATTGCCAGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLRRTT*PLPDLE
Trigger: TTCTAGATCTGGCAATGGGCATGTTGTCCTTCTCAG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGGGGTTCTAGGCACTaGACCACCCAGCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRGSRH*TTQPWR
Trigger: GCGCCATGGCTGGGTGGTGCAGTGCCTAGAACCCCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCTTCCTCTGTTGGCTaGTCCTTCTCAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSSSVG*SFSGLG
Trigger: ACCCAAGCCTGAGAAGGAGCAGCCAACAGAGGAAGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCATCACAGAGGAGGCTaGCACATCCAGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKHHRGG*HIQWGG
Trigger: TCCACCCCACTGGATGTGGCAGCCTCCTCTGTGATG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTATGGTGTCCCTCTGTaGCTTGGTGAGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSYGVPL*LGEGAS
Trigger: GGACGCTCCCTCACCAAGGCACAGAGGGACACCATA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTATGGTGTCCCTCTGTaGCTTGGTGAGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKYGVPL*LGEGAS
Trigger: GGACGCTCCCTCACCAAGGCACAGAGGGACACCATA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCCAAAAGCGGGTGGCTaGCACCACCCTTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSPKAGG*HHPCFP
Trigger: TGGAAAGCAAGGGTGGTGGCAGCCACCCGCTTTTGG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCAAAAGCGGGTGGCTaGCACCACCCTTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPKAGG*HHPCFP
Trigger: TGGAAAGCAAGGGTGGTGGCAGCCACCCGCTTTTGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGCATTTTCAAAGAATaGTCGCAGCCCGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSIFKE*SQPGFH
Trigger: GTGAAAGCCGGGCTGCGAGCATTCTTTGAAAATGCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGAAACACCTTTGATCTaGGTTCGGGAATGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRETPLI*VREWVN
Trigger: GTTTACCCATTCCCGAACGCAGATCAAAGGTGTTTC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGTAGGACAGGTAGTTaGAGAGCATGGGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSRTGS*RAWARS
Trigger: TGATCTTGCCCATGCTCTGCAACTACCTGTCCTACT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGCTGCTCCTCCTCCTaGACAGTCTTCACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSCSSS*TVFTAF
Trigger: GAAGGCGGTGAAGACTGTGCAGGAGGAGGAGCAGCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCATCGGTCTTCAGCTaGTCCTCCTCCTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPSVFS*SSSCTV
Trigger: GACTGTGCAGGAGGAGGAGCAGCTGAAGACCGATGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCCATCGGTCTTCAGCTaGTCCTCCTCCTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSPSVFS*SSSCTV
Trigger: GACTGTGCAGGAGGAGGAGCAGCTGAAGACCGATGG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACTGCCCGTTTCCGTTaGTTTGACAACAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTARFR*FDNNLC
Trigger: GCACAAATTGTTGTCAAAGCAACGGAAACGGGCAGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGCTCTTGGCCATCATaGTGGAATAGGAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSSWPS*WNRKCT
Trigger: TGTACACTTCCTATTCCAGCATGATGGCCAAGAGCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGCTCTTGGCCATCATaGTGGAATAGGAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSSWPS*WNRKCT
Trigger: TGTACACTTCCTATTCCAGCATGATGGCCAAGAGCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCACGCTCGTGCAGCCTTaGTTGTTGATACAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRTLVQP*LLIQCF
Trigger: AAAACACTGTATCAACAAGCAAGGCTGCACGAGCGT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTGAAGGACCATCTCTaGAGCACCACGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLKDHL*STTLVQ
Trigger: CTGCACGAGCGTGGTGCTGCAGAGATGGTCCTTCAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTGAAGGACCATCTCTaGAGCACCACGCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLKDHL*STTLVQ
Trigger: CTGCACGAGCGTGGTGCTGCAGAGATGGTCCTTCAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGCTCATCTCACCTTTaGTGGCACTTATCATCTGAA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGSSHL*WHLSSE
Trigger: TTCAGATGATAAGTGCCAGCAAAGGTGAGATGAGCC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGCTCATCTCACCTTTaGTGGCACTTATCATCTGAA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGSSHL*WHLSSE
Trigger: TTCAGATGATAAGTGCCAGCAAAGGTGAGATGAGCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTGGCTCAGTCACTTCTaGCCTGTCAGTTTCTATTAC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRWLSHF*PVSFYY
Trigger: GTAATAGAAACTGACAGGGCAGAAGTGACTGAGCCA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTCAGCGATGCGCTCTaGTCCATAGAGATCTCCATA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFSDAL*SIEISI
Trigger: TATGGAGATCTCTATGGAGCAGAGCGCATCGCTGAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTCAGCGATGCGCTCTaGTCCATAGAGATCTCCATA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFSDAL*SIEISI
Trigger: TATGGAGATCTCTATGGAGCAGAGCGCATCGCTGAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCAATTTCATCACCAATaGCTCCACCTGCTCTTACGC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDQFHHQ*LHLLLR
Trigger: GCGTAAGAGCAGGTGGAGGCATTGGTGATGAAATTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATGTCTTCCCGTACTTaGTCCTGCTGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSMSSRT*SCWSRS
Trigger: GCTGCGGGACCAGCAGGAGCAAGTACGGGAAGACAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATGTCTTCCCGTACTTaGTCCTGCTGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKMSSRT*SCWSRS
Trigger: GCTGCGGGACCAGCAGGAGCAAGTACGGGAAGACAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAATGTCTTCCCGTACTTaGTCCTGCTGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVMSSRT*SCWSRS
Trigger: GCTGCGGGACCAGCAGGAGCAAGTACGGGAAGACAT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTACTTGGCTTCTGAGGTaGGTTCCAAGAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSTWLLR*VPRSTG
Trigger: GCCTGTGCTTCTTGGAACCCACCTCAGAAGCCAAGT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAACAGGCTTCTCCTGTaGCATGTTCCCGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSNRLLL*HVPADL
Trigger: TAGGTCTGCGGGAACATGCCACAGGAGAAGCCTGTT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCTCTCCATAGAGACCTaGCTCTGGTCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLSIET*LWSQLL
Trigger: GAGGAGCTGGGACCAGAGCCAGGTCTCTATGGAGAG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCGGAGTCGGAAGGCCTaGCCCCACCTGATGTTACTG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRSRKA*PHLMLL
Trigger: CAGTAACATCAGGTGGGGCCAGGCCTTCCGACTCCG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGTAGAAGAAGGCCTTaGTCTTCTGTCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSCRRRP*SSVKAK
Trigger: CTTGGCCTTGACAGAAGACCAAGGCCTTCTTCTACA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGGAAGGAGAAGGCTGTaGATTTGGTGTCGGATTTTC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDGRRRL*IWCRIF
Trigger: GAAAATCCGACACCAAATCCACAGCCTTCTCCTTCC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCCCGTACTTGATTTCTaGAACTCCCATGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSPVLDF*NSHAFH
Trigger: ATGGAAGGCATGGGAGTTCCAGAAATCAAGTACGGG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAATGATGCGAGCAGCCTaGGACTCTTCCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVMMRAA*DSSCWH
Trigger: GTGCCAGCAGGAAGAGTCCCAGGCTGCTCGCATCAT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTTCCACTGACAAACTaGCTGAATAAGGCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFPLTN*LNKAVV
Trigger: CACAACCGCCTTATTCAGCCAGTTTGTCAGTGGAAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTTCCACTGACAAACTaGCTGAATAAGGCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFPLTN*LNKAVV
Trigger: CACAACCGCCTTATTCAGCCAGTTTGTCAGTGGAAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTCCACTGACAAACTaGCTGAATAAGGCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFPLTN*LNKAVV
Trigger: CACAACCGCCTTATTCAGCCAGTTTGTCAGTGGAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCACAGATCAGATTCTaGTTGGCTCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSQIRF*LALTAT
Trigger: GGTTGCAGTAAGAGCCAACCAGAATCTGATCTGTGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCCCAGGAAGATGTTTaGCCGGATGCTGGTGACATC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSQEDV*PDAGDI
Trigger: GATGTCACCAGCATCCGGCCAAACATCTTCCTGGGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGCAAAACAACCTGACTaGTATCTATGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFAKQPD*YLWDMG
Trigger: TCCCATGTCCCATAGATACCAGTCAGGTTGTTTTGC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTATCCCCCAAAGCTCGTaGATGTTCTCAGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSIPQSS*MFSASL
Trigger: CAGACTGGCTGAGAACATCCACGAGCTTTGGGGGAT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTCATGCGGCCAATCTaGGATAGCCCCAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSFMRPI*DSPREQ
Trigger: TTGCTCTCTGGGGCTATCCCAGATTGGCCGCATGAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCACATTCACAAATGTTaGGAGGCGCTTGCTAAACCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHHIHKC*EALAKP
Trigger: TGGTTTAGCAAGCGCCTCCCAACATTTGTGAATGTG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGTCACCTTGAGGCATaGAGGGCTGTCCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGHLEA*RAVHGA
Trigger: GGCACCATGGACAGCCCTCCATGCCTCAAGGTGACC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACCGAGGTGGACACTGTaGGGTGGGGTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVPRWTL*GGVLLF
Trigger: GAAGAGAAGAACCCCACCCCACAGTGTCCACCTCGG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCGAGGTGGACACTGTaGGGTGGGGTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPRWTL*GGVLLF
Trigger: GAAGAGAAGAACCCCACCCCACAGTGTCCACCTCGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGACATCCAGCCGAGGTaGACACTGTGGGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIDIQPR*TLWGGV
Trigger: AACCCCACCCCACAGTGTCCACCTCGGCTGGATGTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGATTTGCCTGCAGCTTaGACACGTAAATGTCACCAA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHDLPAA*TRKCHQ
Trigger: TTGGTGACATTTACGTGTCCAAGCTGCAGGCAAATC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTCTCGGATCTCCTCTaGGCAGGGGCAGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILSDLL*AGAVLS
Trigger: GGAGAGAACTGCCCCTGCCCAGAGGAGATCCGAGAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTCTTCCGCAGAGCCTaGAGCAACTCCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVFRRA*SNSPML
Trigger: CAGCATTGGGGAGTTGCTCCAGGCTCTGCGGAAGAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGCTAGCAACCATCTTTaGGAAGGCAATCTGCGACTT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSASNHL*EGNLRL
Trigger: AAGTCGCAGATTGCCTTCCCAAAGATGGTTGCTAGC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGCTGCCACATCCAGTaGGGTGGACCCCCTCATCGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGCHIQ*GGPPHR
Trigger: TCGATGAGGGGGTCCACCCCACTGGATGTGGCAGCC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGCGCTCCCCTTCGATaGGGTTCCAGCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSAPLR*GSSQRQ
Trigger: CTGACGTTGGCTGGAACCCCATCGAAGGGGAGCGCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTCACCCCTCAGAGCTaGGCCGAAGCACTCGGGACG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFTPQS*AEALGT
Trigger: CGTCCCGAGTGCTTCGGCCCAGCTCTGAGGGGTGAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCCCCTTTCCCTGTTTaGATGAGATGCATTTCGGGA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSPFPV*MRCISG
Trigger: TCCCGAAATGCATCTCATCCAAACAGGGAAAGGGGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCAGGGAGCGCAGGATaGACCGGATCCGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPGSAG*TGSGWL
Trigger: AAGCCATCCGGATCCGGTCCATCCTGCGCTCCCTGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGACCATGGGTGCCTTGTaGTCAGGGCAGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKTMGAL*SGQKLA
Trigger: GGCCAACTTCTGCCCTGACCACAAGGCACCCATGGT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACCATGGGTGCCTTGTaGTCAGGGCAGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVTMGAL*SGQKLA
Trigger: GGCCAACTTCTGCCCTGACCACAAGGCACCCATGGT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTTCAGGGACTCTCTaGCAGGCCAGCGATAAATTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFSGTL*QASDKF
Trigger: AAATTTATCGCTGGCCTGCCAGAGAGTCCCTGAAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAACTATTGCCCTGATTaGTCTGGGACACACATCGAA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFNYCPD*SGTHIE
Trigger: TTCGATGTGTGTCCCAGACCAATCAGGGCAATAGTT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGTACCAAAAGCGGGTaGCTGCCACCACCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGTKSG*LPPPLL
Trigger: AAGCAAGGGTGGTGGCAGCCACCCGCTTTTGGTACC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGTCAAGGTGTCATATaGTACCAAAAGCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSQGVI*YQKRVA
Trigger: AGCCACCCGCTTTTGGTACCATATGACACCTTGACT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGATGGATGTCAGGATaGGAAGCAGAGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRWMSG*EAEPLW
Trigger: CCACAGTGGCTCTGCTTCCCATCCTGACATCCATCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCGATGTGCTCAAAGATaGATGTCAGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRCAQR*MSGWEA
Trigger: TGCTTCCCATCCTGACATCCATCTTTGAGCACATCG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATCACTTCAATGACATaGGGCATCTCAGTGTACCGG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSITSMT*GISVYR
Trigger: CCGGTACACTGAGATGCCCCATGTCATTGAAGTGAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGGGTGGGGATGAAGTaGCTTCGAAGCAGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRVGMK*LRSRSG
Trigger: GCCCGACCTGCTTCGAAGCCACTTCATCCCCACCCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTCAGAATCAGGATCTaGGCTTTTGAGCCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVRIRI*AFEPVR
Trigger: TCTAACTGGCTCAAAAGCCCAGATCCTGATTCTGAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGTGAGATGAGCTCCTaGTCGCCTGGAGTACACATG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSEMSS*SPGVHM
Trigger: CATGTGTACTCCAGGCGACCAGGAGCTCATCTCACT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTGCCATTTCACAGCTaGGTCATCAGACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDLPFHS*VIRLLL
Trigger: CAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAATGATCTGGTGAAGTaGGTCAGGTTGCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSNDLVK*VRLPLC
Trigger: ACAGAGAGGCAACCTGACCCACTTCACCAGATCATT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGCAGCTCGATCTGACTaGAATCCTGAGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDAARSD*NPEKAS
Trigger: TGAAGCTTTCTCAGGATTCCAGTCAGATCGAGCTGC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACCCTATGTCCTTGGCTaGCTCATGGAACCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKPYVLG*LMEPLY
Trigger: GTAGAGAGGTTCCATGAGCCAGCCAAGGACATAGGG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGCCACCTTCTTTCTTaGAGTGGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSHLLS*SGFQRG
Trigger: ACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCAAAGCACGCAGTGTTaGTGCCATATAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDQSTQC*CHITSA
Trigger: AGCACTGGTTATATGGCACCAACACTGCGTGCTTTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCAAAGCACGCAGTGTTaGTGCCATATAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSQSTQC*CHITSA
Trigger: AGCACTGGTTATATGGCACCAACACTGCGTGCTTTG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTGGCCTCTTCTACTaGGCTAAAGTCAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFGLFY*AKVKGI
Trigger: AATGCCCTTGACTTTAGCCCAGTAGAAGAGGCCAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGTACTTCATGTCGATaGAACTTAGCCATGACACCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGTSCR*NLAMTP
Trigger: TGGTGTCATGGCTAAGTTCCATCGACATGAAGTACC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGTACTTCATGTCGATaGAACTTAGCCATGACACCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGTSCR*NLAMTP
Trigger: TGGTGTCATGGCTAAGTTCCATCGACATGAAGTACC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCAGTCCTCAGGAACTaGATCTCATCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSVLRN*ISSSPP
Trigger: AGGAGGCGAGGATGAGATCCAGTTCCTGAGGACTGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTGCCTAATGCTCTCATaGAAAATGCTAATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHCLMLS*KMLIVA
Trigger: GGCCACAATTAGCATTTTTCATGAGAGCATTAGGCA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091818.6
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTTCTTGCAGTGCTCTaGCAGATAAGGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFLAVL*QIRTVP
Trigger: TGGAACAGTCCTTATCTGTCAGAGCACTGCAAGAAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTCAATGCTACTTCCTaGGCAGGTAGGATGTACGTT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFNATS*AGRMYV
Trigger: AACGTACATCCTACCTGCTCAGGAAGTAGCATTGAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCTCCTTGATTTCCTTTaGTGCTCGGAAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLLDFL*CSEGEG
Trigger: GCCTTCTCCTTCCGAGCATCAAAGGAAATCAAGGAG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCAGAATCCCCGTACTTaGTTTCTGGAACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSQNPRT*FLELPC
Trigger: GCATGGGAGTTCCAGAAATCAAGTACGGGGATTCTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCGGTTGTGTTCCGGATaGTGCGAGCAGCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRLCSG*CEQPGT
Trigger: AGTCCCAGGCTGCTCGCATCATCCGGAACACAACCG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCTGGGTATCCGTCCTaGCCACAGATGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSGYPS*PQMKPI
Trigger: GATGGGCTTCATCTGTGGTCAGGACGGATACCCAGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTACTTTGACACCAGCTaGAAAACTCATCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFYFDTS*KTHHRE
Trigger: TTCCCTGTGATGAGTTTTTCAGCTGGTGTCAAAGTA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGCAAGGGGCATAGCCTaGGGGAGGCAGGAACTTAAA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVARGIA*GRQELK
Trigger: TTTAAGTTCCTGCCTCCCTCAGGCTATGCCCCTTGC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGTTCCCCATTCAGTGTaGAGACCATGGAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKVPHSV*RPWRHH
Trigger: ATGATGCCTCCATGGTCTTCACACTGAATGGGGAAC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTACATGGTATAAAACTTaGAGGTACTGGCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFTWYKT*RYWHLS
Trigger: GGACAGATGCCAGTACCTTCAAGTTTTATACCATGT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACATGGTATAAAACTTaGAGGTACTGGCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTWYKT*RYWHLS
Trigger: GGACAGATGCCAGTACCTTCAAGTTTTATACCATGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGACAGGGACTGTGACTaGAAGAGGAATGACATTCAA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSDRDCD*KRNDIQ
Trigger: TTGAATGTCATTCCTCTTTCAGTCACAGTCCCTGTC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCCAACCCAGACACATaGTGGGTCCTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSNPDT*WVLPSK
Trigger: TTTGCTGGGCAGGACCCATCATGTGTCTGGGTTGGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGCTCTGTCTCCACTTTaGGGAAGCTGCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKALSPL*GSCWAF
Trigger: GAATGCCCAGCAGCTTCCTCAAAGTGGAGACAGAGC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCAGGGCTCTGCTTCTaGTGGTCCTCACTCGTCACC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISGLCF*WSSLVT
Trigger: GGTGACGAGTGAGGACCATCAGAAGCAGAGCCCTGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCAGGGCTCTGCTTCTaGTGGTCCTCACTCGTCACC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSGLCF*WSSLVT
Trigger: GGTGACGAGTGAGGACCATCAGAAGCAGAGCCCTGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCGCACATCTGCAGCTTaGCAGACTCAGGCAATCGGG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRTSAA*QTQAIG
Trigger: CCCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGTCTCCGAAGGAGGTTaGACATCATCCTCACCAGTT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSVSEGG*TSSSPV
Trigger: AACTGGTGAGGATGATGTTCAACCTCCTTCGGAGAC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCAGCCTCTGTGGTGCTaGGGGACACTGTATCTAGAG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSQPLWC*GTLYLE
Trigger: CTCTAGATACAGTGTCCCTCAGCACCACAGAGGCTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCCCTCTGTGCCTTGGTaGGGGAGCGTCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIPSVPW*GSVLWK
Trigger: TTTCCAAAGGACGCTCCCTCACCAAGGCACAGAGGG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGAAGAGCTTCTCAGTaGGGTGCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRRASQ*GAAPPP
Trigger: TGGAGGAGGAGCTGCACCTCACTGAGAAGCTCTTCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCAAGCCCATTTATCATaGGAATGCTCAGCATACTTG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHQAHLS*ECSAYL
Trigger: CAAGTATGCTGAGCATTCTCATGATAAATGGGCTTG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTATTTCCATCCACTGTaGCTCTTGTCACAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSYFHPL*LLSQAH
Trigger: ATGGGCTTGTGACAAGAGTCACAGTGGATGGAAATA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCTCTGTTAATGTCTTaGAGGGCCGTATTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSLLMS*RAVLVG
Trigger: ACCCACTAATACGGCCCTTCAAGACATTAACAGAGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCTCTGTTAATGTCTTaGAGGGCCGTATTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSLLMS*RAVLVG
Trigger: ACCCACTAATACGGCCCTTCAAGACATTAACAGAGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAACCTCCACCATTCCCTaGAGCTCCCTGGACAGCACA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTTSTIP*SSLDST
Trigger: TGTGCTGTCCAGGGAGCTTCAGGGAATGGTGGAGGT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACATCGCTCCCAAAGAGTaGAATCCTGTGTCTAACAAG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDIAPKE*NPVSNK
Trigger: CTTGTTAGACACAGGATTTCACTCTTTGGGAGCGAT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATCGCTCCCAAAGAGTaGAATCCTGTGTCTAACAAG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSIAPKE*NPVSNK
Trigger: CTTGTTAGACACAGGATTTCACTCTTTGGGAGCGAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCTGAGAAACACCTTTaGTCTGCGTTCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSEKHL*SAFGNG
Trigger: CCCATTCCCGAACGCAGATCAAAGGTGTTTCTCAGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGTGTACCGGGCACCTaGCTCGGCCAAGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSVPGT*LGQVID
Trigger: ATCAATGACTTGGCCGAGTCAGGTGCCCGGTACACT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAATTTACACCACAGAATaGAGACCTCGGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKIYTTE*RPRPPC
Trigger: GCATGGTGGCCGAGGTCTTCATTCTGTGGTGTAAAT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTACTTGCATGGCTTTTaGCATCTTGCTTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHYLHGF*HLAFAV
Trigger: GACAGCAAAAGCAAGATGTCAAAAGCCATGCAAGTA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATTTTGCGAGTGAGATaGGCTCCTGGTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKILRVR*APGRLE
Trigger: CTCCAGGCGACCAGGAGCTCATCTCACTCGCAAAAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCGTTTCCGTTGCTTTaGCAACAATTTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPFPLL*QQFVPY
Trigger: GTATGGCACAAATTGTTGTCAAAGCAACGGAAACGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGACCAGAGAGGCTTTaGAAGAATCCAGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRPERL*KNPASF
Trigger: AAAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTCCTCAGGAAGTTCTaGAAGTCACTGTTATGTCCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVLRKF*KSLLCP
Trigger: AGGACATAACAGTGACTTTCAGAACTTCCTGAGGAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCCCACAGCCTACTGTaGGCCAGGCTTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSHSLL*ARLCWF
Trigger: GAACCAGCAAAGCCTGGCTCACAGTAGGCTGTGGGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTATCACCACCATGTCCTaGAGGAGATCCAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSITTMS*RRSKSS
Trigger: GGAACTCTTGGATCTCCTTCAGGACATGGTGGTGAT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCCTTCCATGGCCTTCTaGAATTCTTTTCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSPSMAF*NSFREM
Trigger: CATCTCTCGAAAAGAATTTCAGAAGGCCATGGAAGG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGTCCAACAGACTCTTaGGACGGGAATCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGPTDS*DGNRWA
Trigger: TGCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGTCCAACAGACTCTTaGGACGGGAATCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGPTDS*DGNRWA
Trigger: TGCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCTTGGCCCCACCCATaGTCTCAATTCGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSWPHP*SQFDPG
Trigger: ACCTGGGTCGAATTGAGATCATGGGTGGGGCCAAGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGTCCCACTGCCCCTTaGTGTCATCCTCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGPTAP*CHPQMA
Trigger: AGCCATCTGAGGATGACATCAAGGGGCAGTGGGACC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTGTCCTCCAGATTTTaGCATCTTGCTTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLSSRF*HLAFAV
Trigger: GACAGCAAAAGCAAGATGTCAAAATCTGGAGGACAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080673.13
ENSMUST00000208151.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGGCATCCACTTGGATaGTACCATTTGATATCGAGA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRHPLG*YHLISR
Trigger: TCTCGATATCAAATGGTAGCATCCAAGTGGATGCCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGTTTTGGCATCTTGTaGTTTGTAGGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSFGIL*FVGDPK
Trigger: CTTTGGGTCACCTACAAAGCACAAGATGCCAAAACT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGTTTTGGCATCTTGTaGTTTGTAGGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSFGIL*FVGDPK
Trigger: CTTTGGGTCACCTACAAAGCACAAGATGCCAAAACT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGCCTGGGACTCTTCCTaGTGGCACCTCTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIAWDSS*WHLCSV
Trigger: AACACTGCAGAGGTGCCAGCAGGAAGAGTCCCAGGC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGCCTGGGACTCTTCCTaGTGGCACCTCTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTAWDSS*WHLCSV
Trigger: AACACTGCAGAGGTGCCAGCAGGAAGAGTCCCAGGC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACTGGTTGGCTCTTACTaGAACCCCATTGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKLVGSY*NPIAET
Trigger: TGTCTCTGCAATGGGGTTGCAGTAAGAGCCAACCAG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCATCACCGACACCATTaGCTCCCCATCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKHHRHH*LPILLH
Trigger: GTGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAACTTAAATTCTCCATaGCGACCACCCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSNLNSP*RPPIRK
Trigger: CTTCCTGATGGGTGGTCGGCATGGAGAATTTAAGTT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCCACAAGGCAGGGATaGTGCCTTTTGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSTRQG*CLLLSS
Trigger: GGATGACAACAAAAGGCAGCATCCCTGCCTTGTGGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGAGGGCTGTCCATGGTaGCATCAATTCTCACAACCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSEGCPW*HQFSQP
Trigger: AGGTTGTGAGAATTGATGGCACCATGGACAGCCCTC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGACCATGTAGCAGTTaGTGCGTTTCACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRPCSS*CVSHFH
Trigger: ATGAAAGTGTGAAACGCAGCAACTGCTACATGGTCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGACCATGTAGCAGTTaGTGCGTTTCACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRRPCSS*CVSHFH
Trigger: ATGAAAGTGTGAAACGCAGCAACTGCTACATGGTCT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTGAGAAGGACAACATaGCCATTGCCAGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLRRTT*PLPDLE
Trigger: TTCTAGATCTGGCAATGGGCATGTTGTCCTTCTCAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCTCAGGGATGTGGAGTaGCATCATCTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLRDVE*HHLQGF
Trigger: GAACCCCTGCAGATGATGGCACTCCACATCCCTGAG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGCATCAGGTCCTCCTaGTCACAGAGCTCGAGGATG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKCIRSS*SQSSRM
Trigger: CATCCTCGAGCTCTGTGAGCAGGAGGACCTGATGCA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGAGGTCCACGTGGCTaGACAGGGCAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRGPRG*TGQKPL
Trigger: GAGTGGCTTCTGCCCTGTGCAGCCACGTGGACCTCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTCTCCAGCCTCCACTaGCTTTTCCTCTGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFSSLH*LFLCVG
Trigger: ACCCACGCAGAGGAAAAGGCAGTGGAGGCTGGAGAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCATCACAGAGGAGGCTaGCACATCCAGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIHHRGG*HIQWGG
Trigger: TCCACCCCACTGGATGTGGCAGCCTCCTCTGTGATG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGACGACGCAGGAGTTaGTGTAACATGGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSRRRRS*CNMEGL
Trigger: GAGACCTTCCATGTTACAGCAACTCCTGCGTCGTCT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGACGACGCAGGAGTTaGTGTAACATGGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRRRRS*CNMEGL
Trigger: GAGACCTTCCATGTTACAGCAACTCCTGCGTCGTCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGCTTCTCAGTGAGGTaGAGCTCCTCCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISFSVR*SSSSTA
Trigger: GGCTGTGGAGGAGGAGCTGCACCTCACTGAGAAGCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGCTGCCACCACCCTTaGTTTCCAGCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGCHHP*FPAPAS
Trigger: AGAAGCTGGAGCTGGAAAGCAAGGGTGGTGGCAGCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGGCATACACTGCGATaGGCTTCATCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGHTLR*ASSRRP
Trigger: AGGCCTCCTGGATGAAGCGCATCGCAGTGTATGCCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGCTGCTCCTCCTCCTaGACAGTCTTCACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISCSSS*TVFTAF
Trigger: GAAGGCGGTGAAGACTGTGCAGGAGGAGGAGCAGCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACCATCGGTCTTCAGCTaGTCCTCCTCCTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTPSVFS*SSSCTV
Trigger: GACTGTGCAGGAGGAGGAGCAGCTGAAGACCGATGG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCTGGGTGTCCCCCTTaGCATCGGTCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPGCPP*HRSSAA
Trigger: AGCAGCTGAAGACCGATGGCAAGGGGGACACCCAGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGGCATAGAGGTCCCTaGAGAGGACAGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRHRGP*RGQQTH
Trigger: ATGAGTTTGCTGTCCTCTGCAGGGACCTCTATGCCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGACCTCGGCCACCATaGGGAAGAGCTGGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRPRPP*GRAGQN
Trigger: ATTCTGACCAGCTCTTCCGCATGGTGGCCGAGGTCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGAGAGCTGCCGAAATaGTCTGCACCCGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRELPK*SAPAPP
Trigger: CGGTGGAGCGGGTGCAGAGCATTTCGGCAGCTCTCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCACTGCCCGTTTCCGTTaGTTTGACAACAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSTARFR*FDNNLC
Trigger: GCACAAATTGTTGTCAAAGCAACGGAAACGGGCAGT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGGCTCATCTCACCTTTaGTGGCACTTATCATCTGAA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDGSSHL*WHLSSE
Trigger: TTCAGATGATAAGTGCCAGCAAAGGTGAGATGAGCC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGGACACTGCAGGACTaGATAAGACCAGAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRTLQD*IRPERL
Trigger: AAGCCTCTCTGGTCTTATGCAGTCCTGCAGTGTCCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACACTCTGATGTTCTTTaGCCCTTCGACAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVHSDVL*PFDKAP
Trigger: GGGGGCCTTGTCGAAGGGGCAAAGAACATCAGAGTG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCACTCTGATGTTCTTTaGCCCTTCGACAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSHSDVL*PFDKAP
Trigger: GGGGGCCTTGTCGAAGGGGCAAAGAACATCAGAGTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGGCTCAGTCACTTCTaGCCTGTCAGTTTCTATTAC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDWLSHF*PVSFYY
Trigger: GTAATAGAAACTGACAGGGCAGAAGTGACTGAGCCA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGTGCCATATAACCAGTaGTCTCCTGAAGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRVPYNQ*SPEEQR
Trigger: TCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCAC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACCAAGCGGTCCCACTaGCCCTTGATGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVTKRSH*PLMSSS
Trigger: TGAGGATGACATCAAGGGGCAGTGGGACCGCTTGGT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGTCTTAAAGCCCATTaGAATATCCAACAGATGAGC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGLKAH*NIQQMS
Trigger: GCTCATCTGTTGGATATTGCAATGGGCTTTAAGACC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAAGGAGGCATCCACTTaGATGCTACCATTTGATATC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRKEAST*MLPFDI
Trigger: GATATCAAATGGTAGCATCCAAGTGGATGCCTCCTT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAATAGAGACCTGGCTCTaGTCCCAGCTCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVIETWL*SQLLQL
Trigger: AAGCTGGAGGAGCTGGGACCAGAGCCAGGTCTCTAT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATAGAGACCTGGCTCTaGTCCCAGCTCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSIETWL*SQLLQL
Trigger: AAGCTGGAGGAGCTGGGACCAGAGCCAGGTCTCTAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACTCTCCATAGAGACCTaGCTCTGGTCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLSIET*LWSQLL
Trigger: GAGGAGCTGGGACCAGAGCCAGGTCTCTATGGAGAG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCGGAGTCGGAAGGCCTaGCCCCACCTGATGTTACTG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRSRKA*PHLMLL
Trigger: CAGTAACATCAGGTGGGGCCAGGCCTTCCGACTCCG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACATCTCGTCCTCTGGTaGCTGGAAGTAGGCTATCAA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKHLVLW*LEVGYQ
Trigger: TTGATAGCCTACTTCCAGCCACCAGAGGACGAGATG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTGCATCTCGTCCTCTaGTGGCTGGAAGTAGGCTAT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLHLVL*WLEVGY
Trigger: ATAGCCTACTTCCAGCCACCAGAGGACGAGATGCAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGGAAGCCACAGCTCTaGGTATCCGTCCTGACCACA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSWKPQL*VSVLTT
Trigger: TGTGGTCAGGACGGATACCCAGAGCTGTGGCTTCCA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGGAAGCCACAGCTCTaGGTATCCGTCCTGACCACA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKWKPQL*VSVLTT
Trigger: TGTGGTCAGGACGGATACCCAGAGCTGTGGCTTCCA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCCTGTTTGATTTCTTaGTGCGCTCATCTAGTAATG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPCLIS*CAHLVM
Trigger: CATTACTAGATGAGCGCACCAAGAAATCAAACAGGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCCTGTTTGATTTCTTaGTGCGCTCATCTAGTAATG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPCLIS*CAHLVM
Trigger: CATTACTAGATGAGCGCACCAAGAAATCAAACAGGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGATCAGCTAGTTCTTaGTCTGAAGGCTCAATGTTA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGSASS*SEGSML
Trigger: TAACATTGAGCCTTCAGACCAAGAACTAGCTGATCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGATCAGCTAGTTCTTaGTCTGAAGGCTCAATGTTA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGSASS*SEGSML
Trigger: TAACATTGAGCCTTCAGACCAAGAACTAGCTGATCC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCCCGACCACATCTCCTaGCTGCCAAGTTCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSPDHIS*LPSSSK
Trigger: TTTGGACGAACTTGGCAGCCAGGAGATGTGGTCGGG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGCCCCAGAGAGCAAATaGGCACAAAACCGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSAPESK*AQNRSQ
Trigger: TTGAGAACGGTTTTGTGCCCATTTGCTCTCTGGGGC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCACATTCACAAATGTTaGGAGGCGCTTGCTAAACCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDHIHKC*EALAKP
Trigger: TGGTTTAGCAAGCGCCTCCCAACATTTGTGAATGTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGTCACCTTGAGGCATaGAGGGCTGTCCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGHLEA*RAVHGA
Trigger: GGCACCATGGACAGCCCTCCATGCCTCAAGGTGACC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTCCGACTTGATCTTTaGGAACTGGCTACAATATCC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLRLDL*ELATIS
Trigger: GGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCCGAGGTGGACACTGTaGGGTGGGGTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIPRWTL*GGVLLF
Trigger: GAAGAGAAGAACCCCACCCCACAGTGTCCACCTCGG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGACATCCAGCCGAGGTaGACACTGTGGGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFDIQPR*TLWGGV
Trigger: AACCCCACCCCACAGTGTCCACCTCGGCTGGATGTC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGAGAACCTGAAGCCTaGCTTGAGGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGEPEA*LEACPQ
Trigger: CTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGAGAACCTGAAGCCTaGCTTGAGGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGEPEA*LEACPQ
Trigger: CTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTATCAGGAGGAGAATCTaGCGAACATCATCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSIRRRI*RTSSSS
Trigger: CGACGACGATGATGTTCGCCAGATTCTCCTCCTGAT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATGTTGATCTGCTCCTaGGGCGGTGAGCGGAACTCT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKMLICS*GGERNS
Trigger: AGAGTTCCGCTCACCGCCCCAGGAGCAGATCAACAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAATGTTGATCTGCTCCTaGGGCGGTGAGCGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVMLICS*GGERNS
Trigger: AGAGTTCCGCTCACCGCCCCAGGAGCAGATCAACAT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTCTTCCGCAGAGCCTaGAGCAACTCCCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVFRRA*SNSPML
Trigger: CAGCATTGGGGAGTTGCTCCAGGCTCTGCGGAAGAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGCGCTCCCCTTCGATaGGGTTCCAGCCAACGTCAG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSAPLR*GSSQRQ
Trigger: CTGACGTTGGCTGGAACCCCATCGAAGGGGAGCGCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATGGACCGGATCCGGATaGCTTCCCCTTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVWTGSG*LPLSLF
Trigger: AAACAGGGAAAGGGGAAGCCATCCGGATCCGGTCCA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAACCATGGGTGCCTTGTaGTCAGGGCAGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTTMGAL*SGQKLA
Trigger: GGCCAACTTCTGCCCTGACCACAAGGCACCCATGGT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGAGTTGCTGTAACATaGAAGGTCTCAAATGATTGC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGVAVT*KVSNDC
Trigger: GCAATCATTTGAGACCTTCCATGTTACAGCAACTCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTTTCAGGGACTCTCTaGCAGGCCAGCGATAAATTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFSGTL*QASDKF
Trigger: AAATTTATCGCTGGCCTGCCAGAGAGTCCCTGAAAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGGCTTCTCCTTCTTTaGTCCTTTCCACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSRLLLL*SFPLSS
Trigger: GCTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCAGCTTCTTCTTCTTaGCCCAGATATTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPASSS*PRYCDS
Trigger: ACTATCACAATATCTGGGCCAAGAAGAAGAAGCTGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGTACTGGTCGACCAGTaGGAGGAGAACTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSVLVDQ*EENFGK
Trigger: TTTGCCAAAGTTCTCCTCCCACTGGTCGACCAGTAC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGGAAATACAGGCGGTaGTTGGTGAAGTACTGGTCG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRKYRR*LVKYWS
Trigger: CGACCAGTACTTCACCAACCACCGCCTGTATTTCCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAATCTGCGTTCGGGAATaGGTAAACTTCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKICVRE*VNFPSF
Trigger: GAAGCTGGGGAAGTTTACCCATTCCCGAACGCAGAT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACTGAGAGGGGATTGTaGCGGTTAAGGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITERGL*RLRLGS
Trigger: GGAGCCCAGCCTTAACCGCCACAATCCCCTCTCAGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGTCCTCCACCTTGTCTaGCATCCCCAGAATAGAGCG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSVLHLV*HPQNRA
Trigger: CGCTCTATTCTGGGGATGCCAGACAAGGTGGAGGAC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTGCTGATAATTGGCTaGGCATACACTGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLLIIG*AYTAMR
Trigger: GCGCATCGCAGTGTATGCCCAGCCAATTATCAGCAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTCAGAATCAGGATCTaGGCTTTTGAGCCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVRIRI*AFEPVR
Trigger: TCTAACTGGCTCAAAAGCCCAGATCCTGATTCTGAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCTTGGCCATCATGCTaGAATAGGAAGTGTACAATG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSWPSC*NRKCTM
Trigger: CATTGTACACTTCCTATTCCAGCATGATGGCCAAGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACACTCTGACAGCTCTTaGCCATCATGCTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKHSDSS*PSCWNR
Trigger: CCTATTCCAGCATGATGGCCAAGAGCTGTCAGAGTG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCATCTCACCTTTGCTaGCACTTATCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSSHLC*HLSSEG
Trigger: TCCTTCAGATGATAAGTGCCAGCAAAGGTGAGATGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATGTTAGCAAATACATaGAGGAACCCGACTACTGCA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHMLANT*RNPTTA
Trigger: TGCAGTAGTCGGGTTCCTCCATGTATTTGCTAACAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGATCCCAAACTGAGTaGGGTCGGGCATGTCACCTA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGSQTE*GRACHL
Trigger: TAGGTGACATGCCCGACCCCACTCAGTTTGGGATCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGATCCCAAACTGAGTaGGGTCGGGCATGTCACCTA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGSQTE*GRACHL
Trigger: TAGGTGACATGCCCGACCCCACTCAGTTTGGGATCC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGCCACCTTCTTTCTTaGAGTGGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSHLLS*SGFQRG
Trigger: ACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGCCACCTTCTTTCTTaGAGTGGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSHLLS*SGFQRG
Trigger: ACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGTAGTGCAATAACTTaGTCTGATAAATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGSAIT*SDKSPA
Trigger: GGCTGGAGATTTATCAGACCAAGTTATTGCACTACC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGTTGTAGAAATTCCTaGCCAGGTAGTGCAATAACT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGCRNS*PGSAIT
Trigger: AGTTATTGCACTACCTGGCCAGGAATTTCTACAACC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGTTGTAGAAATTCCTaGCCAGGTAGTGCAATAACT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGCRNS*PGSAIT
Trigger: AGTTATTGCACTACCTGGCCAGGAATTTCTACAACC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGAGAGATGATGGTGTaGACAATGGCCAAAGCACGC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKREMMV*TMAKAR
Trigger: GCGTGCTTTGGCCATTGTCCACACCATCATCTCTCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGATGTCATCCTCAGATaGCTGTTCAGTGATATAGAG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRDVILR*LFSDIE
Trigger: CTCTATATCACTGAACAGCCATCTGAGGATGACATC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTTGGCCTCTTCTACTaGGCTAAAGTCAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFGLFY*AKVKGI
Trigger: AATGCCCTTGACTTTAGCCCAGTAGAAGAGGCCAAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTTGTGCTTTGTAGGTaGCCCAAAGGCCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLVLCR*PKGHWL
Trigger: TAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCCATGTGGCCTTCCTaGTGGAGTATGACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSMWPS*WSMTFL
Trigger: AAGAAAGGTCATACTCCATCAGGAAGGCCACATGGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCTGGGTATCCGTCCTaGCCACAGATGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSGYPS*PQMKPI
Trigger: GATGGGCTTCATCTGTGGTCAGGACGGATACCCAGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCTGGGTATCCGTCCTaGCCACAGATGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISGYPS*PQMKPI
Trigger: GATGGGCTTCATCTGTGGTCAGGACGGATACCCAGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGCAAGGGGCATAGCCTaGGGGAGGCAGGAACTTAAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIARGIA*GRQELK
Trigger: TTTAAGTTCCTGCCTCCCTCAGGCTATGCCCCTTGC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCACGCTTATATTCTTTaGCAGGCTCCAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDHAYIL*QAPISS
Trigger: AGATGAGATTGGAGCCTGTCAAAGAATATAAGCGTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTTGCCCAAACATTGTaGGCATTTTCTGCAAGCTTA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFAQTL*AFSASL
Trigger: TAAGCTTGCAGAAAATGCTCACAATGTTTGGGCAAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTGCCCAAACATTGTaGGCATTTTCTGCAAGCTTA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFAQTL*AFSASL
Trigger: TAAGCTTGCAGAAAATGCTCACAATGTTTGGGCAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCAAACACGAAGGCTTaGTCATCAGCCCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSNTKA*SSAPSS
Trigger: TGAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAACCTCTATGTGGGGATaGTCCTTAGGCACATTCACA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKTSMWG*SLGTFT
Trigger: TGTGAATGTGCCTAAGGATCATCCCCACATAGAGGT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCCAACCCAGACACATaGTGGGTCCTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSNPDT*WVLPSK
Trigger: TTTGCTGGGCAGGACCCATCATGTGTCTGGGTTGGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGCTCTGTCTCCACTTTaGGGAAGCTGCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTALSPL*GSCWAF
Trigger: GAATGCCCAGCAGCTTCCTCAAAGTGGAGACAGAGC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCTGCAGCAAGCCTTTaGCTGGAGCCTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSAASL*LEPPCR
Trigger: CCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGTTCAGGGCCTGCATaGGCTCATTGTAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKCSGPA*AHCSGT
Trigger: AGTTCCGCTACAATGAGCTCATGCAGGCCCTGAACA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATGTTCAGGGCCTGCATaGGCTCATTGTAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVCSGPA*AHCSGT
Trigger: AGTTCCGCTACAATGAGCTCATGCAGGCCCTGAACA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCAGTTCTCTCCCAGGTaGAAGTTGAGAAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSQFSPR*KLRSML
Trigger: CAACATGCTTCTCAACTTTCACCTGGGAGAGAACTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACAGTTCTCTCCCAGGTaGAAGTTGAGAAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKQFSPR*KLRSML
Trigger: CAACATGCTTCTCAACTTTCACCTGGGAGAGAACTG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCAGCCTCTGTGGTGCTaGGGGACACTGTATCTAGAG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIQPLWC*GTLYLE
Trigger: CTCTAGATACAGTGTCCCTCAGCACCACAGAGGCTG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCCTCTGTGCCTTGGTaGGGGAGCGTCCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPSVPW*GSVLWK
Trigger: TTTCCAAAGGACGCTCCCTCACCAAGGCACAGAGGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATGGAAGGTCTCAAATaGTTGCAAATGGCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHMEGLK*LQMASK
Trigger: TTTGCTAGCCATTTGCAATCATTTGAGACCTTCCAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGAAGAGCTTCTCAGTaGGGTGCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTRRASQ*GAAPPP
Trigger: TGGAGGAGGAGCTGCACCTCACTGAGAAGCTCTTCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGAAGAGCTTCTCAGTaGGGTGCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRRASQ*GAAPPP
Trigger: TGGAGGAGGAGCTGCACCTCACTGAGAAGCTCTTCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACCTCCACCATTCCCTaGAGCTCCCTGGACAGCACA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTSTIP*SSLDST
Trigger: TGTGCTGTCCAGGGAGCTTCAGGGAATGGTGGAGGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATCAGGCCTTCCAGCTaGGGGATGTCAGGACACATG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIIRPSS*GMSGHM
Trigger: CATGTGTCCTGACATCCCTCAGCTGGAAGGCCTGAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATCAGGCCTTCCAGCTaGGGGATGTCAGGACACATG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTIRPSS*GMSGHM
Trigger: CATGTGTCCTGACATCCCTCAGCTGGAAGGCCTGAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAACTCGGCCAAGTCATTaGTTTCCTTCATCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKTRPSH*FPSSGL
Trigger: AAGGCCTGATGAAGGAAATCAATGACTTGGCCGAGT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCTCCAGGGTGGGGATaGAGTGGCTTCGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSPGWG*SGFEAG
Trigger: ACCTGCTTCGAAGCCACTTCATCCCCACCCTGGAGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCAAACTCATCTAGGATaGGGAGCTCAGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIQTHLG*GAQPPG
Trigger: CCCAGGAGGCTGAGCTCCTCATCCTAGATGAGTTTG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACAAACTCATCTAGGATaGGGAGCTCAGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTQTHLG*GAQPPG
Trigger: CCCAGGAGGCTGAGCTCCTCATCCTAGATGAGTTTG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCCCTCTTGAAGTTATaGGATTTACACCACAGAATG +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSLLKL*DLHHRM
Trigger: CATTCTGTGGTGTAAATCTCATAACTTCAAGAGGGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTTGCTCTTCCCTCTTaGAGTTATGAGATTTACACC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFALPS*SYEIYT
Trigger: GGTGTAAATCTCATAACTTCAAGAGGGAAGAGCAAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTACTTGCATGGCTTTTaGCATCTTGCTTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDYLHGF*HLAFAV
Trigger: GACAGCAAAAGCAAGATGTCAAAAGCCATGCAAGTA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATTTTGCGAGTGAGATaGGCTCCTGGTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIILRVR*APGRLE
Trigger: CTCCAGGCGACCAGGAGCTCATCTCACTCGCAAAAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGACCAGAGAGGCTTTaGAAGAATCCAGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRPERL*KNPASF
Trigger: AAAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAATAACACTGCCACATTaGACCCTATGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKITLPH*TLCPWL
Trigger: CAGCCAAGGACATAGGGTTCAATGTGGCAGTGTTAT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCTTGGCCCCACCCATaGTCTCAATTCGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISWPHP*SQFDPG
Trigger: ACCTGGGTCGAATTGAGATCATGGGTGGGGCCAAGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCTTGGCCCCACCCATaGTCTCAATTCGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSWPHP*SQFDPG
Trigger: ACCTGGGTCGAATTGAGATCATGGGTGGGGCCAAGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTCGACTGGATTCACTaGTCTCAAAATAAACACGCT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFDWIH*SQNKHA
Trigger: AGCGTGTTTATTTTGAGATCAGTGAATCCAGTCGAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCAGATTCTGAGATCTaGGATGCTAATTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSDSEI*DANCIS
Trigger: TGAGATGCAATTAGCATCTCAGATCTCAGAATCTGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGGAGAAGAACACCTTaGCCAGTTCCTTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSRRRTP*PVPLHS
Trigger: TGAGTGCAAAGGAACTGGTCAAGGTGTTCTTCTCCT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTATTGTGAAGAGCAACTaGAAGAGGCCCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSIVKSN*KRPTNS
Trigger: GCTGTTTGTGGGCCTCTTTCAGTTGCTCTTCACAAT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGACCAGCTCAGTGGTaGCACCTGGCTCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGPAQW*HLAQSL
Trigger: AAGTGACTGAGCCAGGTGTCACCACTGAGCTGGTCC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCAAAGAGGTCTGACATaGTGTCTGTATCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSQRGLT*CLYLLP
Trigger: AGGCAGGAGATACAGACATCATGTCAGACCTCTTTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGCCAATGCCGCAGATaGAGCACTTGGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKCQCRR*STWSPC
Trigger: ACATGGAGACCAAGTGCTTCATCTGCGGCATTGGCA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGGCATCCACTTGGATaGTACCATTTGATATCGAGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRHPLG*YHLISR
Trigger: TCTCGATATCAAATGGTAGCATCCAAGTGGATGCCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCCTGCTGGCACCTCTaGAGTGTTAATCCGTCATCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSCWHL*SVNPSS
Trigger: GGATGACGGATTAACACTGCAGAGGTGCCAGCAGGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATGTTTGTCTTCATGTTaGATCTCGTCCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKCLSSC*ISSSGG
Trigger: GCCACCAGAGGACGAGATGCAACATGAAGACAAACA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGATCCCTGCAAAGTGTaGTACACTATTGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHDPCKV*YTIVDV
Trigger: AACATCTACAATAGTGTAGCACACTTTGCAGGGATC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGATCCCTGCAAAGTGTaGTACACTATTGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRDPCKV*YTIVDV
Trigger: AACATCTACAATAGTGTAGCACACTTTGCAGGGATC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGATCCCTGCAAAGTGTaGTACACTATTGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFDPCKV*YTIVDV
Trigger: AACATCTACAATAGTGTAGCACACTTTGCAGGGATC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTAATTAGTCGTGTCTaGAGAAGCAGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKLISRV*RSRFLR
Trigger: CCGGAGGAACCTGCTTCTGCAGACACGACTAATTAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTAATTAGTCGTGTCTaGAGAAGCAGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLISRV*RSRFLR
Trigger: CCGGAGGAACCTGCTTCTGCAGACACGACTAATTAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCATCACCGACACCATTaGCTCCCCATCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIHHRHH*LPILLH
Trigger: GTGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGATCATGTTGGCATTaGTGTTCTGTGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSRSCWH*CSVCRR
Trigger: CCTTCGGCACACAGAACAGCAATGCCAACATGATCT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGATCATGTTGGCATTaGTGTTCTGTGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRSCWH*CSVCRR
Trigger: CCTTCGGCACACAGAACAGCAATGCCAACATGATCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTCAGGGATGTGGAGTaGCATCATCTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILRDVE*HHLQGF
Trigger: GAACCCCTGCAGATGATGGCACTCCACATCCCTGAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTGCATCAGGTCCTCCTaGTCACAGAGCTCGAGGATG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKICIRSS*SQSSRM
Trigger: CATCCTCGAGCTCTGTGAGCAGGAGGACCTGATGCA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTCTCCAGCCTCCACTaGCTTTTCCTCTGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFSSLH*LFLCVG
Trigger: ACCCACGCAGAGGAAAAGGCAGTGGAGGCTGGAGAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCTTCCTCTGTTGGCTaGTCCTTCTCAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSSSVG*SFSGLG
Trigger: ACCCAAGCCTGAGAAGGAGCAGCCAACAGAGGAAGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCATCACAGAGGAGGCTaGCACATCCAGTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFHHRGG*HIQWGG
Trigger: TCCACCCCACTGGATGTGGCAGCCTCCTCTGTGATG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGCATTTTCAAAGAATaGTCGCAGCCCGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSIFKE*SQPGFH
Trigger: GTGAAAGCCGGGCTGCGAGCATTCTTTGAAAATGCT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGTAGGACAGGTAGTTaGAGAGCATGGGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSRTGS*RAWARS
Trigger: TGATCTTGCCCATGCTCTGCAACTACCTGTCCTACT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCATCGGTCTTCAGCTaGTCCTCCTCCTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPSVFS*SSSCTV
Trigger: GACTGTGCAGGAGGAGGAGCAGCTGAAGACCGATGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCTAGCATTTTCTGTTaGACACCAGCATTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSSIFC*TPALPP
Trigger: CGGAGGCAATGCTGGTGTGCAACAGAAAATGCTAGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCATCTCTGCTGCCTGTaGTTTTCTTTTCTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSHLCCL*FSFLPH
Trigger: GTGCGGAAGAAAAGAAAAGCACAGGCAGCAGAGATG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACTTTACTGTCACGTCTaGCCACAGGTAGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKLYCHV*PQVVCL
Trigger: CAAACAGACTACCTGTGGGCAGACGTGACAGTAAAG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTGCCATATAACCAGTaGTCTCCTGAAGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVPYNQ*SPEEQR
Trigger: TCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACCAAGCGGTCCCACTaGCCCTTGATGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITKRSH*PLMSSS
Trigger: TGAGGATGACATCAAGGGGCAGTGGGACCGCTTGGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGGTCTTAAAGCCCATTaGAATATCCAACAGATGAGC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSGLKAH*NIQQMS
Trigger: GCTCATCTGTTGGATATTGCAATGGGCTTTAAGACC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCAGAACCAGCTGTTTaGCATTGTGAGTTACAGATG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSEPAV*HCELQM
Trigger: CATCTGTAACTCACAATGGCAAACAGCTGGTTCTGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCAGAACCAGCTGTTTaGCATTGTGAGTTACAGATG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSEPAV*HCELQM
Trigger: CATCTGTAACTCACAATGGCAAACAGCTGGTTCTGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACCAATGCCTCCACCTaGTCTTACGCCCACGTACAT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVTNAST*SYAHVH
Trigger: ATGTACGTGGGCGTAAGAGCAGGTGGAGGCATTGGT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACCAATGCCTCCACCTaGTCTTACGCCCACGTACAT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTNAST*SYAHVH
Trigger: ATGTACGTGGGCGTAAGAGCAGGTGGAGGCATTGGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGACCAATGCCTCCACCTaGTCTTACGCCCACGTACAT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKTNAST*SYAHVH
Trigger: ATGTACGTGGGCGTAAGAGCAGGTGGAGGCATTGGT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCAATTTCATCACCAATaGCTCCACCTGCTCTTACGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSQFHHQ*LHLLLR
Trigger: GCGTAAGAGCAGGTGGAGGCATTGGTGATGAAATTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAACAGGCTTCTCCTGTaGCATGTTCCCGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSNRLLL*HVPADL
Trigger: TAGGTCTGCGGGAACATGCCACAGGAGAAGCCTGTT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAAGGAGGCATCCACTTaGATGCTACCATTTGATATC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSKEAST*MLPFDI
Trigger: GATATCAAATGGTAGCATCCAAGTGGATGCCTCCTT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAAGGAGGCATCCACTTaGATGCTACCATTTGATATC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDKEAST*MLPFDI
Trigger: GATATCAAATGGTAGCATCCAAGTGGATGCCTCCTT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATAGAGACCTGGCTCTaGTCCCAGCTCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIIETWL*SQLLQL
Trigger: AAGCTGGAGGAGCTGGGACCAGAGCCAGGTCTCTAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTCTCCATAGAGACCTaGCTCTGGTCCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLSIET*LWSQLL
Trigger: GAGGAGCTGGGACCAGAGCCAGGTCTCTATGGAGAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCCCAGGAAGATGTTTaGCCGGATGCTGGTGACATC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSQEDV*PDAGDI
Trigger: GATGTCACCAGCATCCGGCCAAACATCTTCCTGGGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGGAAGCCACAGCTCTaGGTATCCGTCCTGACCACA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTWKPQL*VSVLTT
Trigger: TGTGGTCAGGACGGATACCCAGAGCTGTGGCTTCCA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAATCCCCCAAAGCTCGTaGATGTTCTCAGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVIPQSS*MFSASL
Trigger: CAGACTGGCTGAGAACATCCACGAGCTTTGGGGGAT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCCCGACCACATCTCCTaGCTGCCAAGTTCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIPDHIS*LPSSSK
Trigger: TTTGGACGAACTTGGCAGCCAGGAGATGTGGTCGGG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTCATGCGGCCAATCTaGGATAGCCCCAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFMRPI*DSPREQ
Trigger: TTGCTCTCTGGGGCTATCCCAGATTGGCCGCATGAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTCATGCGGCCAATCTaGGATAGCCCCAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFMRPI*DSPREQ
Trigger: TTGCTCTCTGGGGCTATCCCAGATTGGCCGCATGAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAATGGAGGGCTGTCCATaGTGCCATCAATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKMEGCP*CHQFSQ
Trigger: TTGTGAGAATTGATGGCACCATGGACAGCCCTCCAT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTGATCTTTGGGAACTaGCTACAATATCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLIFGN*LQYPHP
Trigger: GGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGTGGACACTGTGGGGTaGGGTTCTTCTCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSVDTVG*GSSLHS
Trigger: AGAGTGAAGAGAAGAACCCCACCCCACAGTGTCCAC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTCTCCTCAGGGATGTaGAGTGCCATCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFSSGM*SAIICR
Trigger: CCTGCAGATGATGGCACTCCACATCCCTGAGGAGAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGTACTTGTTGTCAATaGCGTAGAAGAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSTCCQ*RRRAVR
Trigger: TCTCACAGCTCTTCTACGCCATTGACAACAAGTACT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACAGCAAGCCTTTGACTaGAGCCTCCTTGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTQQAFD*SLLAGL
Trigger: AAGGCCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATGTTGATCTGCTCCTaGGGCGGTGAGCGGAACTCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTMLICS*GGERNS
Trigger: AGAGTTCCGCTCACCGCCCCAGGAGCAGATCAACAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTACCAGAAGGTCCTCATaGAAGTCATACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSTRRSS*KSYSSS
Trigger: AGAGGAGCTGTATGACTTCCATGAGGACCTTCTGGT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCCCCTTTCCCTGTTTaGATGAGATGCATTTCGGGA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSPFPV*MRCISG
Trigger: TCCCGAAATGCATCTCATCCAAACAGGGAAAGGGGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGGACCGGATCCGGATaGCTTCCCCTTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTWTGSG*LPLSLF
Trigger: AAACAGGGAAAGGGGAAGCCATCCGGATCCGGTCCA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACCATGGGTGCCTTGTaGTCAGGGCAGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTMGAL*SGQKLA
Trigger: GGCCAACTTCTGCCCTGACCACAAGGCACCCATGGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCCAGCTTCTTCTTCTTaGCCCAGATATTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSPASSS*PRYCDS
Trigger: ACTATCACAATATCTGGGCCAAGAAGAAGAAGCTGG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGTCAAGGTGTCATATaGTACCAAAAGCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSQGVI*YQKRVA
Trigger: AGCCACCCGCTTTTGGTACCATATGACACCTTGACT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGTCAAGGTGTCATATaGTACCAAAAGCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSQGVI*YQKRVA
Trigger: AGCCACCCGCTTTTGGTACCATATGACACCTTGACT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGAATGCCATTCACTTaGAGGAATTTGAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRMPFT*RNLNRS
Trigger: GGACCTGTTCAAATTCCTCCAAGTGAATGGCATTCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAAGAATTTGATCTCCTaGTCATGGGGAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRKNLIS*SWGDFS
Trigger: AGAAAAGTCTCCCCATGACCAGGAGATCAAATTCTT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGATGGATGTCAGGATaGGAAGCAGAGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRWMSG*EAEPLW
Trigger: CCACAGTGGCTCTGCTTCCCATCCTGACATCCATCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACGATGTGCTCAAAGATaGATGTCAGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRCAQR*MSGWEA
Trigger: TGCTTCCCATCCTGACATCCATCTTTGAGCACATCG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTATCACTTCAATGACATaGGGCATCTCAGTGTACCGG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSITSMT*GISVYR
Trigger: CCGGTACACTGAGATGCCCCATGTCATTGAAGTGAT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACCATGCGGAAGAGCTaGTCAGAATCAGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTMRKS*SESGSG
Trigger: CCCAGATCCTGATTCTGACCAGCTCTTCCGCATGGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGAGCTCCTGGTCGCCTaGAGTACACATGTTCAGACC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIELLVA*STHVQT
Trigger: GGTCTGAACATGTGTACTCCAGGCGACCAGGAGCTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAATGATCTGGTGAAGTaGGTCAGGTTGCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKNDLVK*VRLPLC
Trigger: ACAGAGAGGCAACCTGACCCACTTCACCAGATCATT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCTTGGCCATCATGCTaGAATAGGAAGTGTACAATG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSWPSC*NRKCTM
Trigger: CATTGTACACTTCCTATTCCAGCATGATGGCCAAGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCATCTCACCTTTGCTaGCACTTATCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSSHLC*HLSSEG
Trigger: TCCTTCAGATGATAAGTGCCAGCAAAGGTGAGATGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGTGTCTCAACCACCATaGGGCTCATCTCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSVSQPP*GSSHLC
Trigger: GCAAAGGTGAGATGAGCCCCATGGTGGTTGAGACAC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACATGTTAGCAAATACATaGAGGAACCCGACTACTGCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDMLANT*RNPTTA
Trigger: TGCAGTAGTCGGGTTCCTCCATGTATTTGCTAACAT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGCAGCTCGATCTGACTaGAATCCTGAGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSAARSD*NPEKAS
Trigger: TGAAGCTTTCTCAGGATTCCAGTCAGATCGAGCTGC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCCTTGGCTGGCTCATaGAACCTCTCTACAAAATCC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSLAGS*NLSTKS
Trigger: GGATTTTGTAGAGAGGTTCCATGAGCCAGCCAAGGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACCCTATGTCCTTGGCTaGCTCATGGAACCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVPYVLG*LMEPLY
Trigger: GTAGAGAGGTTCCATGAGCCAGCCAAGGACATAGGG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGATCCCAAACTGAGTaGGGTCGGGCATGTCACCTA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGSQTE*GRACHL
Trigger: TAGGTGACATGCCCGACCCCACTCAGTTTGGGATCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCACCCTTTACAAAGTaGACCAGCTCAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSPFTK*TSSVVT
Trigger: TGTCACCACTGAGCTGGTCCACTTTGTAAAGGGTGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGCCATAAAGGCTTCTaGCTTCTCAGCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGHKGF*LLSLLT
Trigger: GGTCAGAAGGCTGAGAAGCCAGAAGCCTTTATGGCC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGGTAGTGCAATAACTTaGTCTGATAAATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDGSAIT*SDKSPA
Trigger: GGCTGGAGATTTATCAGACCAAGTTATTGCACTACC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGGTTGTAGAAATTCCTaGCCAGGTAGTGCAATAACT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSGCRNS*PGSAIT
Trigger: AGTTATTGCACTACCTGGCCAGGAATTTCTACAACC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCAAAGCACGCAGTGTTaGTGCCATATAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSQSTQC*CHITSA
Trigger: AGCACTGGTTATATGGCACCAACACTGCGTGCTTTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGATGTCATCCTCAGATaGCTGTTCAGTGATATAGAG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDDVILR*LFSDIE
Trigger: CTCTATATCACTGAACAGCCATCTGAGGATGACATC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCCTAGCTTCCAAATATaGTACTTCATGTCGATGGAA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFPSFQI*YFMSME
Trigger: TTCCATCGACATGAAGTACCATATTTGGAAGCTAGG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCTAGCTTCCAAATATaGTACTTCATGTCGATGGAA +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPSFQI*YFMSME
Trigger: TTCCATCGACATGAAGTACCATATTTGGAAGCTAGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCAGTCCTCAGGAACTaGATCTCATCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSVLRN*ISSSPP
Trigger: AGGAGGCGAGGATGAGATCCAGTTCCTGAGGACTGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGTGAATTCATCATTCTaGAGTACCTTTTCACGTGTC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRVNSSF*STFSRV
Trigger: GACACGTGAAAAGGTACTCCAGAATGATGAATTCAC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134358.9
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTTCTTGCAGTGCTCTaGCAGATAAGGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFLAVL*QIRTVP
Trigger: TGGAACAGTCCTTATCTGTCAGAGCACTGCAAGAAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTGATATCGAGAGATaGAGATATCTTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFDIER*RYLSED
Trigger: GTCCTCTGAAAGATATCTTCATCTCTCGATATCAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCTCCTTGATTTCCTTTaGTGCTCGGAAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLLDFL*CSEGEG
Trigger: GCCTTCTCCTTCCGAGCATCAAAGGAAATCAAGGAG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCCATATCTCTTTTGTaGCTGGAATCTAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSISLL*LESNFS
Trigger: GGAGAAATTAGATTCCAGTCACAAAAGAGATATGGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCAGAATCCCCGTACTTaGTTTCTGGAACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSQNPRT*FLELPC
Trigger: GCATGGGAGTTCCAGAAATCAAGTACGGGGATTCTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTTCTTGTACTGTGGTaGACCTTCAGCAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLLVLW*TFSNSQ
Trigger: CTGGGAGTTGCTGAAGGTTCACCACAGTACAAGAAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGCAAGGGGCATAGCCTaGGGGAGGCAGGAACTTAAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFARGIA*GRQELK
Trigger: TTTAAGTTCCTGCCTCCCTCAGGCTATGCCCCTTGC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGTTTCAGGGAGCTTTaGAAACTCCACAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSFREL*KLHKAG
Trigger: CCCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTTCAAGGTTTCCGTTaGCATCTGCAGGTTATAATT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFQGFR*HLQVII
Trigger: AATTATAACCTGCAGATGTCAACGGAAACCTTGAAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTCAAGGTTTCCGTTaGCATCTGCAGGTTATAATT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFQGFR*HLQVII
Trigger: AATTATAACCTGCAGATGTCAACGGAAACCTTGAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTTCAAGGTTTCCGTTaGCATCTGCAGGTTATAATT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFQGFR*HLQVII
Trigger: AATTATAACCTGCAGATGTCAACGGAAACCTTGAAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGTTTTTGGGAAGCTTaGCTTTCTTTAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSFWEA*LSLDPL
Trigger: AAGAGGATCTAAAGAAAGTCAAGCTTCCCAAAAACT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGTTTTTGGGAAGCTTaGCTTTCTTTAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSFWEA*LSLDPL
Trigger: AAGAGGATCTAAAGAAAGTCAAGCTTCCCAAAAACT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCCACTAAAATTTCTTaGGGTGGTAACAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSTKIS*GGNSFT
Trigger: TGTGAAGCTGTTACCACCTCAAGAAATTTTAGTGGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGACAGGGACTGTGACTaGAAGAGGAATGACATTCAA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKDRDCD*KRNDIQ
Trigger: TTGAATGTCATTCCTCTTTCAGTCACAGTCCCTGTC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCCAACCCAGACACATaGTGGGTCCTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSNPDT*WVLPSK
Trigger: TTTGCTGGGCAGGACCCATCATGTGTCTGGGTTGGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCAGGGCTTTTGTCTTaGGAATCTGCAAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSGLLS*ESARES
Trigger: AGATTCCCTTGCAGATTCTCAAGACAAAAGCCCTGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCAGTACCCAGCACATTaGCCATCACTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSQYPAH*PSLPSQ
Trigger: CTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTTTCCCTGTTTGGATaGGATGCATTTCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLSLFG*DAFREH
Trigger: GTGCTCCCGAAATGCATCTCATCCAAACAGGGAAAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACATGGAAGGTCTCAAATaGTTGCAAATGGCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDMEGLK*LQMASK
Trigger: TTTGCTAGCCATTTGCAATCATTTGAGACCTTCCAT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGAAGAGCTTCTCAGTaGGGTGCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRRASQ*GAAPPP
Trigger: TGGAGGAGGAGCTGCACCTCACTGAGAAGCTCTTCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCTGAGAAACACCTTTaGTCTGCGTTCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSEKHL*SAFGNG
Trigger: CCCATTCCCGAACGCAGATCAAAGGTGTTTCTCAGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTTGGTGTTGAAGACTaGGAGGGGATTGTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFGVED*EGIVAV
Trigger: AACCGCCACAATCCCCTCTCAGTCTTCAACACCAAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCCCTCTTGAAGTTATaGGATTTACACCACAGAATG +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSLLKL*DLHHRM
Trigger: CATTCTGTGGTGTAAATCTCATAACTTCAAGAGGGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTTGCTCTTCCCTCTTaGAGTTATGAGATTTACACC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFALPS*SYEIYT
Trigger: GGTGTAAATCTCATAACTTCAAGAGGGAAGAGCAAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTATTTTGCGAGTGAGATaGGCTCCTGGTCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFILRVR*APGRLE
Trigger: CTCCAGGCGACCAGGAGCTCATCTCACTCGCAAAAT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACCGTTTCCGTTGCTTTaGCAACAATTTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKPFPLL*QQFVPY
Trigger: GTATGGCACAAATTGTTGTCAAAGCAACGGAAACGG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTGGCACTTATCATCTaGAGGACCATCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLALII*RTISAA
Trigger: TGCTGCAGAGATGGTCCTTCAGATGATAAGTGCCAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAACCAATAGAAATCGCTaGTTGATTCCTGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKTNRNR*LIPADA
Trigger: TGCGTCTGCAGGAATCAATCAGCGATTTCTATTGGT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATCACCACCATGTCCTaGAGGAGATCCAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSITTMS*RRSKSS
Trigger: GGAACTCTTGGATCTCCTTCAGGACATGGTGGTGAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCTTGGCCCCACCCATaGTCTCAATTCGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSWPHP*SQFDPG
Trigger: ACCTGGGTCGAATTGAGATCATGGGTGGGGCCAAGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTCGACTGGATTCACTaGTCTCAAAATAAACACGCT +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFDWIH*SQNKHA
Trigger: AGCGTGTTTATTTTGAGATCAGTGAATCCAGTCGAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCTTCAGAAACTTGGTaGCATTTCTCTTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSSETW*HFSLLR
Trigger: TCTCAGTAAAGAGAAATGTCACCAAGTTTCTGAAGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCAGATGGCTGTTCAGTaGTATAGAGGCCATCAAACT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSQMAVQ*YRGHQT
Trigger: AGTTTGATGGCCTCTATATCACTGAACAGCCATCTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACAGATGGCTGTTCAGTaGTATAGAGGCCATCAAACT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKQMAVQ*YRGHQT
Trigger: AGTTTGATGGCCTCTATATCACTGAACAGCCATCTG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGATCTCCATACTTGTTaGTCACCTTTCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDDLHTC*SPFSSQ
Trigger: TTGTGAAGAGAAAGGTGATCAACAAGTATGGAGATC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGCCAATGCCGCAGATaGAGCACTTGGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTCQCRR*STWSPC
Trigger: ACATGGAGACCAAGTGCTTCATCTGCGGCATTGGCA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTGTGAATGTTTGCAATaGACTGGAGTACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHCECLQ*TGVQLH
Trigger: ATGAAGTTGTACTCCAGTGCATTGCAAACATTCACA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTACTGCAACCCCATTaGAGAGACAGAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLLQPH*RDRGST
Trigger: TGTGCTCCCTCTGTCTCTGCAATGGGGTTGCAGTAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTGGTTGGCTCTTACTaGAACCCCATTGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLVGSY*NPIAET
Trigger: TGTCTCTGCAATGGGGTTGCAGTAAGAGCCAACCAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCATCACCGACACCATTaGCTCCCCATCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFHHRHH*LPILLH
Trigger: GTGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCCACAAGGCAGGGATaGTGCCTTTTGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSTRQG*CLLLSS
Trigger: GGATGACAACAAAAGGCAGCATCCCTGCCTTGTGGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTGTTTGATTTCTTGGTaGGCTCATCTAGTAATGCAT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRCLISW*AHLVMH
Trigger: ATGCATTACTAGATGAGCGCACCAAGAAATCAAACA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTGTTTGATTTCTTGGTaGGCTCATCTAGTAATGCAT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFCLISW*AHLVMH
Trigger: ATGCATTACTAGATGAGCGCACCAAGAAATCAAACA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTCCAAAATACCCACTaGCTTGATGCCAACGCTGAC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVQNTH*LDANAD
Trigger: GTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGAGGGCTGTCCATGGTaGCATCAATTCTCACAACCT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKEGCPW*HQFSQP
Trigger: AGGTTGTGAGAATTGATGGCACCATGGACAGCCCTC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCTGAGAAGGACAACATaGCCATTGCCAGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLRRTT*PLPDLE
Trigger: TTCTAGATCTGGCAATGGGCATGTTGTCCTTCTCAG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTCTCCAGCCTCCACTaGCTTTTCCTCTGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFSSLH*LFLCVG
Trigger: ACCCACGCAGAGGAAAAGGCAGTGGAGGCTGGAGAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCTTCCTCTGTTGGCTaGTCCTTCTCAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISSSVG*SFSGLG
Trigger: ACCCAAGCCTGAGAAGGAGCAGCCAACAGAGGAAGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGCCTGTATATTGTCTaGAGTGTAGAATCAATCAGA +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSLYIV*SVESIR
Trigger: TCTGATTGATTCTACACTGCAGACAATATACAGGCT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGCATCCACTGAGACCTaGTTCTCCAATGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKASTET*FSNVAV
Trigger: TACAGCCACATTGGAGAAGCAGGTCTCAGTGGATGC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGCATCCACTGAGACCTaGTTCTCCAATGTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSASTET*FSNVAV
Trigger: TACAGCCACATTGGAGAAGCAGGTCTCAGTGGATGC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCAAGGGAGTAGAGGCTaGACAGAATGTGGTAGCATG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKQGSRG*TECGSM
Trigger: CATGCTACCACATTCTGTGCAGCCTCTACTCCCTTG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACAAGGGAGTAGAGGCTaGACAGAATGTGGTAGCATG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVQGSRG*TECGSM
Trigger: CATGCTACCACATTCTGTGCAGCCTCTACTCCCTTG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGGCATAGAGGTCCCTaGAGAGGACAGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRHRGP*RGQQTH
Trigger: ATGAGTTTGCTGTCCTCTGCAGGGACCTCTATGCCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGGCATAGAGGTCCCTaGAGAGGACAGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRHRGP*RGQQTH
Trigger: ATGAGTTTGCTGTCCTCTGCAGGGACCTCTATGCCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAAAGGCTGTTCCACCTaGTCAAGGTGGAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKKGCST*SRWKRA
Trigger: AGCTCTCTTCCACCTTGAGCAGGTGGAACAGCCTTT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAAAGGCTGTTCCACCTaGTCAAGGTGGAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVKGCST*SRWKRA
Trigger: AGCTCTCTTCCACCTTGAGCAGGTGGAACAGCCTTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTTGACAACAATTTGTaGCATACAGCCTTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFDNNL*HTAFLD
Trigger: GTCCAAAAAGGCTGTATGGCACAAATTGTTGTCAAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAGCTCTTGGCCATCATaGTGGAATAGGAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSSWPS*WNRKCT
Trigger: TGTACACTTCCTATTCCAGCATGATGGCCAAGAGCT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAACGCTCGTGCAGCCTTaGTTGTTGATACAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKTLVQP*LLIQCF
Trigger: AAAACACTGTATCAACAAGCAAGGCTGCACGAGCGT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGGACACTGCAGGACTaGATAAGACCAGAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRTLQD*IRPERL
Trigger: AAGCCTCTCTGGTCTTATGCAGTCCTGCAGTGTCCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAATTTGCTTGGTGACTaGCAGAGCTTTAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFNLLGD*QSFREI
Trigger: AATTTCTCTAAAGCTCTGGCAGTCACCAAGCAAATT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTGGCTCAGTCACTTCTaGCCTGTCAGTTTCTATTAC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSWLSHF*PVSFYY
Trigger: GTAATAGAAACTGACAGGGCAGAAGTGACTGAGCCA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACCAAGCGGTCCCACTaGCCCTTGATGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTKRSH*PLMSSS
Trigger: TGAGGATGACATCAAGGGGCAGTGGGACCGCTTGGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAACTTGGCTTCTGAGGTaGGTTCCAAGAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTTWLLR*VPRSTG
Trigger: GCCTGTGCTTCTTGGAACCCACCTCAGAAGCCAAGT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCTGGGATCTTGACGTaGTCAAGCACGTTAGATACA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSGILT*SSTLDT
Trigger: TGTATCTAACGTGCTTGACCACGTCAAGATCCCAGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCAGGCGGGAAGTTTTaGCATCTTGTGCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPGGKF*HLVLCR
Trigger: CCTACAAAGCACAAGATGCCAAAACTTCCCGCCTGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTGCATCTCGTCCTCTaGTGGCTGGAAGTAGGCTAT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLHLVL*WLEVGY
Trigger: ATAGCCTACTTCCAGCCACCAGAGGACGAGATGCAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCACAGATCAGATTCTaGTTGGCTCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSQIRF*LALTAT
Trigger: GGTTGCAGTAAGAGCCAACCAGAATCTGATCTGTGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGACTTGAGCAGATGCTaGTTGATGGAAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSDLSRC*LMEATA
Trigger: AGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGACTTGAGCAGATGCTaGTTGATGGAAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVDLSRC*LMEATA
Trigger: AGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCTGGCTTATAGCCATTaGACATCATATAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFLAYSH*TSYSFW
Trigger: CCAAAAACTATATGATGTCCAATGGCTATAAGCCAG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGCCCCAGAGAGCAAATaGGCACAAAACCGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSAPESK*AQNRSQ
Trigger: TTGAGAACGGTTTTGTGCCCATTTGCTCTCTGGGGC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTCATGCGGCCAATCTaGGATAGCCCCAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFMRPI*DSPREQ
Trigger: TTGCTCTCTGGGGCTATCCCAGATTGGCCGCATGAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCACATTCACAAATGTTaGGAGGCGCTTGCTAAACCA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSHIHKC*EALAKP
Trigger: TGGTTTAGCAAGCGCCTCCCAACATTTGTGAATGTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCTCCGACTTGATCTTTaGGAACTGGCTACAATATCC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLRLDL*ELATIS
Trigger: GGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTGGACACTGTGGGGTaGGGTTCTTCTCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVDTVG*GSSLHS
Trigger: AGAGTGAAGAGAAGAACCCCACCCCACAGTGTCCAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTGGACACTGTGGGGTaGGGTTCTTCTCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVDTVG*GSSLHS
Trigger: AGAGTGAAGAGAAGAACCCCACCCCACAGTGTCCAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATCAGGAGGAGAATCTaGCGAACATCATCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSIRRRI*RTSSSS
Trigger: CGACGACGATGATGTTCGCCAGATTCTCCTCCTGAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTATGTTGATCTGCTCCTaGGGCGGTGAGCGGAACTCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFMLICS*GGERNS
Trigger: AGAGTTCCGCTCACCGCCCCAGGAGCAGATCAACAT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTTTCAGGGACTCTCTaGCAGGCCAGCGATAAATTT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFSGTL*QASDKF
Trigger: AAATTTATCGCTGGCCTGCCAGAGAGTCCCTGAAAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGGCTTCTCCTTCTTTaGTCCTTTCCACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRLLLL*SFPLSS
Trigger: GCTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAATTTGAACAGGTCCTaGGCCTTCTCTCGATCCCTG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKNLNRS*AFSRSL
Trigger: CAGGGATCGAGAGAAGGCCCAGGACCTGTTCAAATT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGCTTGCAGAATAGGCTaGCCACCATTTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKACRIG*PPFLSL
Trigger: AAGAGAAAGAAATGGTGGCCAGCCTATTCTGCAAGC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATGGATGTCAGGATaGGAAGCAGAGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRWMSG*EAEPLW
Trigger: CCACAGTGGCTCTGCTTCCCATCCTGACATCCATCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTGCTGATAATTGGCTaGGCATACACTGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLLIIG*AYTAMR
Trigger: GCGCATCGCAGTGTATGCCCAGCCAATTATCAGCAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTGCTGATAATTGGCTaGGCATACACTGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLLIIG*AYTAMR
Trigger: GCGCATCGCAGTGTATGCCCAGCCAATTATCAGCAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCATAGCGGATCAGCATaGGGTAGAAGGCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSHSGSA*GRRHRG
Trigger: ACCTCTATGCCTTCTACCCCATGCTGATCCGCTATG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACCATGCGGAAGAGCTaGTCAGAATCAGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITMRKS*SESGSG
Trigger: CCCAGATCCTGATTCTGACCAGCTCTTCCGCATGGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAACCATGCGGAAGAGCTaGTCAGAATCAGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTTMRKS*SESGSG
Trigger: CCCAGATCCTGATTCTGACCAGCTCTTCCGCATGGT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTCTTCTTCCGTTCCTaGTCCTGTCCTCCAGACTTT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKVFFRS*SCPPDF
Trigger: AAAGTCTGGAGGACAGGACCAGGAACGGAAGAAGAC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGTGAGATGAGCTCCTaGTCGCCTGGAGTACACATG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSEMSS*SPGVHM
Trigger: CATGTGTACTCCAGGCGACCAGGAGCTCATCTCACT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGTGAGATGAGCTCCTaGTCGCCTGGAGTACACATG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISEMSS*SPGVHM
Trigger: CATGTGTACTCCAGGCGACCAGGAGCTCATCTCACT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCACTCTGACAGCTCTTaGCCATCATGCTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSHSDSS*PSCWNR
Trigger: CCTATTCCAGCATGATGGCCAAGAGCTGTCAGAGTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTGTCTCAACCACCATaGGGCTCATCTCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVSQPP*GSSHLC
Trigger: GCAAAGGTGAGATGAGCCCCATGGTGGTTGAGACAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTGTCTCAACCACCATaGGGCTCATCTCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVSQPP*GSSHLC
Trigger: GCAAAGGTGAGATGAGCCCCATGGTGGTTGAGACAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTGCCTCCGTTCAGAATaGCAATCCCCAGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKICLRSE*QSPASV
Trigger: CACTGAAGCTGGGGATTGCCATTCTGAACGGAGGCA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACCCTATGTCCTTGGCTaGCTCATGGAACCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTPYVLG*LMEPLY
Trigger: GTAGAGAGGTTCCATGAGCCAGCCAAGGACATAGGG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGCCATAAAGGCTTCTaGCTTCTCAGCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGHKGF*LLSLLT
Trigger: GGTCAGAAGGCTGAGAAGCCAGAAGCCTTTATGGCC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGCCATAAAGGCTTCTaGCTTCTCAGCCTTCTGACC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGHKGF*LLSLLT
Trigger: GGTCAGAAGGCTGAGAAGCCAGAAGCCTTTATGGCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGAGAGATGATGGTGTaGACAATGGCCAAAGCACGC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSREMMV*TMAKAR
Trigger: GCGTGCTTTGGCCATTGTCCACACCATCATCTCTCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGAGAGATGATGGTGTaGACAATGGCCAAAGCACGC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKREMMV*TMAKAR
Trigger: GCGTGCTTTGGCCATTGTCCACACCATCATCTCTCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCTCATCTTCAACCCTaGGAGATTTCATTAAAATGG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPHLQP*EISLKW
Trigger: CCATTTTAATGAAATCTCCCAGGGTTGAAGATGAGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134358.9
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAATGTACTTGGCTTCTaGGGTGGGTTCCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSNVLGF*GGFQEA
Trigger: TGCTTCTTGGAACCCACCTCAGAAGCCAAGTACATT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGTCAAACATTCATCATaGCCGTGGAAAAGACGAACT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKVKHSS*PWKRRT
Trigger: AGTTCGTCTTTTCCACGGTCATGATGAATGTTTGAC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTCCTTGATTTCCTTTaGTGCTCGGAAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILLDFL*CSEGEG
Trigger: GCCTTCTCCTTCCGAGCATCAAAGGAAATCAAGGAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACTCCTTGATTTCCTTTaGTGCTCGGAAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLLDFL*CSEGEG
Trigger: GCCTTCTCCTTCCGAGCATCAAAGGAAATCAAGGAG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAATCTAATTTCTCCTTaGTTTCCTTTGATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDNLISP*FPLMLG
Trigger: TCCGAGCATCAAAGGAAATCAAGGAGAAATTAGATT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCAGAATCCCCGTACTTaGTTTCTGGAACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIQNPRT*FLELPC
Trigger: GCATGGGAGTTCCAGAAATCAAGTACGGGGATTCTG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTTGTGCTTTGTAGGTaGCCCAAAGGCCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLVLCR*PKGHWL
Trigger: TAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCCATGTGGCCTTCCTaGTGGAGTATGACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSMWPS*WSMTFL
Trigger: AAGAAAGGTCATACTCCATCAGGAAGGCCACATGGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCCATGTGGCCTTCCTaGTGGAGTATGACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSMWPS*WSMTFL
Trigger: AAGAAAGGTCATACTCCATCAGGAAGGCCACATGGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGCACAGGTTGTCCATTaGTTCGGAAAGAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSAQVVH*FGKKCW
Trigger: CCAGCATTTCTTTCCGAATCAATGGACAACCTGTGC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTACTTTGACACCAGCTaGAAAACTCATCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSYFDTS*KTHHRE
Trigger: TTCCCTGTGATGAGTTTTTCAGCTGGTGTCAAAGTA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACACGCTTATATTCTTTaGCAGGCTCCAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKHAYIL*QAPISS
Trigger: AGATGAGATTGGAGCCTGTCAAAGAATATAAGCGTG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCACGCTTATATTCTTTaGCAGGCTCCAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSHAYIL*QAPISS
Trigger: AGATGAGATTGGAGCCTGTCAAAGAATATAAGCGTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGTTTCAGGGAGCTTTaGAAACTCCACAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSFREL*KLHKAG
Trigger: CCCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTTCCCCATTCAGTGTaGAGACCATGGAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVPHSV*RPWRHH
Trigger: ATGATGCCTCCATGGTCTTCACACTGAATGGGGAAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTACATGGTATAAAACTTaGAGGTACTGGCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSTWYKT*RYWHLS
Trigger: GGACAGATGCCAGTACCTTCAAGTTTTATACCATGT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGACCTCTATGTGGGGATaGTCCTTAGGCACATTCACA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKTSMWG*SLGTFT
Trigger: TGTGAATGTGCCTAAGGATCATCCCCACATAGAGGT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTACATTGCTCCGACTTaGTCTTTGGGAACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSYIAPT*SLGTGY
Trigger: GTAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTCCTTCCCATTAGCTaGGAAGGACAACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFLPIS*EGQHAH
Trigger: ATGGGCATGTTGTCCTTCTCAGCTAATGGGAAGGAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACAGTTCTCTCCCAGGTaGAAGTTGAGAAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVQFSPR*KLRSML
Trigger: CAACATGCTTCTCAACTTTCACCTGGGAGAGAACTG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTCTCCGAAGGAGGTTaGACATCATCCTCACCAGTT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVSEGG*TSSSPV
Trigger: AACTGGTGAGGATGATGTTCAACCTCCTTCGGAGAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCAGTACCCAGCACATTaGCCATCACTTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIQYPAH*PSLPSQ
Trigger: CTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTCCATCATCCTGTGTaGCTTCTGTCTTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLHHPV*LLSCNP
Trigger: AGGGTTACAAGACAGAAGTCACACAGGATGATGGAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTCCATCATCCTGTGTaGCTTCTGTCTTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLHHPV*LLSCNP
Trigger: AGGGTTACAAGACAGAAGTCACACAGGATGATGGAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACTTTCCCTGTTTGGATaGGATGCATTTCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLSLFG*DAFREH
Trigger: GTGCTCCCGAAATGCATCTCATCCAAACAGGGAAAG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCCATCTGCATCCACTaGGACCTGCTTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSICIH*DLLLQC
Trigger: ACATTGGAGAAGCAGGTCTCAGTGGATGCAGATGGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACAAGCCCATTTATCATaGGAATGCTCAGCATACTTG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKQAHLS*ECSAYL
Trigger: CAAGTATGCTGAGCATTCTCATGATAAATGGGCTTG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCTGAGAAACACCTTTaGTCTGCGTTCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSEKHL*SAFGNG
Trigger: CCCATTCCCGAACGCAGATCAAAGGTGTTTCTCAGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACTCGGCCAAGTCATTaGTTTCCTTCATCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVTRPSH*FPSSGL
Trigger: AAGGCCTGATGAAGGAAATCAATGACTTGGCCGAGT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGCAAGATCACTTCAATaGCATGGGGCATCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKARSLQ*HGASQC
Trigger: ACACTGAGATGCCCCATGTCATTGAAGTGATCTTGC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATTTACACCACAGAATaGAGACCTCGGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIIYTTE*RPRPPC
Trigger: GCATGGTGGCCGAGGTCTTCATTCTGTGGTGTAAAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATAACACTGCCACATTaGACCCTATGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKITLPH*TLCPWL
Trigger: CAGCCAAGGACATAGGGTTCAATGTGGCAGTGTTAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATAACACTGCCACATTaGACCCTATGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSITLPH*TLCPWL
Trigger: CAGCCAAGGACATAGGGTTCAATGTGGCAGTGTTAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCTTCAGAAACTTGGTaGCATTTCTCTTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSSETW*HFSLLR
Trigger: TCTCAGTAAAGAGAAATGTCACCAAGTTTCTGAAGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGGAGAAGAACACCTTaGCCAGTTCCTTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRRRTP*PVPLHS
Trigger: TGAGTGCAAAGGAACTGGTCAAGGTGTTCTTCTCCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAATTGTGAAGAGCAACTaGAAGAGGCCCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVIVKSN*KRPTNS
Trigger: GCTGTTTGTGGGCCTCTTTCAGTTGCTCTTCACAAT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATTGTGAAGAGCAACTaGAAGAGGCCCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKIVKSN*KRPTNS
Trigger: GCTGTTTGTGGGCCTCTTTCAGTTGCTCTTCACAAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCAAAGAGGTCTGACATaGTGTCTGTATCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKQRGLT*CLYLLP
Trigger: AGGCAGGAGATACAGACATCATGTCAGACCTCTTTG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGTGAATGTTTGCAATaGACTGGAGTACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSCECLQ*TGVQLH
Trigger: ATGAAGTTGTACTCCAGTGCATTGCAAACATTCACA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTGGCAAGCATTTCTTaGAGTGCTCTGACAGATAAG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLASIS*SALTDK
Trigger: CTTATCTGTCAGAGCACTGCAAGAAATGCTTGCCAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCCTGCTGGCACCTCTaGAGTGTTAATCCGTCATCC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSCWHL*SVNPSS
Trigger: GGATGACGGATTAACACTGCAGAGGTGCCAGCAGGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGTTTGTCTTCATGTTaGATCTCGTCCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSCLSSC*ISSSGG
Trigger: GCCACCAGAGGACGAGATGCAACATGAAGACAAACA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGTTTAATCGATCAATaGAATTCAATACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDCLIDQ*NSIRGP
Trigger: TGGCCCTCGTATTGAATTGCATTGATCGATTAAACA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTTCTTTCCAGGCCATaGCACTCTCTTCCCTTACGA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFLSRP*HSLPLR
Trigger: TCGTAAGGGAAGAGAGTGGCATGGCCTGGAAAGAAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTACTGCAACCCCATTaGAGAGACAGAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLLQPH*RDRGST
Trigger: TGTGCTCCCTCTGTCTCTGCAATGGGGTTGCAGTAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACTGGTTGGCTCTTACTaGAACCCCATTGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLVGSY*NPIAET
Trigger: TGTCTCTGCAATGGGGTTGCAGTAAGAGCCAACCAG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCCACAAGGCAGGGATaGTGCCTTTTGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISTRQG*CLLLSS
Trigger: GGATGACAACAAAAGGCAGCATCCCTGCCTTGTGGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTAATTCTGTCCTTTaGCCAAACATTGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFNSVL*PNIVSI
Trigger: AATGCTCACAATGTTTGGGCAAAGGACAGAATTAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTCCAAAATACCCACTaGCTTGATGCCAACGCTGAC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVQNTH*LDANAD
Trigger: GTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGAGGGCTGTCCATGGTaGCATCAATTCTCACAACCT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIEGCPW*HQFSQP
Trigger: AGGTTGTGAGAATTGATGGCACCATGGACAGCCCTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGGCTGAAGGAAGACTaGAGGGAACACTTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRLKED*REHFGV
Trigger: AACACCAAAGTGTTCCCTGCAGTCTTCCTTCAGCCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGGCTGAAGGAAGACTaGAGGGAACACTTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSRLKED*REHFGV
Trigger: AACACCAAAGTGTTCCCTGCAGTCTTCCTTCAGCCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCACTGCCTTTTCCTCTaGGTGGGTCACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKHCLFL*VGHFFF
Trigger: GAAAAAGAAGTGACCCACGCAGAGGAAAAGGCAGTG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCACTGCCTTTTCCTCTaGGTGGGTCACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSHCLFL*VGHFFF
Trigger: GAAAAAGAAGTGACCCACGCAGAGGAAAAGGCAGTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGCGGAACTTCTGATTTaGCTGCAGCTTGGACACGTA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIAELLI*LQLGHV
Trigger: TACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCACAGTCTCATGCATaGCGAGGACTCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSQSHA*RGLSSG
Trigger: ACCTGATGAGAGTCCTCGGCATGCATGAGACTGTGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGCCTGTATATTGTCTaGAGTGTAGAATCAATCAGA +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSLYIV*SVESIR
Trigger: TCTGATTGATTCTACACTGCAGACAATATACAGGCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAAGGTCTCAAATGATTaGAAATGGCTAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHKVSND*KWLANI
Trigger: AATGTTTGCTAGCCATTTGCAATCATTTGAGACCTT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGACGACGCAGGAGTTaGTGTAACATGGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTRRRRS*CNMEGL
Trigger: GAGACCTTCCATGTTACAGCAACTCCTGCGTCGTCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGACGACGCAGGAGTTaGTGTAACATGGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRRRRS*CNMEGL
Trigger: GAGACCTTCCATGTTACAGCAACTCCTGCGTCGTCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGCATTTTCAAAGAATaGTCGCAGCCCGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSIFKE*SQPGFH
Trigger: GTGAAAGCCGGGCTGCGAGCATTCTTTGAAAATGCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGTAGGACAGGTAGTTaGAGAGCATGGGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSRTGS*RAWARS
Trigger: TGATCTTGCCCATGCTCTGCAACTACCTGTCCTACT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTGACATCTTGCTTTTaGTGTCTCCAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLTSCF*CLQLKM
Trigger: CATTTTTAACTGGAGACAGCAAAAGCAAGATGTCAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGACTTCTCCTGCAGGTaGAGGTTATTCCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVDFSCR*RLFRRC
Trigger: ACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTTGACAACAATTTGTaGCATACAGCCTTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFDNNL*HTAFLD
Trigger: GTCCAAAAAGGCTGTATGGCACAAATTGTTGTCAAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCTAGCATTTTCTGTTaGACACCAGCATTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSSIFC*TPALPP
Trigger: CGGAGGCAATGCTGGTGTGCAACAGAAAATGCTAGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCTAGCATTTTCTGTTaGACACCAGCATTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSSIFC*TPALPP
Trigger: CGGAGGCAATGCTGGTGTGCAACAGAAAATGCTAGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGGACACTGCAGGACTaGATAAGACCAGAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRTLQD*IRPERL
Trigger: AAGCCTCTCTGGTCTTATGCAGTCCTGCAGTGTCCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACCCACTTCAGGCCCTTaGTTTAAGCCACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTPTSGP*FKPPSF
Trigger: GAAAGAAGGTGGCTTAAAGCAAGGGCCTGAAGTGGG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCATCTCTGCTGCCTGTaGTTTTCTTTTCTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSHLCCL*FSFLPH
Trigger: GTGCGGAAGAAAAGAAAAGCACAGGCAGCAGAGATG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGGTCTTAAAGCCCATTaGAATATCCAACAGATGAGC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSGLKAH*NIQQMS
Trigger: GCTCATCTGTTGGATATTGCAATGGGCTTTAAGACC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACCAATGCCTCCACCTaGTCTTACGCCCACGTACAT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTNAST*SYAHVH
Trigger: ATGTACGTGGGCGTAAGAGCAGGTGGAGGCATTGGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCAATTTCATCACCAATaGCTCCACCTGCTCTTACGC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSQFHHQ*LHLLLR
Trigger: GCGTAAGAGCAGGTGGAGGCATTGGTGATGAAATTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAACAGGCTTCTCCTGTaGCATGTTCCCGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFNRLLL*HVPADL
Trigger: TAGGTCTGCGGGAACATGCCACAGGAGAAGCCTGTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATTCTGATCTGTAGATaGTATCGTCAAACATTCATC +
Preference number: 4 (lower is better)
Translates to: QSLARVLLHDVQVFKISHILICR*YRQTFI
Trigger: GATGAATGTTTGACGATACCATCTACAGATCAGAAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATGTAGAAGAAGGCCTTaGTCTTCTGTCAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVCRRRP*SSVKAK
Trigger: CTTGGCCTTGACAGAAGACCAAGGCCTTCTTCTACA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGAAGGAGAAGGCTGTaGATTTGGTGTCGGATTTTC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGRRRL*IWCRIF
Trigger: GAAAATCCGACACCAAATCCACAGCCTTCTCCTTCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCCAGGCGGGAAGTTTTaGCATCTTGTGCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIPGGKF*HLVLCR
Trigger: CCTACAAAGCACAAGATGCCAAAACTTCCCGCCTGG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCCCAGGAAGATGTTTaGCCGGATGCTGGTGACATC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSQEDV*PDAGDI
Trigger: GATGTCACCAGCATCCGGCCAAACATCTTCCTGGGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGGAGAGGAACTGTGTaGTACCCAATAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGRGTV*YPIDLS
Trigger: TGAGAGATCTATTGGGTACCACACAGTTCCTCTCCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGTATCTATGGGACATaGGATGAAAGAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGIYGT*DERGLG
Trigger: TCCCAAGCCTCTTTCATCCCATGTCCCATAGATACC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTATCCCCCAAAGCTCGTaGATGTTCTCAGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFIPQSS*MFSASL
Trigger: CAGACTGGCTGAGAACATCCACGAGCTTTGGGGGAT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCCCTGTTTGATTTCTTaGTGCGCTCATCTAGTAATG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSPCLIS*CAHLVM
Trigger: CATTACTAGATGAGCGCACCAAGAAATCAAACAGGG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATGGAGGGCTGTCCATaGTGCCATCAATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSMEGCP*CHQFSQ
Trigger: TTGTGAGAATTGATGGCACCATGGACAGCCCTCCAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTGATCTTTGGGAACTaGCTACAATATCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLIFGN*LQYPHP
Trigger: GGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTGATCTTTGGGAACTaGCTACAATATCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLIFGN*LQYPHP
Trigger: GGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTGGACACTGTGGGGTaGGGTTCTTCTCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVDTVG*GSSLHS
Trigger: AGAGTGAAGAGAAGAACCCCACCCCACAGTGTCCAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGTACTTGTTGTCAATaGCGTAGAAGAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSTCCQ*RRRAVR
Trigger: TCTCACAGCTCTTCTACGCCATTGACAACAAGTACT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTAGCATTGGCCAGGTaGATGCTAATGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLALAR*MLMSRS
Trigger: TGACCTGCTCATTAGCATCCACCTGGCCAATGCTAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATCAGGAGGAGAATCTaGCGAACATCATCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTIRRRI*RTSSSS
Trigger: CGACGACGATGATGTTCGCCAGATTCTCCTCCTGAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACTCTCTTGTCTTTCTaGCAGTTAGGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTLLSF*QLGLQT
Trigger: TGTCTGCAGCCCTAACTGCCAGAAAGACAAGAGAGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGCTAGCAACCATCTTTaGGAAGGCAATCTGCGACTT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKASNHL*EGNLRL
Trigger: AAGTCGCAGATTGCCTTCCCAAAGATGGTTGCTAGC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCCCCTTTCCCTGTTTaGATGAGATGCATTTCGGGA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSPFPV*MRCISG
Trigger: TCCCGAAATGCATCTCATCCAAACAGGGAAAGGGGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCCCCTTTCCCTGTTTaGATGAGATGCATTTCGGGA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSPFPV*MRCISG
Trigger: TCCCGAAATGCATCTCATCCAAACAGGGAAAGGGGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGGAGTTGCTGTAACATaGAAGGTCTCAAATGATTGC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKGVAVT*KVSNDC
Trigger: GCAATCATTTGAGACCTTCCATGTTACAGCAACTCC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTACTGGTCGACCAGTaGGAGGAGAACTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVLVDQ*EENFGK
Trigger: TTTGCCAAAGTTCTCCTCCCACTGGTCGACCAGTAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATCTGCGTTCGGGAATaGGTAAACTTCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIICVRE*VNFPSF
Trigger: GAAGCTGGGGAAGTTTACCCATTCCCGAACGCAGAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCGATGTGCTCAAAGATaGATGTCAGGATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRCAQR*MSGWEA
Trigger: TGCTTCCCATCCTGACATCCATCTTTGAGCACATCG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGCTTTGCTGATAATTaGCTGGGCATACACTGCGAT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGFADN*LGIHCD
Trigger: ATCGCAGTGTATGCCCAGCCAATTATCAGCAAAGCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACATAGCGGATCAGCATaGGGTAGAAGGCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTHSGSA*GRRHRG
Trigger: ACCTCTATGCCTTCTACCCCATGCTGATCCGCTATG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCATAGCGGATCAGCATaGGGTAGAAGGCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIHSGSA*GRRHRG
Trigger: ACCTCTATGCCTTCTACCCCATGCTGATCCGCTATG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTGCCATTTCACAGCTaGGTCATCAGACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLPFHS*VIRLLL
Trigger: CAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTGCCATTTCACAGCTaGGTCATCAGACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLPFHS*VIRLLL
Trigger: CAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTGCCATTTCACAGCTaGGTCATCAGACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLPFHS*VIRLLL
Trigger: CAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCTTGGCCATCATGCTaGAATAGGAAGTGTACAATG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSWPSC*NRKCTM
Trigger: CATTGTACACTTCCTATTCCAGCATGATGGCCAAGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCATCTCACCTTTGCTaGCACTTATCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSSHLC*HLSSEG
Trigger: TCCTTCAGATGATAAGTGCCAGCAAAGGTGAGATGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTGCCTCCGTTCAGAATaGCAATCCCCAGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFCLRSE*QSPASV
Trigger: CACTGAAGCTGGGGATTGCCATTCTGAACGGAGGCA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAATGTTAGCAAATACATaGAGGAACCCGACTACTGCA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKMLANT*RNPTTA
Trigger: TGCAGTAGTCGGGTTCCTCCATGTATTTGCTAACAT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCACCCTTTACAAAGTaGACCAGCTCAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSPFTK*TSSVVT
Trigger: TGTCACCACTGAGCTGGTCCACTTTGTAAAGGGTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGGTAGTGCAATAACTTaGTCTGATAAATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSGSAIT*SDKSPA
Trigger: GGCTGGAGATTTATCAGACCAAGTTATTGCACTACC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACAAAGCACGCAGTGTTaGTGCCATATAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVQSTQC*CHITSA
Trigger: AGCACTGGTTATATGGCACCAACACTGCGTGCTTTG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGAGAGATGATGGTGTaGACAATGGCCAAAGCACGC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTREMMV*TMAKAR
Trigger: GCGTGCTTTGGCCATTGTCCACACCATCATCTCTCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGAAAGAATAGATAATTaGCTAAGTTGTGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFERIDN*LSCALA
Trigger: TGCAAGAGCACAACTTAGCCAATTATCTATTCTTTC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCAGTCCTCAGGAACTaGATCTCATCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSVLRN*ISSSPP
Trigger: AGGAGGCGAGGATGAGATCCAGTTCCTGAGGACTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTCTTCTTCCGTTCCTaGTCCTGTCCTCCAGATTTT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKVFFRS*SCPPDF
Trigger: AAAATCTGGAGGACAGGACCAGGAACGGAAGAAGAC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTCTTCTTCCGTTCCTaGTCCTGTCCTCCAGATTTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVFFRS*SCPPDF
Trigger: AAAATCTGGAGGACAGGACCAGGAACGGAAGAAGAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTTCTTGTACTGTGGTaGACCTTCAGCAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLLVLW*TFSNSQ
Trigger: CTGGGAGTTGCTGAAGGTTCACCACAGTACAAGAAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGCACAGGTTGTCCATTaGTTCGGAAAGAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIAQVVH*FGKKCW
Trigger: CCAGCATTTCTTTCCGAATCAATGGACAACCTGTGC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCCACTAAAATTTCTTaGGGTGGTAACAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSTKIS*GGNSFT
Trigger: TGTGAAGCTGTTACCACCTCAAGAAATTTTAGTGGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTTGCCCAAACATTGTaGGCATTTTCTGCAAGCTTA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFAQTL*AFSASL
Trigger: TAAGCTTGCAGAAAATGCTCACAATGTTTGGGCAAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTTCCCCATTCAGTGTaGAGACCATGGAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVPHSV*RPWRHH
Trigger: ATGATGCCTCCATGGTCTTCACACTGAATGGGGAAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACCTCTATGTGGGGATaGTCCTTAGGCACATTCACA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITSMWG*SLGTFT
Trigger: TGTGAATGTGCCTAAGGATCATCCCCACATAGAGGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGACAGGGACTGTGACTaGAAGAGGAATGACATTCAA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVDRDCD*KRNDIQ
Trigger: TTGAATGTCATTCCTCTTTCAGTCACAGTCCCTGTC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTTCATCTCCCAGGGTaGCAGTCACAGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFHLPG*QSQCSF
Trigger: AAAACTGCACTGTGACTGTCACCCTGGGAGATGAAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATACATTGCTCCGACTTaGTCTTTGGGAACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTYIAPT*SLGTGY
Trigger: GTAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTCCTTCCCATTAGCTaGGAAGGACAACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFLPIS*EGQHAH
Trigger: ATGGGCATGTTGTCCTTCTCAGCTAATGGGAAGGAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCAGGGCTTTTGTCTTaGGAATCTGCAAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSGLLS*ESARES
Trigger: AGATTCCCTTGCAGATTCTCAAGACAAAAGCCCTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCAGGGCTTTTGTCTTaGGAATCTGCAAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSGLLS*ESARES
Trigger: AGATTCCCTTGCAGATTCTCAAGACAAAAGCCCTGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTAACAAGGTTCCAATaGGTTTCAGCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILTRFQ*VSAQAR
Trigger: TCGTGCCTGTGCTGAAACTCATTGGAACCTTGTTAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCAAACATGGCCTTCTaGTTTTGCCGGCTAATTCGA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSNMAF*FCRLIR
Trigger: TCGAATTAGCCGGCAAAATCAGAAGGCCATGTTTGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACTCCATCATCCTGTGTaGCTTCTGTCTTGTAACCCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLHHPV*LLSCNP
Trigger: AGGGTTACAAGACAGAAGTCACACAGGATGATGGAG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCCATCTGCATCCACTaGGACCTGCTTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSICIH*DLLLQC
Trigger: ACATTGGAGAAGCAGGTCTCAGTGGATGCAGATGGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTATTTCCATCCACTGTaGCTCTTGTCACAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKYFHPL*LLSQAH
Trigger: ATGGGCTTGTGACAAGAGTCACAGTGGATGGAAATA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTATTTCCATCCACTGTaGCTCTTGTCACAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSYFHPL*LLSQAH
Trigger: ATGGGCTTGTGACAAGAGTCACAGTGGATGGAAATA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCTCTGTTAATGTCTTaGAGGGCCGTATTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSLLMS*RAVLVG
Trigger: ACCCACTAATACGGCCCTTCAAGACATTAACAGAGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCTGAGAAACACCTTTaGTCTGCGTTCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSEKHL*SAFGNG
Trigger: CCCATTCCCGAACGCAGATCAAAGGTGTTTCTCAGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGCAAGATCACTTCAATaGCATGGGGCATCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIARSLQ*HGASQC
Trigger: ACACTGAGATGCCCCATGTCATTGAAGTGATCTTGC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCCCTCTTGAAGTTATaGGATTTACACCACAGAATG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSLLKL*DLHHRM
Trigger: CATTCTGTGGTGTAAATCTCATAACTTCAAGAGGGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTTGCTCTTCCCTCTTaGAGTTATGAGATTTACACC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFALPS*SYEIYT
Trigger: GGTGTAAATCTCATAACTTCAAGAGGGAAGAGCAAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCCGTTTCCGTTGCTTTaGCAACAATTTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSPFPLL*QQFVPY
Trigger: GTATGGCACAAATTGTTGTCAAAGCAACGGAAACGG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGTCCTCAGGAAGTTCTaGAAGTCACTGTTATGTCCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSVLRKF*KSLLCP
Trigger: AGGACATAACAGTGACTTTCAGAACTTCCTGAGGAC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTCCTCAGGAAGTTCTaGAAGTCACTGTTATGTCCT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKVLRKF*KSLLCP
Trigger: AGGACATAACAGTGACTTTCAGAACTTCCTGAGGAC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACCAATAGAAATCGCTaGTTGATTCCTGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVTNRNR*LIPADA
Trigger: TGCGTCTGCAGGAATCAATCAGCGATTTCTATTGGT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTATCACCACCATGTCCTaGAGGAGATCCAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFITTMS*RRSKSS
Trigger: GGAACTCTTGGATCTCCTTCAGGACATGGTGGTGAT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATAACACTGCCACATTaGACCCTATGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTITLPH*TLCPWL
Trigger: CAGCCAAGGACATAGGGTTCAATGTGGCAGTGTTAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCAGATTCTGAGATCTaGGATGCTAATTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSDSEI*DANCIS
Trigger: TGAGATGCAATTAGCATCTCAGATCTCAGAATCTGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGGAGAAGAACACCTTaGCCAGTTCCTTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRRRTP*PVPLHS
Trigger: TGAGTGCAAAGGAACTGGTCAAGGTGTTCTTCTCCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACAAAGAGGTCTGACATaGTGTCTGTATCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTQRGLT*CLYLLP
Trigger: AGGCAGGAGATACAGACATCATGTCAGACCTCTTTG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCAGATGGCTGTTCAGTaGTATAGAGGCCATCAAACT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSQMAVQ*YRGHQT
Trigger: AGTTTGATGGCCTCTATATCACTGAACAGCCATCTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGATCTCCATACTTGTTaGTCACCTTTCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKDLHTC*SPFSSQ
Trigger: TTGTGAAGAGAAAGGTGATCAACAAGTATGGAGATC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATTGTGAGTTACAGATaGCAGGATCGTCCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKIVSYR*QDRPQG
Trigger: ACCTTGAGGACGATCCTGTCATCTGTAACTCACAAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGTTTGTCTTCATGTTaGATCTCGTCCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTCLSSC*ISSSGG
Trigger: GCCACCAGAGGACGAGATGCAACATGAAGACAAACA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTTCTTTCCAGGCCATaGCACTCTCTTCCCTTACGA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFLSRP*HSLPLR
Trigger: TCGTAAGGGAAGAGAGTGGCATGGCCTGGAAAGAAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTAATTAGTCGTGTCTaGAGAAGCAGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLISRV*RSRFLR
Trigger: CCGGAGGAACCTGCTTCTGCAGACACGACTAATTAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAACTTAAATTCTCCATaGCGACCACCCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKNLNSP*RPPIRK
Trigger: CTTCCTGATGGGTGGTCGGCATGGAGAATTTAAGTT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTCCAAAATACCCACTaGCTTGATGCCAACGCTGAC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVQNTH*LDANAD
Trigger: GTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTCAATCTCATAGTCTaGGAAGGCAAGTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLNLIV*EGKFRT
Trigger: GGTTCTGAACTTGCCTTCGCAGACTATGAGATTGAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCTCAATCTCATAGTCTaGGAAGGCAAGTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLNLIV*EGKFRT
Trigger: GGTTCTGAACTTGCCTTCGCAGACTATGAGATTGAG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGAGGGCTGTCCATGGTaGCATCAATTCTCACAACCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFEGCPW*HQFSQP
Trigger: AGGTTGTGAGAATTGATGGCACCATGGACAGCCCTC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGATCATGTTGGCATTaGTGTTCTGTGTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTRSCWH*CSVCRR
Trigger: CCTTCGGCACACAGAACAGCAATGCCAACATGATCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCATGTAGCAGTTGCTaGGTTTCACACTTTCATGGA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPCSSC*VSHFHG
Trigger: TCCATGAAAGTGTGAAACGCAGCAACTGCTACATGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCCATGTAGCAGTTGCTaGGTTTCACACTTTCATGGA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSPCSSC*VSHFHG
Trigger: TCCATGAAAGTGTGAAACGCAGCAACTGCTACATGG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTGAGAAGGACAACATaGCCATTGCCAGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLRRTT*PLPDLE
Trigger: TTCTAGATCTGGCAATGGGCATGTTGTCCTTCTCAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGGCTGAAGGAAGACTaGAGGGAACACTTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTRLKED*REHFGV
Trigger: AACACCAAAGTGTTCCCTGCAGTCTTCCTTCAGCCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACACTGCCTTTTCCTCTaGGTGGGTCACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTHCLFL*VGHFFF
Trigger: GAAAAAGAAGTGACCCACGCAGAGGAAAAGGCAGTG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGCATTTTCAAAGAATaGTCGCAGCCCGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSIFKE*SQPGFH
Trigger: GTGAAAGCCGGGCTGCGAGCATTCTTTGAAAATGCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGAAACACCTTTGATCTaGGTTCGGGAATGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVETPLI*VREWVN
Trigger: GTTTACCCATTCCCGAACGCAGATCAAAGGTGTTTC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCAAGGGAGTAGAGGCTaGACAGAATGTGGTAGCATG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFQGSRG*TECGSM
Trigger: CATGCTACCACATTCTGTGCAGCCTCTACTCCCTTG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGTAGGACAGGTAGTTaGAGAGCATGGGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSRTGS*RAWARS
Trigger: TGATCTTGCCCATGCTCTGCAACTACCTGTCCTACT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTGACATCTTGCTTTTaGTGTCTCCAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: MILCSSAHQSLARVLLHDLTSCF*CLQLKM
Trigger: CATTTTTAACTGGAGACAGCAAAAGCAAGATGTCAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAAAGGCTGTTCCACCTaGTCAAGGTGGAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFKGCST*SRWKRA
Trigger: AGCTCTCTTCCACCTTGAGCAGGTGGAACAGCCTTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACTGCCCGTTTCCGTTaGTTTGACAACAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVTARFR*FDNNLC
Trigger: GCACAAATTGTTGTCAAAGCAACGGAAACGGGCAGT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGCTCTTGGCCATCATaGTGGAATAGGAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSSWPS*WNRKCT
Trigger: TGTACACTTCCTATTCCAGCATGATGGCCAAGAGCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACGCTCGTGCAGCCTTaGTTGTTGATACAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVTLVQP*LLIQCF
Trigger: AAAACACTGTATCAACAAGCAAGGCTGCACGAGCGT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACGCTCGTGCAGCCTTaGTTGTTGATACAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTLVQP*LLIQCF
Trigger: AAAACACTGTATCAACAAGCAAGGCTGCACGAGCGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGGCTCATCTCACCTTTaGTGGCACTTATCATCTGAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSGSSHL*WHLSSE
Trigger: TTCAGATGATAAGTGCCAGCAAAGGTGAGATGAGCC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGGCTCAGTCACTTCTaGCCTGTCAGTTTCTATTAC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSWLSHF*PVSFYY
Trigger: GTAATAGAAACTGACAGGGCAGAAGTGACTGAGCCA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCCACTTCAGGCCCTTaGTTTAAGCCACCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPTSGP*FKPPSF
Trigger: GAAAGAAGGTGGCTTAAAGCAAGGGCCTGAAGTGGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACATCTCTGCTGCCTGTaGTTTTCTTTTCTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTHLCCL*FSFLPH
Trigger: GTGCGGAAGAAAAGAAAAGCACAGGCAGCAGAGATG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACTTTACTGTCACGTCTaGCCACAGGTAGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLYCHV*PQVVCL
Trigger: CAAACAGACTACCTGTGGGCAGACGTGACAGTAAAG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTCAGCGATGCGCTCTaGTCCATAGAGATCTCCATA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFSDAL*SIEISI
Trigger: TATGGAGATCTCTATGGAGCAGAGCGCATCGCTGAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGCAGACACAGAGATCTaGAGGAATGTACTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTADTEI*RNVLGF
Trigger: GAAGCCAAGTACATTCCTCCAGATCTCTGTGTCTGC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCTGGGATCTTGACGTaGTCAAGCACGTTAGATACA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSGILT*SSTLDT
Trigger: TGTATCTAACGTGCTTGACCACGTCAAGATCCCAGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCTGGGATCTTGACGTaGTCAAGCACGTTAGATACA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSGILT*SSTLDT
Trigger: TGTATCTAACGTGCTTGACCACGTCAAGATCCCAGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGAAGGAGAAGGCTGTaGATTTGGTGTCGGATTTTC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGRRRL*IWCRIF
Trigger: GAAAATCCGACACCAAATCCACAGCCTTCTCCTTCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGAAGGAGAAGGCTGTaGATTTGGTGTCGGATTTTC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGRRRL*IWCRIF
Trigger: GAAAATCCGACACCAAATCCACAGCCTTCTCCTTCC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACCCGTACTTGATTTCTaGAACTCCCATGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTPVLDF*NSHAFH
Trigger: ATGGAAGGCATGGGAGTTCCAGAAATCAAGTACGGG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCACAGATCAGATTCTaGTTGGCTCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSQIRF*LALTAT
Trigger: GGTTGCAGTAAGAGCCAACCAGAATCTGATCTGTGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCACAGATCAGATTCTaGTTGGCTCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSQIRF*LALTAT
Trigger: GGTTGCAGTAAGAGCCAACCAGAATCTGATCTGTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGACTTGAGCAGATGCTaGTTGATGGAAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFDLSRC*LMEATA
Trigger: AGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGGAGAGGAACTGTGTaGTACCCAATAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGRGTV*YPIDLS
Trigger: TGAGAGATCTATTGGGTACCACACAGTTCCTCTCCC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGGAGAGGAACTGTGTaGTACCCAATAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGRGTV*YPIDLS
Trigger: TGAGAGATCTATTGGGTACCACACAGTTCCTCTCCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGTATCTATGGGACATaGGATGAAAGAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGIYGT*DERGLG
Trigger: TCCCAAGCCTCTTTCATCCCATGTCCCATAGATACC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGCAAAACAACCTGACTaGTATCTATGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSAKQPD*YLWDMG
Trigger: TCCCATGTCCCATAGATACCAGTCAGGTTGTTTTGC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGCAAAACAACCTGACTaGTATCTATGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKAKQPD*YLWDMG
Trigger: TCCCATGTCCCATAGATACCAGTCAGGTTGTTTTGC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGCAAAACAACCTGACTaGTATCTATGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVAKQPD*YLWDMG
Trigger: TCCCATGTCCCATAGATACCAGTCAGGTTGTTTTGC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCACATTCACAAATGTTaGGAGGCGCTTGCTAAACCA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSHIHKC*EALAKP
Trigger: TGGTTTAGCAAGCGCCTCCCAACATTTGTGAATGTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACACATTCACAAATGTTaGGAGGCGCTTGCTAAACCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVHIHKC*EALAKP
Trigger: TGGTTTAGCAAGCGCCTCCCAACATTTGTGAATGTG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATGGAGGGCTGTCCATaGTGCCATCAATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTMEGCP*CHQFSQ
Trigger: TTGTGAGAATTGATGGCACCATGGACAGCCCTCCAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTGATCTTTGGGAACTaGCTACAATATCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILIFGN*LQYPHP
Trigger: GGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTAGCATTGGCCAGGTaGATGCTAATGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLALAR*MLMSRS
Trigger: TGACCTGCTCATTAGCATCCACCTGGCCAATGCTAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGATTTGCCTGCAGCTTaGACACGTAAATGTCACCAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSDLPAA*TRKCHQ
Trigger: TTGGTGACATTTACGTGTCCAAGCTGCAGGCAAATC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGATTTGCCTGCAGCTTaGACACGTAAATGTCACCAA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVDLPAA*TRKCHQ
Trigger: TTGGTGACATTTACGTGTCCAAGCTGCAGGCAAATC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACTCTCTTGTCTTTCTaGCAGTTAGGGCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITLLSF*QLGLQT
Trigger: TGTCTGCAGCCCTAACTGCCAGAAAGACAAGAGAGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACCAGAAGGTCCTCATaGAAGTCATACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITRRSS*KSYSSS
Trigger: AGAGGAGCTGTATGACTTCCATGAGGACCTTCTGGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGCTAGCAACCATCTTTaGGAAGGCAATCTGCGACTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIASNHL*EGNLRL
Trigger: AAGTCGCAGATTGCCTTCCCAAAGATGGTTGCTAGC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGCTAGCAACCATCTTTaGGAAGGCAATCTGCGACTT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTASNHL*EGNLRL
Trigger: AAGTCGCAGATTGCCTTCCCAAAGATGGTTGCTAGC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAACTATTGCCCTGATTaGTCTGGGACACACATCGAA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVNYCPD*SGTHIE
Trigger: TTCGATGTGTGTCCCAGACCAATCAGGGCAATAGTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAACTATTGCCCTGATTaGTCTGGGACACACATCGAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSNYCPD*SGTHIE
Trigger: TTCGATGTGTGTCCCAGACCAATCAGGGCAATAGTT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGTCAAGGTGTCATATaGTACCAAAAGCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSQGVI*YQKRVA
Trigger: AGCCACCCGCTTTTGGTACCATATGACACCTTGACT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTACTGGTCGACCAGTaGGAGGAGAACTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVLVDQ*EENFGK
Trigger: TTTGCCAAAGTTCTCCTCCCACTGGTCGACCAGTAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGCTTGCAGAATAGGCTaGCCACCATTTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSACRIG*PPFLSL
Trigger: AAGAGAAAGAAATGGTGGCCAGCCTATTCTGCAAGC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGCTTGCAGAATAGGCTaGCCACCATTTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVACRIG*PPFLSL
Trigger: AAGAGAAAGAAATGGTGGCCAGCCTATTCTGCAAGC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATCACTTCAATGACATaGGGCATCTCAGTGTACCGG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIITSMT*GISVYR
Trigger: CCGGTACACTGAGATGCCCCATGTCATTGAAGTGAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGCTTTGCTGATAATTaGCTGGGCATACACTGCGAT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGFADN*LGIHCD
Trigger: ATCGCAGTGTATGCCCAGCCAATTATCAGCAAAGCC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTCAGAATCAGGATCTaGGCTTTTGAGCCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVRIRI*AFEPVR
Trigger: TCTAACTGGCTCAAAAGCCCAGATCCTGATTCTGAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACGATAAGGGACGTCTaGATGGAATACAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTIRDV*MEYKSP
Trigger: AGGAGACTTGTATTCCATCCAGACGTCCCTTATCGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTGCCATTTCACAGCTaGGTCATCAGACTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILPFHS*VIRLLL
Trigger: CAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAATGATCTGGTGAAGTaGGTCAGGTTGCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKINDLVK*VRLPLC
Trigger: ACAGAGAGGCAACCTGACCCACTTCACCAGATCATT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGCAGCTCGATCTGACTaGAATCCTGAGAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTAARSD*NPEKAS
Trigger: TGAAGCTTTCTCAGGATTCCAGTCAGATCGAGCTGC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCCTTGGCTGGCTCATaGAACCTCTCTACAAAATCC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSLAGS*NLSTKS
Trigger: GGATTTTGTAGAGAGGTTCCATGAGCCAGCCAAGGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGCCACCTTCTTTCTTaGAGTGGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSHLLS*SGFQRG
Trigger: ACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTTGGCCTCTTCTACTaGGCTAAAGTCAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFGLFY*AKVKGI
Trigger: AATGCCCTTGACTTTAGCCCAGTAGAAGAGGCCAAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTTGGCCTCTTCTACTaGGCTAAAGTCAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFGLFY*AKVKGI
Trigger: AATGCCCTTGACTTTAGCCCAGTAGAAGAGGCCAAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGTACTTCATGTCGATaGAACTTAGCCATGACACCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGTSCR*NLAMTP
Trigger: TGGTGTCATGGCTAAGTTCCATCGACATGAAGTACC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGTACTTCATGTCGATaGAACTTAGCCATGACACCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGTSCR*NLAMTP
Trigger: TGGTGTCATGGCTAAGTTCCATCGACATGAAGTACC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTCTTCTTCCGTTCCTaGTCCTGTCCTCCAGATTTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVFFRS*SCPPDF
Trigger: AAAATCTGGAGGACAGGACCAGGAACGGAAGAAGAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTTGATATCGAGAGATaGAGATATCTTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFDIER*RYLSED
Trigger: GTCCTCTGAAAGATATCTTCATCTCTCGATATCAAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTCAATGCTACTTCCTaGGCAGGTAGGATGTACGTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFNATS*AGRMYV
Trigger: AACGTACATCCTACCTGCTCAGGAAGTAGCATTGAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTCAAACATTCATCATaGCCGTGGAAAAGACGAACT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVKHSS*PWKRRT
Trigger: AGTTCGTCTTTTCCACGGTCATGATGAATGTTTGAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAATCTAATTTCTCCTTaGTTTCCTTTGATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSNLISP*FPLMLG
Trigger: TCCGAGCATCAAAGGAAATCAAGGAGAAATTAGATT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCCATATCTCTTTTGTaGCTGGAATCTAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSISLL*LESNFS
Trigger: GGAGAAATTAGATTCCAGTCACAAAAGAGATATGGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGCACAGGTTGTCCATTaGTTCGGAAAGAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFAQVVH*FGKKCW
Trigger: CCAGCATTTCTTTCCGAATCAATGGACAACCTGTGC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACATGGTATAAAACTTaGAGGTACTGGCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTWYKT*RYWHLS
Trigger: GGACAGATGCCAGTACCTTCAAGTTTTATACCATGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGACAGGGACTGTGACTaGAAGAGGAATGACATTCAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIDRDCD*KRNDIQ
Trigger: TTGAATGTCATTCCTCTTTCAGTCACAGTCCCTGTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTTCATCTCCCAGGGTaGCAGTCACAGTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFHLPG*QSQCSF
Trigger: AAAACTGCACTGTGACTGTCACCCTGGGAGATGAAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTCCTTCCCATTAGCTaGGAAGGACAACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFLPIS*EGQHAH
Trigger: ATGGGCATGTTGTCCTTCTCAGCTAATGGGAAGGAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTTCCAAGTTCAAACTaGAACAAGGACGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFPSSN*NKDVLV
Trigger: TACCAGCACGTCCTTGTTTCAGTTTGAACTTGGAAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTTCCAAGTTCAAACTaGAACAAGGACGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFPSSN*NKDVLV
Trigger: TACCAGCACGTCCTTGTTTCAGTTTGAACTTGGAAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTAACAAGGTTCCAATaGGTTTCAGCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLTRFQ*VSAQAR
Trigger: TCGTGCCTGTGCTGAAACTCATTGGAACCTTGTTAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACAAGCCCATTTATCATaGGAATGCTCAGCATACTTG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVQAHLS*ECSAYL
Trigger: CAAGTATGCTGAGCATTCTCATGATAAATGGGCTTG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATATTTCCATCCACTGTaGCTCTTGTCACAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTYFHPL*LLSQAH
Trigger: ATGGGCTTGTGACAAGAGTCACAGTGGATGGAAATA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATCGCTCCCAAAGAGTaGAATCCTGTGTCTAACAAG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTIAPKE*NPVSNK
Trigger: CTTGTTAGACACAGGATTTCACTCTTTGGGAGCGAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACCGTTTCCGTTGCTTTaGCAACAATTTGTGCCATAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTPFPLL*QQFVPY
Trigger: GTATGGCACAAATTGTTGTCAAAGCAACGGAAACGG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGACCAGAGAGGCTTTaGAAGAATCCAGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSRPERL*KNPASF
Trigger: AAAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGACCAGAGAGGCTTTaGAAGAATCCAGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRPERL*KNPASF
Trigger: AAAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTCCTCAGGAAGTTCTaGAAGTCACTGTTATGTCCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVLRKF*KSLLCP
Trigger: AGGACATAACAGTGACTTTCAGAACTTCCTGAGGAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACCAATAGAAATCGCTaGTTGATTCCTGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITNRNR*LIPADA
Trigger: TGCGTCTGCAGGAATCAATCAGCGATTTCTATTGGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATTGTGAGTTACAGATaGCAGGATCGTCCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTIVSYR*QDRPQG
Trigger: ACCTTGAGGACGATCCTGTCATCTGTAACTCACAAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATTGTGAGTTACAGATaGCAGGATCGTCCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIIVSYR*QDRPQG
Trigger: ACCTTGAGGACGATCCTGTCATCTGTAACTCACAAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCCAGCCAAACACGTTaGAAGGTGATCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISSQTR*KVIRKK
Trigger: TTTCTTCCTGATCACCTTTCAACGTGTTTGGCTGGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134358.9
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTCCTTGTGAATGTTTaGAATGCACTGGAGTACAAC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLLVNV*NALEYN
Trigger: GTTGTACTCCAGTGCATTGCAAACATTCACAAGGAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTTCCAGCACGAAATTaGAGACACAGAGATCTGGAG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVPARN*RHRDLE
Trigger: CTCCAGATCTCTGTGTCTGCAATTTCGTGCTGGAAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTGGCAAGCATTTCTTaGAGTGCTCTGACAGATAAG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLASIS*SALTDK
Trigger: CTTATCTGTCAGAGCACTGCAAGAAATGCTTGCCAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTGGCAAGCATTTCTTaGAGTGCTCTGACAGATAAG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLASIS*SALTDK
Trigger: CTTATCTGTCAGAGCACTGCAAGAAATGCTTGCCAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGGCATCCACTTGGATaGTACCATTTGATATCGAGA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRHPLG*YHLISR
Trigger: TCTCGATATCAAATGGTAGCATCCAAGTGGATGCCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGGCATCCACTTGGATaGTACCATTTGATATCGAGA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSRHPLG*YHLISR
Trigger: TCTCGATATCAAATGGTAGCATCCAAGTGGATGCCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTGTTTGTCTTCATGTTaGATCTCGTCCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFCLSSC*ISSSGG
Trigger: GCCACCAGAGGACGAGATGCAACATGAAGACAAACA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATGTTTAATCGATCAATaGAATTCAATACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKCLIDQ*NSIRGP
Trigger: TGGCCCTCGTATTGAATTGCATTGATCGATTAAACA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTCCCTTACGATCCCTaGAAAGTGTGCTACACTATT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFPYDP*KVCYTI
Trigger: AATAGTGTAGCACACTTTGCAGGGATCGTAAGGGAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTCCCTTACGATCCCTaGAAAGTGTGCTACACTATT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFPYDP*KVCYTI
Trigger: AATAGTGTAGCACACTTTGCAGGGATCGTAAGGGAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTCCCTTACGATCCCTaGAAAGTGTGCTACACTATT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFPYDP*KVCYTI
Trigger: AATAGTGTAGCACACTTTGCAGGGATCGTAAGGGAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAACTTAAATTCTCCATaGCGACCACCCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKINLNSP*RPPIRK
Trigger: CTTCCTGATGGGTGGTCGGCATGGAGAATTTAAGTT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCACTGCCTTTTCCTCTaGGTGGGTCACTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFHCLFL*VGHFFF
Trigger: GAAAAAGAAGTGACCCACGCAGAGGAAAAGGCAGTG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGAAACACCTTTGATCTaGGTTCGGGAATGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTETPLI*VREWVN
Trigger: GTTTACCCATTCCCGAACGCAGATCAAAGGTGTTTC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGAAACACCTTTGATCTaGGTTCGGGAATGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIETPLI*VREWVN
Trigger: GTTTACCCATTCCCGAACGCAGATCAAAGGTGTTTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACCTCCAGACTTTACTTaGATGGCTTTTGACATCTTG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVPPDFT*MAFDIL
Trigger: CAAGATGTCAAAAGCCATGCAAGTAAAGTCTGGAGG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCCTCCAGACTTTACTTaGATGGCTTTTGACATCTTG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSPPDFT*MAFDIL
Trigger: CAAGATGTCAAAAGCCATGCAAGTAAAGTCTGGAGG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTTGACAACAATTTGTaGCATACAGCCTTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSFDNNL*HTAFLD
Trigger: GTCCAAAAAGGCTGTATGGCACAAATTGTTGTCAAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAACTGCCCGTTTCCGTTaGTTTGACAACAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTTARFR*FDNNLC
Trigger: GCACAAATTGTTGTCAAAGCAACGGAAACGGGCAGT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACGCTCGTGCAGCCTTaGTTGTTGATACAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITLVQP*LLIQCF
Trigger: AAAACACTGTATCAACAAGCAAGGCTGCACGAGCGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGCTCATCTCACCTTTaGTGGCACTTATCATCTGAA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGSSHL*WHLSSE
Trigger: TTCAGATGATAAGTGCCAGCAAAGGTGAGATGAGCC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAATTTGCTTGGTGACTaGCAGAGCTTTAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSNLLGD*QSFREI
Trigger: AATTTCTCTAAAGCTCTGGCAGTCACCAAGCAAATT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGGCTCAGTCACTTCTaGCCTGTCAGTTTCTATTAC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTWLSHF*PVSFYY
Trigger: GTAATAGAAACTGACAGGGCAGAAGTGACTGAGCCA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTGCCATATAACCAGTaGTCTCCTGAAGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKVPYNQ*SPEEQR
Trigger: TCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCAC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTCAGCGATGCGCTCTaGTCCATAGAGATCTCCATA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFSDAL*SIEISI
Trigger: TATGGAGATCTCTATGGAGCAGAGCGCATCGCTGAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCAGAACCAGCTGTTTaGCATTGTGAGTTACAGATG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSEPAV*HCELQM
Trigger: CATCTGTAACTCACAATGGCAAACAGCTGGTTCTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCAGAACCAGCTGTTTaGCATTGTGAGTTACAGATG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSEPAV*HCELQM
Trigger: CATCTGTAACTCACAATGGCAAACAGCTGGTTCTGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCTGGGATCTTGACGTaGTCAAGCACGTTAGATACA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISGILT*SSTLDT
Trigger: TGTATCTAACGTGCTTGACCACGTCAAGATCCCAGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCCGTACTTGATTTCTaGAACTCCCATGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPVLDF*NSHAFH
Trigger: ATGGAAGGCATGGGAGTTCCAGAAATCAAGTACGGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTTCCACTGACAAACTaGCTGAATAAGGCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFPLTN*LNKAVV
Trigger: CACAACCGCCTTATTCAGCCAGTTTGTCAGTGGAAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGTATCTATGGGACATaGGATGAAAGAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGIYGT*DERGLG
Trigger: TCCCAAGCCTCTTTCATCCCATGTCCCATAGATACC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACTGGCTTATAGCCATTaGACATCATATAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKLAYSH*TSYSFW
Trigger: CCAAAAACTATATGATGTCCAATGGCTATAAGCCAG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACCCTGTTTGATTTCTTaGTGCGCTCATCTAGTAATG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVPCLIS*CAHLVM
Trigger: CATTACTAGATGAGCGCACCAAGAAATCAAACAGGG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGATCAGCTAGTTCTTaGTCTGAAGGCTCAATGTTA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGSASS*SEGSML
Trigger: TAACATTGAGCCTTCAGACCAAGAACTAGCTGATCC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTATGGAGGGCTGTCCATaGTGCCATCAATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFMEGCP*CHQFSQ
Trigger: TTGTGAGAATTGATGGCACCATGGACAGCCCTCCAT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACTCCGACTTGATCTTTaGGAACTGGCTACAATATCC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLRLDL*ELATIS
Trigger: GGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTCCGACTTGATCTTTaGGAACTGGCTACAATATCC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILRLDL*ELATIS
Trigger: GGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGTACTTGTTGTCAATaGCGTAGAAGAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSTCCQ*RRRAVR
Trigger: TCTCACAGCTCTTCTACGCCATTGACAACAAGTACT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGTACTTGTTGTCAATaGCGTAGAAGAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSTCCQ*RRRAVR
Trigger: TCTCACAGCTCTTCTACGCCATTGACAACAAGTACT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGATTTGCCTGCAGCTTaGACACGTAAATGTCACCAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIDLPAA*TRKCHQ
Trigger: TTGGTGACATTTACGTGTCCAAGCTGCAGGCAAATC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGAGTTGCTGTAACATaGAAGGTCTCAAATGATTGC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGVAVT*KVSNDC
Trigger: GCAATCATTTGAGACCTTCCATGTTACAGCAACTCC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTTTCAGGGACTCTCTaGCAGGCCAGCGATAAATTT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFSGTL*QASDKF
Trigger: AAATTTATCGCTGGCCTGCCAGAGAGTCCCTGAAAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTTTCAGGGACTCTCTaGCAGGCCAGCGATAAATTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFSGTL*QASDKF
Trigger: AAATTTATCGCTGGCCTGCCAGAGAGTCCCTGAAAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCAGCTTCTTCTTCTTaGCCCAGATATTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPASSS*PRYCDS
Trigger: ACTATCACAATATCTGGGCCAAGAAGAAGAAGCTGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGAATGCCATTCACTTaGAGGAATTTGAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRMPFT*RNLNRS
Trigger: GGACCTGTTCAAATTCCTCCAAGTGAATGGCATTCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGAATGCCATTCACTTaGAGGAATTTGAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSRMPFT*RNLNRS
Trigger: GGACCTGTTCAAATTCCTCCAAGTGAATGGCATTCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGAATGCCATTCACTTaGAGGAATTTGAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRMPFT*RNLNRS
Trigger: GGACCTGTTCAAATTCCTCCAAGTGAATGGCATTCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGCTTGCAGAATAGGCTaGCCACCATTTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIACRIG*PPFLSL
Trigger: AAGAGAAAGAAATGGTGGCCAGCCTATTCTGCAAGC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTCAGAATCAGGATCTaGGCTTTTGAGCCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVRIRI*AFEPVR
Trigger: TCTAACTGGCTCAAAAGCCCAGATCCTGATTCTGAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAACGATAAGGGACGTCTaGATGGAATACAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTTIRDV*MEYKSP
Trigger: AGGAGACTTGTATTCCATCCAGACGTCCCTTATCGT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAATGATCTGGTGAAGTaGGTCAGGTTGCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFNDLVK*VRLPLC
Trigger: ACAGAGAGGCAACCTGACCCACTTCACCAGATCATT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCTTGGCCATCATGCTaGAATAGGAAGTGTACAATG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSWPSC*NRKCTM
Trigger: CATTGTACACTTCCTATTCCAGCATGATGGCCAAGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCATCTCACCTTTGCTaGCACTTATCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSSHLC*HLSSEG
Trigger: TCCTTCAGATGATAAGTGCCAGCAAAGGTGAGATGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATGTTAGCAAATACATaGAGGAACCCGACTACTGCA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSMLANT*RNPTTA
Trigger: TGCAGTAGTCGGGTTCCTCCATGTATTTGCTAACAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCACCCTTTACAAAGTaGACCAGCTCAGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSPFTK*TSSVVT
Trigger: TGTCACCACTGAGCTGGTCCACTTTGTAAAGGGTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCAAAGCACGCAGTGTTaGTGCCATATAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFQSTQC*CHITSA
Trigger: AGCACTGGTTATATGGCACCAACACTGCGTGCTTTG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGATGTCATCCTCAGATaGCTGTTCAGTGATATAGAG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKDVILR*LFSDIE
Trigger: CTCTATATCACTGAACAGCCATCTGAGGATGACATC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGATGTCATCCTCAGATaGCTGTTCAGTGATATAGAG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSDVILR*LFSDIE
Trigger: CTCTATATCACTGAACAGCCATCTGAGGATGACATC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGATGTCATCCTCAGATaGCTGTTCAGTGATATAGAG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVDVILR*LFSDIE
Trigger: CTCTATATCACTGAACAGCCATCTGAGGATGACATC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTTGGCCTCTTCTACTaGGCTAAAGTCAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFGLFY*AKVKGI
Trigger: AATGCCCTTGACTTTAGCCCAGTAGAAGAGGCCAAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGTACTTCATGTCGATaGAACTTAGCCATGACACCA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGTSCR*NLAMTP
Trigger: TGGTGTCATGGCTAAGTTCCATCGACATGAAGTACC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTCAATGCTACTTCCTaGGCAGGTAGGATGTACGTT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFNATS*AGRMYV
Trigger: AACGTACATCCTACCTGCTCAGGAAGTAGCATTGAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTCAAACATTCATCATaGCCGTGGAAAAGACGAACT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVKHSS*PWKRRT
Trigger: AGTTCGTCTTTTCCACGGTCATGATGAATGTTTGAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTACTTTGACACCAGCTaGAAAACTCATCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIYFDTS*KTHHRE
Trigger: TTCCCTGTGATGAGTTTTTCAGCTGGTGTCAAAGTA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCACGCTTATATTCTTTaGCAGGCTCCAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIHAYIL*QAPISS
Trigger: AGATGAGATTGGAGCCTGTCAAAGAATATAAGCGTG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCCACTAAAATTTCTTaGGGTGGTAACAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSTKIS*GGNSFT
Trigger: TGTGAAGCTGTTACCACCTCAAGAAATTTTAGTGGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTTGCCCAAACATTGTaGGCATTTTCTGCAAGCTTA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFAQTL*AFSASL
Trigger: TAAGCTTGCAGAAAATGCTCACAATGTTTGGGCAAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGACAGGGACTGTGACTaGAAGAGGAATGACATTCAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFDRDCD*KRNDIQ
Trigger: TTGAATGTCATTCCTCTTTCAGTCACAGTCCCTGTC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTTCCAAGTTCAAACTaGAACAAGGACGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFPSSN*NKDVLV
Trigger: TACCAGCACGTCCTTGTTTCAGTTTGAACTTGGAAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTTCCAAGTTCAAACTaGAACAAGGACGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFPSSN*NKDVLV
Trigger: TACCAGCACGTCCTTGTTTCAGTTTGAACTTGGAAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCAGGGCTTTTGTCTTaGGAATCTGCAAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSGLLS*ESARES
Trigger: AGATTCCCTTGCAGATTCTCAAGACAAAAGCCCTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCAAACATGGCCTTCTaGTTTTGCCGGCTAATTCGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSNMAF*FCRLIR
Trigger: TCGAATTAGCCGGCAAAATCAGAAGGCCATGTTTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCTCTGTTAATGTCTTaGAGGGCCGTATTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSLLMS*RAVLVG
Trigger: ACCCACTAATACGGCCCTTCAAGACATTAACAGAGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCCCTCTTGAAGTTATaGGATTTACACCACAGAATG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSLLKL*DLHHRM
Trigger: CATTCTGTGGTGTAAATCTCATAACTTCAAGAGGGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTTGCTCTTCCCTCTTaGAGTTATGAGATTTACACC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFALPS*SYEIYT
Trigger: GGTGTAAATCTCATAACTTCAAGAGGGAAGAGCAAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGACCAGAGAGGCTTTaGAAGAATCCAGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRPERL*KNPASF
Trigger: AAAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACCAATAGAAATCGCTaGTTGATTCCTGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTNRNR*LIPADA
Trigger: TGCGTCTGCAGGAATCAATCAGCGATTTCTATTGGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTCGACTGGATTCACTaGTCTCAAAATAAACACGCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFDWIH*SQNKHA
Trigger: AGCGTGTTTATTTTGAGATCAGTGAATCCAGTCGAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCAGATTCTGAGATCTaGGATGCTAATTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSDSEI*DANCIS
Trigger: TGAGATGCAATTAGCATCTCAGATCTCAGAATCTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCAGATTCTGAGATCTaGGATGCTAATTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSDSEI*DANCIS
Trigger: TGAGATGCAATTAGCATCTCAGATCTCAGAATCTGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGATTCCAAAGAGGTCTaGCATGATGTCTGTATCTCC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFDSKEV*HDVCIS
Trigger: GGAGATACAGACATCATGTCAGACCTCTTTGGAATC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCAGATGGCTGTTCAGTaGTATAGAGGCCATCAAACT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFQMAVQ*YRGHQT
Trigger: AGTTTGATGGCCTCTATATCACTGAACAGCCATCTG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGATCTCCATACTTGTTaGTCACCTTTCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKDLHTC*SPFSSQ
Trigger: TTGTGAAGAGAAAGGTGATCAACAAGTATGGAGATC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGATCTCCATACTTGTTaGTCACCTTTCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSDLHTC*SPFSSQ
Trigger: TTGTGAAGAGAAAGGTGATCAACAAGTATGGAGATC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCAATAATAAGACCTTaGATGATGGCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSIIRP*MMASKM
Trigger: CATCTTGCTGGCCATCATTCAAGGTCTTATTATTGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCAATAATAAGACCTTaGATGATGGCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSIIRP*MMASKM
Trigger: CATCTTGCTGGCCATCATTCAAGGTCTTATTATTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCAATAATAAGACCTTaGATGATGGCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSIIRP*MMASKM
Trigger: CATCTTGCTGGCCATCATTCAAGGTCTTATTATTGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGGCATCCACTTGGATaGTACCATTTGATATCGAGA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTRHPLG*YHLISR
Trigger: TCTCGATATCAAATGGTAGCATCCAAGTGGATGCCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGATCCCTGCAAAGTGTaGTACACTATTGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSDPCKV*YTIVDV
Trigger: AACATCTACAATAGTGTAGCACACTTTGCAGGGATC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTCCCTTACGATCCCTaGAAAGTGTGCTACACTATT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFPYDP*KVCYTI
Trigger: AATAGTGTAGCACACTTTGCAGGGATCGTAAGGGAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAACTTAAATTCTCCATaGCGACCACCCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFNLNSP*RPPIRK
Trigger: CTTCCTGATGGGTGGTCGGCATGGAGAATTTAAGTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTTAATTCTGTCCTTTaGCCAAACATTGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFNSVL*PNIVSI
Trigger: AATGCTCACAATGTTTGGGCAAAGGACAGAATTAAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTTAATTCTGTCCTTTaGCCAAACATTGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSFNSVL*PNIVSI
Trigger: AATGCTCACAATGTTTGGGCAAAGGACAGAATTAAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAAGGTCTCAAATGATTaGAAATGGCTAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSKVSND*KWLANI
Trigger: AATGTTTGCTAGCCATTTGCAATCATTTGAGACCTT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGAAACACCTTTGATCTaGGTTCGGGAATGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFETPLI*VREWVN
Trigger: GTTTACCCATTCCCGAACGCAGATCAAAGGTGTTTC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTGACATCTTGCTTTTaGTGTCTCCAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKLTSCF*CLQLKM
Trigger: CATTTTTAACTGGAGACAGCAAAAGCAAGATGTCAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGCTCTTGGCCATCATaGTGGAATAGGAAGTGTACA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSSWPS*WNRKCT
Trigger: TGTACACTTCCTATTCCAGCATGATGGCCAAGAGCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGCTTTAGAGAAATTATaGTGTCCAGATTCATCAATG +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSALEKL*CPDSSM
Trigger: CATTGATGAATCTGGACAGCATAATTTCTCTAAAGC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTGCCATATAACCAGTaGTCTCCTGAAGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVPYNQ*SPEEQR
Trigger: TCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGTCTTAAAGCCCATTaGAATATCCAACAGATGAGC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGLKAH*NIQQMS
Trigger: GCTCATCTGTTGGATATTGCAATGGGCTTTAAGACC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAAGGAGGCATCCACTTaGATGCTACCATTTGATATC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTKEAST*MLPFDI
Trigger: GATATCAAATGGTAGCATCCAAGTGGATGCCTCCTT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTTCCACTGACAAACTaGCTGAATAAGGCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFPLTN*LNKAVV
Trigger: CACAACCGCCTTATTCAGCCAGTTTGTCAGTGGAAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTACCAATCAAGGTTATTaGAGAATTGAGCACAATTGT +
Preference number: 4 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSTNQGY*RIEHNC
Trigger: ACAATTGTGCTCAATTCTCCAATAACCTTGATTGGT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCACAGATCAGATTCTaGTTGGCTCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSQIRF*LALTAT
Trigger: GGTTGCAGTAAGAGCCAACCAGAATCTGATCTGTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGCAAAACAACCTGACTaGTATCTATGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFAKQPD*YLWDMG
Trigger: TCCCATGTCCCATAGATACCAGTCAGGTTGTTTTGC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGATCAGCTAGTTCTTaGTCTGAAGGCTCAATGTTA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGSASS*SEGSML
Trigger: TAACATTGAGCCTTCAGACCAAGAACTAGCTGATCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTCCGACTTGATCTTTaGGAACTGGCTACAATATCC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLRLDL*ELATIS
Trigger: GGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAACTATTGCCCTGATTaGTCTGGGACACACATCGAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFNYCPD*SGTHIE
Trigger: TTCGATGTGTGTCCCAGACCAATCAGGGCAATAGTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCCAGCTTCTTCTTCTTaGCCCAGATATTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIPASSS*PRYCDS
Trigger: ACTATCACAATATCTGGGCCAAGAAGAAGAAGCTGG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAAGAATTTGATCTCCTaGTCATGGGGAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKKNLIS*SWGDFS
Trigger: AGAAAAGTCTCCCCATGACCAGGAGATCAAATTCTT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAATTTGATCTCCTaGTCATGGGGAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSKNLIS*SWGDFS
Trigger: AGAAAAGTCTCCCCATGACCAGGAGATCAAATTCTT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTCAGAATCAGGATCTaGGCTTTTGAGCCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVRIRI*AFEPVR
Trigger: TCTAACTGGCTCAAAAGCCCAGATCCTGATTCTGAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACGATAAGGGACGTCTaGATGGAATACAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTIRDV*MEYKSP
Trigger: AGGAGACTTGTATTCCATCCAGACGTCCCTTATCGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCTTGGCCATCATGCTaGAATAGGAAGTGTACAATG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISWPSC*NRKCTM
Trigger: CATTGTACACTTCCTATTCCAGCATGATGGCCAAGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCATCTCACCTTTGCTaGCACTTATCATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSSHLC*HLSSEG
Trigger: TCCTTCAGATGATAAGTGCCAGCAAAGGTGAGATGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATGTTAGCAAATACATaGAGGAACCCGACTACTGCA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTMLANT*RNPTTA
Trigger: TGCAGTAGTCGGGTTCCTCCATGTATTTGCTAACAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGCCACCTTCTTTCTTaGAGTGGATTCCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSHLLS*SGFQRG
Trigger: ACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGTAGTGCAATAACTTaGTCTGATAAATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGSAIT*SDKSPA
Trigger: GGCTGGAGATTTATCAGACCAAGTTATTGCACTACC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCTAGCTTCCAAATATaGTACTTCATGTCGATGGAA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPSFQI*YFMSME
Trigger: TTCCATCGACATGAAGTACCATATTTGGAAGCTAGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTTGATATCGAGAGATaGAGATATCTTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFDIER*RYLSED
Trigger: GTCCTCTGAAAGATATCTTCATCTCTCGATATCAAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCCATATCTCTTTTGTaGCTGGAATCTAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSISLL*LESNFS
Trigger: GGAGAAATTAGATTCCAGTCACAAAAGAGATATGGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCACGCTTATATTCTTTaGCAGGCTCCAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFHAYIL*QAPISS
Trigger: AGATGAGATTGGAGCCTGTCAAAGAATATAAGCGTG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTTCAAGGTTTCCGTTaGCATCTGCAGGTTATAATT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFQGFR*HLQVII
Trigger: AATTATAACCTGCAGATGTCAACGGAAACCTTGAAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGTTTTTGGGAAGCTTaGCTTTCTTTAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSFWEA*LSLDPL
Trigger: AAGAGGATCTAAAGAAAGTCAAGCTTCCCAAAAACT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGTTTTTGGGAAGCTTaGCTTTCTTTAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSFWEA*LSLDPL
Trigger: AAGAGGATCTAAAGAAAGTCAAGCTTCCCAAAAACT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCCACTAAAATTTCTTaGGGTGGTAACAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSTKIS*GGNSFT
Trigger: TGTGAAGCTGTTACCACCTCAAGAAATTTTAGTGGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATGGAAGGTCTCAAATaGTTGCAAATGGCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIMEGLK*LQMASK
Trigger: TTTGCTAGCCATTTGCAATCATTTGAGACCTTCCAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCAAGCCCATTTATCATaGGAATGCTCAGCATACTTG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFQAHLS*ECSAYL
Trigger: CAAGTATGCTGAGCATTCTCATGATAAATGGGCTTG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCCCTCTTGAAGTTATaGGATTTACACCACAGAATG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSLLKL*DLHHRM
Trigger: CATTCTGTGGTGTAAATCTCATAACTTCAAGAGGGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTTGCTCTTCCCTCTTaGAGTTATGAGATTTACACC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFALPS*SYEIYT
Trigger: GGTGTAAATCTCATAACTTCAAGAGGGAAGAGCAAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTCGACTGGATTCACTaGTCTCAAAATAAACACGCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFDWIH*SQNKHA
Trigger: AGCGTGTTTATTTTGAGATCAGTGAATCCAGTCGAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCTTCAGAAACTTGGTaGCATTTCTCTTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSSETW*HFSLLR
Trigger: TCTCAGTAAAGAGAAATGTCACCAAGTTTCTGAAGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGATCTCCATACTTGTTaGTCACCTTTCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTDLHTC*SPFSSQ
Trigger: TTGTGAAGAGAAAGGTGATCAACAAGTATGGAGATC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTGGCAAGCATTTCTTaGAGTGCTCTGACAGATAAG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLASIS*SALTDK
Trigger: CTTATCTGTCAGAGCACTGCAAGAAATGCTTGCCAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGTTTTGGCATCTTGTaGTTTGTAGGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSFGIL*FVGDPK
Trigger: CTTTGGGTCACCTACAAAGCACAAGATGCCAAAACT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATGTTTAATCGATCAATaGAATTCAATACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVCLIDQ*NSIRGP
Trigger: TGGCCCTCGTATTGAATTGCATTGATCGATTAAACA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGTTTAATCGATCAATaGAATTCAATACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKCLIDQ*NSIRGP
Trigger: TGGCCCTCGTATTGAATTGCATTGATCGATTAAACA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGATCCCTGCAAAGTGTaGTACACTATTGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIDPCKV*YTIVDV
Trigger: AACATCTACAATAGTGTAGCACACTTTGCAGGGATC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATGTTTGATTTCTTGGTaGGCTCATCTAGTAATGCAT +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVCLISW*AHLVMH
Trigger: ATGCATTACTAGATGAGCGCACCAAGAAATCAAACA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGACCATGTAGCAGTTaGTGCGTTTCACACTTTCAT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRPCSS*CVSHFH
Trigger: ATGAAAGTGTGAAACGCAGCAACTGCTACATGGTCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTTGACAACAATTTGTaGCATACAGCCTTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFDNNL*HTAFLD
Trigger: GTCCAAAAAGGCTGTATGGCACAAATTGTTGTCAAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTTGACAACAATTTGTaGCATACAGCCTTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFDNNL*HTAFLD
Trigger: GTCCAAAAAGGCTGTATGGCACAAATTGTTGTCAAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAATTTGCTTGGTGACTaGCAGAGCTTTAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSNLLGD*QSFREI
Trigger: AATTTCTCTAAAGCTCTGGCAGTCACCAAGCAAATT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTGCCATATAACCAGTaGTCTCCTGAAGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVPYNQ*SPEEQR
Trigger: TCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCAGAACCAGCTGTTTaGCATTGTGAGTTACAGATG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSEPAV*HCELQM
Trigger: CATCTGTAACTCACAATGGCAAACAGCTGGTTCTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGCTAAGTTGTGCTCTTaGAGTGTATGTGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKAKLCS*SVCVSK
Trigger: TTTTGAAACACATACACTGCAAGAGCACAACTTAGC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGCTAAGTTGTGCTCTTaGAGTGTATGTGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LILETVTSKYHGKIRSKVAKLCS*SVCVSK
Trigger: TTTTGAAACACATACACTGCAAGAGCACAACTTAGC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTGGCTTATAGCCATTaGACATCATATAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLAYSH*TSYSFW
Trigger: CCAAAAACTATATGATGTCCAATGGCTATAAGCCAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGATCAGCTAGTTCTTaGTCTGAAGGCTCAATGTTA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGSASS*SEGSML
Trigger: TAACATTGAGCCTTCAGACCAAGAACTAGCTGATCC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGTACTTGTTGTCAATaGCGTAGAAGAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSTCCQ*RRRAVR
Trigger: TCTCACAGCTCTTCTACGCCATTGACAACAAGTACT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGAGTTGCTGTAACATaGAAGGTCTCAAATGATTGC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGVAVT*KVSNDC
Trigger: GCAATCATTTGAGACCTTCCATGTTACAGCAACTCC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCAGCTTCTTCTTCTTaGCCCAGATATTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPASSS*PRYCDS
Trigger: ACTATCACAATATCTGGGCCAAGAAGAAGAAGCTGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAAGAATTTGATCTCCTaGTCATGGGGAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTKNLIS*SWGDFS
Trigger: AGAAAAGTCTCCCCATGACCAGGAGATCAAATTCTT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAAGAATTTGATCTCCTaGTCATGGGGAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIKNLIS*SWGDFS
Trigger: AGAAAAGTCTCCCCATGACCAGGAGATCAAATTCTT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCCTAGCTTCCAAATATaGTACTTCATGTCGATGGAA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIPSFQI*YFMSME
Trigger: TTCCATCGACATGAAGTACCATATTTGGAAGCTAGG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTTGATATCGAGAGATaGAGATATCTTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIFDIER*RYLSED
Trigger: GTCCTCTGAAAGATATCTTCATCTCTCGATATCAAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAATCTAATTTCTCCTTaGTTTCCTTTGATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKINLISP*FPLMLG
Trigger: TCCGAGCATCAAAGGAAATCAAGGAGAAATTAGATT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAATCTAATTTCTCCTTaGTTTCCTTTGATGCTCGGA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTNLISP*FPLMLG
Trigger: TCCGAGCATCAAAGGAAATCAAGGAGAAATTAGATT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCCACTAAAATTTCTTaGGGTGGTAACAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSTKIS*GGNSFT
Trigger: TGTGAAGCTGTTACCACCTCAAGAAATTTTAGTGGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTATGGAAGGTCTCAAATaGTTGCAAATGGCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFMEGLK*LQMASK
Trigger: TTTGCTAGCCATTTGCAATCATTTGAGACCTTCCAT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCTTCAGAAACTTGGTaGCATTTCTCTTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSSETW*HFSLLR
Trigger: TCTCAGTAAAGAGAAATGTCACCAAGTTTCTGAAGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCAATAATAAGACCTTaGATGATGGCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSIIRP*MMASKM
Trigger: CATCTTGCTGGCCATCATTCAAGGTCTTATTATTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTGTGAATGTTTGCAATaGACTGGAGTACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKICECLQ*TGVQLH
Trigger: ATGAAGTTGTACTCCAGTGCATTGCAAACATTCACA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGTGAATGTTTGCAATaGACTGGAGTACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTCECLQ*TGVQLH
Trigger: ATGAAGTTGTACTCCAGTGCATTGCAAACATTCACA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTGTTTAATCGATCAATaGAATTCAATACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKICLIDQ*NSIRGP
Trigger: TGGCCCTCGTATTGAATTGCATTGATCGATTAAACA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTTAATTCTGTCCTTTaGCCAAACATTGTGAGCATT +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFNSVL*PNIVSI
Trigger: AATGCTCACAATGTTTGGGCAAAGGACAGAATTAAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGTTTGATTTCTTGGTaGGCTCATCTAGTAATGCAT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTCLISW*AHLVMH
Trigger: ATGCATTACTAGATGAGCGCACCAAGAAATCAAACA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGCCTGTATATTGTCTaGAGTGTAGAATCAATCAGA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKISLYIV*SVESIR
Trigger: TCTGATTGATTCTACACTGCAGACAATATACAGGCT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTCTCAAATGATTaGAAATGGCTAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSKVSND*KWLANI
Trigger: AATGTTTGCTAGCCATTTGCAATCATTTGAGACCTT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTGACATCTTGCTTTTaGTGTCTCCAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLTSCF*CLQLKM
Trigger: CATTTTTAACTGGAGACAGCAAAAGCAAGATGTCAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGCTTTAGAGAAATTATaGTGTCCAGATTCATCAATG +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSALEKL*CPDSSM
Trigger: CATTGATGAATCTGGACAGCATAATTTCTCTAAAGC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAATTTGCTTGGTGACTaGCAGAGCTTTAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKINLLGD*QSFREI
Trigger: AATTTCTCTAAAGCTCTGGCAGTCACCAAGCAAATT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGCTAAGTTGTGCTCTTaGAGTGTATGTGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTAKLCS*SVCVSK
Trigger: TTTTGAAACACATACACTGCAAGAGCACAACTTAGC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATTCTGATCTGTAGATaGTATCGTCAAACATTCATC +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSILICR*YRQTFI
Trigger: GATGAATGTTTGACGATACCATCTACAGATCAGAAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATTCTGATCTGTAGATaGTATCGTCAAACATTCATC +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKILICR*YRQTFI
Trigger: GATGAATGTTTGACGATACCATCTACAGATCAGAAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACCAATCAAGGTTATTaGAGAATTGAGCACAATTGT +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTNQGY*RIEHNC
Trigger: ACAATTGTGCTCAATTCTCCAATAACCTTGATTGGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTGGCTTATAGCCATTaGACATCATATAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILAYSH*TSYSFW
Trigger: CCAAAAACTATATGATGTCCAATGGCTATAAGCCAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGAAAGAATAGATAATTaGCTAAGTTGTGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KLILETVTSKYHGKIRSKERIDN*LSCALA
Trigger: TGCAAGAGCACAACTTAGCCAATTATCTATTCTTTC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGAAAGAATAGATAATTaGCTAAGTTGTGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: FKLILETVTSKYHGKIRSERIDN*LSCALA
Trigger: TGCAAGAGCACAACTTAGCCAATTATCTATTCTTTC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTTGATATCGAGAGATaGAGATATCTTTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFDIER*RYLSED
Trigger: GTCCTCTGAAAGATATCTTCATCTCTCGATATCAAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR TCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCCATATCTCTTTTGTaGCTGGAATCTAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSISLL*LESNFS
Trigger: GGAGAAATTAGATTCCAGTCACAAAAGAGATATGGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGCCTGTATATTGTCTaGAGTGTAGAATCAATCAGA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSLYIV*SVESIR
Trigger: TCTGATTGATTCTACACTGCAGACAATATACAGGCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAAGGTCTCAAATGATTaGAAATGGCTAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTKVSND*KWLANI
Trigger: AATGTTTGCTAGCCATTTGCAATCATTTGAGACCTT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTGACATCTTGCTTTTaGTGTCTCCAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKILTSCF*CLQLKM
Trigger: CATTTTTAACTGGAGACAGCAAAAGCAAGATGTCAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGCTTTAGAGAAATTATaGTGTCCAGATTCATCAATG +
Preference number: 4 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTALEKL*CPDSSM
Trigger: CATTGATGAATCTGGACAGCATAATTTCTCTAAAGC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAATTTGCTTGGTGACTaGCAGAGCTTTAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFNLLGD*QSFREI
Trigger: AATTTCTCTAAAGCTCTGGCAGTCACCAAGCAAATT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGCTAAGTTGTGCTCTTaGAGTGTATGTGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFAKLCS*SVCVSK
Trigger: TTTTGAAACACATACACTGCAAGAGCACAACTTAGC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACCAATCAAGGTTATTaGAGAATTGAGCACAATTGT +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKITNQGY*RIEHNC
Trigger: ACAATTGTGCTCAATTCTCCAATAACCTTGATTGGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTGGCTTATAGCCATTaGACATCATATAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLAYSH*TSYSFW
Trigger: CCAAAAACTATATGATGTCCAATGGCTATAAGCCAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGAAAGAATAGATAATTaGCTAAGTTGTGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KLFKLILETVTSKYHGKIERIDN*LSCALA
Trigger: TGCAAGAGCACAACTTAGCCAATTATCTATTCTTTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR GCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGCTTTAGAGAAATTATaGTGTCCAGATTCATCAATG +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFALEKL*CPDSSM
Trigger: CATTGATGAATCTGGACAGCATAATTTCTCTAAAGC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CCA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACCAATCAAGGTTATTaGAGAATTGAGCACAATTGT +
Preference number: 4 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTNQGY*RIEHNC
Trigger: ACAATTGTGCTCAATTCTCCAATAACCTTGATTGGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp AGCTCCTCTCGGATCTCCTCTGGGCAGGGGCAGTTCTCTCCCAGGTaGAAGTTGAGAAGCATGTTGATCTGCTCCTGGGGCGGTGAGCGG +
Preference number: 5 (lower is better)
Translates to: SSSRISSGQGQFSPR*KLRSMLICSWGGER
Trigger: CCGCTCACCGCCCCAGGAGCAGATCAACATGCTTCTCAACTTTCACCTGGGAGAGAACTGCCCCTGCCCAGAGGAGATCCGAGAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp TCCTGGGTGTCCCCCTTGCCATCGGTCTTCAGCTGCTCCTCCTCCTaGACAGTCTTCACCGCCTTCTTCTTTAGCTTCTCCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SWVSPLPSVFSCSSS*TVFTAFFFSFSRVG
Trigger: CCCCACCCTGGAGAAGCTAAAGAAGAAGGCGGTGAAGACTGTGCAGGAGGAGGAGCAGCTGAAGACCGATGGCAAGGGGGACACCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp GTCCTCACTCGTCACCACAAAGCAAGGGGTGGAGAACCTGAAGCCTaGCTTGAGGCATGTCCTCAGGCCCACCCCAGGCAATCCGTGTCT +
Preference number: 5 (lower is better)
Translates to: VLTRHHKARGGEPEA*LEACPQAHPRQSVS
Trigger: AGACACGGATTGCCTGGGGTGGGCCTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCCACCCCTTGCTTTGTGGTGACGAGTGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp GAAGGGAGGTCGAGGGCAGGGTTCTCTGAGATCTTAATAGCACCCTaGATAGCCGCCAGCAGTCCGTTGCCTCCTTCACCCCTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: EGRSRAGFSEILIAP*IAASSPLPPSPLRA
Trigger: AGCTCTGAGGGGTGAAGGAGGCAACGGACTGCTGGCGGCTATGCAGGGTGCTATTAAGATCTCAGAGAACCCTGCCCTCGACCTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp AGGAGCTCAGCCTCCTGGGTGTCCCCCTTGCCATCGGTCTTCAGCTaGTCCTCCTCCTGCACAGTCTTCACCGCCTTCTTCTTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: RSSASWVSPLPSVFS*SSSCTVFTAFFFSF
Trigger: GAAGCTAAAGAAGAAGGCGGTGAAGACTGTGCAGGAGGAGGAGCAGCTGAAGACCGATGGCAAGGGGGACACCCAGGAGGCTGAGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp GAAGGCTTGATCATCAGCCCCCAGCTCAATGTCAGGACGACAGCCTaGCCTGGCCCAGCCAACACGCATGTCTCCTCCAGTTACCACTTC +
Preference number: 5 (lower is better)
Translates to: EGLIISPQLNVRTTA*PGPANTHVSSSYHF
Trigger: GAAGTGGTAACTGGAGGAGACATGCGTGTTGGCTGGGCCAGGCCAGGCTGTCGTCCTGACATTGAGCTGGGGGCTGATGATCAAGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp TTCTGTCTTGTAACCCTGGGAAGGGAGGTCGAGGGCAGGGTTCTCTaGGATCTTAATAGCACCCTGCATAGCCGCCAGCAGTCCGTTGCC +
Preference number: 5 (lower is better)
Translates to: FCLVTLGREVEGRVL*DLNSTLHSRQQSVA
Trigger: GGCAACGGACTGCTGGCGGCTATGCAGGGTGCTATTAAGATCTCAGAGAACCCTGCCCTCGACCTCCCTTCCCAGGGTTACAAGACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp CCAAGGTCAAGGCAGCAGCTCACCACATCGTCTGACTTGAGCAGATaGTGGTTGATGGAAGCCACAGCTCTGGGTATCCGTCCTGACCAC +
Preference number: 5 (lower is better)
Translates to: PRSRQQLTTSSDLSR*WLMEATALGIRPDH
Trigger: GTGGTCAGGACGGATACCCAGAGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTCAGACGATGTGGTGAGCTGCTGCCTTGACCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp ACTTGTTGTCAATGGCGTAGAAGAGCTGTGAGAGGTCCACGTGGCTaGACAGGGCAGAAGCCACTCGGCTATTTCCCAGAGCGCACACAG +
Preference number: 5 (lower is better)
Translates to: TCCQWRRRAVRGPRG*TGQKPLGYFPERTQ
Trigger: CTGTGTGCGCTCTGGGAAATAGCCGAGTGGCTTCTGCCCTGTGCAGCCACGTGGACCTCTCACAGCTCTTCTACGCCATTGACAACAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp GTATCCTCCTCCTCCTCTTCCTCTTCCTCCAAGGGAACCCCGCAGTaGACCAGAAGGTCCTCATGGAAGTCATACAGCTCCTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: VSSSSSSSSSKGTPQ*TRRSSWKSYSSSRI
Trigger: GATCCGAGAGGAGCTGTATGACTTCCATGAGGACCTTCTGGTTCACTGCGGGGTTCCCTTGGAGGAAGAGGAAGAGGAGGAGGAGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CACCACCTCCACCATTCCCTGAAGCTCCCTGGACAGCACAACATTTaGGAGATCCAGAGGGGCGGGGCTGTAACTATTGCCCTGATTGGT +
Preference number: 5 (lower is better)
Translates to: HHLHHSLKLPGQHNI*EIQRGGAVTIALIG
Trigger: ACCAATCAGGGCAATAGTTACAGCCCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCCAGGGAGCTTCAGGGAATGGTGGAGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CCTGACTCGGCCAAGTCATTGATTTCCTTCATCAGGCCTTCCAGCTaGGGGATGTCAGGACACATGTCCTCCACCTTGTCTGGCATCCCC +
Preference number: 5 (lower is better)
Translates to: PDSAKSLISFIRPSS*GMSGHMSSTLSGIP
Trigger: GGGGATGCCAGACAAGGTGGAGGACATGTGTCCTGACATCCCTCAGCTGGAAGGCCTGATGAAGGAAATCAATGACTTGGCCGAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp ACCCGACCACATCTCCTGGCTGCCAAGTTCGTCCAAAATACCCACTaGCTTGATGCCAACGCTGACCCCTGCTTCCTTCAAACACGAAGG +
Preference number: 5 (lower is better)
Translates to: TRPHLLAAKFVQNTH*LDANADPCFLQTRR
Trigger: CCTTCGTGTTTGAAGGAAGCAGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGACGAACTTGGCAGCCAGGAGATGTGGTCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp AGGTCAAGGCAGCAGCTCACCACATCGTCTGACTTGAGCAGATGCTaGTTGATGGAAGCCACAGCTCTGGGTATCCGTCCTGACCACAGA +
Preference number: 5 (lower is better)
Translates to: RSRQQLTTSSDLSRC*LMEATALGIRPDHR
Trigger: TCTGTGGTCAGGACGGATACCCAGAGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTCAGACGATGTGGTGAGCTGCTGCCTTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp CTTGATCATCAGCCCCCAGCTCAATGTCAGGACGACAGCCTGGCCTaGCCCAGCCAACACGCATGTCTCCTCCAGTTACCACTTCAAATT +
Preference number: 5 (lower is better)
Translates to: LDHQPPAQCQDDSLA*PSQHACLLQLPLQI
Trigger: AATTTGAAGTGGTAACTGGAGGAGACATGCGTGTTGGCTGGGCCAGGCCAGGCTGTCGTCCTGACATTGAGCTGGGGGCTGATGATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp TGTGATAGTTCTCAGCCACCACCTCCACCATTCCCTGAAGCTCCCTaGACAGCACAACATTTGAGAGATCCAGAGGGGCGGGGCTGTAAC +
Preference number: 5 (lower is better)
Translates to: CDSSQPPPPPFPEAP*TAQHLRDPEGRGCN
Trigger: GTTACAGCCCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCCAGGGAGCTTCAGGGAATGGTGGAGGTGGTGGCTGAGAACTATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTGGTCAGGGCAGAAGTaGGCCGCCATGTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRWSGQK*AAMSGS
Trigger: CGAGCCAGACATGGCGGCCAACTTCTGCCCTGACCA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCCTGGGTGTCCCCCTaGCCATCGGTCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSWVSP*PSVFSC
Trigger: GCAGCTGAAGACCGATGGCAAGGGGGACACCCAGGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CGCTACAGTGCACGGCCTCGGTTAGCATGCTCAGGGCTTTTGTCTTaGGAATCTGCAAGGGAATCTCAGGGCTCTGCTTCTGATGGTCCT +
Preference number: 5 (lower is better)
Translates to: RYSARPRLACSGLLS*ESARESQGSASDGP
Trigger: AGGACCATCAGAAGCAGAGCCCTGAGATTCCCTTGCAGATTCTCAAGACAAAAGCCCTGAGCATGCTAACCGAGGCCGTGCACTGTAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CCTTTGAAGAAGTTGGCCATAAAGGCTTCTGGCTTCTCAGCCTTCTaGCCGCGCCGTCTCGTCTTCTTTACTGTCACGTCTGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: PLKKLAIKASGFSAF*PRRLVFFTVTSAHR
Trigger: CCTGTGGGCAGACGTGACAGTAAAGAAGACGAGACGGCGCGGTCAGAAGGCTGAGAAGCCAGAAGCCTTTATGGCCAACTTCTTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTCTTGTGGGTCACCTaGAGGCATGGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVLWVT*RHGGLS
Trigger: GGACAGCCCTCCATGCCTCAAGGTGACCCACAAGAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGTCTTGTGGGTCACCTaGAGGCATGGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFVLWVT*RHGGLS
Trigger: GGACAGCCCTCCATGCCTCAAGGTGACCCACAAGAC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAACCTGAAGCCTGGCTaGAGGCATGTCCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRNLKPG*RHVLRP
Trigger: GGGCCTGAGGACATGCCTCAAGCCAGGCTTCAGGTT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTCCGCATCCTGGATTaGGTTCTCCTGGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFRILD*VLLGPA
Trigger: CGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTCCGCATCCTGGATTaGGTTCTCCTGGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFRILD*VLLGPA
Trigger: CGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCACAAGAGCGGCCAGCTaGCAGAATAGGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRTRAAS*QNRLAT
Trigger: GGTGGCCAGCCTATTCTGCAAGCTGGCCGCTCTTGT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACAAGAGCGGCCAGCTaGCAGAATAGGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTRAAS*QNRLAT
Trigger: GGTGGCCAGCCTATTCTGCAAGCTGGCCGCTCTTGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCCTGGGTGTCCCCCTaGCCATCGGTCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSWVSP*PSVFSC
Trigger: GCAGCTGAAGACCGATGGCAAGGGGGACACCCAGGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCATGTCTTCCCGTACTaGCTCCTGCTGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHHVFPY*LLLVPQ
Trigger: CTGCGGGACCAGCAGGAGCAAGTACGGGAAGACATG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CTGTCTGGGATCTTGACGTGGTCAAGCACGTTAGATACATTCCACTaGAAGAGTGCCGCAGGAGAATTGCATGCCCGTAGAGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: LSGILTWSSTLDTFH*KSAAGELHARRAGS
Trigger: GGACCCTGCTCTACGGGCATGCAATTCTCCTGCGGCACTCTTTCAGTGGAATGTATCTAACGTGCTTGACCACGTCAAGATCCCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp AATGCTGGGTACTCCAAGGTCAAGGCAGCAGCTCACCACATCGTCTaGCTTGAGCAGATGCTGGTTGATGGAAGCCACAGCTCTGGGTAT +
Preference number: 5 (lower is better)
Translates to: NAGYSKVKAAAHHIV*LEQMLVDGSHSSGY
Trigger: ATACCCAGAGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTCAGACGATGTGGTGAGCTGCTGCCTTGACCTTGGAGTACCCAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp TTGATCTTTAATGCCATAAACACGGTCCAAGAACAGCACCATGGGTaGCTTGTGGTCAGGGCAGAAGTTGGCCGCCATGTCTGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: LIFNAINTVQEQHHG*LVVRAEVGRHVWLA
Trigger: AGCGAGCCAGACATGGCGGCCAACTTCTGCCCTGACCACAAGGCACCCATGGTGCTGTTCTTGGACCGTGTTTATGGCATTAAAGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp TTTGGACCTCAAAGGCTGTTCCACCTGCTCAAGGTGGAAGAGAGCTaGCGAAATGCTCTGCACCCGCTCCACCGTCTTTTCTGGATTAGA +
Preference number: 5 (lower is better)
Translates to: FGPQRLFHLLKVEES*RNALHPLHRLFWIR
Trigger: TCTAATCCAGAAAAGACGGTGGAGCGGGTGCAGAGCATTTCGGCAGCTCTCTTCCACCTTGAGCAGGTGGAACAGCCTTTGAGGTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp CATGGAGGCATCATCCAGGTTAATCATGCACCCGACCACATCTCCTaGCTGCCAAGTTCGTCCAAAATACCCACTGCCTTGATGCCAACG +
Preference number: 5 (lower is better)
Translates to: HGGIIQVNHAPDHIS*LPSSSKIPTALMPT
Trigger: CGTTGGCATCAAGGCAGTGGGTATTTTGGACGAACTTGGCAGCCAGGAGATGTGGTCGGGTGCATGATTAACCTGGATGATGCCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp TCGACTCCAGAGTACAGGCTGGATGGTTTGGACATCCAGCCGAGGTaGACACTGTGGGGTGGGGTTCTTCTCTTCACTCTTAAATATGGC +
Preference number: 5 (lower is better)
Translates to: STPEYRLDGLDIQPR*TLWGGVLLFTLKYG
Trigger: GCCATATTTAAGAGTGAAGAGAAGAACCCCACCCCACAGTGTCCACCTCGGCTGGATGTCCAAACCATCCAGCCTGTACTCTGGAGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp CAGAAGGTCCTCATGGAAGTCATACAGCTCCTCTCGGATCTCCTCTaGGCAGGGGCAGTTCTCTCCCAGGTGAAAGTTGAGAAGCATGTT +
Preference number: 5 (lower is better)
Translates to: QKVLMEVIQLLSDLL*AGAVLSQVKVEKHV
Trigger: AACATGCTTCTCAACTTTCACCTGGGAGAGAACTGCCCCTGCCCAGAGGAGATCCGAGAGGAGCTGTATGACTTCCATGAGGACCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp AGGTCTGACATGATGTCTGTATCTCCTGCCTCACCCTTTACAAAGTaGACCAGCTCAGTGGTGACACCTGGCTCAGTCACTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RSDMMSVSPASPFTK*TSSVVTPGSVTSAL
Trigger: CAGGGCAGAAGTGACTGAGCCAGGTGTCACCACTGAGCTGGTCCACTTTGTAAAGGGTGAGGCAGGAGATACAGACATCATGTCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTCTTGTGGGTCACCTaGAGGCATGGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDVLWVT*RHGGLS
Trigger: GGACAGCCCTCCATGCCTCAAGGTGACCCACAAGAC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTGACTGGAGCCTCCTaGCAGGCCTTTTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLTGAS*QAFSPA
Trigger: GGCTGGAGAAAAGGCCTGCAAGGAGGCTCCAGTCAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGTCTGCAGCAAGCCTTaGACTGGAGCCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHVCSKP*TGASLQ
Trigger: CTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGAC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCCCTGGGGGTTTaGGTGTTGAAGACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRSLGV*VLKTER
Trigger: CCTCTCAGTCTTCAACACCAAAACCCCCAGGGAGCG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGGTCCAACAGACTCTaGAGACGGGAATCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGSNRL*RRESLG
Trigger: GCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGGTCCAACAGACTCTaGAGACGGGAATCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGSNRL*RRESLG
Trigger: GCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp GCTTTTGTCTTGAGAATCTGCAAGGGAATCTCAGGGCTCTGCTTCTaGTGGTCCTCACTCGTCACCACAAAGCAAGGGGTGGAGAACCTG +
Preference number: 5 (lower is better)
Translates to: AFVLRICKGISGLCF*WSSLVTTKQGVENL
Trigger: CAGGTTCTCCACCCCTTGCTTTGTGGTGACGAGTGAGGACCATCAGAAGCAGAGCCCTGAGATTCCCTTGCAGATTCTCAAGACAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CCTGGAGCAACTCCCCAATGCTGTCATACTGTCTCCGAAGGAGGTTaGACATCATCCTCACCAGTTCCGCATCCTGGATTTGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PGATPQCCHTVSEGG*TSSSPVPHPGFGSP
Trigger: AGGAGAACCAAATCCAGGATGCGGAACTGGTGAGGATGATGTTCAACCTCCTTCGGAGACAGTATGACAGCATTGGGGAGTTGCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CAAGATCACTTCAATGACATGGGGCATCTCAGTGTACCGGGCACCTaGCTCGGCCAAGTCATTGATTTCCTTCATCAGGCCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QDHFNDMGHLSVPGT*LGQVIDFLHQAFQL
Trigger: CAGCTGGAAGGCCTGATGAAGGAAATCAATGACTTGGCCGAGTCAGGTGCCCGGTACACTGAGATGCCCCATGTCATTGAAGTGATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp GCCGCCCCTTCTCCGCCATTTTCAACGGTGTTGGCAAGCATTTCTTaGAGTGCTCTGACAGATAAGGACTGTTCCAGCACGAAATTGCAG +
Preference number: 5 (lower is better)
Translates to: AAPSPPFSTVLASIS*SALTDKDCSSTKLQ
Trigger: CTGCAATTTCGTGCTGGAACAGTCCTTATCTGTCAGAGCACTGCAAGAAATGCTTGCCAACACCGTTGAAAATGGCGGAGAAGGGGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp AAGTTCAAACTGAAACAAGGACGTGCTGGTAGGCTGAAGGAAGACTaGAGGGAACACTTTGGTGTTAGGCTCCACCTGGTAGCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: KFKLKQGRAGRLKED*REHFGVRLHLVAGA
Trigger: GGCACCTGCTACCAGGTGGAGCCTAACACCAAAGTGTTCCCTGCAGTCTTCCTTCAGCCTACCAGCACGTCCTTGTTTCAGTTTGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp CGAAGGAGGTTGAACATCATCCTCACCAGTTCCGCATCCTGGATTTaGTTCTCCTGGGCCCAGCGGATCATTGTCTGTGAAACTAGTTCC +
Preference number: 5 (lower is better)
Translates to: RRRLNIILTSSASWI*FSWAQRIIVCETSS
Trigger: GGAACTAGTTTCACAGACAATGATCCGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAACTGGTGAGGATGATGTTCAACCTCCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp TGTCTCCGAAGGAGGTTGAACATCATCCTCACCAGTTCCGCATCCTaGATTTGGTTCTCCTGGGCCCAGCGGATCATTGTCTGTGAAACT +
Preference number: 5 (lower is better)
Translates to: CLRRRLNIILTSSAS*IWFSWAQRIIVCET
Trigger: AGTTTCACAGACAATGATCCGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAACTGGTGAGGATGATGTTCAACCTCCTTCGGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp GAAGAGAGCTGCCGAAATGCTCTGCACCCGCTCCACCGTCTTTTCTaGATTAGAAGGCTCGTCATTCCTCAGAACGTCCTTGTAGAGGTT +
Preference number: 5 (lower is better)
Translates to: EESCRNALHPLHRLF*IRRLVIPQNVLVEV
Trigger: AACCTCTACAAGGACGTTCTGAGGAATGACGAGCCTTCTAATCCAGAAAAGACGGTGGAGCGGGTGCAGAGCATTTCGGCAGCTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGAGAAGGCTGTGGATTaGGTGTCGGATTTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHEKAVD*VSDFPR
Trigger: CCGGGGAAAATCCGACACCAAATCCACAGCCTTCTC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGAGAAGGCTGTGGATTaGGTGTCGGATTTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFREKAVD*VSDFPR
Trigger: CCGGGGAAAATCCGACACCAAATCCACAGCCTTCTC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCATCACCGACACCATaGCCTCCCCATCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSSPTP*PPHPSP
Trigger: TGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCATCACCGACACCATaGCCTCCCCATCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSSPTP*PPHPSP
Trigger: TGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACTGCAGGGAACACTTaGGTGTTAGGCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTAGNT*VLGSTW
Trigger: CCAGGTGGAGCCTAACACCAAAGTGTTCCCTGCAGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTACAGGCTGGATGGTTaGGACATCCAGCCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDYRLDG*DIQPRW
Trigger: CCACCTCGGCTGGATGTCCAAACCATCCAGCCTGTA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCGCTCTGTCTCCACTTaGAGGAAGCTGCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRSVST*RKLLGI
Trigger: AATGCCCAGCAGCTTCCTCAAAGTGGAGACAGAGCG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCTGTCTCCACTTaGAGGAAGCTGCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFRSVST*RKLLGI
Trigger: AATGCCCAGCAGCTTCCTCAAAGTGGAGACAGAGCG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTGACTGGAGCCTCCTaGCAGGCCTTTTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLTGAS*QAFSPA
Trigger: GGCTGGAGAAAAGGCCTGCAAGGAGGCTCCAGTCAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCGCACATCTGCAGCTaGACAGACTCAGGCAATCGG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSHICS*TDSGNR
Trigger: CCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATGGTCAGGGCAGAAGTaGGCCGCCATGTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKWSGQK*AAMSGS
Trigger: CGAGCCAGACATGGCGGCCAACTTCTGCCCTGACCA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAAGACTGAGAGGGGATaGTGGCGGTTAAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDKTERG*WRLRLG
Trigger: GCCCAGCCTTAACCGCCACAATCCCCTCTCAGTCTT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCGCTCCCTGGGGGTTTaGGTGTTGAAGACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRSLGV*VLKTER
Trigger: CCTCTCAGTCTTCAACACCAAAACCCCCAGGGAGCG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGGTCGGGCCTGGCTTaGCTGATAATTGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRSGLA*LIIGWA
Trigger: TGCCCAGCCAATTATCAGCAAAGCCAGGCCCGACCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGATCATCTTCCAATTaGCTCCTCTCCGTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGSSSN*LLSVSA
Trigger: CGCGCTCACGGAGAGGAGCAAATTGGAAGATGATCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGATCATCTTCCAATTaGCTCCTCTCCGTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGSSSN*LLSVSA
Trigger: CGCGCTCACGGAGAGGAGCAAATTGGAAGATGATCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp TCAGAGGTCCCAGGCGGGAAGTTTTGGCATCTTGTGCTTTGTAGGTaGCCCAAAGGCCACTGGCTACATGCTGAACAAAGCAGACAGAAT +
Preference number: 5 (lower is better)
Translates to: SEVPGGKFWHLVLCR*PKGHWLHAEQSRQN
Trigger: ATTCTGTCTGCTTTGTTCAGCATGTAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAGATGCCAAAACTTCCCGCCTGGGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp GGAAGCTTGACTTTCTTTAGATCCTCTTCCGCAGCTGGGTTAACATaGGCAATGTGGCACCCCAGGGCCAGCAAGGTTTTCAAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: GSLTFFRSSSAAGLT*AMWHPRASKVFKVS
Trigger: GGAAACCTTGAAAACCTTGCTGGCCCTGGGGTGCCACATTGCTCATGTTAACCCAGCTGCGGAAGAGGATCTAAAGAAAGTCAAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CCATCTTTGGGAAGGCAATCTGCGACTTCTCAGTACCCAGCACATTaGCCATCACTTCCATCACAGTCTCATGCATGCCGAGGACTCTCA +
Preference number: 5 (lower is better)
Translates to: PSLGRQSATSQYPAH*PSLPSQSHACRGLS
Trigger: TGAGAGTCCTCGGCATGCATGAGACTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTGAGAAGTCGCAGATTGCCTTCCCAAAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CTTCATCAGTGTCCCTACAGCTGTATCGTGATTTTGCGAGTGAGATaGGCTCCTGGTCGCCTGGAGTACACATGTTCAGACCAATGGGCA +
Preference number: 5 (lower is better)
Translates to: LHQCPYSCIVILRVR*APGRLEYTCSDQWA
Trigger: TGCCCATTGGTCTGAACATGTGTACTCCAGGCGACCAGGAGCTCATCTCACTCGCAAAATCACGATACAGCTGTAGGGACACTGATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp AAGGTACCTTCAGGCAGTAATAGCCCACCACACAGACCAGAGAGATaGTGGTGTGGACAATGGCCAAAGCACGCAGTGTTGGTGCCATAT +
Preference number: 5 (lower is better)
Translates to: KVPSGSNSPPHRPER*WCGQWPKHAVLVPY
Trigger: ATATGGCACCAACACTGCGTGCTTTGGCCATTGTCCACACCATCATCTCTCTGGTCTGTGTGGTGGGCTATTACTGCCTGAAGGTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp ACAGCACAACATTTGAGAGATCCAGAGGGGCGGGGCTGTAACTATTaGCCTGATTGGTCTGGGACACACATCGAAGCTTCTCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: TAQHLRDPEGRGCNY*PDWSGTHIEASHSL
Trigger: GAGAGAATGAGAAGCTTCGATGTGTGTCCCAGACCAATCAGGGCAATAGTTACAGCCCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp GAAGTAGGCTATCAAGTCTTGCAGGGTCTGCAGAACCTCTTCTGTTaGCAAGGCGACAGGGGCAGTTGTGCGATTGTTTCCACTGACAAA +
Preference number: 5 (lower is better)
Translates to: EVGYQVLQGLQNLFC*QGDRGSCAIVSTDK
Trigger: TTTGTCAGTGGAAACAATCGCACAACTGCCCCTGTCGCCTTGCCAACAGAAGAGGTTCTGCAGACCCTGCAAGACTTGATAGCCTACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGGGGCAGTTGTGCGATaGTTTCCACTGACAAACTGG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFGAVVR*FPLTNW
Trigger: CCAGTTTGTCAGTGGAAACAATCGCACAACTGCCCC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGTAGGCTATCAAGTCTaGCAGGGTCTGCAGAACCTC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRVGYQV*QGLQNL
Trigger: GAGGTTCTGCAGACCCTGCAAGACTTGATAGCCTAC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGTAGGCTATCAAGTCTaGCAGGGTCTGCAGAACCTC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFVGYQV*QGLQNL
Trigger: GAGGTTCTGCAGACCCTGCAAGACTTGATAGCCTAC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTCAAACACGAAGGCTaGATCATCAGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFKHEG*IISPQL
Trigger: GAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTCAAACACGAAGGCTaGATCATCAGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFKHEG*IISPQL
Trigger: GAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAAAATACCCACTGCCTaGATGCCAACGCTGACCCCT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHKIPTA*MPTLTP
Trigger: AGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAAAATACCCACTGCCTaGATGCCAACGCTGACCCCT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFKIPTA*MPTLTP
Trigger: AGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGTCTTGTGGGTCACCTaGAGGCATGGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKVLWVT*RHGGLS
Trigger: GGACAGCCCTCCATGCCTCAAGGTGACCCACAAGAC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGTGTGCCGAAGGTCTaGTGGGTCACCTTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDCVPKV*WVTLRH
Trigger: ATGCCTCAAGGTGACCCACAAGACCTTCGGCACACA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGTGTGCCGAAGGTCTaGTGGGTCACCTTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSCVPKV*WVTLRH
Trigger: ATGCCTCAAGGTGACCCACAAGACCTTCGGCACACA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGGACAACATGCCCATaGCCAGATCTAGAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRTTCP*PDLEGS
Trigger: GCTGCCTTCTAGATCTGGCAATGGGCATGTTGTCCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACACTGCAGGGAACACTTaGGTGTTAGGCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDTAGNT*VLGSTW
Trigger: CCAGGTGGAGCCTAACACCAAAGTGTTCCCTGCAGT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGCGGAACTTCTGATTaGCCTGCAGCTTGGACACGT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSGTSD*PAAWTR
Trigger: ACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGCT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGTGAGCGGAACTCTCTaGTCTTTCTGGCAGTTAGGG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRVSGTL*SFWQLG
Trigger: CCCTAACTGCCAGAAAGACAAGAGAGTTCCGCTCAC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGGCCCAGCGGATCATaGTCTGTGAAACTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGPSGS*SVKLVP
Trigger: AGGAACTAGTTTCACAGACAATGATCCGCTGGGCCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTTAGGGAGGGCAGTTaGAGGGGGATGCTGATGATC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFREGS*RGMLMI
Trigger: GATCATCAGCATCCCCCTCAAACTGCCCTCCCTAAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTTAGGGAGGGCAGTTaGAGGGGGATGCTGATGATC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFREGS*RGMLMI
Trigger: GATCATCAGCATCCCCCTCAAACTGCCCTCCCTAAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAAATACAGGCGGTGGTaGGTGAAGTACTGGTCGACC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHKYRRW*VKYWST
Trigger: GGTCGACCAGTACTTCACCAACCACCGCCTGTATTT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCACATGTCCTCCACCTaGTCTGGCATCCCCAGAATA +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFHMSST*SGIPRI
Trigger: TATTCTGGGGATGCCAGACAAGGTGGAGGACATGTG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGTCTCCTCGCCTCTTaGTCTTCTTCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSLLAS*SSSVPG
Trigger: ACCAGGAACGGAAGAAGACAAAGAGGCGAGGAGACT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTCTCCGTGAGCGCGTaGCGACTAAAATGCAGAATG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLSVSA*RLKCRM
Trigger: CATTCTGCATTTTAGTCGCAACGCGCTCACGGAGAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTGTTGCACACCAGCATaGCCTCCGTTCAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFCCTPA*PPFRMA
Trigger: TGCCATTCTGAACGGAGGCAATGCTGGTGTGCAACA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTGTTGCACACCAGCATaGCCTCCGTTCAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRCCTPA*PPFRMA
Trigger: TGCCATTCTGAACGGAGGCAATGCTGGTGTGCAACA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTGAACCCTATGTCCTaGGCTGGCTCATGGAACCTC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLNPMS*AGSWNL
Trigger: GAGGTTCCATGAGCCAGCCAAGGACATAGGGTTCAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTGAACCCTATGTCCTaGGCTGGCTCATGGAACCTC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLNPMS*AGSWNL
Trigger: GAGGTTCCATGAGCCAGCCAAGGACATAGGGTTCAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCAGTACTCTCTAATGTaGGGGGTTCGTCCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFQYSLM*GVRPCR
Trigger: TCGGCAAGGACGAACCCCCAACATTAGAGAGTACTG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCAGTACTCTCTAATGTaGGGGGTTCGTCCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRQYSLM*GVRPCR
Trigger: TCGGCAAGGACGAACCCCCAACATTAGAGAGTACTG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCAAAGCACGCAGTGTaGGTGCCATATAACCAGTGC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPKHAV*VPYNQC
Trigger: GCACTGGTTATATGGCACCAACACTGCGTGCTTTGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGGAAAAGATGGCGTGTaGATTACCAAGCGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRGKDGV*ITKRSH
Trigger: GTGGGACCGCTTGGTAATCAACACGCCATCTTTTCC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCAGGACAGACATGGTaGTGTACCAGGCAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPGQTW*CTRQGR
Trigger: TCTACCTTGCCTGGTACACAACCATGTCTGTCCTGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp GACCTTTCTTTTCAGAGGTCCCAGGCGGGAAGTTTTGGCATCTTGTaGTTTGTAGGTGACCCAAAGGCCACTGGCTACATGCTGAACAAA +
Preference number: 5 (lower is better)
Translates to: DLSFQRSQAGSFGIL*FVGDPKATGYMLNK
Trigger: TTTGTTCAGCATGTAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAGATGCCAAAACTTCCCGCCTGGGACCTCTGAAAAGAAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp CCCCAGAGAGCAAATGGGCACAAAACCGTTCTCAATCTCATAGTCTaGGAAGGCAAGTTCAGAACCTTTGTTGGTGATGAGCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: PQRANGHKTVLNLIV*EGKFRTFVGDEQFP
Trigger: GGGGAACTGCTCATCACCAACAAAGGTTCTGAACTTGCCTTCGCAGACTATGAGATTGAGAACGGTTTTGTGCCCATTTGCTCTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp GAACTTCTGATTTGCCTGCAGCTTGGACACGTAAATGTCACCAAATaGCACAATAGCCTCTACTCGGTGCTGCAGTTCGCAGTCACAGAG +
Preference number: 5 (lower is better)
Translates to: ELLICLQLGHVNVTK*HNSLYSVLQFAVTE
Trigger: CTCTGTGACTGCGAACTGCAGCACCGAGTAGAGGCTATTGTGGCATTTGGTGACATTTACGTGTCCAAGCTGCAGGCAAATCAGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp CAGAGAGATGATGGTGTGGACAATGGCCAAAGCACGCAGTGTTGGTaGCATATAACCAGTGCTCTCCTGAAGAACAAAGAACACCATCGC +
Preference number: 5 (lower is better)
Translates to: QRDDGVDNGQSTQCW*HITSALLKNKEHHR
Trigger: GCGATGGTGTTCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCACCAACACTGCGTGCTTTGGCCATTGTCCACACCATCATCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp CAAATGTCCGTACAGCTTCACGTAGGCTGTCCCTGTTTGATTTCTTaGTGCGCTCATCTAGTAATGCATATGGCACCAGGCGGGGATTTC +
Preference number: 5 (lower is better)
Translates to: QMSVQLHVGCPCLIS*CAHLVMHMAPGGDF
Trigger: GAAATCCCCGCCTGGTGCCATATGCATTACTAGATGAGCGCACCAAGAAATCAAACAGGGACAGCCTACGTGAAGCTGTACGGACATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp AACTTGAAGGTACTGGCATCTGTCCCAAGATTCATGCGGCCAATCTaGGATAGCCCCAGAGAGCAAATGGGCACAAAACCGTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: NLKVLASVPRFMRPI*DSPREQMGTKPFSI
Trigger: GATTGAGAACGGTTTTGTGCCCATTTGCTCTCTGGGGCTATCCCAGATTGGCCGCATGAATCTTGGGACAGATGCCAGTACCTTCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp ACTCTGACAGCTCTTGGCCATCATGCTGGAATAGGAAGTGTACAATaGATCATCTTCCAATTTGCTCCTCTCCGTGAGCGCGTTGCGACT +
Preference number: 5 (lower is better)
Translates to: TLTALGHHAGIGSVQ*IIFQFAPLRERVAT
Trigger: AGTCGCAACGCGCTCACGGAGAGGAGCAAATTGGAAGATGATCCATTGTACACTTCCTATTCCAGCATGATGGCCAAGAGCTGTCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGGGGCAGTTGTGCGATaGTTTCCACTGACAAACTGG +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDGAVVR*FPLTNW
Trigger: CCAGTTTGTCAGTGGAAACAATCGCACAACTGCCCC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCTGTTTGTCTTCATGTaGCATCTCGTCCTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLFVFM*HLVLWW
Trigger: CCACCAGAGGACGAGATGCAACATGAAGACAAACAG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCAGATCAGATTCTGGTaGGCTCTTACTGCAACCCCA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRQIRFW*ALTATP
Trigger: TGGGGTTGCAGTAAGAGCCAACCAGAATCTGATCTG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCAGATCAGATTCTGGTaGGCTCTTACTGCAACCCCA +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFQIRFW*ALTATP
Trigger: TGGGGTTGCAGTAAGAGCCAACCAGAATCTGATCTG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCATCCCCTGCACAGGTaGTCCATTGATTCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHHPLHR*SIDSER
Trigger: TCTTTCCGAATCAATGGACAACCTGTGCAGGGGATG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGGGATGAAAGAGGCTaGGGAGAGGAACTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSWDERG*GEELCG
Trigger: ACCACACAGTTCCTCTCCCAAGCCTCTTTCATCCCA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCAGCCGAGTTCTATTTaGTTCATCCCCCAAAGCTCG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRQPSSI*FIPQSS
Trigger: CGAGCTTTGGGGGATGAACAAAATAGAACTCGGCTG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCAGTTTCAGGGAGCTTaGAAAACTCCACAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRQFQGA*KTPQGR
Trigger: CCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACTG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTCAAACACGAAGGCTaGATCATCAGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFKHEG*IISPQL
Trigger: GAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAAAATACCCACTGCCTaGATGCCAACGCTGACCCCT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSKIPTA*MPTLTP
Trigger: AGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGGACAACATGCCCATaGCCAGATCTAGAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRTTCP*PDLEGS
Trigger: GCTGCCTTCTAGATCTGGCAATGGGCATGTTGTCCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTCCTCTCCTTAGCATaGGCCAGGTGGATGCTAATG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFLSLA*ARWMLM
Trigger: CATTAGCATCCACCTGGCCAATGCTAAGGAGAGGAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGTCTGCAGCAAGCCTTaGACTGGAGCCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKVCSKP*TGASLQ
Trigger: CTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGAC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGTGAGCGGAACTCTCTaGTCTTTCTGGCAGTTAGGG +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSVSGTL*SFWQLG
Trigger: CCCTAACTGCCAGAAAGACAAGAGAGTTCCGCTCAC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGGGCCCAGCGGATCATaGTCTGTGAAACTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSGPSGS*SVKLVP
Trigger: AGGAACTAGTTTCACAGACAATGATCCGCTGGGCCC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGGGCCCAGCGGATCATaGTCTGTGAAACTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDGPSGS*SVKLVP
Trigger: AGGAACTAGTTTCACAGACAATGATCCGCTGGGCCC...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTCCCCTTTCCCTGTTaGGATGAGATGCATTTCGGG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFPFPC*DEMHFG
Trigger: CCCGAAATGCATCTCATCCAAACAGGGAAAGGGGAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGGTCAGGGCAGAAGTaGGCCGCCATGTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSWSGQK*AAMSGS
Trigger: CGAGCCAGACATGGCGGCCAACTTCTGCCCTGACCA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGGTCAGGGCAGAAGTaGGCCGCCATGTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKWSGQK*AAMSGS
Trigger: CGAGCCAGACATGGCGGCCAACTTCTGCCCTGACCA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAAGGCTTCTCCTTCTTaGGTCCTTTCCACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFKASPS*VLSTVQ
Trigger: CTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCTT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAAGGCTTCTCCTTCTTaGGTCCTTTCCACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHKASPS*VLSTVQ
Trigger: CTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCTT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTTCACTTGGAGGAATTaGAACAGGTCCTGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFFTWRN*NRSWAF
Trigger: GAAGGCCCAGGACCTGTTCAAATTCCTCCAAGTGAA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCGCTCCCTGGGGGTTTaGGTGTTGAAGACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSRSLGV*VLKTER
Trigger: CCTCTCAGTCTTCAACACCAAAACCCCCAGGGAGCG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGACTCGGCCAAGTCATaGATTTCCTTCATCAGGCCT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHDSAKS*ISFIRP
Trigger: AGGCCTGATGAAGGAAATCAATGACTTGGCCGAGTC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGGTCGGGCCTGGCTTaGCTGATAATTGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRSGLA*LIIGWA
Trigger: TGCCCAGCCAATTATCAGCAAAGCCAGGCCCGACCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCCTGGGTGTCCCCCTaGCCATCGGTCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSWVSP*PSVFSC
Trigger: GCAGCTGAAGACCGATGGCAAGGGGGACACCCAGGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGTCTCCTCGCCTCTTaGTCTTCTTCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSLLAS*SSSVPG
Trigger: ACCAGGAACGGAAGAAGACAAAGAGGCGAGGAGACT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGTCTCCTCGCCTCTTaGTCTTCTTCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSLLAS*SSSVPG
Trigger: ACCAGGAACGGAAGAAGACAAAGAGGCGAGGAGACT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTGAACCCTATGTCCTaGGCTGGCTCATGGAACCTC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLNPMS*AGSWNL
Trigger: GAGGTTCCATGAGCCAGCCAAGGACATAGGGTTCAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGGGTCCAACAGACTCTaGAGACGGGAATCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKGSNRL*RRESLG
Trigger: GCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACCC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCACACGCTCAATTTTCTaGGCCCCACCCATGATCTCA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRTRSIF*APPMIS
Trigger: TGAGATCATGGGTGGGGCCAAGAAAATTGAGCGTGT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCTTCCGGCCTGTCAGTaGAGTCAGATTCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFLPACQ*SQILRS
Trigger: AGATCTCAGAATCTGACTCAACTGACAGGCCGGAAG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCTTCCGGCCTGTCAGTaGAGTCAGATTCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRLPACQ*SQILRS
Trigger: AGATCTCAGAATCTGACTCAACTGACAGGCCGGAAG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCAGTACTCTCTAATGTaGGGGGTTCGTCCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSQYSLM*GVRPCR
Trigger: TCGGCAAGGACGAACCCCCAACATTAGAGAGTACTG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCCAAAGCACGCAGTGTaGGTGCCATATAACCAGTGC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSPKHAV*VPYNQC
Trigger: GCACTGGTTATATGGCACCAACACTGCGTGCTTTGG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCAGGACAGACATGGTaGTGTACCAGGCAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPGQTW*CTRQGR
Trigger: TCTACCTTGCCTGGTACACAACCATGTCTGTCCTGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp GGTGAAGTGGCAAAACAACCTGACTGGTATCTATGGGACATGGGATaGAAGAGGCTTGGGAGAGGAACTGTGTGGTACCCAATAGATCTC +
Preference number: 5 (lower is better)
Translates to: GEVAKQPDWYLWDMG*KRLGRGTVWYPIDL
Trigger: GAGATCTATTGGGTACCACACAGTTCCTCTCCCAAGCCTCTTTCATCCCATGTCCCATAGATACCAGTCAGGTTGTTTTGCCACTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp AAGATGTTTGGCCGGATGCTGGTGACATCATTAATTAGTCGTGTCTaGAGAAGCAGGTTCCTCCGGGGTAGTAGGTTGTCACAGATCAGA +
Preference number: 5 (lower is better)
Translates to: KMFGRMLVTSLISRV*RSRFLRGSRLSQIR
Trigger: TCTGATCTGTGACAACCTACTACCCCGGAGGAACCTGCTTCTGCAGACACGACTAATTAATGATGTCACCAGCATCCGGCCAAACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp CATGTTCAGGGCCTGCATGAGCTCATTGTAGCGGAACTTCTGATTTaGCTGCAGCTTGGACACGTAAATGTCACCAAATGCCACAATAGC +
Preference number: 5 (lower is better)
Translates to: HVQGLHELIVAELLI*LQLGHVNVTKCHNS
Trigger: GCTATTGTGGCATTTGGTGACATTTACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGCTACAATGAGCTCATGCAGGCCCTGAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp GCCTTTCAACATAGATGTTTTTCCCAGTCCCAAGGGAGTAGAGGCTaGACAGAATGTGGTAGCATGAAACCTGCACGTCGCTCAAGAGTA +
Preference number: 5 (lower is better)
Translates to: AFQHRCFSQSQGSRG*TECGSMKPARRSRV
Trigger: TACTCTTGAGCGACGTGCAGGTTTCATGCTACCACATTCTGTGCAGCCTCTACTCCCTTGGGACTGGGAAAAACATCTATGTTGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp TGTGGACAATGGCCAAAGCACGCAGTGTTGGTGCCATATAACCAGTaGTCTCCTGAAGAACAAAGAACACCATCGCTTCTTCCTCGTCAT +
Preference number: 5 (lower is better)
Translates to: CGQWPKHAVLVPYNQ*SPEEQRTPSLLPRH
Trigger: ATGACGAGGAAGAAGCGATGGTGTTCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCACCAACACTGCGTGCTTTGGCCATTGTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp TTGAACATCATCCTCACCAGTTCCGCATCCTGGATTTGGTTCTCCTaGGCCCAGCGGATCATTGTCTGTGAAACTAGTTCCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LNIILTSSASWIWFS*AQRIIVCETSSFSV
Trigger: AACACTGAAGGAACTAGTTTCACAGACAATGATCCGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAACTGGTGAGGATGATGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp CATTTGAGAGATCCAGAGGGGCGGGGCTGTAACTATTGCCCTGATTaGTCTGGGACACACATCGAAGCTTCTCATTCTCTCTTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: HLRDPEGRGCNYCPD*SGTHIEASHSLFVE
Trigger: TTCAACAAAGAGAGAATGAGAAGCTTCGATGTGTGTCCCAGACCAATCAGGGCAATAGTTACAGCCCCGCCCCTCTGGATCTCTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp ATTCCTCAGAACGTCCTTGTAGAGGTTCAGTTGCCATTTCACAGCTaGGTCATCAGACTTCTCCTGCAGGTGCAGGTTATTCCGAAGATG +
Preference number: 5 (lower is better)
Translates to: IPQNVLVEVQLPFHS*VIRLLLQVQVIPKM
Trigger: CATCTTCGGAATAACCTGCACCTGCAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAACTGAACCTCTACAAGGACGTTCTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp GACCAGAGAGATGATGGTGTGGACAATGGCCAAAGCACGCAGTGTTaGTGCCATATAACCAGTGCTCTCCTGAAGAACAAAGAACACCAT +
Preference number: 5 (lower is better)
Translates to: DQRDDGVDNGQSTQC*CHITSALLKNKEHH
Trigger: ATGGTGTTCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCACCAACACTGCGTGCTTTGGCCATTGTCCACACCATCATCTCTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTATCTGTCTGGGATCTaGACGTGGTCAAGCACGTTA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRYLSGI*TWSSTL
Trigger: TAACGTGCTTGACCACGTCAAGATCCCAGACAGATA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATACAGAATCCCCGTACTaGATTTCTGGAACTCCCATG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHTESPY*ISGTPM
Trigger: CATGGGAGTTCCAGAAATCAAGTACGGGGATTCTGT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGAAGTTTTGGCATCTaGTGCTTTGTAGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHGSFGI*CFVGDP
Trigger: TGGGTCACCTACAAAGCACAAGATGCCAAAACTTCC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGGGAGATGATAGACTaGATGTGGCCCTCTGCTATT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHREMID*MWPSAI
Trigger: AATAGCAGAGGGCCACATCAAGTCTATCATCTCCCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCAGATCAGATTCTGGTaGGCTCTTACTGCAACCCCA +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDQIRFW*ALTATP
Trigger: TGGGGTTGCAGTAAGAGCCAACCAGAATCTGATCTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCATCCCCTGCACAGGTaGTCCATTGATTCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSHPLHR*SIDSER
Trigger: TCTTTCCGAATCAATGGACAACCTGTGCAGGGGATG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCAGTTTCAGGGAGCTTaGAAAACTCCACAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDQFQGA*KTPQGR
Trigger: CCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACTG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCGGAAAAACCGGATCTaGTCTATGCTGACCTTCTCG +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRKNRI*SMLTFS
Trigger: CGAGAAGGTCAGCATAGACAAGATCCGGTTTTTCCG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAGTTCAGAACCTTTGTaGGTGATGAGCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSSEPL*VMSSSP
Trigger: TGGGGAACTGCTCATCACCAACAAAGGTTCTGAACT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTGCAAGTTCAGAACCTTaGTTGGTGATGAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFASSEP*LVMSSS
Trigger: GGAACTGCTCATCACCAACAAAGGTTCTGAACTTGC...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGCAAGTTCAGAACCTTaGTTGGTGATGAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRASSEP*LVMSSS
Trigger: GGAACTGCTCATCACCAACAAAGGTTCTGAACTTGC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGTCTTGTGGGTCACCTaGAGGCATGGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSVLWVT*RHGGLS
Trigger: GGACAGCCCTCCATGCCTCAAGGTGACCCACAAGAC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATGTGTGCCGAAGGTCTaGTGGGTCACCTTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKCVPKV*WVTLRH
Trigger: ATGCCTCAAGGTGACCCACAAGACCTTCGGCACACA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTACATTGCTCCGACTaGATCTTTGGGAACTGGCTA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLHCSD*IFGNWL
Trigger: TAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTCCAGGTCTACATaGCTCCGACTTGATCTTTGG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRISRST*LRLDLW
Trigger: CCAAAGATCAAGTCGGAGCAATGTAGACCTGGAGAT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCGCTCTGTCTCCACTTaGAGGAAGCTGCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSRSVST*RKLLGI
Trigger: AATGCCCAGCAGCTTCCTCAAAGTGGAGACAGAGCG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTCCTCTCCTTAGCATaGGCCAGGTGGATGCTAATG +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFLSLA*ARWMLM
Trigger: CATTAGCATCCACCTGGCCAATGCTAAGGAGAGGAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTCCTCTCCTTAGCATaGGCCAGGTGGATGCTAATG +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFLSLA*ARWMLM
Trigger: CATTAGCATCCACCTGGCCAATGCTAAGGAGAGGAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAACCTGAAGCCTGGCTaGAGGCATGTCCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKNLKPG*RHVLRP
Trigger: GGGCCTGAGGACATGCCTCAAGCCAGGCTTCAGGTT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAACCTGAAGCCTGGCTaGAGGCATGTCCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVNLKPG*RHVLRP
Trigger: GGGCCTGAGGACATGCCTCAAGCCAGGCTTCAGGTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAACCTGAAGCCTGGCTaGAGGCATGTCCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSNLKPG*RHVLRP
Trigger: GGGCCTGAGGACATGCCTCAAGCCAGGCTTCAGGTT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCGCACATCTGCAGCTaGACAGACTCAGGCAATCGG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSHICS*TDSGNR
Trigger: CCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTCCGCATCCTGGATTaGGTTCTCCTGGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFRILD*VLLGPA
Trigger: CGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTCCGCATCCTGGATTaGGTTCTCCTGGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFRILD*VLLGPA
Trigger: CGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCATGGCCTTCTGATTTaGCCGGCTAATTCGACAGAA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHHGLLI*PANSTE
Trigger: TTCTGTCGAATTAGCCGGCAAAATCAGAAGGCCATG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCCAGGTCATATTTCTaGTGGGAGAGGGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSRSYF*WERESK
Trigger: CTTTGACTCCCTCTCCCACAAGAAATATGACCTGGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCCTGGGTGTCCCCCTaGCCATCGGTCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKISWVSP*PSVFSC
Trigger: GCAGCTGAAGACCGATGGCAAGGGGGACACCCAGGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCAGGATCTGGGCTTTaGAGCCAGTTAGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSGSGL*SQLDLL
Trigger: CAACAGATCTAACTGGCTCAAAAGCCCAGATCCTGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGGATCATCTTCCAATTaGCTCCTCTCCGTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKGSSSN*LLSVSA
Trigger: CGCGCTCACGGAGAGGAGCAAATTGGAAGATGATCC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCACACGCTCAATTTTCTaGGCCCCACCCATGATCTCA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSTRSIF*APPMIS
Trigger: TGAGATCATGGGTGGGGCCAAGAAAATTGAGCGTGT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAAGCCACCTTCTTTCTaGGAGTGGATTCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHKPPSF*EWIPKR
Trigger: CCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCTT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCATGTCTTCCCGTACTaGCTCCTGCTGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSHVFPY*LLLVPQ
Trigger: CTGCGGGACCAGCAGGAGCAAGTACGGGAAGACATG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCATGTCTTCCCGTACTaGCTCCTGCTGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKHVFPY*LLLVPQ
Trigger: CTGCGGGACCAGCAGGAGCAAGTACGGGAAGACATG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CTCCGCCATTTTCAACGGTGTTGGCAAGCATTTCTTGCAGTGCTCTaGCAGATAAGGACTGTTCCAGCACGAAATTGCAGACACAGAGAT +
Preference number: 5 (lower is better)
Translates to: LRHFQRCWQAFLAVL*QIRTVPARNCRHRD
Trigger: ATCTCTGTGTCTGCAATTTCGTGCTGGAACAGTCCTTATCTGTCAGAGCACTGCAAGAAATGCTTGCCAACACCGTTGAAAATGGCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208135.2
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp ACTTCTGCCCTGTCAGTTTCTATTACATCATCATGGATCCCAAACTaGGTGGGGTCGGGCATGTCACCTAGGATCTTAGTCACTCTGATG +
Preference number: 5 (lower is better)
Translates to: TSALSVSITSSWIPN*VGSGMSPRILVTLM
Trigger: CATCAGAGTGACTAAGATCCTAGGTGACATGCCCGACCCCACTCAGTTTGGGATCCATGATGATGTAATAGAAACTGACAGGGCAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp CTTAGGCACATTCACAAATGTTGGGAGGCGCTTGCTAAACCACACTaGAACATCTCGGTTCATATTTACCGCAAAAGGCTCAAAGCCCTC +
Preference number: 5 (lower is better)
Translates to: LRHIHKCWEALAKPH*NISVHIYRKRLKAL
Trigger: GAGGGCTTTGAGCCTTTTGCGGTAAATATGAACCGAGATGTTGCAGTGTGGTTTAGCAAGCGCCTCCCAACATTTGTGAATGTGCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp TTCAGTTGCCATTTCACAGCTGGGTCATCAGACTTCTCCTGCAGGTaGAGGTTATTCCGAAGATGTTCCTTGACTTCTTCATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: FSCHFTAGSSDFSCR*RLFRRCSLTSSSVS
Trigger: GGACACTGATGAAGAAGTCAAGGAACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp TACAAAGTGGACCAGCTCAGTGGTGACACCTGGCTCAGTCACTTCTaGCCTGTCAGTTTCTATTACATCATCATGGATCCCAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: YKVDQLSGDTWLSHF*PVSFYYIIMDPKLS
Trigger: ACTCAGTTTGGGATCCATGATGATGTAATAGAAACTGACAGGGCAGAAGTGACTGAGCCAGGTGTCACCACTGAGCTGGTCCACTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp GTCAAGGGCATTTTTGTCCAAACCCAGGAGTTCAGCGATGCGCTCTaGTCCATAGAGATCTCCATACTTGTTGATCACCTTTCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: VKGIFVQTQEFSDAL*SIEISILVDHLSLH
Trigger: GTGAAGAGAAAGGTGATCAACAAGTATGGAGATCTCTATGGAGCAGAGCGCATCGCTGAACTCCTGGGTTTGGACAAAAATGCCCTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp AATCCCACTTCAGGCCCTTGCTTTAAGCCACCTTCTTTCTTGGAGTaGATTCCAAAGAGGTCTGACATGATGTCTGTATCTCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: NPTSGPCFKPPSFLE*IPKRSDMMSVSPAS
Trigger: TGAGGCAGGAGATACAGACATCATGTCAGACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCTTAAAGCAAGGGCCTGAAGTGGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGCTCCTTGTGAATGTTaGCAATGCACTGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRAPCEC*QCTGVQ
Trigger: TTGTACTCCAGTGCATTGCAAACATTCACAAGGAGC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGCTCCTTGTGAATGTTaGCAATGCACTGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHAPCEC*QCTGVQ
Trigger: TTGTACTCCAGTGCATTGCAAACATTCACAAGGAGC...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCCTTCAGACCTTTGTTaGGAAGCAGGATGTATAGTC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFPSDLC*EAGCIV
Trigger: GACTATACATCCTGCTTCCAAACAAAGGTCTGAAGG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACACAGAATCCCCGTACTaGATTTCTGGAACTCCCATG +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDTESPY*ISGTPM
Trigger: CATGGGAGTTCCAGAAATCAAGTACGGGGATTCTGT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGGGGCAGTTGTGCGATaGTTTCCACTGACAAACTGG +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSGAVVR*FPLTNW
Trigger: CCAGTTTGTCAGTGGAAACAATCGCACAACTGCCCC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGGGGCAGTTGTGCGATaGTTTCCACTGACAAACTGG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKGAVVR*FPLTNW
Trigger: CCAGTTTGTCAGTGGAAACAATCGCACAACTGCCCC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGTAGGCTATCAAGTCTaGCAGGGTCTGCAGAACCTC +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKVGYQV*QGLQNL
Trigger: GAGGTTCTGCAGACCCTGCAAGACTTGATAGCCTAC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTGCACAGGTTGTCCATaGATTCGGAAAGAAATGCTG +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFCTGCP*IRKEML
Trigger: CAGCATTTCTTTCCGAATCAATGGACAACCTGTGCA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTCAAACACGAAGGCTaGATCATCAGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFKHEG*IISPQL
Trigger: GAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTCAAACACGAAGGCTaGATCATCAGCCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSFKHEG*IISPQL
Trigger: GAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTACAGGCTGGATGGTTaGGACATCCAGCCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSYRLDG*DIQPRW
Trigger: CCACCTCGGCTGGATGTCCAAACCATCCAGCCTGTA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTACAGGCTGGATGGTTaGGACATCCAGCCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKYRLDG*DIQPRW
Trigger: CCACCTCGGCTGGATGTCCAAACCATCCAGCCTGTA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTGACTGGAGCCTCCTaGCAGGCCTTTTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLTGAS*QAFSPA
Trigger: GGCTGGAGAAAAGGCCTGCAAGGAGGCTCCAGTCAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTCTGCAGCAAGCCTTaGACTGGAGCCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKVCSKP*TGASLQ
Trigger: CTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGAC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGCGGAACTTCTGATTaGCCTGCAGCTTGGACACGT +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSGTSD*PAAWTR
Trigger: ACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCAGTACCCAGCACATaGACCATCACTTCCATCACA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSVPST*TITSIT
Trigger: TGTGATGGAAGTGATGGTCAATGTGCTGGGTACTGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCATGGCCTTCTGATTTaGCCGGCTAATTCGACAGAA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSHGLLI*PANSTE
Trigger: TTCTGTCGAATTAGCCGGCAAAATCAGAAGGCCATG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTGGTCAGGGCAGAAGTaGGCCGCCATGTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFWSGQK*AAMSGS
Trigger: CGAGCCAGACATGGCGGCCAACTTCTGCCCTGACCA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCCAGGTCATATTTCTaGTGGGAGAGGGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSRSYF*WERESK
Trigger: CTTTGACTCCCTCTCCCACAAGAAATATGACCTGGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAGTGGGAGGAGAACTTaGGCAAAGAATTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSGRRT*AKNLIS
Trigger: GGAGATCAAATTCTTTGCCAAAGTTCTCCTCCCACT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGTGGGAGGAGAACTTaGGCAAAGAATTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSGRRT*AKNLIS
Trigger: GGAGATCAAATTCTTTGCCAAAGTTCTCCTCCCACT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAAATACAGGCGGTGGTaGGTGAAGTACTGGTCGACC +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKKYRRW*VKYWST
Trigger: GGTCGACCAGTACTTCACCAACCACCGCCTGTATTT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAAATACAGGCGGTGGTaGGTGAAGTACTGGTCGACC +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSKYRRW*VKYWST
Trigger: GGTCGACCAGTACTTCACCAACCACCGCCTGTATTT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACAAGAGCGGCCAGCTaGCAGAATAGGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKITRAAS*QNRLAT
Trigger: GGTGGCCAGCCTATTCTGCAAGCTGGCCGCTCTTGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCCAAGAGCAGGACGTaGCCTTTCAACATAGATGTT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSKSRT*PFNIDV
Trigger: AACATCTATGTTGAAAGGCAACGTCCTGCTCTTGGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCCAAGAGCAGGACGTaGCCTTTCAACATAGATGTT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSKSRT*PFNIDV
Trigger: AACATCTATGTTGAAAGGCAACGTCCTGCTCTTGGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAAGACTGAGAGGGGATaGTGGCGGTTAAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVKTERG*WRLRLG
Trigger: GCCCAGCCTTAACCGCCACAATCCCCTCTCAGTCTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGACTGAGAGGGGATaGTGGCGGTTAAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSKTERG*WRLRLG
Trigger: GCCCAGCCTTAACCGCCACAATCCCCTCTCAGTCTT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGGTCGGGCCTGGCTTaGCTGATAATTGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSRSGLA*LIIGWA
Trigger: TGCCCAGCCAATTATCAGCAAAGCCAGGCCCGACCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCAGGATCTGGGCTTTaGAGCCAGTTAGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSGSGL*SQLDLL
Trigger: CAACAGATCTAACTGGCTCAAAAGCCCAGATCCTGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTTCCGAAGATGTTCCTaGACTTCTTCATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRFRRCS*TSSSVS
Trigger: GGACACTGATGAAGAAGTCAAGGAACATCTTCGGAA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTTCCGAAGATGTTCCTaGACTTCTTCATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHFRRCS*TSSSVS
Trigger: GGACACTGATGAAGAAGTCAAGGAACATCTTCGGAA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCCGTTTCCGTTGCTTaGACAACAATTTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPVSVA*TTICAI
Trigger: TATGGCACAAATTGTTGTCAAAGCAACGGAAACGGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCCGTTTCCGTTGCTTaGACAACAATTTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPVSVA*TTICAI
Trigger: TATGGCACAAATTGTTGTCAAAGCAACGGAAACGGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTCTGGGTCATATTCTTaGAAGGTGTCTGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHSGSYS*KVSELV
Trigger: AACCAGCTCAGACACCTTCAAAGAATATGACCCAGA...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAATAACACTGCCACATaGAACCCTATGTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRNNTAT*NPMSLA
Trigger: AGCCAAGGACATAGGGTTCAATGTGGCAGTGTTATT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCCCCTCCTCCTTGATTTaGTCTTCCTTTTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRPSSLI*SSFSLS
Trigger: AGACAGAGAAAAGGAAGACAAAATCAAGGAGGAGGG...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGAGTTCCACAGGTTaGCAACATCCTCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRMSSTG*QHPLSL
Trigger: AAGAGACAGAGGATGTTGCAAACCTGTGGAACTCAT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATGAGTTCCACAGGTTaGCAACATCCTCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHMSSTG*QHPLSL
Trigger: AAGAGACAGAGGATGTTGCAAACCTGTGGAACTCAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAAGTCAAGGGCATTTTaGTCCAAACCCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRKSRAF*SKPRSS
Trigger: TGAACTCCTGGGTTTGGACAAAAATGCCCTTGACTT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCATGTCTTCCCGTACTaGCTCCTGCTGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIHVFPY*LLLVPQ
Trigger: CTGCGGGACCAGCAGGAGCAAGTACGGGAAGACATG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCCTGTCCTCCAGATTTaGACATCTTGCTTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHPVLQI*TSCFCC
Trigger: ACAGCAAAAGCAAGATGTCAAAATCTGGAGGACAGG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS TCA 90 bp CATCAGACTTCTCCTGCAGGTGCAGGTTATTCCGAAGATGTTCCTTaGCTTCTTCATCAGTGTCCCTACAGCTGTATCGTGATTTTGCGA +
Preference number: 5 (lower is better)
Translates to: HQTSPAGAGYSEDVP*LLHQCPYSCIVILR
Trigger: TCGCAAAATCACGATACAGCTGTAGGGACACTGATGAAGAAGTCAAGGAACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp TTAAGCCACCTTCTTTCTTGGAGTGGATTCCAAAGAGGTCTGACATaGTGTCTGTATCTCCTGCCTCACCCTTTACAAAGTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: LSHLLSWSGFQRGLT*CLYLLPHPLQSGPA
Trigger: AGCTGGTCCACTTTGTAAAGGGTGAGGCAGGAGATACAGACATCATGTCAGACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp GGCCCTCTGCTATTAGGTTTAAGGCTTCTGGGCTTTCAATCAAGATaGAGTGCAAGACCTCCAAGATACCTGAGGAAGATTCTAGTCTGT +
Preference number: 5 (lower is better)
Translates to: GPLLLGLRLLGFQSR*SARPPRYLRKILVC
Trigger: ACAGACTAGAATCTTCCTCAGGTATCTTGGAGGTCTTGCACTGCATCTTGATTGAAAGCCCAGAAGCCTTAAACCTAATAGCAGAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp TTGCCGATAATTTCAGAGAGGTCACCTAATCCCACTTCAGGCCCTTaGTTTAAGCCACCTTCTTTCTTGGAGTGGATTCCAAAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LPIISERSPNPTSGP*FKPPSFLEWIPKRS
Trigger: AGACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCTTAAAGCAAGGGCCTGAAGTGGGATTAGGTGACCTCTCTGAAATTATCGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp GTGGCATGTTCCCGCAGACCTACATCAAAGGCAAGTTTATCTGTCTaGGATCTTGACGTGGTCAAGCACGTTAGATACATTCCACTGAAA +
Preference number: 5 (lower is better)
Translates to: VACSRRPTSKASLSV*DLDVVKHVRYIPLK
Trigger: TTTCAGTGGAATGTATCTAACGTGCTTGACCACGTCAAGATCCCAGACAGATAAACTTGCCTTTGATGTAGGTCTGCGGGAACATGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp CACAACCTCTATGTGGGGATGATCCTTAGGCACATTCACAAATGTTaGGAGGCGCTTGCTAAACCACACTGCAACATCTCGGTTCATATT +
Preference number: 5 (lower is better)
Translates to: HNLYVGMILRHIHKC*EALAKPHCNISVHI
Trigger: AATATGAACCGAGATGTTGCAGTGTGGTTTAGCAAGCGCCTCCCAACATTTGTGAATGTGCCTAAGGATCATCCCCACATAGAGGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGCTCCTTGTGAATGTTaGCAATGCACTGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSAPCEC*QCTGVQ
Trigger: TTGTACTCCAGTGCATTGCAAACATTCACAAGGAGC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCTTCAGACCTTTGTTaGGAAGCAGGATGTATAGTC +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPSDLC*EAGCIV
Trigger: GACTATACATCCTGCTTCCAAACAAAGGTCTGAAGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCCTTCAGACCTTTGTTaGGAAGCAGGATGTATAGTC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSPSDLC*EAGCIV
Trigger: GACTATACATCCTGCTTCCAAACAAAGGTCTGAAGG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTCTCCTTCAGACCTTaGTTTGGAAGCAGGATGTAT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLSFRP*FGSRMY
Trigger: ATACATCCTGCTTCCAAACAAAGGTCTGAAGGAGAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCTGTTTGTCTTCATGTaGCATCTCGTCCTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLFVFM*HLVLWW
Trigger: CCACCAGAGGACGAGATGCAACATGAAGACAAACAG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCAGATCAGATTCTGGTaGGCTCTTACTGCAACCCCA +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSQIRFW*ALTATP
Trigger: TGGGGTTGCAGTAAGAGCCAACCAGAATCTGATCTG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCTCAAAGTACCACTTCTaGTACTGTGGTGAACCTTCA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRSKYHF*YCGEPS
Trigger: TGAAGGTTCACCACAGTACAAGAAGTGGTACTTTGA...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCATCACCGACACCATaGCCTCCCCATCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSSPTP*PPHPSP
Trigger: TGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCATCACCGACACCATaGCCTCCCCATCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSSPTP*PPHPSP
Trigger: TGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCATCACCGACACCATaGCCTCCCCATCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSSPTP*PPHPSP
Trigger: TGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGCACAGGTTGTCCATaGATTCGGAAAGAAATGCTG +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSCTGCP*IRKEML
Trigger: CAGCATTTCTTTCCGAATCAATGGACAACCTGTGCA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTCACGCTTATATTCTTaGACAGGCTCCAATCTCATC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFSRLYS*TGSNLI
Trigger: GATGAGATTGGAGCCTGTCAAAGAATATAAGCGTGA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACAGTTTCAGGGAGCTTaGAAAACTCCACAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKQFQGA*KTPQGR
Trigger: CCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACTG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATTCTTCAGATCCTGTaGAATACCATAGGTCCAACC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHILQIL*NTIGPT
Trigger: GGTTGGACCTATGGTATTCAACAGGATCTGAAGAAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGTGTGCCGAAGGTCTaGTGGGTCACCTTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSCVPKV*WVTLRH
Trigger: ATGCCTCAAGGTGACCCACAAGACCTTCGGCACACA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACTGCAGGGAACACTTaGGTGTTAGGCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTAGNT*VLGSTW
Trigger: CCAGGTGGAGCCTAACACCAAAGTGTTCCCTGCAGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTGCTGACAGAGGCATaGCATTCTTCAGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLLTEA*HSSVFQ
Trigger: TTGGAAAACTGAAGAATGCAATGCCTCTGTCAGCAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTGACTGGAGCCTCCTaGCAGGCCTTTTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTLTGAS*QAFSPA
Trigger: GGCTGGAGAAAAGGCCTGCAAGGAGGCTCCAGTCAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCGCACATCTGCAGCTaGACAGACTCAGGCAATCGG +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSHICS*TDSGNR
Trigger: CCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTCCGCATCCTGGATTaGGTTCTCCTGGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFFRILD*VLLGPA
Trigger: CGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGTGCTAGTTCATTATaGTCCATCACAGAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSASSL*SITEEA
Trigger: AGCCTCCTCTGTGATGGACAATAATGAACTAGCACT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACGTCTGATGAGCAGTTaGACCACAACGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRLMSS*TTTLAF
Trigger: AAATGCCAGCGTTGTGGTCAAACTGCTCATCAGACG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATTCCCCTTTCCCTGTTaGGATGAGATGCATTTCGGG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKFPFPC*DEMHFG
Trigger: CCCGAAATGCATCTCATCCAAACAGGGAAAGGGGAA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTTCCCCTTTCCCTGTTaGGATGAGATGCATTTCGGG +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSFPFPC*DEMHFG
Trigger: CCCGAAATGCATCTCATCCAAACAGGGAAAGGGGAA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGTGAGGGAGCGTCCTTaGGAAAGCCTGTATATTGTC +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKVRERP*ESLYIV
Trigger: GACAATATACAGGCTTTCCAAAGGACGCTCCCTCAC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGTGAGGGAGCGTCCTTaGGAAAGCCTGTATATTGTC +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSVRERP*ESLYIV
Trigger: GACAATATACAGGCTTTCCAAAGGACGCTCCCTCAC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAAGGCTTCTCCTTCTTaGGTCCTTTCCACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSKASPS*VLSTVQ
Trigger: CTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCTT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAAGGCTTCTCCTTCTTaGGTCCTTTCCACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKKASPS*VLSTVQ
Trigger: CTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCTT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGTGGGAGGAGAACTTaGGCAAAGAATTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSGRRT*AKNLIS
Trigger: GGAGATCAAATTCTTTGCCAAAGTTCTCCTCCCACT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGTGGGAGGAGAACTTaGGCAAAGAATTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSGRRT*AKNLIS
Trigger: GGAGATCAAATTCTTTGCCAAAGTTCTCCTCCCACT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACAAGAGCGGCCAGCTaGCAGAATAGGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTRAAS*QNRLAT
Trigger: GGTGGCCAGCCTATTCTGCAAGCTGGCCGCTCTTGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACACTTCATCACTGTCCTaGTGTCAAGTGTCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDTSSLS*CQVSEL
Trigger: TAGCTCAGACACTTGACACAAGGACAGTGATGAAGT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCCAAGAGCAGGACGTaGCCTTTCAACATAGATGTT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSKSRT*PFNIDV
Trigger: AACATCTATGTTGAAAGGCAACGTCCTGCTCTTGGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCGCTCCCTGGGGGTTTaGGTGTTGAAGACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRSLGV*VLKTER
Trigger: CCTCTCAGTCTTCAACACCAAAACCCCCAGGGAGCG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATGGCTTTTGACATCTaGCTTTTGCTGTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRMAFDI*LLLSPV
Trigger: AACTGGAGACAGCAAAAGCAAGATGTCAAAAGCCAT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTATGGCTTTTGACATCTaGCTTTTGCTGTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFMAFDI*LLLSPV
Trigger: AACTGGAGACAGCAAAAGCAAGATGTCAAAAGCCAT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTTCCGAAGATGTTCCTaGACTTCTTCATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDFRRCS*TSSSVS
Trigger: GGACACTGATGAAGAAGTCAAGGAACATCTTCGGAA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTTCCGAAGATGTTCCTaGACTTCTTCATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSFRRCS*TSSSVS
Trigger: GGACACTGATGAAGAAGTCAAGGAACATCTTCGGAA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCCGTTTCCGTTGCTTaGACAACAATTTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPVSVA*TTICAI
Trigger: TATGGCACAAATTGTTGTCAAAGCAACGGAAACGGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTGAAGTGGGTCAGGTaGCCTCTCTGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKVKWVR*PLCLLF
Trigger: GAAGAGGAGACAGAGAGGCAACCTGACCCACTTCAC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTGAAGTGGGTCAGGTaGCCTCTCTGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVKWVR*PLCLLF
Trigger: GAAGAGGAGACAGAGAGGCAACCTGACCCACTTCAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTCTGGGTCATATTCTTaGAAGGTGTCTGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDSGSYS*KVSELV
Trigger: AACCAGCTCAGACACCTTCAAAGAATATGACCCAGA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAATAACACTGCCACATaGAACCCTATGTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDNNTAT*NPMSLA
Trigger: AGCCAAGGACATAGGGTTCAATGTGGCAGTGTTATT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTACACGCTCAATTTTCTaGGCCCCACCCATGATCTCA +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSTRSIF*APPMIS
Trigger: TGAGATCATGGGTGGGGCCAAGAAAATTGAGCGTGT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCTTAGATTCCTTCACTaGAGGTTTTTCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFLRFLH*RFFPLS
Trigger: ACTCAGTGGGAAAAACCTCAAGTGAAGGAATCTAAG...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCTTAGATTCCTTCACTaGAGGTTTTTCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHLRFLH*RFFPLS
Trigger: ACTCAGTGGGAAAAACCTCAAGTGAAGGAATCTAAG...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCTTCCGGCCTGTCAGTaGAGTCAGATTCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLPACQ*SQILRS
Trigger: AGATCTCAGAATCTGACTCAACTGACAGGCCGGAAG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCCCTCCTCCTTGATTTaGTCTTCCTTTTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSPSSLI*SSFSLS
Trigger: AGACAGAGAAAAGGAAGACAAAATCAAGGAGGAGGG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTAAAAGCAGGATGAAGTaGATAGCGAAGGCTACAAAC +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFKSRMK*IAKATN
Trigger: GTTTGTAGCCTTCGCTATCAACTTCATCCTGCTTTT...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCATGTCTTCCCGTACTaGCTCCTGCTGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFHVFPY*LLLVPQ
Trigger: CTGCGGGACCAGCAGGAGCAAGTACGGGAAGACATG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCCTGTCCTCCAGATTTaGACATCTTGCTTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDPVLQI*TSCFCC
Trigger: ACAGCAAAAGCAAGATGTCAAAATCTGGAGGACAGG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS GCA 90 bp TCAATGCTACTTCCTGAGCAGGTAGGATGTACGTTCCAGAGTGTTTaGATAAAGGAGGCATCCACTTGGATGCTACCATTTGATATCGAG +
Preference number: 5 (lower is better)
Translates to: SMLLPEQVGCTFQSV*IKEASTWMLPFDIE
Trigger: CTCGATATCAAATGGTAGCATCCAAGTGGATGCCTCCTTTATGCAAACACTCTGGAACGTACATCCTACCTGCTCAGGAAGTAGCATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp CGGCTAGTAATTTGTATAGCAGGTTCAGAATTTCTTTCCAGGCCATaGCACTCTCTTCCCTTACGATCCCTGCAAAGTGTGCTACACTAT +
Preference number: 5 (lower is better)
Translates to: RLVICIAGSEFLSRP*HSLPLRSLQSVLHY
Trigger: ATAGTGTAGCACACTTTGCAGGGATCGTAAGGGAAGAGAGTGGCATGGCCTGGAAAGAAATTCTGAACCTGCTATACAAATTACTAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 90 bp ATCATCTCTACATTAGTGGATGATTCTACCAGCGTGTCAACCATCTaGTTTCCGATAGTCCCATTTACCACATTTCCTTCCAGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: IISTLVDDSTSVSTI*FPIVPFTTFPSRRD
Trigger: GTCCCTCCTGGAAGGAAATGTGGTAAATGGGACTATCGGAAAGCAGATGGTTGACACGCTGGTAGAATCATCCACTAATGTAGAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGAGAAGGCTGTGGATTaGGTGTCGGATTTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIEKAVD*VSDFPR
Trigger: CCGGGGAAAATCCGACACCAAATCCACAGCCTTCTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTACAGAATCCCCGTACTaGATTTCTGGAACTCCCATG +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSTESPY*ISGTPM
Trigger: CATGGGAGTTCCAGAAATCAAGTACGGGGATTCTGT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGGAAGTTTTGGCATCTaGTGCTTTGTAGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKGSFGI*CFVGDP
Trigger: TGGGTCACCTACAAAGCACAAGATGCCAAAACTTCC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGGGCAGTTGTGCGATaGTTTCCACTGACAAACTGG +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGAVVR*FPLTNW
Trigger: CCAGTTTGTCAGTGGAAACAATCGCACAACTGCCCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAGAGCGGCTAGTAATTaGTATAGCAGGTTCAGAATT +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHRAASN*YSRFRI
Trigger: AATTCTGAACCTGCTATACAAATTACTAGCCGCTCT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTCAAAGTACCACTTCTaGTACTGTGGTGAACCTTCA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSSKYHF*YCGEPS
Trigger: TGAAGGTTCACCACAGTACAAGAAGTGGTACTTTGA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGGGATGAAAGAGGCTaGGGAGAGGAACTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKWDERG*GEELCG
Trigger: ACCACACAGTTCCTCTCCCAAGCCTCTTTCATCCCA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGGGATGAAAGAGGCTaGGGAGAGGAACTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSWDERG*GEELCG
Trigger: ACCACACAGTTCCTCTCCCAAGCCTCTTTCATCCCA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAAAATACCCACTGCCTaGATGCCAACGCTGACCCCT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVKIPTA*MPTLTP
Trigger: AGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGTTCAGAACCTTTGTaGGTGATGAGCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSSEPL*VMSSSP
Trigger: TGGGGAACTGCTCATCACCAACAAAGGTTCTGAACT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGCAAGTTCAGAACCTTaGTTGGTGATGAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSASSEP*LVMSSS
Trigger: GGAACTGCTCATCACCAACAAAGGTTCTGAACTTGC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGGACAACATGCCCATaGCCAGATCTAGAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRTTCP*PDLEGS
Trigger: GCTGCCTTCTAGATCTGGCAATGGGCATGTTGTCCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACTGCAGGGAACACTTaGGTGTTAGGCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKITAGNT*VLGSTW
Trigger: CCAGGTGGAGCCTAACACCAAAGTGTTCCCTGCAGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTACAGGCTGGATGGTTaGGACATCCAGCCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFYRLDG*DIQPRW
Trigger: CCACCTCGGCTGGATGTCCAAACCATCCAGCCTGTA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTCTGCAGCAAGCCTTaGACTGGAGCCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVCSKP*TGASLQ
Trigger: CTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCGCACATCTGCAGCTaGACAGACTCAGGCAATCGG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKISHICS*TDSGNR
Trigger: CCGATTGCCTGAGTCTGTCAAGCTGCAGATGTGCGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGCGGAACTTCTGATTaGCCTGCAGCTTGGACACGT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSGTSD*PAAWTR
Trigger: ACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGGCCCAGCGGATCATaGTCTGTGAAACTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGPSGS*SVKLVP
Trigger: AGGAACTAGTTTCACAGACAATGATCCGCTGGGCCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTTAGGGAGGGCAGTTaGAGGGGGATGCTGATGATC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFREGS*RGMLMI
Trigger: GATCATCAGCATCCCCCTCAAACTGCCCTCCCTAAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTTAGGGAGGGCAGTTaGAGGGGGATGCTGATGATC +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFREGS*RGMLMI
Trigger: GATCATCAGCATCCCCCTCAAACTGCCCTCCCTAAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGTGGAGCAGGAAAGTTaGATCTTTAATGCCATAAAC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRVEQES*IFNAIN
Trigger: GTTTATGGCATTAAAGATCAAACTTTCCTGCTCCAC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTCCAGGTCATATTTCTaGTGGGAGAGGGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSSRSYF*WERESK
Trigger: CTTTGACTCCCTCTCCCACAAGAAATATGACCTGGA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCGAATGCTCAGCATACTaGGTGACAATGTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRECSAY*VTMYSN
Trigger: ATTGGAATACATTGTCACCAAGTATGCTGAGCATTC...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAAATACAGGCGGTGGTaGGTGAAGTACTGGTCGACC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKKYRRW*VKYWST
Trigger: GGTCGACCAGTACTTCACCAACCACCGCCTGTATTT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAATACAGGCGGTGGTaGGTGAAGTACTGGTCGACC +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSKYRRW*VKYWST
Trigger: GGTCGACCAGTACTTCACCAACCACCGCCTGTATTT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAAGACTGAGAGGGGATaGTGGCGGTTAAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFKTERG*WRLRLG
Trigger: GCCCAGCCTTAACCGCCACAATCCCCTCTCAGTCTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCGCTCCCTGGGGGTTTaGGTGTTGAAGACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRSLGV*VLKTER
Trigger: CCTCTCAGTCTTCAACACCAAAACCCCCAGGGAGCG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCACATGTCCTCCACCTaGTCTGGCATCCCCAGAATA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKHMSST*SGIPRI
Trigger: TATTCTGGGGATGCCAGACAAGGTGGAGGACATGTG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGGTCGGGCCTGGCTTaGCTGATAATTGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRSGLA*LIIGWA
Trigger: TGCCCAGCCAATTATCAGCAAAGCCAGGCCCGACCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGTCTCCTCGCCTCTTaGTCTTCTTCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSLLAS*SSSVPG
Trigger: ACCAGGAACGGAAGAAGACAAAGAGGCGAGGAGACT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTGAAGTGGGTCAGGTaGCCTCTCTGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVKWVR*PLCLLF
Trigger: GAAGAGGAGACAGAGAGGCAACCTGACCCACTTCAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTGAAGTGGGTCAGGTaGCCTCTCTGTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVKWVR*PLCLLF
Trigger: GAAGAGGAGACAGAGAGGCAACCTGACCCACTTCAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTCTCCGTGAGCGCGTaGCGACTAAAATGCAGAATG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLSVSA*RLKCRM
Trigger: CATTCTGCATTTTAGTCGCAACGCGCTCACGGAGAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTCTCCGTGAGCGCGTaGCGACTAAAATGCAGAATG +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLSVSA*RLKCRM
Trigger: CATTCTGCATTTTAGTCGCAACGCGCTCACGGAGAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTGTTGCACACCAGCATaGCCTCCGTTCAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKCCTPA*PPFRMA
Trigger: TGCCATTCTGAACGGAGGCAATGCTGGTGTGCAACA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAAGACCAGAGAGGCTTaGAAAGAATCCAGCATCTTT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDKTREA*KESSIF
Trigger: AAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCTT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAAGACCAGAGAGGCTTaGAAAGAATCCAGCATCTTT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSKTREA*KESSIF
Trigger: AAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCTT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAAGAGAATTAAAAATTaGCTTGGTGACTGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRKRIKN*LGDCQS
Trigger: GCTCTGGCAGTCACCAAGCAAATTTTTAATTCTCTT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATAAGAGAATTAAAAATTaGCTTGGTGACTGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHKRIKN*LGDCQS
Trigger: GCTCTGGCAGTCACCAAGCAAATTTTTAATTCTCTT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGGTCCAACAGACTCTaGAGACGGGAATCGTTGGGC +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGSNRL*RRESLG
Trigger: GCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACCC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCCTTAGATTCCTTCACTaGAGGTTTTTCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSLRFLH*RFFPLS
Trigger: ACTCAGTGGGAAAAACCTCAAGTGAAGGAATCTAAG...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCAGTACTCTCTAATGTaGGGGGTTCGTCCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKQYSLM*GVRPCR
Trigger: TCGGCAAGGACGAACCCCCAACATTAGAGAGTACTG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAAAAGCAGGATGAAGTaGATAGCGAAGGCTACAAAC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSKSRMK*IAKATN
Trigger: GTTTGTAGCCTTCGCTATCAACTTCATCCTGCTTTT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCAAAGCACGCAGTGTaGGTGCCATATAACCAGTGC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPKHAV*VPYNQC
Trigger: GCACTGGTTATATGGCACCAACACTGCGTGCTTTGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGAAAAGATGGCGTGTaGATTACCAAGCGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGKDGV*ITKRSH
Trigger: GTGGGACCGCTTGGTAATCAACACGCCATCTTTTCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGGAAAAGATGGCGTGTaGATTACCAAGCGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKGKDGV*ITKRSH
Trigger: GTGGGACCGCTTGGTAATCAACACGCCATCTTTTCC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCCAGGACAGACATGGTaGTGTACCAGGCAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSPGQTW*CTRQGR
Trigger: TCTACCTTGCCTGGTACACAACCATGTCTGTCCTGG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGAGCTGATCTTCATATaGCTTCCGAAAGCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSELIFI*LPKAVS
Trigger: GGAGACTGCTTTCGGAAGCAATATGAAGATCAGCTC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAGAGCTGATCTTCATATaGCTTCCGAAAGCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKELIFI*LPKAVS
Trigger: GGAGACTGCTTTCGGAAGCAATATGAAGATCAGCTC...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp CGTTGGGCATATGTTCAGAGAGATTTGTCAATAACACTGCCACATTaGACCCTATGTCCTTGGCTGGCTCATGGAACCTCTCTACAAAAT +
Preference number: 5 (lower is better)
Translates to: RWAYVQRDLSITLPH*TLCPWLAHGTSLQN
Trigger: ATTTTGTAGAGAGGTTCCATGAGCCAGCCAAGGACATAGGGTTCAATGTGGCAGTGTTATTGACAAATCTCTCTGAACATATGCCCAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp TCCTCTTCCTCTTCCGGCCTGTCAGTTGAGTCAGATTCTGAGATCTaGGATGCTAATTGCATCTCAAAGATTGTATCCTCACAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SSSSSGLSVESDSEI*DANCISKIVSSQKF
Trigger: GAACTTCTGTGAGGATACAATCTTTGAGATGCAATTAGCATCTCAGATCTCAGAATCTGACTCAACTGACAGGCCGGAAGAGGAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACCTTCAGACCTTTGTTaGGAAGCAGGATGTATAGTC +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKPSDLC*EAGCIV
Trigger: GACTATACATCCTGCTTCCAAACAAAGGTCTGAAGG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACCTTGGATGCTACCATTaGATATCGAGAGATGAAGAT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDLGCYH*ISRDED
Trigger: ATCTTCATCTCTCGATATCAAATGGTAGCATCCAAG...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGAGAAGGCTGTGGATTaGGTGTCGGATTTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFEKAVD*VSDFPR
Trigger: CCGGGGAAAATCCGACACCAAATCCACAGCCTTCTC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTAGGCTATCAAGTCTaGCAGGGTCTGCAGAACCTC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVGYQV*QGLQNL
Trigger: GAGGTTCTGCAGACCCTGCAAGACTTGATAGCCTAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTGTTTGTCTTCATGTaGCATCTCGTCCTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLFVFM*HLVLWW
Trigger: CCACCAGAGGACGAGATGCAACATGAAGACAAACAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTGTTTGTCTTCATGTaGCATCTCGTCCTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLFVFM*HLVLWW
Trigger: CCACCAGAGGACGAGATGCAACATGAAGACAAACAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACAGAGCGGCTAGTAATTaGTATAGCAGGTTCAGAATT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDRAASN*YSRFRI
Trigger: AATTCTGAACCTGCTATACAAATTACTAGCCGCTCT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGAGCGGCTAGTAATTaGTATAGCAGGTTCAGAATT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRAASN*YSRFRI
Trigger: AATTCTGAACCTGCTATACAAATTACTAGCCGCTCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCAGATCAGATTCTGGTaGGCTCTTACTGCAACCCCA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKQIRFW*ALTATP
Trigger: TGGGGTTGCAGTAAGAGCCAACCAGAATCTGATCTG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACATCCCCTGCACAGGTaGTCCATTGATTCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVHPLHR*SIDSER
Trigger: TCTTTCCGAATCAATGGACAACCTGTGCAGGGGATG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTGGGATGAAAGAGGCTaGGGAGAGGAACTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIWDERG*GEELCG
Trigger: ACCACACAGTTCCTCTCCCAAGCCTCTTTCATCCCA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCAGTTTCAGGGAGCTTaGAAAACTCCACAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSQFQGA*KTPQGR
Trigger: CCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACTG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAAAATACCCACTGCCTaGATGCCAACGCTGACCCCT +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIKIPTA*MPTLTP
Trigger: AGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTACTGCAGGGAACACTTaGGTGTTAGGCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFTAGNT*VLGSTW
Trigger: CCAGGTGGAGCCTAACACCAAAGTGTTCCCTGCAGT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACTGCTGACAGAGGCATaGCATTCTTCAGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKLLTEA*HSSVFQ
Trigger: TTGGAAAACTGAAGAATGCAATGCCTCTGTCAGCAG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCGCTCTGTCTCCACTTaGAGGAAGCTGCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRSVST*RKLLGI
Trigger: AATGCCCAGCAGCTTCCTCAAAGTGGAGACAGAGCG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTTCCTCTCCTTAGCATaGGCCAGGTGGATGCTAATG +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKFLSLA*ARWMLM
Trigger: CATTAGCATCCACCTGGCCAATGCTAAGGAGAGGAA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGTGAGCGGAACTCTCTaGTCTTTCTGGCAGTTAGGG +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTVSGTL*SFWQLG
Trigger: CCCTAACTGCCAGAAAGACAAGAGAGTTCCGCTCAC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGGGCCCAGCGGATCATaGTCTGTGAAACTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTGPSGS*SVKLVP
Trigger: AGGAACTAGTTTCACAGACAATGATCCGCTGGGCCC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACGTCTGATGAGCAGTTaGACCACAACGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRLMSS*TTTLAF
Trigger: AAATGCCAGCGTTGTGGTCAAACTGCTCATCAGACG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCAATGACATAATTGCATaGCCCATATGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRNDIIA*PICTIS
Trigger: AGAGATTGTGCATATGGGCAATGCAATTATGTCATT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGTGAGGGAGCGTCCTTaGGAAAGCCTGTATATTGTC +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSVRERP*ESLYIV
Trigger: GACAATATACAGGCTTTCCAAAGGACGCTCCCTCAC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCGAATGCTCAGCATACTaGGTGACAATGTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSECSAY*VTMYSN
Trigger: ATTGGAATACATTGTCACCAAGTATGCTGAGCATTC...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGCTTCTCCTTCTTaGGTCCTTTCCACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSKASPS*VLSTVQ
Trigger: CTGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCTT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTCACTTGGAGGAATTaGAACAGGTCCTGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFTWRN*NRSWAF
Trigger: GAAGGCCCAGGACCTGTTCAAATTCCTCCAAGTGAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTTCACTTGGAGGAATTaGAACAGGTCCTGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSFTWRN*NRSWAF
Trigger: GAAGGCCCAGGACCTGTTCAAATTCCTCCAAGTGAA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAACTTCATCACTGTCCTaGTGTCAAGTGTCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKTSSLS*CQVSEL
Trigger: TAGCTCAGACACTTGACACAAGGACAGTGATGAAGT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATCCAAGAGCAGGACGTaGCCTTTCAACATAGATGTT +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKSKSRT*PFNIDV
Trigger: AACATCTATGTTGAAAGGCAACGTCCTGCTCTTGGA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACACATGTCCTCCACCTaGTCTGGCATCCCCAGAATA +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTHMSST*SGIPRI
Trigger: TATTCTGGGGATGCCAGACAAGGTGGAGGACATGTG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGACTCGGCCAAGTCATaGATTTCCTTCATCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVDSAKS*ISFIRP
Trigger: AGGCCTGATGAAGGAAATCAATGACTTGGCCGAGTC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGTCTCCTCGCCTCTTaGTCTTCTTCCGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSLLAS*SSSVPG
Trigger: ACCAGGAACGGAAGAAGACAAAGAGGCGAGGAGACT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCTGCTTTGACAACAATTaGTGCCATACAGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSCFDNN*CHTAFL
Trigger: CAAAAAGGCTGTATGGCACAAATTGTTGTCAAAGCA...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACTGCTTTGACAACAATTaGTGCCATACAGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDCFDNN*CHTAFL
Trigger: CAAAAAGGCTGTATGGCACAAATTGTTGTCAAAGCA...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGATCATCTTCCAATTaGCTCCTCTCCGTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGSSSN*LLSVSA
Trigger: CGCGCTCACGGAGAGGAGCAAATTGGAAGATGATCC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTGTTGCACACCAGCATaGCCTCCGTTCAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKICCTPA*PPFRMA
Trigger: TGCCATTCTGAACGGAGGCAATGCTGGTGTGCAACA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAAGAGAATTAAAAATTaGCTTGGTGACTGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSKRIKN*LGDCQS
Trigger: GCTCTGGCAGTCACCAAGCAAATTTTTAATTCTCTT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTTGAACCCTATGTCCTaGGCTGGCTCATGGAACCTC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKILNPMS*AGSWNL
Trigger: GAGGTTCCATGAGCCAGCCAAGGACATAGGGTTCAA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTTATGTTCAGAGAGATTaGTCAATAACACTGCCACAT +
Preference number: 5 (lower is better)
Translates to: PISPWQGSSYMTFRCSRFYVQRD*SITLPH
Trigger: ATGTGGCAGTGTTATTGACAAATCTCTCTGAACATA...AAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACACGCTCAATTTTCTaGGCCCCACCCATGATCTCA +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTRSIF*APPMIS
Trigger: TGAGATCATGGGTGGGGCCAAGAAAATTGAGCGTGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATATTGCATCTCAAAGATaGTATCCTCACAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: QSLARVLLHDVQVFKISHIASQR*YPHRSS
Trigger: TGAACTTCTGTGAGGATACAATCTTTGAGATGCAAT...ATGCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATTGCATCTCAAAGATaGTATCCTCACAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRIASQR*YPHRSS
Trigger: TGAACTTCTGTGAGGATACAATCTTTGAGATGCAAT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTTCCGGCCTGTCAGTaGAGTCAGATTCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLPACQ*SQILRS
Trigger: AGATCTCAGAATCTGACTCAACTGACAGGCCGGAAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCCCTCCTCCTTGATTTaGTCTTCCTTTTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSPSSLI*SSFSLS
Trigger: AGACAGAGAAAAGGAAGACAAAATCAAGGAGGAGGG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACCCTCCTCCTTGATTTaGTCTTCCTTTTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKPSSLI*SSFSLS
Trigger: AGACAGAGAAAAGGAAGACAAAATCAAGGAGGAGGG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGGAAAAGATGGCGTGTaGATTACCAAGCGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIGKDGV*ITKRSH
Trigger: GTGGGACCGCTTGGTAATCAACACGCCATCTTTTCC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCAGATCTCCATACTTGTaGATCACCTTTCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSRSPYL*ITFLFT
Trigger: TGTGAAGAGAAAGGTGATCAACAAGTATGGAGATCT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAAGTCAAGGGCATTTTaGTCCAAACCCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKKSRAF*SKPRSS
Trigger: TGAACTCCTGGGTTTGGACAAAAATGCCCTTGACTT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCCAGGACAGACATGGTaGTGTACCAGGCAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIPGQTW*CTRQGR
Trigger: TCTACCTTGCCTGGTACACAACCATGTCTGTCCTGG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATCAGTCCCTGGCAAGGGTCCTCTTACATGACGTTCAGGTGTTCAAGATTTCGCATCAATAATAAGACCTaGAATGATGGCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: ISPWQGSSYMTFRCSRFRINNKT*NDGQQD
Trigger: ATCTTGCTGGCCATCATTCAAGGTCTTATTATTGAT...GCGAAATCTTGAACACCTGAACGTCATGTAAGAGGACCCTTGCCAGGGACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGTTCCAGCACGAAATaGCAGACACAGAGATCTGGA +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSCSSTK*QTQRSG
Trigger: TCCAGATCTCTGTGTCTGCAATTTCGTGCTGGAACA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTACGTTCCAGAGTGTTaGCATAAAGGAGGCATCCAC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKYVPEC*HKGGIH
Trigger: GTGGATGCCTCCTTTATGCAAACACTCTGGAACGTA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACAGAATCCCCGTACTaGATTTCTGGAACTCCCATG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTESPY*ISGTPM
Trigger: CATGGGAGTTCCAGAAATCAAGTACGGGGATTCTGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGGAAGTTTTGGCATCTaGTGCTTTGTAGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVGSFGI*CFVGDP
Trigger: TGGGTCACCTACAAAGCACAAGATGCCAAAACTTCC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTGTTTGTCTTCATGTaGCATCTCGTCCTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKILFVFM*HLVLWW
Trigger: CCACCAGAGGACGAGATGCAACATGAAGACAAACAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGGGAGATGATAGACTaGATGTGGCCCTCTGCTATT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSREMID*MWPSAI
Trigger: AATAGCAGAGGGCCACATCAAGTCTATCATCTCCCT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGGGAGATGATAGACTaGATGTGGCCCTCTGCTATT +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKREMID*MWPSAI
Trigger: AATAGCAGAGGGCCACATCAAGTCTATCATCTCCCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACATCCCCTGCACAGGTaGTCCATTGATTCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTHPLHR*SIDSER
Trigger: TCTTTCCGAATCAATGGACAACCTGTGCAGGGGATG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCAGCCGAGTTCTATTTaGTTCATCCCCCAAAGCTCG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIQPSSI*FIPQSS
Trigger: CGAGCTTTGGGGGATGAACAAAATAGAACTCGGCTG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTATTCTTCAGATCCTGTaGAATACCATAGGTCCAACC +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSILQIL*NTIGPT
Trigger: GGTTGGACCTATGGTATTCAACAGGATCTGAAGAAT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCGGAAAAACCGGATCTaGTCTATGCTGACCTTCTCG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIRKNRI*SMLTFS
Trigger: CGAGAAGGTCAGCATAGACAAGATCCGGTTTTTCCG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGCAAGTTCAGAACCTTaGTTGGTGATGAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVASSEP*LVMSSS
Trigger: GGAACTGCTCATCACCAACAAAGGTTCTGAACTTGC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCTACATTGCTCCGACTaGATCTTTGGGAACTGGCTA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLHCSD*IFGNWL
Trigger: TAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTAG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACTACATTGCTCCGACTaGATCTTTGGGAACTGGCTA +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVLHCSD*IFGNWL
Trigger: TAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTAG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATCTCCAGGTCTACATaGCTCCGACTTGATCTTTGG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSISRST*LRLDLW
Trigger: CCAAAGATCAAGTCGGAGCAATGTAGACCTGGAGAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTCCTCTCCTTAGCATaGGCCAGGTGGATGCTAATG +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFLSLA*ARWMLM
Trigger: CATTAGCATCCACCTGGCCAATGCTAAGGAGAGGAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGCGGAACTTCTGATTaGCCTGCAGCTTGGACACGT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSGTSD*PAAWTR
Trigger: ACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGTGAGCGGAACTCTCTaGTCTTTCTGGCAGTTAGGG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFVSGTL*SFWQLG
Trigger: CCCTAACTGCCAGAAAGACAAGAGAGTTCCGCTCAC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCAGTACCCAGCACATaGACCATCACTTCCATCACA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSVPST*TITSIT
Trigger: TGTGATGGAAGTGATGGTCAATGTGCTGGGTACTGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCATGGCCTTCTGATTTaGCCGGCTAATTCGACAGAA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKHGLLI*PANSTE
Trigger: TTCTGTCGAATTAGCCGGCAAAATCAGAAGGCCATG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACGTCTGATGAGCAGTTaGACCACAACGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTRLMSS*TTTLAF
Trigger: AAATGCCAGCGTTGTGGTCAAACTGCTCATCAGACG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATTCCCCTTTCCCTGTTaGGATGAGATGCATTTCGGG +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTFPFPC*DEMHFG
Trigger: CCCGAAATGCATCTCATCCAAACAGGGAAAGGGGAA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGTGAGGGAGCGTCCTTaGGAAAGCCTGTATATTGTC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIVRERP*ESLYIV
Trigger: GACAATATACAGGCTTTCCAAAGGACGCTCCCTCAC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCCAGGTCATATTTCTaGTGGGAGAGGGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSRSYF*WERESK
Trigger: CTTTGACTCCCTCTCCCACAAGAAATATGACCTGGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCACATGTCCTCCACCTaGTCTGGCATCCCCAGAATA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFHMSST*SGIPRI
Trigger: TATTCTGGGGATGCCAGACAAGGTGGAGGACATGTG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGACTCGGCCAAGTCATaGATTTCCTTCATCAGGCCT +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTDSAKS*ISFIRP
Trigger: AGGCCTGATGAAGGAAATCAATGACTTGGCCGAGTC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCAGGATCTGGGCTTTaGAGCCAGTTAGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSGSGL*SQLDLL
Trigger: CAACAGATCTAACTGGCTCAAAAGCCCAGATCCTGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTCTCCGTGAGCGCGTaGCGACTAAAATGCAGAATG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLSVSA*RLKCRM
Trigger: CATTCTGCATTTTAGTCGCAACGCGCTCACGGAGAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTTGAACCCTATGTCCTaGGCTGGCTCATGGAACCTC +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLNPMS*AGSWNL
Trigger: GAGGTTCCATGAGCCAGCCAAGGACATAGGGTTCAA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACACGCTCAATTTTCTaGGCCCCACCCATGATCTCA +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKITRSIF*APPMIS
Trigger: TGAGATCATGGGTGGGGCCAAGAAAATTGAGCGTGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATTGCATCTCAAAGATaGTATCCTCACAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSIASQR*YPHRSS
Trigger: TGAACTTCTGTGAGGATACAATCTTTGAGATGCAAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTTCCGGCCTGTCAGTaGAGTCAGATTCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKILPACQ*SQILRS
Trigger: AGATCTCAGAATCTGACTCAACTGACAGGCCGGAAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAAGCCACCTTCTTTCTaGGAGTGGATTCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVKPPSF*EWIPKR
Trigger: CCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCAAAGCACGCAGTGTaGGTGCCATATAACCAGTGC +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPKHAV*VPYNQC
Trigger: GCACTGGTTATATGGCACCAACACTGCGTGCTTTGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCAGGACAGACATGGTaGTGTACCAGGCAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPGQTW*CTRQGR
Trigger: TCTACCTTGCCTGGTACACAACCATGTCTGTCCTGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATGATTTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGTCCTCTTACATGACATCAATAATAAGACCTaGAATGATGGCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: MILCSSAHQSLARVLLHDINNKT*NDGQQD
Trigger: ATCTTGCTGGCCATCATTCAAGGTCTTATTATTGAT...GTCATGTAAGAGGACCCTTGCCAGGGACTGATGGGCAGAACTACACAAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AATGACGTGAATAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAGGAGCAGCATCAATAATAAGACCTaGAATGATGGCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: NDVNNLQVQCHDVRQRSSINNKT*NDGQQD
Trigger: ATCTTGCTGGCCATCATTCAAGGTCTTATTATTGAT...GCTGCTCCTCTGTCTTACGTCATGACACTGCACTTGCAGGTTATTCACGTCATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGAGCTGATCTTCATATaGCTTCCGAAAGCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKELIFI*LPKAVS
Trigger: GGAGACTGCTTTCGGAAGCAATATGAAGATCAGCTC...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAACCAGATTTTGACATCTaGCTTTTGCTGTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKPDFDI*LLLSPV
Trigger: AACTGGAGACAGCAAAAGCAAGATGTCAAAATCTGG...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080673.13
ENSMUST00000208151.2
CDS TCA 90 bp TCGATCTCTGACTGTGTATATTGCTTTAGACCTTCCATGGCCTTCTaGAATTCTTTTCGAGAGATGATCCCTTTGCCATCTGGGTCATAT +
Preference number: 5 (lower is better)
Translates to: SISDCVYCFRPSMAF*NSFREMIPLPSGSY
Trigger: ATATGACCCAGATGGCAAAGGGATCATCTCTCGAAAAGAATTTCAGAAGGCCATGGAAGGTCTAAAGCAATATACACAGTCAGAGATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 90 bp TTCATAGAACACCCTCCTGTGCTGAGAATCATTCTGATCTGTAGATaGTATCGTCAAACATTCATCATGACCGTGGAAAAGACGAACTAC +
Preference number: 5 (lower is better)
Translates to: FIEHPPVLRIILICR*YRQTFIMTVEKTNY
Trigger: GTAGTTCGTCTTTTCCACGGTCATGATGAATGTTTGACGATACCATCTACAGATCAGAATGATTCTCAGCACAGGAGGGTGTTCTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGCTCCTTGTGAATGTTaGCAATGCACTGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSAPCEC*QCTGVQ
Trigger: TTGTACTCCAGTGCATTGCAAACATTCACAAGGAGC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTATCTGTCTGGGATCTaGACGTGGTCAAGCACGTTA +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIYLSGI*TWSSTL
Trigger: TAACGTGCTTGACCACGTCAAGATCCCAGACAGATA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATATCTGTCTGGGATCTaGACGTGGTCAAGCACGTTA +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTYLSGI*TWSSTL
Trigger: TAACGTGCTTGACCACGTCAAGATCCCAGACAGATA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACCTTCAGACCTTTGTTaGGAAGCAGGATGTATAGTC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVPSDLC*EAGCIV
Trigger: GACTATACATCCTGCTTCCAAACAAAGGTCTGAAGG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTCTCCTTCAGACCTTaGTTTGGAAGCAGGATGTAT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLSFRP*FGSRMY
Trigger: ATACATCCTGCTTCCAAACAAAGGTCTGAAGGAGAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCTCTCCTTCAGACCTTaGTTTGGAAGCAGGATGTAT +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLSFRP*FGSRMY
Trigger: ATACATCCTGCTTCCAAACAAAGGTCTGAAGGAGAG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTCTTGGATGCTACCATTaGATATCGAGAGATGAAGAT +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSLGCYH*ISRDED
Trigger: ATCTTCATCTCTCGATATCAAATGGTAGCATCCAAG...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTACGTTCCAGAGTGTTaGCATAAAGGAGGCATCCAC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIYVPEC*HKGGIH
Trigger: GTGGATGCCTCCTTTATGCAAACACTCTGGAACGTA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTACAGAATCCCCGTACTaGATTTCTGGAACTCCCATG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKITESPY*ISGTPM
Trigger: CATGGGAGTTCCAGAAATCAAGTACGGGGATTCTGT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAAGAGCGGCTAGTAATTaGTATAGCAGGTTCAGAATT +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKRAASN*YSRFRI
Trigger: AATTCTGAACCTGCTATACAAATTACTAGCCGCTCT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGGGAGATGATAGACTaGATGTGGCCCTCTGCTATT +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTREMID*MWPSAI
Trigger: AATAGCAGAGGGCCACATCAAGTCTATCATCTCCCT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGCACAGGTTGTCCATaGATTCGGAAAGAAATGCTG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSCTGCP*IRKEML
Trigger: CAGCATTTCTTTCCGAATCAATGGACAACCTGTGCA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCGGAAAAACCGGATCTaGTCTATGCTGACCTTCTCG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRKNRI*SMLTFS
Trigger: CGAGAAGGTCAGCATAGACAAGATCCGGTTTTTCCG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGTTCAGAACCTTTGTaGGTGATGAGCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSSEPL*VMSSSP
Trigger: TGGGGAACTGCTCATCACCAACAAAGGTTCTGAACT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTATCTCCAGGTCTACATaGCTCCGACTTGATCTTTGG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIISRST*LRLDLW
Trigger: CCAAAGATCAAGTCGGAGCAATGTAGACCTGGAGAT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCTGCTGACAGAGGCATaGCATTCTTCAGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKLLTEA*HSSVFQ
Trigger: TTGGAAAACTGAAGAATGCAATGCCTCTGTCAGCAG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCAGTACCCAGCACATaGACCATCACTTCCATCACA +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSVPST*TITSIT
Trigger: TGTGATGGAAGTGATGGTCAATGTGCTGGGTACTGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACACATGGCCTTCTGATTTaGCCGGCTAATTCGACAGAA +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTHGLLI*PANSTE
Trigger: TTCTGTCGAATTAGCCGGCAAAATCAGAAGGCCATG...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAGTGCTAGTTCATTATaGTCCATCACAGAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSASSL*SITEEA
Trigger: AGCCTCCTCTGTGATGGACAATAATGAACTAGCACT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCGTCTGATGAGCAGTTaGACCACAACGCTGGCATTT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRLMSS*TTTLAF
Trigger: AAATGCCAGCGTTGTGGTCAAACTGCTCATCAGACG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGTGGAGCAGGAAAGTTaGATCTTTAATGCCATAAAC +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSVEQES*IFNAIN
Trigger: GTTTATGGCATTAAAGATCAAACTTTCCTGCTCCAC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATCCAGGTCATATTTCTaGTGGGAGAGGGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSRSYF*WERESK
Trigger: CTTTGACTCCCTCTCCCACAAGAAATATGACCTGGA...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTGAATGCTCAGCATACTaGGTGACAATGTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSECSAY*VTMYSN
Trigger: ATTGGAATACATTGTCACCAAGTATGCTGAGCATTC...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGACTTCATCACTGTCCTaGTGTCAAGTGTCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSTSSLS*CQVSEL
Trigger: TAGCTCAGACACTTGACACAAGGACAGTGATGAAGT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGACTTCATCACTGTCCTaGTGTCAAGTGTCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKTSSLS*CQVSEL
Trigger: TAGCTCAGACACTTGACACAAGGACAGTGATGAAGT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTCCAAGAGCAGGACGTaGCCTTTCAACATAGATGTT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSSKSRT*PFNIDV
Trigger: AACATCTATGTTGAAAGGCAACGTCCTGCTCTTGGA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGACTCGGCCAAGTCATaGATTTCCTTCATCAGGCCT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFDSAKS*ISFIRP
Trigger: AGGCCTGATGAAGGAAATCAATGACTTGGCCGAGTC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCAGGATCTGGGCTTTaGAGCCAGTTAGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKISGSGL*SQLDLL
Trigger: CAACAGATCTAACTGGCTCAAAAGCCCAGATCCTGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATTCCGAAGATGTTCCTaGACTTCTTCATCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVFRRCS*TSSSVS
Trigger: GGACACTGATGAAGAAGTCAAGGAACATCTTCGGAA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATGCTTTGACAACAATTaGTGCCATACAGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKCFDNN*CHTAFL
Trigger: CAAAAAGGCTGTATGGCACAAATTGTTGTCAAAGCA...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTTGCTTTGACAACAATTaGTGCCATACAGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSCFDNN*CHTAFL
Trigger: CAAAAAGGCTGTATGGCACAAATTGTTGTCAAAGCA...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACCCGTTTCCGTTGCTTaGACAACAATTTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVPVSVA*TTICAI
Trigger: TATGGCACAAATTGTTGTCAAAGCAACGGAAACGGG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCTGGGTCATATTCTTaGAAGGTGTCTGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSGSYS*KVSELV
Trigger: AACCAGCTCAGACACCTTCAAAGAATATGACCCAGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGTCTGGGTCATATTCTTaGAAGGTGTCTGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKSGSYS*KVSELV
Trigger: AACCAGCTCAGACACCTTCAAAGAATATGACCCAGA...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAATAACACTGCCACATaGAACCCTATGTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSNNTAT*NPMSLA
Trigger: AGCCAAGGACATAGGGTTCAATGTGGCAGTGTTATT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAATAACACTGCCACATaGAACCCTATGTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKNNTAT*NPMSLA
Trigger: AGCCAAGGACATAGGGTTCAATGTGGCAGTGTTATT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAATAACACTGCCACATaGAACCCTATGTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVNNTAT*NPMSLA
Trigger: AGCCAAGGACATAGGGTTCAATGTGGCAGTGTTATT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAAGCCACCTTCTTTCTaGGAGTGGATTCCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIKPPSF*EWIPKR
Trigger: CCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGCTT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATGAGTTCCACAGGTTaGCAACATCCTCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSMSSTG*QHPLSL
Trigger: AAGAGACAGAGGATGTTGCAAACCTGTGGAACTCAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATGAGTTCCACAGGTTaGCAACATCCTCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKMSSTG*QHPLSL
Trigger: AAGAGACAGAGGATGTTGCAAACCTGTGGAACTCAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAAGTCAAGGGCATTTTaGTCCAAACCCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKKSRAF*SKPRSS
Trigger: TGAACTCCTGGGTTTGGACAAAAATGCCCTTGACTT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAAGTCAAGGGCATTTTaGTCCAAACCCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVKSRAF*SKPRSS
Trigger: TGAACTCCTGGGTTTGGACAAAAATGCCCTTGACTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAGAGCTGATCTTCATATaGCTTCCGAAAGCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTELIFI*LPKAVS
Trigger: GGAGACTGCTTTCGGAAGCAATATGAAGATCAGCTC...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGAGCTGATCTTCATATaGCTTCCGAAAGCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIELIFI*LPKAVS
Trigger: GGAGACTGCTTTCGGAAGCAATATGAAGATCAGCTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp TACCACTTCAAATTCAAAGTACCACTTTCCAGACTTTACAGCATATaGCCGTTCTACTCGGAAAAACCGGATCTTGTCTATGCTGACCTT +
Preference number: 5 (lower is better)
Translates to: YHFKFKVPLSRLYSI*PFYSEKPDLVYADL
Trigger: AAGGTCAGCATAGACAAGATCCGGTTTTTCCGAGTAGAACGGTCATATGCTGTAAAGTCTGGAAAGTGGTACTTTGAATTTGAAGTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTATCTGTCTGGGATCTaGACGTGGTCAAGCACGTTA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFYLSGI*TWSSTL
Trigger: TAACGTGCTTGACCACGTCAAGATCCCAGACAGATA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTCTCCTTCAGACCTTaGTTTGGAAGCAGGATGTAT +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKILSFRP*FGSRMY
Trigger: ATACATCCTGCTTCCAAACAAAGGTCTGAAGGAGAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGGAAGTTTTGGCATCTaGTGCTTTGTAGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFGSFGI*CFVGDP
Trigger: TGGGTCACCTACAAAGCACAAGATGCCAAAACTTCC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCAAAGTACCACTTCTaGTACTGTGGTGAACCTTCA +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSKYHF*YCGEPS
Trigger: TGAAGGTTCACCACAGTACAAGAAGTGGTACTTTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTGCACAGGTTGTCCATaGATTCGGAAAGAAATGCTG +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKICTGCP*IRKEML
Trigger: CAGCATTTCTTTCCGAATCAATGGACAACCTGTGCA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATCACGCTTATATTCTTaGACAGGCTCCAATCTCATC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVSRLYS*TGSNLI
Trigger: GATGAGATTGGAGCCTGTCAAAGAATATAAGCGTGA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGATTCTTCAGATCCTGTaGAATACCATAGGTCCAACC +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKILQIL*NTIGPT
Trigger: GGTTGGACCTATGGTATTCAACAGGATCTGAAGAAT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAATTCTTCAGATCCTGTaGAATACCATAGGTCCAACC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVILQIL*NTIGPT
Trigger: GGTTGGACCTATGGTATTCAACAGGATCTGAAGAAT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTACATTGCTCCGACTaGATCTTTGGGAACTGGCTA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLHCSD*IFGNWL
Trigger: TAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCTGCTGACAGAGGCATaGCATTCTTCAGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKILLTEA*HSSVFQ
Trigger: TTGGAAAACTGAAGAATGCAATGCCTCTGTCAGCAG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCAGTACCCAGCACATaGACCATCACTTCCATCACA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSVPST*TITSIT
Trigger: TGTGATGGAAGTGATGGTCAATGTGCTGGGTACTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCATGGCCTTCTGATTTaGCCGGCTAATTCGACAGAA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFHGLLI*PANSTE
Trigger: TTCTGTCGAATTAGCCGGCAAAATCAGAAGGCCATG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAGTGCTAGTTCATTATaGTCCATCACAGAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTSASSL*SITEEA
Trigger: AGCCTCCTCTGTGATGGACAATAATGAACTAGCACT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CCTAAAACATGGCAGCTCCACTACTTACATGGGACCATATTGCATCACTCAAGTAATGACATAATTGCATaGCCCATATGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: PKTWQLHYLHGTILHHSSNDIIA*PICTIS
Trigger: AGAGATTGTGCATATGGGCAATGCAATTATGTCATT...ACTTGAGTGATGCAATATGGTCCCATGTAAGTAGTGGAGCTGCCATGTTTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGTGGGAGGAGAACTTaGGCAAAGAATTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKISGRRT*AKNLIS
Trigger: GGAGATCAAATTCTTTGCCAAAGTTCTCCTCCCACT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCAGGATCTGGGCTTTaGAGCCAGTTAGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSGSGL*SQLDLL
Trigger: CAACAGATCTAACTGGCTCAAAAGCCCAGATCCTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAAGACCAGAGAGGCTTaGAAAGAATCCAGCATCTTT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVKTREA*KESSIF
Trigger: AAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCTT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGCTTAGATTCCTTCACTaGAGGTTTTTCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSLRFLH*RFFPLS
Trigger: ACTCAGTGGGAAAAACCTCAAGTGAAGGAATCTAAG...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CAGTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAAATTGCATCTCAAAGATaGTATCCTCACAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: QYSAFLQITAGDKLLLKKIASQR*YPHRSS
Trigger: TGAACTTCTGTGAGGATACAATCTTTGAGATGCAAT...TTTCTTCAGTAACAGCTTGTCACCTGCTGTTATCTGGAGAAAGGCACTGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTCCCTCCTCCTTGATTTaGTCTTCCTTTTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIPSSLI*SSFSLS
Trigger: AGACAGAGAAAAGGAAGACAAAATCAAGGAGGAGGG...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTACCAGATTTTGACATCTaGCTTTTGCTGTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVPDFDI*LLLSPV
Trigger: AACTGGAGACAGCAAAAGCAAGATGTCAAAATCTGG...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGCCAGATTTTGACATCTaGCTTTTGCTGTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKPDFDI*LLLSPV
Trigger: AACTGGAGACAGCAAAAGCAAGATGTCAAAATCTGG...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTCAAAGTACCACTTCTaGTACTGTGGTGAACCTTCA +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKISKYHF*YCGEPS
Trigger: TGAAGGTTCACCACAGTACAAGAAGTGGTACTTTGA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTGCACAGGTTGTCCATaGATTCGGAAAGAAATGCTG +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFCTGCP*IRKEML
Trigger: CAGCATTTCTTTCCGAATCAATGGACAACCTGTGCA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAATTCTTCAGATCCTGTaGAATACCATAGGTCCAACC +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTILQIL*NTIGPT
Trigger: GGTTGGACCTATGGTATTCAACAGGATCTGAAGAAT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTGCTGACAGAGGCATaGCATTCTTCAGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLLTEA*HSSVFQ
Trigger: TTGGAAAACTGAAGAATGCAATGCCTCTGTCAGCAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAGTGGAGCAGGAAAGTTaGATCTTTAATGCCATAAAC +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVVEQES*IFNAIN
Trigger: GTTTATGGCATTAAAGATCAAACTTTCCTGCTCCAC...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGGTGGAGCAGGAAAGTTaGATCTTTAATGCCATAAAC +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSVEQES*IFNAIN
Trigger: GTTTATGGCATTAAAGATCAAACTTTCCTGCTCCAC...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGTGCTTTGACAACAATTaGTGCCATACAGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSCFDNN*CHTAFL
Trigger: CAAAAAGGCTGTATGGCACAAATTGTTGTCAAAGCA...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCCGTTTCCGTTGCTTaGACAACAATTTGTGCCATA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPVSVA*TTICAI
Trigger: TATGGCACAAATTGTTGTCAAAGCAACGGAAACGGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCTGGGTCATATTCTTaGAAGGTGTCTGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSGSYS*KVSELV
Trigger: AACCAGCTCAGACACCTTCAAAGAATATGACCCAGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp ATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACAAAAAGCAGGATGAAGTaGATAGCGAAGGCTACAAAC +
Preference number: 5 (lower is better)
Translates to: ILETVTSKYHGKIRSKVTKSRMK*IAKATN
Trigger: GTTTGTAGCCTTCGCTATCAACTTCATCCTGCTTTT...TGTTACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGAGATCTCCATACTTGTaGATCACCTTTCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: KLILETVTSKYHGKIRSKRSPYL*ITFLFT
Trigger: TGTGAAGAGAAAGGTGATCAACAAGTATGGAGATCT...CTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAAGATCTCCATACTTGTaGATCACCTTTCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVRSPYL*ITFLFT
Trigger: TGTGAAGAGAAAGGTGATCAACAAGTATGGAGATCT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAAGTCAAGGGCATTTTaGTCCAAACCCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFKSRAF*SKPRSS
Trigger: TGAACTCCTGGGTTTGGACAAAAATGCCCTTGACTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCCTGTCCTCCAGATTTaGACATCTTGCTTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFPVLQI*TSCFCC
Trigger: ACAGCAAAAGCAAGATGTCAAAATCTGGAGGACAGG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTCACGCTTATATTCTTaGACAGGCTCCAATCTCATC +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFSRLYS*TGSNLI
Trigger: GATGAGATTGGAGCCTGTCAAAGAATATAAGCGTGA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAATGACATAATTGCATaGCCCATATGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSNDIIA*PICTIS
Trigger: AGAGATTGTGCATATGGGCAATGCAATTATGTCATT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTGAATGCTCAGCATACTaGGTGACAATGTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIECSAY*VTMYSN
Trigger: ATTGGAATACATTGTCACCAAGTATGCTGAGCATTC...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAAGACCAGAGAGGCTTaGAAAGAATCCAGCATCTTT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFKTREA*KESSIF
Trigger: AAAGATGCTGGATTCTTTCAAAGCCTCTCTGGTCTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTATATGTTCAGAGAGATTaGTCAATAACACTGCCACAT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVYVQRD*SITLPH
Trigger: ATGTGGCAGTGTTATTGACAAATCTCTCTGAACATA...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTTAGATTCCTTCACTaGAGGTTTTTCCCACTGAGT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLRFLH*RFFPLS
Trigger: ACTCAGTGGGAAAAACCTCAAGTGAAGGAATCTAAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp TTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGATTGCATCTCAAAGATaGTATCCTCACAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: FKLILETVTSKYHGKIRSIASQR*YPHRSS
Trigger: TGAACTTCTGTGAGGATACAATCTTTGAGATGCAAT...CGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAAAAGCAGGATGAAGTaGATAGCGAAGGCTACAAAC +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFKSRMK*IAKATN
Trigger: GTTTGTAGCCTTCGCTATCAACTTCATCCTGCTTTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp CTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAATCAATAATAAGACCTaGAATGATGGCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: LILETVTSKYHGKIRSKVINNKT*NDGQQD
Trigger: ATCTTGCTGGCCATCATTCAAGGTCTTATTATTGAT...TACCTTCGATCTAATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 90 bp AGTCTGTCCAACTTACTAATTAACCAATCAAGGTTATTGGAGAATTaGGCACAATTGTTTCTGTTTCCACGTATGAGAGCGGCTAGTAAT +
Preference number: 5 (lower is better)
Translates to: SLSNLLINQSRLLEN*AQLFLFPRMRAASN
Trigger: ATTACTAGCCGCTCTCATACGTGGAAACAGAAACAATTGTGCTCAATTCTCCAATAACCTTGATTGGTTAATTAGTAAGTTGGACAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTCTTGGATGCTACCATTaGATATCGAGAGATGAAGAT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFLGCYH*ISRDED
Trigger: ATCTTCATCTCTCGATATCAAATGGTAGCATCCAAG...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAGAGCGGCTAGTAATTaGTATAGCAGGTTCAGAATT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFRAASN*YSRFRI
Trigger: AATTCTGAACCTGCTATACAAATTACTAGCCGCTCT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAATGACATAATTGCATaGCCCATATGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKINDIIA*PICTIS
Trigger: AGAGATTGTGCATATGGGCAATGCAATTATGTCATT...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTGAATGCTCAGCATACTaGGTGACAATGTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFECSAY*VTMYSN
Trigger: ATTGGAATACATTGTCACCAAGTATGCTGAGCATTC...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTAAGAGAATTAAAAATTaGCTTGGTGACTGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFKRIKN*LGDCQS
Trigger: GCTCTGGCAGTCACCAAGCAAATTTTTAATTCTCTT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp AAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTTATGTTCAGAGAGATTaGTCAATAACACTGCCACAT +
Preference number: 5 (lower is better)
Translates to: KLFKLILETVTSKYHGKIYVQRD*SITLPH
Trigger: ATGTGGCAGTGTTATTGACAAATCTCTCTGAACATA...AATTTTTCCATGGTACTTGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTTATGTTCAGAGAGATTaGTCAATAACACTGCCACAT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFYVQRD*SITLPH
Trigger: ATGTGGCAGTGTTATTGACAAATCTCTCTGAACATA...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS-3UTR CAA 90 bp GACACTTTGCCATCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATCTATTTTATCAATAATAAGACCTaGAATGATGGCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: DTLPSFVHKSQVNYQIYFINNKT*NDGQQD
Trigger: ATCTTGCTGGCCATCATTCAAGGTCTTATTATTGAT...AAAATAGATTTGGTAATTAACTTGGCTTTTGTGCACGAAGGATGGCAAAGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp ATGTGGAGTGCCATCATCTGCAGGGGTTCTAGGCACTaGACCACCCAGCCATGGCGCTCGCTCACCCGCTCT +
Preference number: 6 (lower is better)
Translates to: MWSAIICRGSRH*TTQPWRSLTRS
Trigger: AGAGCGGGTGAGCGAGCGCCATGGCTGGGTGGTGCAGTGCCTAGAACCCCTGCAGATGATGGCACTCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp GCCTCCTGGGTGTCCCCCTTGCCATCGGTCTTCAGCTaGTCCTCCTCCTGCACAGTCTTCACCGCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: ASWVSPLPSVFS*SSSCTVFTAFF
Trigger: GAAGAAGGCGGTGAAGACTGTGCAGGAGGAGGAGCAGCTGAAGACCGATGGCAAGGGGGACACCCAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp ATCTGCAGGGGTTCTAGGCACTGCACCACCCAGCCATaGCGCTCGCTCACCCGCTCTGTCTCCACTTTGAGG +
Preference number: 6 (lower is better)
Translates to: ICRGSRHCTTQP*RSLTRSVSTLR
Trigger: CCTCAAAGTGGAGACAGAGCGGGTGAGCGAGCGCCATGGCTGGGTGGTGCAGTGCCTAGAACCCCTGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CAACCAGGTCTTCCGTGGGGACCAGGGAGCGCAGGATaGACCGGATCCGGATGGCTTCCCCTTTCCCTGTTT +
Preference number: 6 (lower is better)
Translates to: QPGLPWGPGSAG*TGSGWLPLSLF
Trigger: AAACAGGGAAAGGGGAAGCCATCCGGATCCGGTCCATCCTGCGCTCCCTGGTCCCCACGGAAGACCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp GGCTTGAGGCATGTCCTCAGGCCCACCCCAGGCAATCCGTGTCTCTaGGACTCATCCGGGTATAGGCGGATATTCCTGGTGGCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: GLRHVLRPTPGNPCL*DSSGYRRIFLVALV
Trigger: CACCAGCGCCACCAGGAATATCCGCCTATACCCGGATGAGTCCAAGAGACACGGATTGCCTGGGGTGGGCCTGAGGACATGCCTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CTGGGCATTCGACTCCAGAGTACAGGCTGGATGGTTTaGACATCCAGCCGAGGTGGACACTGTGGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: LGIRLQSTGWMV*TSSRGGHCGVG
Trigger: CCCCACCCCACAGTGTCCACCTCGGCTGGATGTCCAAACCATCCAGCCTGTACTCTGGAGTCGAATGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CGTCACCACAAAGCAAGGGGTGGAGAACCTGAAGCCTaGCTTGAGGCATGTCCTCAGGCCCACCCCAGGCAA +
Preference number: 6 (lower is better)
Translates to: RHHKARGGEPEA*LEACPQAHPRQ
Trigger: TTGCCTGGGGTGGGCCTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCCACCCCTTGCTTTGTGGTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp GCTGGGCATTCGACTCCAGAGTACAGGCTGGATGGTTaGGACATCCAGCCGAGGTGGACACTGTGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: AGHSTPEYRLDG*DIQPRWTLWGG
Trigger: CCCACCCCACAGTGTCCACCTCGGCTGGATGTCCAAACCATCCAGCCTGTACTCTGGAGTCGAATGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp ACCACAAAGCAAGGGGTGGAGAACCTGAAGCCTGGCTaGAGGCATGTCCTCAGGCCCACCCCAGGCAATCCG +
Preference number: 6 (lower is better)
Translates to: TTKQGVENLKPG*RHVLRPTPGNP
Trigger: CGGATTGCCTGGGGTGGGCCTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCCACCCCTTGCTTTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp AGCGGTGCCTGGGCAGATTGTAGAGGGGAGCCATCCTaGAACAGGCCACCACTGCCCGTTTCCGTTGCTTTG +
Preference number: 6 (lower is better)
Translates to: SGAWADCRGEPS*NRPPLPVSVAL
Trigger: CAAAGCAACGGAAACGGGCAGTGGTGGCCTGTTTCAGGATGGCTCCCCTCTACAATCTGCCCAGGCACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp ATCTTAATAGCACCCTGCATAGCCGCCAGCAGTCCGTaGCCTCCTTCACCCCTCAGAGCTGGGCCGAAGCAC +
Preference number: 6 (lower is better)
Translates to: ILIAPCIAASSP*PPSPLRAGPKH
Trigger: GTGCTTCGGCCCAGCTCTGAGGGGTGAAGGAGGCAACGGACTGCTGGCGGCTATGCAGGGTGCTATTAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp TCACTCGTCACCACAAAGCAAGGGGTGGAGAACCTGAAGCCTGGCTaGAGGCATGTCCTCAGGCCCACCCCAGGCAATCCGTGTCTCTTG +
Preference number: 6 (lower is better)
Translates to: SLVTTKQGVENLKPG*RHVLRPTPGNPCLL
Trigger: CAAGAGACACGGATTGCCTGGGGTGGGCCTGAGGACATGCCTCAAGCCAGGCTTCAGGTTCTCCACCCCTTGCTTTGTGGTGACGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp GCCTTGATGCCAACGCTGACCCCTGCTTCCTTCAAACACGAAGGCTaGATCATCAGCCCCCAGCTCAATGTCAGGACGACAGCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: ALMPTLTPASFKHEG*IISPQLNVRTTAWP
Trigger: AGGCCAGGCTGTCGTCCTGACATTGAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGAAGGAAGCAGGGGTCAGCGTTGGCATCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp ATCTGCAGCTTGACAGACTCAGGCAATCGGGTCTGCAGCAAGCCTTaGACTGGAGCCTCCTTGCAGGCCTTTTCTCCAGCCTCCACTGCC +
Preference number: 6 (lower is better)
Translates to: ICSLTDSGNRVCSKP*TGASLQAFSPASTA
Trigger: GGCAGTGGAGGCTGGAGAAAAGGCCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGACCCGATTGCCTGAGTCTGTCAAGCTGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp TCCAGGGTGGGGATGAAGTGGCTTCGAAGCAGGTCGGGCCTGGCTTaGCTGATAATTGGCTGGGCATACACTGCGATGCGCTTCATCCAG +
Preference number: 6 (lower is better)
Translates to: SRVGMKWLRSRSGLA*LIIGWAYTAMRFIQ
Trigger: CTGGATGAAGCGCATCGCAGTGTATGCCCAGCCAATTATCAGCAAAGCCAGGCCCGACCTGCTTCGAAGCCACTTCATCCCCACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp GTAACCCTGGGAAGGGAGGTCGAGGGCAGGGTTCTCTaGGATCTTAATAGCACCCTGCATAGCCGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: VTLGREVEGRVL*DLNSTLHSRQQ
Trigger: CTGCTGGCGGCTATGCAGGGTGCTATTAAGATCTCAGAGAACCCTGCCCTCGACCTCCCTTCCCAGGGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CAATGGCGTAGAAGAGCTGTGAGAGGTCCACGTGGCTaGACAGGGCAGAAGCCACTCGGCTATTTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: QWRRRAVRGPRG*TGQKPLGYFPE
Trigger: CTCTGGGAAATAGCCGAGTGGCTTCTGCCCTGTGCAGCCACGTGGACCTCTCACAGCTCTTCTACGCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CACATCTGCAGCTTGACAGACTCAGGCAATCGGGTCTaGAGCAAGCCTTTGACTGGAGCCTCCTTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: HICSLTDSGNRV*SKPLTGASLQA
Trigger: GGCCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGACCCGATTGCCTGAGTCTGTCAAGCTGCAGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp TCGAGGGCAGGGTTCTCTGAGATCTTAATAGCACCCTaGATAGCCGCCAGCAGTCCGTTGCCTCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: SRAGFSEILIAP*IAASSPLPPSP
Trigger: GGGTGAAGGAGGCAACGGACTGCTGGCGGCTATGCAGGGTGCTATTAAGATCTCAGAGAACCCTGCCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp ATGTCCTCAGGCCCACCCCAGGCAATCCGTGTCTCTTaGACTCATCCGGGTATAGGCGGATATTCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: MSSGPPQAIRVS*THPGIGGYSWW
Trigger: CCACCAGGAATATCCGCCTATACCCGGATGAGTCCAAGAGACACGGATTGCCTGGGGTGGGCCTGAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp CATGTCCTCAGGCCCACCCCAGGCAATCCGTGTCTCTaGGACTCATCCGGGTATAGGCGGATATTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: HVLRPTPGNPCL*DSSGYRRIFLV
Trigger: CACCAGGAATATCCGCCTATACCCGGATGAGTCCAAGAGACACGGATTGCCTGGGGTGGGCCTGAGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp GATGGACCGGATCCGGATGGCTTCCCCTTTCCCTGTTaGGATGAGATGCATTTCGGGAGCACAGCGGCCCAA +
Preference number: 6 (lower is better)
Translates to: DGPDPDGFPFPC*DEMHFGSTAAQ
Trigger: TTGGGCCGCTGTGCTCCCGAAATGCATCTCATCCAAACAGGGAAAGGGGAAGCCATCCGGATCCGGTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp GGGATGAAGTGGCTTCGAAGCAGGTCGGGCCTGGCTTaGCTGATAATTGGCTGGGCATACACTGCGATGCGC +
Preference number: 6 (lower is better)
Translates to: GMKWLRSRSGLA*LIIGWAYTAMR
Trigger: GCGCATCGCAGTGTATGCCCAGCCAATTATCAGCAAAGCCAGGCCCGACCTGCTTCGAAGCCACTTCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CAAAGCCATAGGAGTACAGATCATCACCGACACCATTaGCTCCCCATCCTTCTCCACCACCAGGGTACGGGG +
Preference number: 6 (lower is better)
Translates to: QSHRSTDHHRHH*LPILLHHQGTG
Trigger: CCCCGTACCCTGGTGGTGGAGAAGGATGGGGAGGCAATGGTGTCGGTGATGATCTGTACTCCTATGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CAAAGGCTGTTCCACCTGCTCAAGGTGGAAGAGAGCTaGCGAAATGCTCTGCACCCGCTCCACCGTCTTTTC +
Preference number: 6 (lower is better)
Translates to: QRLFHLLKVEES*RNALHPLHRLF
Trigger: GAAAAGACGGTGGAGCGGGTGCAGAGCATTTCGGCAGCTCTCTTCCACCTTGAGCAGGTGGAACAGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CAGACCGAAGGAGGCCAGGCAAGTACTTGTTGTCAATaGCGTAGAAGAGCTGTGAGAGGTCCACGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: QTEGGQASTCCQ*RRRAVRGPRGC
Trigger: GCAGCCACGTGGACCTCTCACAGCTCTTCTACGCCATTGACAACAAGTACTTGCCTGGCCTCCTTCGGTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CTGAGGGATGTCAGGACACATGTCCTCCACCTTGTCTaGCATCCCCAGAATAGAGCGCTCCCTGGGGGTTTT +
Preference number: 6 (lower is better)
Translates to: LRDVRTHVLHLV*HPQNRALPGGF
Trigger: AAAACCCCCAGGGAGCGCTCTATTCTGGGGATGCCAGACAAGGTGGAGGACATGTGTCCTGACATCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp GCTTCGAAGCAGGTCGGGCCTGGCTTTGCTGATAATTaGCTGGGCATACACTGCGATGCGCTTCATCCAGGA +
Preference number: 6 (lower is better)
Translates to: ASKQVGPGFADN*LGIHCDALHPG
Trigger: TCCTGGATGAAGCGCATCGCAGTGTATGCCCAGCCAATTATCAGCAAAGCCAGGCCCGACCTGCTTCGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TTGACAGACTCAGGCAATCGGGTCTGCAGCAAGCCTTaGACTGGAGCCTCCTTGCAGGCCTTTTCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: LTDSGNRVCSKP*TGASLQAFSPA
Trigger: GGCTGGAGAAAAGGCCTGCAAGGAGGCTCCAGTCAAAGGCTTGCTGCAGACCCGATTGCCTGAGTCTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp ATGTTGCATCTCGTCCTCTGGTGGCTGGAAGTAGGCTATCAAGTCTaGCAGGGTCTGCAGAACCTCTTCTGTTGGCAAGGCGACAGGGGC +
Preference number: 6 (lower is better)
Translates to: MLHLVLWWLEVGYQV*QGLQNLFCWQGDRG
Trigger: GCCCCTGTCGCCTTGCCAACAGAAGAGGTTCTGCAGACCCTGCAAGACTTGATAGCCTACTTCCAGCCACCAGAGGACGAGATGCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp CTGGGTACTCCAAGGTCAAGGCAGCAGCTCACCACATCGTCTGACTaGAGCAGATGCTGGTTGATGGAAGCCACAGCTCTGGGTATCCGT +
Preference number: 6 (lower is better)
Translates to: LGTPRSRQQLTTSSD*SRCWLMEATALGIR
Trigger: ACGGATACCCAGAGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTCAGACGATGTGGTGAGCTGCTGCCTTGACCTTGGAGTACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp ATGTCTGGCTCGCTGACTGAACCATCTTTGTTTAGGGAGGGCAGTTaGAGGGGGATGCTGATGATCCCAACCAGGTCTTCCGTGGGGACC +
Preference number: 6 (lower is better)
Translates to: MSGSLTEPSLFREGS*RGMLMIPTRSSVGT
Trigger: GGTCCCCACGGAAGACCTGGTTGGGATCATCAGCATCCCCCTCAAACTGCCCTCCCTAAACAAAGATGGTTCAGTCAGCGAGCCAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TGCTGTTCTGTGTGCCGAAGGTCTTGTGGGTCACCTTaGGGCATGGAGGGCTGTCCATGGTGCCATCAATTC +
Preference number: 6 (lower is better)
Translates to: CCSVCRRSCGSP*GMEGCPWCHQF
Trigger: GAATTGATGGCACCATGGACAGCCCTCCATGCCTCAAGGTGACCCACAAGACCTTCGGCACACAGAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp CACCATTCCCTGAAGCTCCCTGGACAGCACAACATTTaGGAGATCCAGAGGGGCGGGGCTGTAACTATTGCC +
Preference number: 6 (lower is better)
Translates to: HHSLKLPGQHNI*EIQRGGAVTIA
Trigger: GGCAATAGTTACAGCCCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCCAGGGAGCTTCAGGGAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CAGGCATGCTCAGGCGGCAGTAGATCATGTTGGCATTaGTGTTCTGTGTGCCGAAGGTCTTGTGGGTCACCT +
Preference number: 6 (lower is better)
Translates to: QACSGGSRSCWH*CSVCRRSCGSP
Trigger: AGGTGACCCACAAGACCTTCGGCACACAGAACAGCAATGCCAACATGATCTACTGCCGCCTGAGCATGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp AATGCCATAAACACGGTCCAAGAACAGCACCATGGGTaGCTTGTGGTCAGGGCAGAAGTTGGCCGCCATGTC +
Preference number: 6 (lower is better)
Translates to: NAINTVQEQHHG*LVVRAEVGRHV
Trigger: GACATGGCGGCCAACTTCTGCCCTGACCACAAGGCACCCATGGTGCTGTTCTTGGACCGTGTTTATGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CAGCAGCTCACCACATCGTCTGACTTGAGCAGATGCTaGTTGATGGAAGCCACAGCTCTGGGTATCCGTCCT +
Preference number: 6 (lower is better)
Translates to: QQLTTSSDLSRC*LMEATALGIRP
Trigger: AGGACGGATACCCAGAGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTCAGACGATGTGGTGAGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp GAGTACAGGCTGGATGGTTTGGACATCCAGCCGAGGTaGACACTGTGGGGTGGGGTTCTTCTCTTCACTCTT +
Preference number: 6 (lower is better)
Translates to: EYRLDGLDIQPR*TLWGGVLLFTL
Trigger: AAGAGTGAAGAGAAGAACCCCACCCCACAGTGTCCACCTCGGCTGGATGTCCAAACCATCCAGCCTGTACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CTCATGGAAGTCATACAGCTCCTCTCGGATCTCCTCTaGGCAGGGGCAGTTCTCTCCCAGGTGAAAGTTGAG +
Preference number: 6 (lower is better)
Translates to: LMEVIQLLSDLL*AGAVLSQVKVE
Trigger: CTCAACTTTCACCTGGGAGAGAACTGCCCCTGCCCAGAGGAGATCCGAGAGGAGCTGTATGACTTCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp TTTTTGGACCTCAAAGGCTGTTCCACCTGCTCAAGGTaGAAGAGAGCTGCCGAAATGCTCTGCACCCGCTCC +
Preference number: 6 (lower is better)
Translates to: FLDLKGCSTCSR*KRAAEMLCTRS
Trigger: GGAGCGGGTGCAGAGCATTTCGGCAGCTCTCTTCCACCTTGAGCAGGTGGAACAGCCTTTGAGGTCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp CTCGTCCTCTGGTGGCTGGAAGTAGGCTATCAAGTCTaGCAGGGTCTGCAGAACCTCTTCTGTTGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: LVLWWLEVGYQV*QGLQNLFCWQG
Trigger: GCCTTGCCAACAGAAGAGGTTCTGCAGACCCTGCAAGACTTGATAGCCTACTTCCAGCCACCAGAGGACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp CCAAGGTCAAGGCAGCAGCTCACCACATCGTCTGACTaGAGCAGATGCTGGTTGATGGAAGCCACAGCTCTG +
Preference number: 6 (lower is better)
Translates to: PRSRQQLTTSSD*SRCWLMEATAL
Trigger: CAGAGCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTCAGACGATGTGGTGAGCTGCTGCCTTGACCTTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp CCAACGCTGACCCCTGCTTCCTTCAAACACGAAGGCTaGATCATCAGCCCCCAGCTCAATGTCAGGACGACA +
Preference number: 6 (lower is better)
Translates to: PTLTPASFKHEG*IISPQLNVRTT
Trigger: TGTCGTCCTGACATTGAGCTGGGGGCTGATGATCAAGCCTTCGTGTTTGAAGGAAGCAGGGGTCAGCGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp CCACCATTCCCTGAAGCTCCCTGGACAGCACAACATTaGAGAGATCCAGAGGGGCGGGGCTGTAACTATTGC +
Preference number: 6 (lower is better)
Translates to: PPFPEAPWTAQH*RDPEGRGCNYC
Trigger: GCAATAGTTACAGCCCCGCCCCTCTGGATCTCTCAAATGTTGTGCTGTCCAGGGAGCTTCAGGGAATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp GACCACATCTCCTGGCTGCCAAGTTCGTCCAAAATACCCACTGCCTaGATGCCAACGCTGACCCCTGCTTCCTTCAAACACGAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: DHISWLPSSSKIPTA*MPTLTPASFKHEGL
Trigger: CAAGCCTTCGTGTTTGAAGGAAGCAGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGACGAACTTGGCAGCCAGGAGATGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TACTCCAAGGTCAAGGCAGCAGCTCACCACATCGTCTaGCTTGAGCAGATGCTGGTTGATGGAAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: YSKVKAAAHHIV*LEQMLVDGSHS
Trigger: GCTGTGGCTTCCATCAACCAGCATCTGCTCAAGTCAGACGATGTGGTGAGCTGCTGCCTTGACCTTGGAGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp GCACGGCCTCGGTTAGCATGCTCAGGGCTTTTGTCTTaGGAATCTGCAAGGGAATCTCAGGGCTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: ARPRLACSGLLS*ESARESQGSAS
Trigger: AGAAGCAGAGCCCTGAGATTCCCTTGCAGATTCTCAAGACAAAAGCCCTGAGCATGCTAACCGAGGCCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp CTGCCTCACCCTTTACAAAGTGGACCAGCTCAGTGGTaGCACCTGGCTCAGTCACTTCTGCCCTGTCAGTTT +
Preference number: 6 (lower is better)
Translates to: LPHPLQSGPAQW*HLAQSLLPCQF
Trigger: AAACTGACAGGGCAGAAGTGACTGAGCCAGGTGTCACCACTGAGCTGGTCCACTTTGTAAAGGGTGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CATCTCCTGGCTGCCAAGTTCGTCCAAAATACCCACTaGCTTGATGCCAACGCTGACCCCTGCTTCCTTCAA +
Preference number: 6 (lower is better)
Translates to: HLLAAKFVQNTH*LDANADPCFLQ
Trigger: TTGAAGGAAGCAGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGACGAACTTGGCAGCCAGGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp GTACTGGCATCTGTCCCAAGATTCATGCGGCCAATCTaGGATAGCCCCAGAGAGCAAATGGGCACAAAACCG +
Preference number: 6 (lower is better)
Translates to: VLASVPRFMRPI*DSPREQMGTKP
Trigger: CGGTTTTGTGCCCATTTGCTCTCTGGGGCTATCCCAGATTGGCCGCATGAATCTTGGGACAGATGCCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp AGGAGGTTGAACATCATCCTCACCAGTTCCGCATCCTaGATTTGGTTCTCCTGGGCCCAGCGGATCATTGTC +
Preference number: 6 (lower is better)
Translates to: RRLNIILTSSAS*IWFSWAQRIIV
Trigger: GACAATGATCCGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAACTGGTGAGGATGATGTTCAACCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp AAGCTTAAGGGGCATCTTGCAGTACTCGCTGAGCTGTaGCACGTCAAAAACCAGACGACGCAGGAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: KLKGHLAVLAEL*HVKNQTTQELL
Trigger: CAGCAACTCCTGCGTCGTCTGGTTTTTGACGTGCCACAGCTCAGCGAGTACTGCAAGATGCCCCTTAAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp GATCCAGAGGGGCGGGGCTGTAACTATTGCCCTGATTaGTCTGGGACACACATCGAAGCTTCTCATTCTCTC +
Preference number: 6 (lower is better)
Translates to: DPEGRGCNYCPD*SGTHIEASHSL
Trigger: GAGAGAATGAGAAGCTTCGATGTGTGTCCCAGACCAATCAGGGCAATAGTTACAGCCCCGCCCCTCTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TCCTGGCTGCCAAGTTCGTCCAAAATACCCACTGCCTaGATGCCAACGCTGACCCCTGCTTCCTTCAAACAC +
Preference number: 6 (lower is better)
Translates to: SWLPSSSKIPTA*MPTLTPASFKH
Trigger: GTGTTTGAAGGAAGCAGGGGTCAGCGTTGGCATCAAGGCAGTGGGTATTTTGGACGAACTTGGCAGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp ATCATGTTGGCATTGCTGTTCTGTGTGCCGAAGGTCTaGTGGGTCACCTTGAGGCATGGAGGGCTGTCCATG +
Preference number: 6 (lower is better)
Translates to: IMLALLFCVPKV*WVTLRHGGLSM
Trigger: CATGGACAGCCCTCCATGCCTCAAGGTGACCCACAAGACCTTCGGCACACAGAACAGCAATGCCAACATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp TGCAGAACCTCTTCTGTTGGCAAGGCGACAGGGGCAGTTGTGCGATaGTTTCCACTGACAAACTGGCTGAATAAGGCGGTTGTGTTCCGG +
Preference number: 6 (lower is better)
Translates to: CRTSSVGKATGAVVR*FPLTNWLNKAVVFR
Trigger: CCGGAACACAACCGCCTTATTCAGCCAGTTTGTCAGTGGAAACAATCGCACAACTGCCCCTGTCGCCTTGCCAACAGAAGAGGTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp GCCTGGAGCAACTCCCCAATGCTGTCATACTGTCTCCGAAGGAGGTaGAACATCATCCTCACCAGTTCCGCATCCTGGATTTGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: AWSNSPMLSYCLRRR*NIILTSSASWIWFS
Trigger: GGAGAACCAAATCCAGGATGCGGAACTGGTGAGGATGATGTTCAACCTCCTTCGGAGACAGTATGACAGCATTGGGGAGTTGCTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp CCAGGCGGGAAGTTTTGGCATCTTGTGCTTTGTAGGTaGCCCAAAGGCCACTGGCTACATGCTGAACAAAGC +
Preference number: 6 (lower is better)
Translates to: PGGKFWHLVLCR*PKGHWLHAEQS
Trigger: GCTTTGTTCAGCATGTAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAGATGCCAAAACTTCCCGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TTGAGAATCTGCAAGGGAATCTCAGGGCTCTGCTTCTaGTGGTCCTCACTCGTCACCACAAAGCAAGGGGTG +
Preference number: 6 (lower is better)
Translates to: LRICKGISGLCF*WSSLVTTKQGV
Trigger: CACCCCTTGCTTTGTGGTGACGAGTGAGGACCATCAGAAGCAGAGCCCTGAGATTCCCTTGCAGATTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TTCAATGACATGGGGCATCTCAGTGTACCGGGCACCTaGCTCGGCCAAGTCATTGATTTCCTTCATCAGGCC +
Preference number: 6 (lower is better)
Translates to: FNDMGHLSVPGT*LGQVIDFLHQA
Trigger: GGCCTGATGAAGGAAATCAATGACTTGGCCGAGTCAGGTGCCCGGTACACTGAGATGCCCCATGTCATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp AAGTTGGCCATAAAGGCTTCTGGCTTCTCAGCCTTCTaGCCGCGCCGTCTCGTCTTCTTTACTGTCACGTCT +
Preference number: 6 (lower is better)
Translates to: KLAIKASGFSAF*PRRLVFFTVTS
Trigger: AGACGTGACAGTAAAGAAGACGAGACGGCGCGGTCAGAAGGCTGAGAAGCCAGAAGCCTTTATGGCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TCAGGCAGTAATAGCCCACCACACAGACCAGAGAGATaGTGGTGTGGACAATGGCCAAAGCACGCAGTGTTG +
Preference number: 6 (lower is better)
Translates to: SGSNSPPHRPER*WCGQWPKHAVL
Trigger: CAACACTGCGTGCTTTGGCCATTGTCCACACCATCATCTCTCTGGTCTGTGTGGTGGGCTATTACTGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp GGCCGGATGCTGGTGACATCATTAATTAGTCGTGTCTaGAGAAGCAGGTTCCTCCGGGGTAGTAGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: GRMLVTSLISRV*RSRFLRGSRLS
Trigger: TGACAACCTACTACCCCGGAGGAACCTGCTTCTGCAGACACGACTAATTAATGATGTCACCAGCATCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp TGGCTACAATATCCCCACCCCAGACCATGTAGCAGTTaGTGCGTTTCACACTTTCATGGACCCGGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: WLQYPHPRPCSS*CVSHFHGPGLF
Trigger: AAAGAGGCCGGGTCCATGAAAGTGTGAAACGCAGCAACTGCTACATGGTCTGGGGTGGGGATATTGTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CTGAAACAAGGACGTGCTGGTAGGCTGAAGGAAGACTaGAGGGAACACTTTGGTGTTAGGCTCCACCTGGTA +
Preference number: 6 (lower is better)
Translates to: LKQGRAGRLKED*REHFGVRLHLV
Trigger: TACCAGGTGGAGCCTAACACCAAAGTGTTCCCTGCAGTCTTCCTTCAGCCTACCAGCACGTCCTTGTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CATTTGAGAGATCCAGAGGGGCGGGGCTGTAACTATTaGCCTGATTGGTCTGGGACACACATCGAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: HLRDPEGRGCNY*PDWSGTHIEAS
Trigger: AGAAGCTTCGATGTGTGTCCCAGACCAATCAGGGCAATAGTTACAGCCCCGCCCCTCTGGATCTCTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CACAGAGATCTGGAGGAATGTACTTGGCTTCTGAGGTaGGTTCCAAGAAGCACAGGCGATTCCCAAGTCCCT +
Preference number: 6 (lower is better)
Translates to: HRDLEECTWLLR*VPRSTGDSQVP
Trigger: AGGGACTTGGGAATCGCCTGTGCTTCTTGGAACCCACCTCAGAAGCCAAGTACATTCCTCCAGATCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp TATCAAGTCTTGCAGGGTCTGCAGAACCTCTTCTGTTaGCAAGGCGACAGGGGCAGTTGTGCGATTGTTTCC +
Preference number: 6 (lower is better)
Translates to: YQVLQGLQNLFC*QGDRGSCAIVS
Trigger: GGAAACAATCGCACAACTGCCCCTGTCGCCTTGCCAACAGAAGAGGTTCTGCAGACCCTGCAAGACTTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp ATTCAACAGGCATGCTCAGGCGGCAGTAGATCATGTTaGCATTGCTGTTCTGTGTGCCGAAGGTCTTGTGGG +
Preference number: 6 (lower is better)
Translates to: IQQACSGGSRSC*HCCSVCRRSCG
Trigger: CCCACAAGACCTTCGGCACACAGAACAGCAATGCCAACATGATCTACTGCCGCCTGAGCATGCCTGTTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CTGGATGGTTTGGACATCCAGCCGAGGTGGACACTGTaGGGTGGGGTTCTTCTCTTCACTCTTAAATATGGC +
Preference number: 6 (lower is better)
Translates to: LDGLDIQPRWTL*GGVLLFTLKYG
Trigger: GCCATATTTAAGAGTGAAGAGAAGAACCCCACCCCACAGTGTCCACCTCGGCTGGATGTCCAAACCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CAGCTGTATCGTGATTTTGCGAGTGAGATGAGCTCCTaGTCGCCTGGAGTACACATGTTCAGACCAATGGGC +
Preference number: 6 (lower is better)
Translates to: QLYRDFASEMSS*SPGVHMFRPMG
Trigger: GCCCATTGGTCTGAACATGTGTACTCCAGGCGACCAGGAGCTCATCTCACTCGCAAAATCACGATACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp CCTTGTGCCGCCCCTTCTCCGCCATTTTCAACGGTGTaGGCAAGCATTTCTTGCAGTGCTCTGACAGATAAG +
Preference number: 6 (lower is better)
Translates to: PCAAPSPPFSTV*ASISCSALTDK
Trigger: CTTATCTGTCAGAGCACTGCAAGAAATGCTTGCCAACACCGTTGAAAATGGCGGAGAAGGGGCGGCACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TCTTTTCAGAGGTCCCAGGCGGGAAGTTTTGGCATCTaGTGCTTTGTAGGTGACCCAAAGGCCACTGGCTAC +
Preference number: 6 (lower is better)
Translates to: SFQRSQAGSFGI*CFVGDPKATGY
Trigger: GTAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAGATGCCAAAACTTCCCGCCTGGGACCTCTGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp CTATCAAGTCTTGCAGGGTCTGCAGAACCTCTTCTGTaGGCAAGGCGACAGGGGCAGTTGTGCGATTGTTTC +
Preference number: 6 (lower is better)
Translates to: LSSLAGSAEPLL*ARRQGQLCDCF
Trigger: GAAACAATCGCACAACTGCCCCTGTCGCCTTGCCAACAGAAGAGGTTCTGCAGACCCTGCAAGACTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp GAAGGCAGCCAATCTCCAGGTCTACATTGCTCCGACTaGATCTTTGGGAACTGGCTACAATATCCCCACCCC +
Preference number: 6 (lower is better)
Translates to: EGSQSPGLHCSD*IFGNWLQYPHP
Trigger: GGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTAGACCTGGAGATTGGCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp GGGAAGGCAATCTGCGACTTCTCAGTACCCAGCACATaGACCATCACTTCCATCACAGTCTCATGCATGCCG +
Preference number: 6 (lower is better)
Translates to: GKAICDFSVPST*TITSITVSCMP
Trigger: CGGCATGCATGAGACTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTGAGAAGTCGCAGATTGCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TCGCTGACTGAACCATCTTTGTTTAGGGAGGGCAGTTaGAGGGGGATGCTGATGATCCCAACCAGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: SLTEPSLFREGS*RGMLMIPTRSS
Trigger: GGAAGACCTGGTTGGGATCATCAGCATCCCCCTCAAACTGCCCTCCCTAAACAAAGATGGTTCAGTCAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp ACCATCTTTGGGAAGGCAATCTGCGACTTCTCAGTACCCAGCACATaGACCATCACTTCCATCACAGTCTCATGCATGCCGAGGACTCTC +
Preference number: 6 (lower is better)
Translates to: TIFGKAICDFSVPST*TITSITVSCMPRTL
Trigger: GAGAGTCCTCGGCATGCATGAGACTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTGAGAAGTCGCAGATTGCCTTCCCAAAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp ACTTTCTTTAGATCCTCTTCCGCAGCTGGGTTAACATaGGCAATGTGGCACCCCAGGGCCAGCAAGGTTTTC +
Preference number: 6 (lower is better)
Translates to: TFFRSSSAAGLT*AMWHPRASKVF
Trigger: GAAAACCTTGCTGGCCCTGGGGTGCCACATTGCTCATGTTAACCCAGCTGCGGAAGAGGATCTAAAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp AAGGCAGCCAATCTCCAGGTCTACATTGCTCCGACTTaGTCTTTGGGAACTGGCTACAATATCCCCACCCCA +
Preference number: 6 (lower is better)
Translates to: KAANLQVYIAPT*SLGTGYNIPTP
Trigger: TGGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTAGACCTGGAGATTGGCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp GGAAGGCAATCTGCGACTTCTCAGTACCCAGCACATTaGCCATCACTTCCATCACAGTCTCATGCATGCCGA +
Preference number: 6 (lower is better)
Translates to: GRQSATSQYPAH*PSLPSQSHACR
Trigger: TCGGCATGCATGAGACTGTGATGGAAGTGATGGTCAATGTGCTGGGTACTGAGAAGTCGCAGATTGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TGTCCCTACAGCTGTATCGTGATTTTGCGAGTGAGATaGGCTCCTGGTCGCCTGGAGTACACATGTTCAGAC +
Preference number: 6 (lower is better)
Translates to: CPYSCIVILRVR*APGRLEYTCSD
Trigger: GTCTGAACATGTGTACTCCAGGCGACCAGGAGCTCATCTCACTCGCAAAATCACGATACAGCTGTAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp GACCAGCTCAGTGGTGACACCTGGCTCAGTCACTTCTaGCCTGTCAGTTTCTATTACATCATCATGGATCCC +
Preference number: 6 (lower is better)
Translates to: DQLSGDTWLSHF*PVSFYYIIMDP
Trigger: GGGATCCATGATGATGTAATAGAAACTGACAGGGCAGAAGTGACTGAGCCAGGTGTCACCACTGAGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp ATCATCCAGGTTAATCATGCACCCGACCACATCTCCTaGCTGCCAAGTTCGTCCAAAATACCCACTGCCTTG +
Preference number: 6 (lower is better)
Translates to: IIQVNHAPDHIS*LPSSSKIPTAL
Trigger: CAAGGCAGTGGGTATTTTGGACGAACTTGGCAGCCAGGAGATGTGGTCGGGTGCATGATTAACCTGGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CCAGGTCTACATTGCTCCGACTTGATCTTTGGGAACTaGCTACAATATCCCCACCCCAGACCATGTAGCAGT +
Preference number: 6 (lower is better)
Translates to: PGLHCSDLIFGN*LQYPHPRPCSS
Trigger: ACTGCTACATGGTCTGGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTAGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CCAATCTCCAGGTCTACATTGCTCCGACTTGATCTTTaGGAACTGGCTACAATATCCCCACCCCAGACCATG +
Preference number: 6 (lower is better)
Translates to: PISRSTLLRLDL*ELATISPPQTM
Trigger: CATGGTCTGGGGTGGGGATATTGTAGCCAGTTCCCAAAGATCAAGTCGGAGCAATGTAGACCTGGAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp TTGAACATCATCCTCACCAGTTCCGCATCCTGGATTTaGTTCTCCTGGGCCCAGCGGATCATTGTCTGTGAA +
Preference number: 6 (lower is better)
Translates to: LNIILTSSASWI*FSWAQRIIVCE
Trigger: TTCACAGACAATGATCCGCTGGGCCCAGGAGAACCAAATCCAGGATGCGGAACTGGTGAGGATGATGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp GAATGGCAATCCCCAGCTTCAGTGTCTCAACCACCATaGGGCTCATCTCACCTTTGCTGGCACTTATCATCT +
Preference number: 6 (lower is better)
Translates to: EWQSPASVSQPP*GSSHLCWHLSS
Trigger: AGATGATAAGTGCCAGCAAAGGTGAGATGAGCCCCATGGTGGTTGAGACACTGAAGCTGGGGATTGCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CACCAGAGATGCTGCCTCTGCTTTGGCCTCTTCTACTaGGCTAAAGTCAAGGGCATTTTTGTCCAAACCCAG +
Preference number: 6 (lower is better)
Translates to: HQRCCLCFGLFY*AKVKGIFVQTQ
Trigger: CTGGGTTTGGACAAAAATGCCCTTGACTTTAGCCCAGTAGAAGAGGCCAAAGCAGAGGCAGCATCTCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TTGGCCTCTTCTACTGGGCTAAAGTCAAGGGCATTTTaGTCCAAACCCAGGAGTTCAGCGATGCGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LASSTGLKSRAF*SKPRSSAMRSA
Trigger: AGCAGAGCGCATCGCTGAACTCCTGGGTTTGGACAAAAATGCCCTTGACTTTAGCCCAGTAGAAGAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp TATGACCTTTCTTTTCAGAGGTCCCAGGCGGGAAGTTTTGGCATCTaGTGCTTTGTAGGTGACCCAAAGGCCACTGGCTACATGCTGAAC +
Preference number: 6 (lower is better)
Translates to: YDLSFQRSQAGSFGI*CFVGDPKATGYMLN
Trigger: GTTCAGCATGTAGCCAGTGGCCTTTGGGTCACCTACAAAGCACAAGATGCCAAAACTTCCCGCCTGGGACCTCTGAAAAGAAAGGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp ATTAGAAGGCTCGTCATTCCTCAGAACGTCCTTGTAGAGGTTCAGTaGCCATTTCACAGCTGGGTCATCAGACTTCTCCTGCAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: IRRLVIPQNVLVEVQ*PFHSWVIRLLLQVQ
Trigger: CTGCACCTGCAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAACTGAACCTCTACAAGGACGTTCTGAGGAATGACGAGCCTTCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp GCAAAACAACCTGACTGGTATCTATGGGACATGGGATaGAAGAGGCTTGGGAGAGGAACTGTGTGGTACCCA +
Preference number: 6 (lower is better)
Translates to: AKQPDWYLWDMG*KRLGRGTVWYP
Trigger: TGGGTACCACACAGTTCCTCTCCCAAGCCTCTTTCATCCCATGTCCCATAGATACCAGTCAGGTTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp ACTCCCCAATGCTGTCATACTGTCTCCGAAGGAGGTTaGACATCATCCTCACCAGTTCCGCATCCTGGATTT +
Preference number: 6 (lower is better)
Translates to: TPQCCHTVSEGG*TSSSPVPHPGF
Trigger: AAATCCAGGATGCGGAACTGGTGAGGATGATGTTCAACCTCCTTCGGAGACAGTATGACAGCATTGGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TTTCTTTCTCTTTATGGGAAGCATACCCACTGCTGCTaGGCGGCTTCAGAGGAGACGACAGGAAATACAGGC +
Preference number: 6 (lower is better)
Translates to: FLSLYGKHTHCC*AASEETTGNTG
Trigger: GCCTGTATTTCCTGTCGTCTCCTCTGAAGCCGCTCAGCAGCAGTGGGTATGCTTCCCATAAAGAGAAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp GGCCTGCATGAGCTCATTGTAGCGGAACTTCTGATTTaGCTGCAGCTTGGACACGTAAATGTCACCAAATGC +
Preference number: 6 (lower is better)
Translates to: GLHELIVAELLI*LQLGHVNVTKC
Trigger: GCATTTGGTGACATTTACGTGTCCAAGCTGCAGGCAAATCAGAAGTTCCGCTACAATGAGCTCATGCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CAGCCGAGTTCTATTTTGTTCATCCCCCAAAGCTCGTaGATGTTCTCAGCCAGTCTGTCTCGGATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: QPSSILFIPQSS*MFSASLSRIFS
Trigger: AGAGAAGATCCGAGACAGACTGGCTGAGAACATCCACGAGCTTTGGGGGATGAACAAAATAGAACTCGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp ACCCTTTACAAAGTGGACCAGCTCAGTGGTGACACCTaGCTCAGTCACTTCTGCCCTGTCAGTTTCTATTAC +
Preference number: 6 (lower is better)
Translates to: TLYKVDQLSGDT*LSHFCPVSFYY
Trigger: GTAATAGAAACTGACAGGGCAGAAGTGACTGAGCCAGGTGTCACCACTGAGCTGGTCCACTTTGTAAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CCACCCCTAGCTTCCAAATATGGTACTTCATGTCGATaGAACTTAGCCATGACACCAGAGATGCTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: PPLASKYGTSCR*NLAMTPEMLPL
Trigger: CAGAGGCAGCATCTCTGGTGTCATGGCTAAGTTCCATCGACATGAAGTACCATATTTGGAAGCTAGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp CTCGTCATTCCTCAGAACGTCCTTGTAGAGGTTCAGTaGCCATTTCACAGCTGGGTCATCAGACTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: LVIPQNVLVEVQ*PFHSWVIRLLL
Trigger: CAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAACTGAACCTCTACAAGGACGTTCTGAGGAATGACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp TTCTCCTTGATTTCCTTTGATGCTCGGAAGGAGAAGGCTGTGGATTaGGTGTCGGATTTTCCCCGGTCTTGTAGAAGAAGGCCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: FSLISFDARKEKAVD*VSDFPRSCRRRPWS
Trigger: AGACCAAGGCCTTCTTCTACAAGACCGGGGAAAATCCGACACCAAATCCACAGCCTTCTCCTTCCGAGCATCAAAGGAAATCAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp ACAAATGTCCGTACAGCTTCACGTAGGCTGTCCCTGTTTGATTTCTaGGTGCGCTCATCTAGTAATGCATATGGCACCAGGCGGGGATTT +
Preference number: 6 (lower is better)
Translates to: TNVRTASRRLSLFDF*VRSSSNAYGTRRGF
Trigger: AAATCCCCGCCTGGTGCCATATGCATTACTAGATGAGCGCACCAAGAAATCAAACAGGGACAGCCTACGTGAAGCTGTACGGACATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp GCCCTGATTGGTCTGGGACACACATCGAAGCTTCTCATTCTCTCTTaGTTGAACCAAGGCTTCTCCTTCTTTGGTCCTTTCCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: ALIGLGHTSKLLILS*LNQGFSFFGPFHCP
Trigger: TGGACAGTGGAAAGGACCAAAGAAGGAGAAGCCTTGGTTCAACAAAGAGAGAATGAGAAGCTTCGATGTGTGTCCCAGACCAATCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp GCACCCCAGGGCCAGCAAGGTTTTCAAGGTTTCCGTTaGCATCTGCAGGTTATAATTCTTCTCAGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: APQGQQGFQGFR*HLQVIILLSFR
Trigger: CCTGAAACTGAGAAGAATTATAACCTGCAGATGTCAACGGAAACCTTGAAAACCTTGCTGGCCCTGGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp ATGGTGCCATCAATTCTCACAACCTCTATGTGGGGATaGTCCTTAGGCACATTCACAAATGTTGGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: MVPSILTTSMWG*SLGTFTNVGRR
Trigger: GCGCCTCCCAACATTTGTGAATGTGCCTAAGGATCATCCCCACATAGAGGTTGTGAGAATTGATGGCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp GCCACCTTCTTTCTTGGAGTGGATTCCAAAGAGGTCTaGCATGATGTCTGTATCTCCTGCCTCACCCTTTAC +
Preference number: 6 (lower is better)
Translates to: ATFFLGVDSKEV*HDVCISCLTLY
Trigger: GTAAAGGGTGAGGCAGGAGATACAGACATCATGTCAGACCTCTTTGGAATCCACTCCAAGAAAGAAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp AGTTGCCATTTCACAGCTGGGTCATCAGACTTCTCCTaGAGGTGCAGGTTATTCCGAAGATGTTCCTTGACT +
Preference number: 6 (lower is better)
Translates to: SCHFTAGSSDFS*RCRLFRRCSLT
Trigger: AGTCAAGGAACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp GATGGTGTGGACAATGGCCAAAGCACGCAGTGTTGGTaGCATATAACCAGTGCTCTCCTGAAGAACAAAGAA +
Preference number: 6 (lower is better)
Translates to: DGVDNGQSTQCW*HITSALLKNKE
Trigger: TTCTTTGTTCTTCAGGAGAGCACTGGTTATATGGCACCAACACTGCGTGCTTTGGCCATTGTCCACACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp TACAAGTCTCCTCGCCTCTTTGTCTTCTTCCGTTCCTaGTCCTGTCCTCCAGACTTTACTTGCATGGCTTTT +
Preference number: 6 (lower is better)
Translates to: YKSPRLFVFFRS*SCPPDFTCMAF
Trigger: AAAAGCCATGCAAGTAAAGTCTGGAGGACAGGACCAGGAACGGAAGAAGACAAAGAGGCGAGGAGACTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091818.6
ENSMUST00000208290.2
CDS CCA 72 bp AACGTCCTTGTAGAGGTTCAGTTGCCATTTCACAGCTaGGTCATCAGACTTCTCCTGCAGGTGCAGGTTATT +
Preference number: 6 (lower is better)
Translates to: NVLVEVQLPFHS*VIRLLLQVQVI
Trigger: AATAACCTGCACCTGCAGGAGAAGTCTGATGACCCAGCTGTGAAATGGCAACTGAACCTCTACAAGGACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp GATGATGGTGTGGACAATGGCCAAAGCACGCAGTGTTaGTGCCATATAACCAGTGCTCTCCTGAAGAACAAA +
Preference number: 6 (lower is better)
Translates to: DDGVDNGQSTQC*CHITSALLKNK
Trigger: TTTGTTCTTCAGGAGAGCACTGGTTATATGGCACCAACACTGCGTGCTTTGGCCATTGTCCACACCATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TTCCGCACAGTACTCTCTAATGTTGGGGGTTCGTCCTaGCCGATAATTTCAGAGAGGTCACCTAATCCCACT +
Preference number: 6 (lower is better)
Translates to: FRTVLSNVGGSS*PIISERSPNPT
Trigger: AGTGGGATTAGGTGACCTCTCTGAAATTATCGGCAAGGACGAACCCCCAACATTAGAGAGTACTGTGCGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp TTTCTTTTCTTCCGCACAGTACTCTCTAATGTTGGGGGTTCGTCCTaGCCGATAATTTCAGAGAGGTCACCTAATCCCACTTCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: FLFFRTVLSNVGGSS*PIISERSPNPTSGP
Trigger: AGGGCCTGAAGTGGGATTAGGTGACCTCTCTGAAATTATCGGCAAGGACGAACCCCCAACATTAGAGAGTACTGTGCGGAAGAAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp CCAGACTTTACAGCATATGACCGTTCTACTCGGAAAAACCGGATCTaGTCTATGCTGACCTTCTCGACAGTAGGATCAGCTAGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: PDFTAYDRSTRKNRI*SMLTFSTVGSASSW
Trigger: CCAAGAACTAGCTGATCCTACTGTCGAGAAGGTCAGCATAGACAAGATCCGGTTTTTCCGAGTAGAACGGTCATATGCTGTAAAGTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp TCATCAGACTTCTCCTGCAGGTGCAGGTTATTCCGAAGATGTTCCTaGACTTCTTCATCAGTGTCCCTACAGCTGTATCGTGATTTTGCG +
Preference number: 6 (lower is better)
Translates to: SSDFSCRCRLFRRCS*TSSSVSLQLYRDFA
Trigger: CGCAAAATCACGATACAGCTGTAGGGACACTGATGAAGAAGTCAAGGAACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTCTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp AGCACACTTTCTGCTGGGTCCAACAGACTCTTGAGACGGGAATCGTaGGGCATATGTTCAGAGAGATTTGTCAATAACACTGCCACATTG +
Preference number: 6 (lower is better)
Translates to: STLSAGSNRLLRRES*GICSERFVNNTATL
Trigger: CAATGTGGCAGTGTTATTGACAAATCTCTCTGAACATATGCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACCCAGCAGAAAGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TGCAATTCAATACGAGGGCCAGCATCCCCTCCTCCTTaGAAAGATTTTGTCTGTTCTTTAGAGAGCGGAGCT +
Preference number: 6 (lower is better)
Translates to: CNSIRGPASPPP*KDFVCSLESGA
Trigger: AGCTCCGCTCTCTAAAGAACAGACAAAATCTTTTCAAGGAGGAGGGGATGCTGGCCCTCGTATTGAATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp GATAGGTTTGGGGTCAAAGTTTCCATCTGCATCCACTaGGACCTGCTTCTCCAATGTGGCTGTAATTCTCGT +
Preference number: 6 (lower is better)
Translates to: DRFGVKVSICIH*DLLLQCGCNSR
Trigger: ACGAGAATTACAGCCACATTGGAGAAGCAGGTCTCAGTGGATGCAGATGGAAACTTTGACCCCAAACCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp CTGTCAGTTTCTATTACATCATCATGGATCCCAAACTaGGTGGGGTCGGGCATGTCACCTAGGATCTTAGTC +
Preference number: 6 (lower is better)
Translates to: LSVSITSSWIPN*VGSGMSPRILV
Trigger: GACTAAGATCCTAGGTGACATGCCCGACCCCACTCAGTTTGGGATCCATGATGATGTAATAGAAACTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CATTTCACAGCTGGGTCATCAGACTTCTCCTGCAGGTaGAGGTTATTCCGAAGATGTTCCTTGACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: HFTAGSSDFSCR*RLFRRCSLTSS
Trigger: TGAAGAAGTCAAGGAACATCTTCGGAATAACCTGCACCTGCAGGAGAAGTCTGATGACCCAGCTGTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp ATTTCAGAGAGGTCACCTAATCCCACTTCAGGCCCTTaGTTTAAGCCACCTTCTTTCTTGGAGTGGATTCCA +
Preference number: 6 (lower is better)
Translates to: ISERSPNPTSGP*FKPPSFLEWIP
Trigger: TGGAATCCACTCCAAGAAAGAAGGTGGCTTAAAGCAAGGGCCTGAAGTGGGATTAGGTGACCTCTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp TCTTCTTCAAAAACTTGTAGGCAAATCTCTTCTCCATaGAGGAGGCATCCAGCTCCAAGTCCTTCATGCCTC +
Preference number: 6 (lower is better)
Translates to: SSSKTCRQISSP*RRHPAPSPSCL
Trigger: GAGGCATGAAGGACTTGGAGCTGGATGCCTCCTCCATGGAGAAGAGATTTGCCTACAAGTTTTTGAAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp TACAAGTCTCCTCGCCTCTTTGTCTTCTTCCGTTCCTaGTCCTGTCCTCCAGATTTTGACATCTTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: YKSPRLFVFFRS*SCPPDFDILLL
Trigger: CAAAAGCAAGATGTCAAAATCTGGAGGACAGGACCAGGAACGGAAGAAGACAAAGAGGCGAGGAGACTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080673.13
ENSMUST00000134358.9
ENSMUST00000208151.2
CDS CAA 72 bp ACAGCATATGACCGTTCTACTCGGAAAAACCGGATCTaGTCTATGCTGACCTTCTCGACAGTAGGATCAGCT +
Preference number: 6 (lower is better)
Translates to: TAYDRSTRKNRI*SMLTFSTVGSA
Trigger: AGCTGATCCTACTGTCGAGAAGGTCAGCATAGACAAGATCCGGTTTTTCCGAGTAGAACGGTCATATGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp GAACACCATCGCTTCTTCCTCGTCATCATCATTGAATaGGTTCCACAGGTTTGCAACATCCTCTGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: EHHRFFLVIIIE*VPQVCNILCLF
Trigger: GAAGAGACAGAGGATGTTGCAAACCTGTGGAACTCATTCAATGATGATGACGAGGAAGAAGCGATGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp ATTTGTATAGCAGGTTCAGAATTTCTTTCCAGGCCATaGCACTCTCTTCCCTTACGATCCCTGCAAAGTGTG +
Preference number: 6 (lower is better)
Translates to: ICIAGSEFLSRP*HSLPLRSLQSV
Trigger: CACACTTTGCAGGGATCGTAAGGGAAGAGAGTGGCATGGCCTGGAAAGAAATTCTGAACCTGCTATACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp GCAAATGGGCACAAAACCGTTCTCAATCTCATAGTCTaGGAAGGCAAGTTCAGAACCTTTGTTGGTGATGAG +
Preference number: 6 (lower is better)
Translates to: ANGHKTVLNLIV*EGKFRTFVGDE
Trigger: CTCATCACCAACAAAGGTTCTGAACTTGCCTTCGCAGACTATGAGATTGAGAACGGTTTTGTGCCCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp ATTCACAAATGTTGGGAGGCGCTTGCTAAACCACACTaGAACATCTCGGTTCATATTTACCGCAAAAGGCTC +
Preference number: 6 (lower is better)
Translates to: IHKCWEALAKPH*NISVHIYRKRL
Trigger: GAGCCTTTTGCGGTAAATATGAACCGAGATGTTGCAGTGTGGTTTAGCAAGCGCCTCCCAACATTTGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp TGCAATGCACTGGAGTACAACTTCATCCTCTTGCATTaGGAAGCAGGGGTCATAGAAGTTAAACGGTCTGTA +
Preference number: 6 (lower is better)
Translates to: CNALEYNFILLH*EAGVIEVKRSV
Trigger: TACAGACCGTTTAACTTCTATGACCCCTGCTTCCCAATGCAAGAGGATGAAGTTGTACTCCAGTGCATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091818.6
CDS CCA 72 bp TCCCGCAGACCTACATCAAAGGCAAGTTTATCTGTCTaGGATCTTGACGTGGTCAAGCACGTTAGATACATT +
Preference number: 6 (lower is better)
Translates to: SRRPTSKASLSV*DLDVVKHVRYI
Trigger: AATGTATCTAACGTGCTTGACCACGTCAAGATCCCAGACAGATAAACTTGCCTTTGATGTAGGTCTGCGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CGTCAAAAACCAGACGACGCAGGAGTTGCTGTAACATaGAAGGTCTCAAATGATTGCAAATGGCTAGCAAAC +
Preference number: 6 (lower is better)
Translates to: RQKPDDAGVAVT*KVSNDCKWLAN
Trigger: GTTTGCTAGCCATTTGCAATCATTTGAGACCTTCCATGTTACAGCAACTCCTGCGTCGTCTGGTTTTTGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CATCCTCACCACTCTGACAGCTCTTGGCCATCATGCTaGAATAGGAAGTGTACAATGGATCATCTTCCAATT +
Preference number: 6 (lower is better)
Translates to: HPHHSDSSWPSC*NRKCTMDHLPI
Trigger: AATTGGAAGATGATCCATTGTACACTTCCTATTCCAGCATGATGGCCAAGAGCTGTCAGAGTGGTGAGGATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TTTTGTCTGTTCTTTAGAGAGCGGAGCTTATTCTGTTaGTCTTCATGTTGCATCTCGTCCTCTGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: FCLFFRERSLFC*SSCCISSSGGW
Trigger: CCAGCCACCAGAGGACGAGATGCAACATGAAGACAAACAGAATAAGCTCCGCTCTCTAAAGAACAGACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TCCACCTGGTCGATAATTAACTCAAAGTACCACTTCTaGTACTGTGGTGAACCTTCAGCAACTCCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: STWSIINSKYHF*YCGEPSATPRK
Trigger: CTTCCTGGGAGTTGCTGAAGGTTCACCACAGTACAAGAAGTGGTACTTTGAGTTAATTATCGACCAGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TCTGCTGGGTCCAACAGACTCTTGAGACGGGAATCGTaGGGCATATGTTCAGAGAGATTTGTCAATAACACT +
Preference number: 6 (lower is better)
Translates to: SAGSNRLLRRES*GICSERFVNNT
Trigger: AGTGTTATTGACAAATCTCTCTGAACATATGCCCAACGATTCCCGTCTCAAGAGTCTGTTGGACCCAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp CTCCTTGTGAATGTTTGCAATGCACTGGAGTACAACTTCATCCTCTaGCATTGGGAAGCAGGGGTCATAGAAGTTAAACGGTCTGTAATG +
Preference number: 6 (lower is better)
Translates to: LLVNVCNALEYNFIL*HWEAGVIEVKRSVM
Trigger: CATTACAGACCGTTTAACTTCTATGACCCCTGCTTCCCAATGCAAGAGGATGAAGTTGTACTCCAGTGCATTGCAAACATTCACAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091818.6
CDS TCA 72 bp TATGTTCAGAGAGATTTGTCAATAACACTGCCACATTaGACCCTATGTCCTTGGCTGGCTCATGGAACCTCT +
Preference number: 6 (lower is better)
Translates to: YVQRDLSITLPH*TLCPWLAHGTS
Trigger: AGAGGTTCCATGAGCCAGCCAAGGACATAGGGTTCAATGTGGCAGTGTTATTGACAAATCTCTCTGAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp CTTCTTTCTTGGAGTGGATTCCAAAGAGGTCTGACATaGTGTCTGTATCTCCTGCCTCACCCTTTACAAAGT +
Preference number: 6 (lower is better)
Translates to: LLSWSGFQRGLT*CLYLLPHPLQS
Trigger: ACTTTGTAAAGGGTGAGGCAGGAGATACAGACATCATGTCAGACCTCTTTGGAATCCACTCCAAGAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp AGTGTGCTACACTATTGTAGATGTTTAATCGATCAATaGAATTCAATACGAGGGCCAGCATCCCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SVLHYCRCLIDQ*NSIRGPASPPP
Trigger: AGGAGGAGGGGATGCTGGCCCTCGTATTGAATTGCATTGATCGATTAAACATCTACAATAGTGTAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp ACATTAGTGGATGATTCTACCAGCGTGTCAACCATCTaGTTTCCGATAGTCCCATTTACCACATTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: TLVDDSTSVSTI*FPIVPFTTFPS
Trigger: GGAAGGAAATGTGGTAAATGGGACTATCGGAAAGCAGATGGTTGACACGCTGGTAGAATCATCCACTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp CACCCTCCTGTGCTGAGAATCATTCTGATCTGTAGATaGTATCGTCAAACATTCATCATGACCGTGGAAAAG +
Preference number: 6 (lower is better)
Translates to: HPPVLRIILICR*YRQTFIMTVEK
Trigger: CTTTTCCACGGTCATGATGAATGTTTGACGATACCATCTACAGATCAGAATGATTCTCAGCACAGGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CCA 72 bp AGATGTGTAGGCTCTGCTGTTAGGAAAGGCTCCACCTaGTCGATAATTAACTCAAAGTACCACTTCTTGTAC +
Preference number: 6 (lower is better)
Translates to: RCVGSAVRKGST*SIINSKYHFLY
Trigger: GTACAAGAAGTGGTACTTTGAGTTAATTATCGACCAGGTGGAGCCTTTCCTAACAGCAGAGCCTACACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp TCTGCAGGTTATAATTCTTCTCAGTTTCAGGGAGCTTaGAAAACTCCACAAGGCAGGGATGCTGCCTTTTGT +
Preference number: 6 (lower is better)
Translates to: SAGYNSSQFQGA*KTPQGRDAAFC
Trigger: ACAAAAGGCAGCATCCCTGCCTTGTGGAGTTTTCAAAGCTCCCTGAAACTGAGAAGAATTATAACCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp ATATGTTCAGAGAGATTTGTCAATAACACTGCCACATaGAACCCTATGTCCTTGGCTGGCTCATGGAACCTC +
Preference number: 6 (lower is better)
Translates to: ICSERFVNNTAT*NPMSLAGSWNL
Trigger: GAGGTTCCATGAGCCAGCCAAGGACATAGGGTTCAATGTGGCAGTGTTATTGACAAATCTCTCTGAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp GTACCCAATAGATCTCTCACACCATCAGCATCACGCTTATATTCTTaGACAGGCTCCAATCTCATCTTCTCCTTAGGAAGTAAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: VPNRSLTPSASRLYS*TGSNLIFSLGSKAS
Trigger: TGAAGCCTTACTTCCTAAGGAGAAGATGAGATTGGAGCCTGTCAAAGAATATAAGCGTGATGCTGATGGTGTGAGAGATCTATTGGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TCTTCCGGCCTGTCAGTTGAGTCAGATTCTGAGATCTaGGATGCTAATTGCATCTCAAAGATTGTATCCTCA +
Preference number: 6 (lower is better)
Translates to: SSGLSVESDSEI*DANCISKIVSS
Trigger: TGAGGATACAATCTTTGAGATGCAATTAGCATCTCAGATCTCAGAATCTGACTCAACTGACAGGCCGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS GCA 72 bp CTATTAGGTTTAAGGCTTCTGGGCTTTCAATCAAGATaGAGTGCAAGACCTCCAAGATACCTGAGGAAGATT +
Preference number: 6 (lower is better)
Translates to: LLGLRLLGFQSR*SARPPRYLRKI
Trigger: AATCTTCCTCAGGTATCTTGGAGGTCTTGCACTGCATCTTGATTGAAAGCCCAGAAGCCTTAAACCTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp AGATCTCTCACACCATCAGCATCACGCTTATATTCTTaGACAGGCTCCAATCTCATCTTCTCCTTAGGAAGT +
Preference number: 6 (lower is better)
Translates to: RSLTPSASRLYS*TGSNLIFSLGS
Trigger: ACTTCCTAAGGAGAAGATGAGATTGGAGCCTGTCAAAGAATATAAGCGTGATGCTGATGGTGTGAGAGATCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 72 bp ACTGCTGACAATGGCTTCCAAGTGAGCAATAAACTCTaGAGCAGCGTCAACATACTTCAGGATCTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: TADNGFQVSNKL*SSVNILQDLLQ
Trigger: TTGAAGAAGATCCTGAAGTATGTTGACGCTGCTCAAGAGTTTATTGCTCACTTGGAAGCCATTGTCAGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS CAA 90 bp CTGTATTGTTTCCTGAGGTTCTTCAAGGTTGCCCTCTTCAGAAACTaGGTGACATTTCTCTTTACTGAGACACAGGCCATAGTAAAAGCA +
Preference number: 6 (lower is better)
Translates to: LYCFLRFFKVALFRN*VTFLFTETQAIVKA
Trigger: TGCTTTTACTATGGCCTGTGTCTCAGTAAAGAGAAATGTCACCAAGTTTCTGAAGAGGGCAACCTTGAAGAACCTCAGGAAACAATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp TTGCATAAAGGAGGCATCCACTTGGATGCTACCATTTaGTATCGAGAGATGAAGATATCTTTCAGAGGACAC +
Preference number: 6 (lower is better)
Translates to: LHKGGIHLDATI*YREMKISFRGH
Trigger: GTGTCCTCTGAAAGATATCTTCATCTCTCGATATCAAATGGTAGCATCCAAGTGGATGCCTCCTTTATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2
CDS TCA 72 bp AACTTACTAATTAACCAATCAAGGTTATTGGAGAATTaGGCACAATTGTTTCTGTTTCCACGTATGAGAGCG +
Preference number: 6 (lower is better)
Translates to: NLLINQSRLLEN*AQLFLFPRMRA
Trigger: CGCTCTCATACGTGGAAACAGAAACAATTGTGCTCAATTCTCCAATAACCTTGATTGGTTAATTAGTAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080673.13
ENSMUST00000091818.6
ENSMUST00000134358.9
ENSMUST00000208151.2
ENSMUST00000208290.2