RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RYR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030592

Ensembl transcript IDs: ENSMUST00000032813.10, ENSMUST00000179893.9, ENSMUST00000214374.2

Found 1633 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAGTGGAGAAGGCACTTaGGGTGGGGGAGGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASGEGT*GGGGPA
Trigger: AGCTGGCCCTCCCCCACCTCAAGTGCCTTCTCCACT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
3UTR-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCAGTGGAGAAGGCACTaGAGGTGGGGGAGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRQWRRH*RWGRAS
Trigger: GCTGGCCCTCCCCCACCTCAAGTGCCTTCTCCACTG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGACCGCTGTACAGGGTaGCGGGGCGCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGDRCTG*RGARRQ
Trigger: CTGCCTGCGGGCGCCCCGCCACCCTGTACAGCGGTC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGTGAGAGGCAGCGACTaGGGCCCACCAGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGVRGSD*GPPGGA
Trigger: GGCCCCACCTGGTGGGCCCCAGTCGCTGCCTCTCAC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGCACCTCGTCGCCGGTaGGGTCCGGCATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRAPRRR*GPACLP
Trigger: TGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCAGGTGGGAAAAGCGTaGTGGCGCGGGTCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRQVGKA*WRGSPA
Trigger: CGCCGGAGACCCGCGCCATCACGCTTTTCCCACCTG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCGGTGGGGTCCGGCATaGCTGCCAGGAGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRRWGPA*LPGAPS
Trigger: TGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCTGTGTCCCCCGCCCTaGGATGACTCCACACCGGCC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGLCPPP*DDSTPA
Trigger: GGCCGGTGTGGAGTCATCCCAGGGCGGGGGACACAG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGCCTCTACCCCAGCCTaGGCAGTGCCTCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRASTPA*AVPPGV
Trigger: GACACCCGGAGGCACTGCCCAGGCTGGGGTAGAGGC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCGCAGGCGCGGGTCGTaGGGCACATGCTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRRRRGS*GTCSDR
Trigger: CCTGTCAGAGCATGTGCCCCACGACCCGCGCCTGCG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCATAGGGAGCGGGCATaGGTGCACACAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRHRERA*VHTGPP
Trigger: GGGAGGGCCTGTGTGCACTCATGCCCGCTCCCTATG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCGCGGGTCTCCGGCGTaGGTGGCACGATGTACTCAG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGRGSPA*VARCTQ
Trigger: CTGAGTACATCGTGCCACTCACGCCGGAGACCCGCG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCATGGAGTCCACCATaGTGGCGCGGTGCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGAWSPP*WRGARC
Trigger: GCACCGAGCACCGCGCCATCATGGTGGACTCCATGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGGGAGCGGGCATGAGTaGACACAGGCCCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRGSGHE*TQALPR
Trigger: ACGAGGGAGGGCCTGTGTGCACTCATGCCCGCTCCC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGACGACATCGCCCGACTaGCAGGGGCGCCCAAATGGC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGTTSPD*QGRPNG
Trigger: GCCATTTGGGCGCCCCTGGCAGTCGGGCGATGTCGT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCGCCCTCTGCATCGCTaGCAGCGCCGCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWRPLHR*QRRSAA
Trigger: AGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCTGCACCTCCAGCCTTaGTGGGCACTGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLHLQP*WALWGW
Trigger: CCAGCCCCACAGTGCCCACCAAGGCTGGAGGTGCAG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCGGCTCACAATGGGCTaGGCAAACACGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGRLTMG*ANTASR
Trigger: GCGGCTGGCCGTGTTTGCCCAGCCCATTGTGAGCCG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCGGCTCACAATGGGCTaGGCAAACACGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRRLTMG*ANTASR
Trigger: GCGGCTGGCCGTGTTTGCCCAGCCCATTGTGAGCCG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCCTCCCGTGCCAGCCTaGTCCGCTGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRPPVPA*SAAASS
Trigger: TGAAGAGGCTGCAGCGGACCAGGCTGGCACGGGAGG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGAGCGGCTCCTGGCACTaGACTGCCCAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRSGSWH*TAQPSR
Trigger: GCGGCTGGGCTGGGCAGTTCAGTGCCAGGAGCCGCT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGGCAGCCAGCAGCCCTaGGCCACCCTCACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHGSQQP*ATLTPQ
Trigger: CTGAGGGGTGAGGGTGGCTCAGGGCTGCTGGCTGCC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGCCTCTCGAAGGCATTaGGGTCCAGGACGCTGCACG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRASRRH*GPGRCT
Trigger: CGTGCAGCGTCCTGGACCTCAATGCCTTCGAGAGGC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCAGCACCGCCACGTTaGAGCCAATGTCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGAAPPR*SQCPVL
Trigger: CAGCACGGGACATTGGCTTCAACGTGGCGGTGCTGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAAGGGTGTGGAGCCCTaGATGCCCAGGCCAATGCCG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRKGVEP*MPRPMP
Trigger: CGGCATTGGCCTGGGCATGCAGGGCTCCACACCCTT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCATCTCTGTGTAGCGTaGTCCGGACTCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGHLCVA*SGLGQP
Trigger: GGGCTGGCCGAGTCCGGAGCACGCTACACAGAGATG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCCCTCGCAGAGCAGCTaGAGGAAGCGGAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGPSQSS*RKRNRS
Trigger: GGACCTGTTCCGCTTCCTGCAGCTGCTCTGCGAGGG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTCTCCTCCACGCTGTTaGGAAGCCCCAGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSPPRC*EAPGWP
Trigger: GGGCCATCCTGGGGCTTCCCAACAGCGTGGAGGAGA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGACCGCTGTACAGGGTaGCGGGGCGCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWDRCTG*RGARRQ
Trigger: CTGCCTGCGGGCGCCCCGCCACCCTGTACAGCGGTC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGTAGGAGCTCCGGCCTaGCACGGCTCACAATGGGCT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRVGAPA*HGSQWA
Trigger: AGCCCATTGTGAGCCGTGCCAGGCCGGAGCTCCTAC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCGAGCCTTCTGGCGTaGGGGGCTCCACTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVASLLA*GAPLAS
Trigger: CGACGCCAGTGGAGCCCCCCACGCCAGAAGGCTCGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCCCCCGCCCTGGGATaGCTCCACACCGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSPALG*LHTGLH
Trigger: GTGGAGGCCGGTGTGGAGTCATCCCAGGGCGGGGGA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCGGCTCCTGGCACTaGACTGCCCAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWSGSWH*TAQPSR
Trigger: GCGGCTGGGCTGGGCAGTTCAGTGCCAGGAGCCGCT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCGCGGGTCTCCGGCGTaGGTGGCACGATGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWRGSPA*VARCTQ
Trigger: CTGAGTACATCGTGCCACTCACGCCGGAGACCCGCG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTCTCAGGGAGGTTGTaGCCCCAACGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWVSGRL*PQRQAG
Trigger: GCCTGCCTGGCGTTGGGGTCACAACCTCCCTGAGAC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGAGGGATGGCAGGGCTaGGGCGAGCCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHEGWQG*GEPELL
Trigger: CAGAAGCTCCGGCTCGCCTCAGCCCTGCCATCCCTC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGGCAGCCAGCAGCCCTaGGCCACCCTCACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGGSQQP*ATLTPQ
Trigger: CTGAGGGGTGAGGGTGGCTCAGGGCTGCTGGCTGCC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGCGGGCATGAGTaGACACAGGCCCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWGSGHE*TQALPR
Trigger: ACGAGGGAGGGCCTGTGTGCACTCATGCCCGCTCCC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGACGACATCGCCCGACTaGCAGGGGCGCCCAAATGGC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWTTSPD*QGRPNG
Trigger: GCCATTTGGGCGCCCCTGGCAGTCGGGCGATGTCGT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTGTGGCCCCTGCGGTaGAGCGGAAGTGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWVWPLR*SGSAGG
Trigger: TCCACCAGCACTTCCGCTGCACCGCAGGGGCCACAC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTGGCAGTTCCATCCTTaGCCCCTTCAGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGWQFHP*PLQPLP
Trigger: GGGGAGAGGCTGAAGGGGGCAAGGATGGAACTGCCA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCTGGTCCACGTGGCTaGACAGGGCATGAGCCACGC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPGPRG*TGHEPR
Trigger: GCGTGGCTCATGCCCTGTGCAGCCACGTGGACCAGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCTTGTGCTCCTCAGGTaGCGGCTCCTCCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLVLLR*RLLLRL
Trigger: AAGCCTGAGGAGGAGCCGGCACCTGAGGAGCACAAG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGAGGTAGCGGTTCAGTaGCAGCGCCATCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGEVAVQ*QRHLRG
Trigger: ACCACGGAGATGGCGCTGGCACTGAACCGCTACCTC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGACCATGATGGCGCGGTaGTCGGTGCCCGCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGTMMAR*SVPAKS
Trigger: ACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAGGCATGGCCACCACTaGCCAGCACTTTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRRHGHH*PALWLV
Trigger: CACCAGCCAAAGTGCTGGGCAGTGGTGGCCATGCCT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCCACGCCCTTCACCTaGGTGCGCGCCTGCGACACC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPTPFT*VRACDT
Trigger: GGTGTCGCAGGCGCGCACGCAGGTGAAGGGCGTGGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCCAGCTCCAGGAAGTTaGGCAGGCGCGGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVPAPGS*AGAGRG
Trigger: CCCACGACCCGCGCCTGCGCAACTTCCTGGAGCTGG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCCAGCTCCAGGAAGTTaGGCAGGCGCGGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHPAPGS*AGAGRG
Trigger: CCCACGACCCGCGCCTGCGCAACTTCCTGGAGCTGG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCGGTGGGGTCCGGCATaGCTGCCAGGAGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRWGPA*LPGAPS
Trigger: TGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCGTGCCGGAGCAGGATaGCGTGGCCATACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGRAGAG*RGHTRV
Trigger: CACTCTTGTATGGCCACGCCATCCTGCTCCGGCACG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTGGCCCCGAGCCCCGTaGCTTCCCGCTGAAGCTATC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWWPRAP*LPAEAI
Trigger: GATAGCTTCAGCGGGAAGCCACGGGGCTCGGGGCCA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGCAGGCTGCGCAGCTTaGTCTGCTTCTCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRAGCAA*SASPRA
Trigger: AGCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGCCTCTACCCCAGCCTaGGCAGTGCCTCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHASTPA*AVPPGV
Trigger: GACACCCGGAGGCACTGCCCAGGCTGGGGTAGAGGC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTGCAACAGCTGTGCCTaGTCCACGTGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRCNSCA*STWLHR
Trigger: CCTGTGCAGCCACGTGGACCAGGCACAGCTGTTGCA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTGTACTCAGAGAGCATaGAGCGACGGCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRCTQRA*SDGCGR
Trigger: CCTGCCGCAGCCGTCGCTCCATGCTCTCTGAGTACA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTGTGGCCCCAGCAGCTaGCAGGGCGACCACAAAACA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRCGPSS*QGDHKT
Trigger: TGTTTTGTGGTCGCCCTGCCAGCTGCTGGGGCCACA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGAGCCGGAGCTTCTGTaGCCCCAGCAGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHEPELL*PQQLAG
Trigger: CCCTGCCAGCTGCTGGGGCCACAGAAGCTCCGGCTC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAGCACCGGGACGAACTaGAACTCCACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSTGTN*NSTEPP
Trigger: TGGGGGCTCTGTGGAGTTCCAGTTCGTCCCGGTGCT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGGTGCCCGCAAAGAGTaGCGCGCACTTGGTGATGAG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRGARKE*RALGDE
Trigger: CTCATCACCAAGTGCGCGCCACTCTTTGCGGGCACC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGCAGGTGCTGCAGCATaGACGGGCGGATATACCTGC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRAGAAA*TGGYTC
Trigger: GCAGGTATATCCGCCCGTCCATGCTGCAGCACCTGC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCCAATGTCCCGTGCTaGTTCCTGGAAGCGGTTCGC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGANVPC*FLEAVR
Trigger: GCGAACCGCTTCCAGGAACCAGCACGGGACATTGGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCGCAGGCGCGGGTCGTaGGGCACATGCTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRRRRGS*GTCSDR
Trigger: CCTGTCAGAGCATGTGCCCCACGACCCGCGCCTGCG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGCGAGCCTTCTGGCGTaGGGGGCTCCACTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRASLLA*GAPLAS
Trigger: CGACGCCAGTGGAGCCCCCCACGCCAGAAGGCTCGC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGACTTCAGCTGTTCCTTaGGCACCGTGGCGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGTSAVP*APWRCT
Trigger: AGTGCAGCGCCACGGTGCTCAAGGAACAGCTGAAGT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCTGCAGGGCTCGAACTaGCAGAGACTGCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLQGSN*QRLLQD
Trigger: ATCCTGGAGCAGTCTCTGTCAGTTCGAGCCCTGCAG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACACGCAGCTGGGCTCCTaGCCCGCGAAGACCCTCACA +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHTQLGS*PAKTLT
Trigger: TGTGAGGGTCTTCGCGGGTCAGGAGCCCAGCTGCGT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGACGCAGCTGGGCTCCTaGCCCGCGAAGACCCTCACA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRTQLGS*PAKTLT
Trigger: TGTGAGGGTCTTCGCGGGTCAGGAGCCCAGCTGCGT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCGGCTCCTGGCACTaGACTGCCCAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESGSWH*TAQPSR
Trigger: GCGGCTGGGCTGGGCAGTTCAGTGCCAGGAGCCGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGAGGGATGGCAGGGCTaGGGCGAGCCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWEGWQG*GEPELL
Trigger: CAGAAGCTCCGGCTCGCCTCAGCCCTGCCATCCCTC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCATGGAGTCCACCATaGTGGCGCGGTGCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVAWSPP*WRGARC
Trigger: GCACCGAGCACCGCGCCATCATGGTGGACTCCATGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACGCGCTGTGCTTTGGTaGGCGAGCGGCCCCGCGACA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRAVLW*ASGPAT
Trigger: TGTCGCGGGGCCGCTCGCTCACCAAAGCACAGCGCG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTGCTTTGAGGCTGGGTaGATCGTCCACCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGCFEAG*IVHQQA
Trigger: GGCCTGTTGGTGGACGATGCACCCAGCCTCAAAGCA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTGCTTTGAGGCTGGGTaGATCGTCCACCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRCFEAG*IVHQQA
Trigger: GGCCTGTTGGTGGACGATGCACCCAGCCTCAAAGCA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGATTGTGCCCGTTCTCTaGCAGCCGGTCCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRIVPVL*QPVHQS
Trigger: ACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAAT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTAGCTCCAGCCTTGTaGCACGCGGTCTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWVAPAL*HAVSRP
Trigger: TGGGCGAGAGACCGCGTGGCACAAGGCTGGAGCTAC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCCCAAATGGCTCACTaGCCAAGTGCCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWAQMAH*PSASAG
Trigger: GCCAGCGCTGGCACTTGGGCAGTGAGCCATTTGGGC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCGGTGCAGCGGAAGTaGTGGTGGAACTGGACCGGA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWAVQRK*WWNWTG
Trigger: TCCGGTCCAGTTCCACCAGCACTTCCGCTGCACCGC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGAGGTCGTAGTAGCCTaGTCGCAGAGGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGREVVVA*SQRTWQ
Trigger: TTGCCAGGTCCTCTGCGAGCAGGCTACTACGACCTC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAAGGACTCCACCCGGTaGTGCAGCTCTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGKDSTR*CSSWSQ
Trigger: CTGTGACCAAGAGCTGCAGCACCGGGTGGAGTCCTT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTCCTGGGGACCCATCTaGACAATGAGCAGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGSWGPI*TMSSER
Trigger: CCGCTCACTGCTCATTGTGCAGATGGGTCCCCAGGA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGATCCAGCGAAGCAGCTaGTGCAGGAAGCCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRIQRSS*CRKPKA
Trigger: TGCCTTCGGCTTCCTGCAGCAGCTGCTTCGCTGGAT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCGCCCTTCACCTGCGTaGGCGCCTGCGACACCTTTC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRPSPA*APATPF
Trigger: GAAAGGTGTCGCAGGCGCGCACGCAGGTGAAGGGCG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACCCACGCCCTTCACCTaGGTGCGCGCCTGCGACACC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEPTPFT*VRACDT
Trigger: GGTGTCGCAGGCGCGCACGCAGGTGAAGGGCGTGGG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTCGTCTCCGAACTGGTaGTGGGCGATGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSSPNW*WAMCWK
Trigger: CTTCCAGCACATCGCCCAGCACCAGTTCGGAGACGA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCATCTCTGTGTAGCGTaGTCCGGACTCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWHLCVA*SGLGQP
Trigger: GGGCTGGCCGAGTCCGGAGCACGCTACACAGAGATG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTCCCAGAGGCGACTGTaGGCCAGACTCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSQRRL*ARLCWF
Trigger: AAACCAGCAGAGTCTGGCGCACAGTCGCCTCTGGGA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGGGTCGTGGGGCACATaGTCTGACAGGTTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGGSWGT*SDRLVS
Trigger: GCTTACCAACCTGTCAGAGCATGTGCCCCACGACCC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGACCACCACAAGGCCTTaGTCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRTTTRP*SSVSPR
Trigger: CCTTGGGCTCACTGAGGACCAAGGCCTTGTGGTGGT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTGGTGTGGGCCTTGCTaGCATCAACCACCACAAGGC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRWCGPC*HQPPQG
Trigger: GCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACCA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTGGCCCCGAGCCCCGTaGCTTCCCGCTGAAGCTATC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVWPRAP*LPAEAI
Trigger: GATAGCTTCAGCGGGAAGCCACGGGGCTCGGGGCCA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCGTCAGCCTCACGTaGCTCAGGTCCAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGVSLT*LRSRGA
Trigger: GGCTCCTCTGGACCTGAGCCACGTGAGGCTGACGCC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCCTATTGCTGCGCTTaGTGGCCTCGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPYCCA*WPRPAG
Trigger: GCCTGCTGGACGAGGCCACCAAGCGCAGCAATAGGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAGGGAGCTCACATCCTaGCCCAGGTTCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWRELTS*PRFRWP
Trigger: GGGCCACCTGAACCTGGGCCAGGATGTGAGCTCCCT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAAGTGCTGGTGGAACTaGACCGGAAGGCTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRKCWWN*TGRLSR
Trigger: CCGGCTAAGCCTTCCGGTCCAGTTCCACCAGCACTT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAACTGGACCACGTTCTaGTGGGTGGGCAGCACGAAG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGNWTTF*WVGSTK
Trigger: CTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCTGCACCTCCAGCCTTaGTGGGCACTGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVLHLQP*WALWGW
Trigger: CCAGCCCCACAGTGCCCACCAAGGCTGGAGGTGCAG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCACGGGGGTGAGAAATaGTGTGGAGGTCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGHGGEK*CGGLRE
Trigger: CTCCCTGAGACCTCCACACCATTTCTCACCCCCGTG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTCAGGTGGTCAAACATaGAGCGCTGGTTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGSGGQT*SAGSAG
Trigger: GCCGGCAGAACCAGCGCTCCATGTTTGACCACCTGA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCTCCAGGAATGCCACTaGCATGGCTGCGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHLQECH*HGCGQA
Trigger: CGCCTGGCCGCAGCCATGCCAGTGGCATTCCTGGAG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCGGCTCACAATGGGCTaGGCAAACACGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHRLTMG*ANTASR
Trigger: GCGGCTGGCCGTGTTTGCCCAGCCCATTGTGAGCCG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGATGGTAGGGATGAAGTaGGAGCGTAGGAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRMVGMK*ERRSSG
Trigger: GCCGGAGCTCCTACGCTCCCACTTCATCCCTACCAT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCCCGGCGCTTCTTCTTaGTGCGTTCCTGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRPGASS*CVPDLS
Trigger: GCTCAGATCAGGAACGCACCAAGAAGAAGCGCCGGG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCGCAGGCGCGGGTCGTaGGGCACATGCTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRRRGS*GTCSDR
Trigger: CCTGTCAGAGCATGTGCCCCACGACCCGCGCCTGCG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCACCTCGTCGCCGGTaGGGTCCGGCATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRAPRRR*GPACLP
Trigger: TGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCGAGCCTTCTGGCGTaGGGGGCTCCACTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRASLLA*GAPLAS
Trigger: CGACGCCAGTGGAGCCCCCCACGCCAGAAGGCTCGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTGGATCGGGAGGTGGTaGGGCAACTCAGGTACATAC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGWIGRW*GNSGTY
Trigger: GTATGTACCTGAGTTGCCTCACCACCTCCCGATCCA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTTCAGACCTCTGCTTTaGGGCTGGGTGCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGFRPLL*GWVHRP
Trigger: TGGACGATGCACCCAGCCTCAAAGCAGAGGTCTGAA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCATAGGGAGCGGGCATaGGTGCACACAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWHRERA*VHTGPP
Trigger: GGGAGGGCCTGTGTGCACTCATGCCCGCTCCCTATG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCATAGGGAGCGGGCATaGGTGCACACAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRHRERA*VHTGPP
Trigger: GGGAGGGCCTGTGTGCACTCATGCCCGCTCCCTATG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGCTTCCACTCCAGCTaGTTCTCAGCGGCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWGFHSS*FSAALA
Trigger: GGCTAGAGCCGCTGAGAATCAGCTGGAGTGGAAGCC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCTGGGGCAGCATAGGTaGGCCACAGGCCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLGQHR*ATGLRP
Trigger: TGGCCTCAGGCCTGTGGCTCACCTATGCTGCCCCAG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCTCGAAGTAGCCAATaGGGTCCTGTAGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGARSSQ*GPVGSG
Trigger: TCCTGAGCCTACAGGACCTCATTGGCTACTTCGAGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTCAGGTGGGTGGCCTaGGCTGTCAGAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWLRWVA*AVRNGA
Trigger: GGCTCCATTTCTGACAGCTCAGGCCACCCACCTGAG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCACGGGGCAGCCGTTaGTACGAAAGGAGATGGACG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWARGSR*YERRWT
Trigger: CGTCCATCTCCTTTCGTATCAACGGCTGCCCCGTGC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGATGGTAGTCAGGAGTaGCCCAGCCCACCCACACGC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHDGSQE*PSPPTR
Trigger: GCGTGTGGGTGGGCTGGGTCACTCCTGACTACCATC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCAAGGTCTGTGTGGCTaGTTCGGCCCTGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHQGLCG*FGPAVR
Trigger: CCGGACAGCAGGGCCGAATCAGCCACACAGACCTTG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACAGGTGGGAAAAGCGTaGTGGCGCGGGTCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEQVGKA*WRGSPA
Trigger: CGCCGGAGACCCGCGCCATCACGCTTTTCCCACCTG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGAGGGATGGCAGGGCTaGGGCGAGCCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWREGWQG*GEPELL
Trigger: CAGAAGCTCCGGCTCGCCTCAGCCCTGCCATCCCTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAACCAGCTCCGGGCTCTaGACGAAGTCCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGTSSGL*TKSSWA
Trigger: GGCCCAGGAGGACTTCGTTCAGAGCCCGGAGCTGGT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGACCAGCTCCGGGCTCTaGACGAAGTCCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRTSSGL*TKSSWA
Trigger: GGCCCAGGAGGACTTCGTTCAGAGCCCGGAGCTGGT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTGCACAATGAGCAGTaGGCGGATCTGGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWLHNEQ*ADLAQA
Trigger: TGCCTGGGCCAGATCCGCTCACTGCTCATTGTGCAG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGCATGGAGTCCACCATaGTGGCGCGGTGCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWAWSPP*WRGARC
Trigger: GCACCGAGCACCGCGCCATCATGGTGGACTCCATGC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTCTTCCTCAGAGGTaGCCCCGAAGTTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVALPQR*PRSWPS
Trigger: GCTGGGCCAACTTCGGGGTCACCTCTGAGGAAGAGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTTCTTGGTGCGTTCCTaGTCTGAGCCACCTGACTGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRFLVRS*SEPPDW
Trigger: CCAGTCAGGTGGCTCAGATCAGGAACGCACCAAGAA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032813.10
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGACGCGATGCGCCCATaGTTTCGATGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVDAMRP*FRCGPG
Trigger: ACCTGGGCCGCATCGAAATCATGGGCGCATCGCGTC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTCAGGCTCGGAGATCTaGGCTGCGATCTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSGSEI*AAICIS
Trigger: TGAGATGCAGATCGCAGCTCAGATCTCCGAGCCTGA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTGGTGCGGAGCGTCTTaGCTCCCATGGCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWWCGAS*LPWRCP
Trigger: TGGACATCGCCATGGGAGTCAAGACGCTCCGCACCA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTTGGCCAGCATCTCCTaGAGGGCTCGAACTGACAGA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLASIS*RARTDR
Trigger: TCTGTCAGTTCGAGCCCTGCAGGAGATGCTGGCCAA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGTAGCTCCAGCCTTGTaGCACGCGGTCTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHVAPAL*HAVSRP
Trigger: TGGGCGAGAGACCGCGTGGCACAAGGCTGGAGCTAC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTCTCAGCTCAGGCCTTaGCCAGCCCACTCGCATCTC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWSQLRP*PAHSHL
Trigger: GAGATGCGAGTGGGCTGGGCAAGGCCTGAGCTGAGA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGGCTCACTGCCCAAGTaGCAGCGCTGGCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRGSLPK*QRWPRC
Trigger: GCATCGAGGCCAGCGCTGGCACTTGGGCAGTGAGCC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGCTCACTGCCCAAGTaGCAGCGCTGGCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGSLPK*QRWPRC
Trigger: GCATCGAGGCCAGCGCTGGCACTTGGGCAGTGAGCC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGCCCAAATGGCTCACTaGCCAAGTGCCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRAQMAH*PSASAG
Trigger: GCCAGCGCTGGCACTTGGGCAGTGAGCCATTTGGGC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGTGGTAACTGGGCGTTaGATGTTGATGGCGAACGGC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRVVTGR*MLMANG
Trigger: GCCGTTCGCCATCAACATGCAACGCCCAGTTACCAC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCGAGCCCGTCATACTaGCGATGCAGGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPSPSY*RCRRLN
Trigger: GTTCAGCCTCCTGCATCGGCAGTATGACGGGCTCGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCCAGGGTGGGGATCTaGAGTGGGAGGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPRVGI*SGRLMM
Trigger: CATCATCAGCCTCCCACTGCAGATCCCCACCCTGGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCGTCCTCGTTCACCATaGCCAGCCCCTCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWRPRSP*PAPLPC
Trigger: ACAAGGCAGAGGGGCTGGGCATGGTGAACGAGGACG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTGTGCGCCAGACTCTaGTGGTTTCCGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWLCARL*WFPVQG
Trigger: ACCCTGCACCGGAAACCAGCAGAGTCTGGCGCACAG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGATGTGCGCGAACACGTaGAGGAAGCCCACCACGGCA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWMCANT*RKPTTA
Trigger: TGCCGTGGTGGGCTTCCTGCACGTGTTCGCGCACAT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGAAGCCAATGTCCCGTaGTGGTTCCTGGAAGCGGTT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGREANVP*WFLEAV
Trigger: AACCGCTTCCAGGAACCAGCACGGGACATTGGCTTC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCAGCTCCAGGAAGTTaGGCAGGCGCGGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPAPGS*AGAGRG
Trigger: CCCACGACCCGCGCCTGCGCAACTTCCTGGAGCTGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCGCCCTCTGCATCGCTaGCAGCGCCGCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQRPLHR*QRRSAA
Trigger: AGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGCTCCATGTAGCCGGTaGTCTCCTCCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRAPCSR*SPPGSS
Trigger: ACTACTTCCTGGAGGAGAGCACCGGCTACATGGAGC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGAGAGGCCAGATCCATaGCCAGCAGCTCCGCAATCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWERPDP*PAAPQS
Trigger: GGATTGCGGAGCTGCTGGGCATGGATCTGGCCTCTC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTCCGTCCGCAAAAACTaGACCTCGTCCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGSVRKN*TSSSPS
Trigger: TGAAGGCGAGGACGAGGTCCAGTTTTTGCGGACGGA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTCTGCGCGTTGCTGGTaGGTTCCAGAAAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSARCW*VPESKG
Trigger: GCCTTTGCTTTCTGGAACCCACCAGCAACGCGCAGA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACTGTGTCCCCCGCCCTaGGATGACTCCACACCGGCC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGELCPPP*DDSTPA
Trigger: GGCCGGTGTGGAGTCATCCCAGGGCGGGGGACACAG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCAGGGCCTTAGGGTCTaGGGCAGCATAGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWQGLRV*GSIGEP
Trigger: TGGCTCACCTATGCTGCCCCAGACCCTAAGGCCCTG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGTGAGAGGCAGCGACTaGGGCCCACCAGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQVRGSD*GPPGGA
Trigger: GGCCCCACCTGGTGGGCCCCAGTCGCTGCCTCTCAC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCCCTATTGCTGCGCTTaGTGGCCTCGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHPYCCA*WPRPAG
Trigger: GCCTGCTGGACGAGGCCACCAAGCGCAGCAATAGGG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCTGTCCACCTGACTaGGCTCCTGGTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGCPPD*APGQEA
Trigger: AGCCTCCTGACCAGGAGCCCAGTCAGGTGGACAGCC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCCAGGGGCGCCCAAATaGCTCACTGCCCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVPGAPK*LTAQVP
Trigger: TGGCACTTGGGCAGTGAGCCATTTGGGCGCCCCTGG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCCTCTACCCCAGCCTaGGCAGTGCCTCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRASTPA*AVPPGV
Trigger: GACACCCGGAGGCACTGCCCAGGCTGGGGTAGAGGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCACTGTGGGGCTaGGTTCTTGCGCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRWALWG*VLALAQ
Trigger: CTGAGCGAGCGCAAGAACCCAGCCCCACAGTGCCCA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTGGGCACTGTGGGGCTaGGTTCTTGCGCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHWALWG*VLALAQ
Trigger: CTGAGCGAGCGCAAGAACCCAGCCCCACAGTGCCCA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTGTGGCCCCAGCAGCTaGCAGGGCGACCACAAAACA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWCGPSS*QGDHKT
Trigger: TGTTTTGTGGTCGCCCTGCCAGCTGCTGGGGCCACA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCCTCAGAGATTCGGATaGCCTCTTCGATGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGPQRFG*PLRWQP
Trigger: TGGCTGCCATCGAAGAGGCCATCCGAATCTCTGAGG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGTGGGGATCTGCAGTaGGAGGCTGATGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWGGDLQ*EADDAH
Trigger: GTGGGCATCATCAGCCTCCCACTGCAGATCCCCACC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCCTCCTCGCCTTCCCTaGCCTTCTCTACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRPPRLP*PSLLSI
Trigger: AATGGACAGTAGAGAAGGCCAGGGAAGGCGAGGAGG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTGGGCGATGAACTCCTaGGAGATGTCCATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGWAMNS*EMSIQR
Trigger: TCGCTGGATGGACATCTCCCAGGAGTTCATCGCCCA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCTCGAGGAGACTTGGTaGTGTAGACAGAGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGLEETW*CRQSRR
Trigger: ACGCCTGCTCTGTCTACACCACCAAGTCTCCTCGAG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCTCCTCCACGCTGTTaGGAAGCCCCAGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSPPRC*EAPGWP
Trigger: GGGCCATCCTGGGGCTTCCCAACAGCGTGGAGGAGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCCACACCGCCTTCTTaGACTTGTAAGGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGATPPS*TCKDAP
Trigger: CGGAGCATCCTTACAAGTCCAAGAAGGCGGTGTGGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTGCGCCAGACTCTGCTaGTTTCCGGTGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVCARLC*FPVQGP
Trigger: GGGACCCTGCACCGGAAACCAGCAGAGTCTGGCGCA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGAGGTGGTGTCTTCTTaGGGGGCTCTGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWEVVSS*GALEVA
Trigger: AGCCACCTCCAGAGCCCCCCAAGAAGACACCACCTC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGGCTTCCACTCCAGCTaGTTCTCAGCGGCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRGFHSS*FSAALA
Trigger: GGCTAGAGCCGCTGAGAATCAGCTGGAGTGGAAGCC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCGGTGGTGTAGACGTTaGGGCGGTCAATGCAATTCA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGRWCRR*GGQCNS
Trigger: TGAATTGCATTGACCGCCTCAACGTCTACACCACCG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGACGATCCAGCTTGCTaGCCAGCCAATCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRDDPAC*PANPSL
Trigger: CAAACTTGGATTGGCTGGTCAGCAAGCTGGATCGTC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTGTGGTTCTCCTGGATaGTGTTCAGCACCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGCGSPG*CSAPQD
Trigger: GTCCTGAGGTGCTGAACATCATCCAGGAGAACCACA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGACATCCAGGACCTTGTaGTTCCGCCCATGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRTSRTL*FRPCLS
Trigger: AGACAAGCATGGGCGGAATCACAAGGTCCTGGATGT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGGCTGTAGCCCTCGCTaGGGGCCCAGCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARGCSPR*GPSPPS
Trigger: TGAGGGTGGGCTGGGCCCTCAGCGAGGGCTACAGCC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGATGGTAGTCAGGAGTaGCCCAGCCCACCCACACGC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWDGSQE*PSPPTR
Trigger: GCGTGTGGGTGGGCTGGGTCACTCCTGACTACCATC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCTTTCCCATTGGCTGTaGAGGTCATTAAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLSHWL*RSLSRW
Trigger: CCACCGGCTTAATGACCTTCACAGCCAATGGGAAAG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGTCTCAGGGAGGTTGTaGCCCCAACGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEVSGRL*PQRQAG
Trigger: GCCTGCCTGGCGTTGGGGTCACAACCTCCCTGAGAC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGACACCCTGCCAGGTATaGCACAACCTTTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGTPCQV*HNLFQV
Trigger: GACCTGGAAAAGGTTGTGTCATACCTGGCAGGGTGT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCGCGCTGTGCTTTGGTaGGCGAGCGGCCCCGCGACA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARRAVLW*ASGPAT
Trigger: TGTCGCGGGGCCGCTCGCTCACCAAAGCACAGCGCG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCCTTCTCCTTGGCCGTaGGCGTGTCGTAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVPSPWP*ACRREP
Trigger: TGGTTCCCTACGACACGCTCACGGCCAAGGAGAAGG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTTTCTCCCACCATCCTaGACAGCTCCTCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGFLPPS*TAPLHW
Trigger: CCAATGCAGAGGAGCTGTTCAGGATGGTGGGAGAAA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTTTCTCCCACCATCCTaGACAGCTCCTCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRFLPPS*TAPLHW
Trigger: CCAATGCAGAGGAGCTGTTCAGGATGGTGGGAGAAA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTTAGAGCTGTGCGGCTaGAGTGTAGGACCAACTGGT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLELCG*SVGPTG
Trigger: ACCAGTTGGTCCTACACTTCAGCCGCACAGCTCTAA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGACCAGTAGAAGTCACTaGTGGATTCCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGTSRSH*WIPAAA
Trigger: TGCGGCTGCAGGAATCCATCAGTGACTTCTACTGGT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTGGTGCGGAGCGTCTTaGCTCCCATGGCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHWCGAS*LPWRCP
Trigger: TGGACATCGCCATGGGAGTCAAGACGCTCCGCACCA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACATACGACTGTGTGCGTaGCGGAGCAGGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHIRLCA*RSRMAW
Trigger: CCACGCCATCCTGCTCCGGCACGCACACAGTCGTAT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCTGCGCAGCTTGGTCTaGTTCTCCTCGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRLRSLV*FSSCCS
Trigger: GCTGCAGCACGAGGAGAAGCAGACCAAGCTGCGCAG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAGAGGCTCTGTCGGTTaGGCAGGCTGCGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRGSVG*AGCAAW
Trigger: CCAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGATTCAAAGACACCCTaGACGGGGCAGCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGDSKTP*TGQPLI
Trigger: TATCAACGGCTGCCCCGTGCAGGGTGTCTTTGAATC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCCTTCTCATCTGCCATaGCCACGTGGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRPSHLP*PRGSPG
Trigger: CCCTGGGCTGCCACGTGGGCATGGCAGATGAGAAGG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCTCGCCCAGACATTGTaGCCGTTCTCTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLAQTL*PFSASR
Trigger: CCGGCTGGCAGAGAACGGGCACAATGTCTGGGCGAG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGTAGCTCCAGCCTTGTaGCACGCGGTCTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGVAPAL*HAVSRP
Trigger: TGGGCGAGAGACCGCGTGGCACAAGGCTGGAGCTAC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTGCATAGGACTTCTCTaGCCGGAAGATGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVCIGLL*PEDAGP
Trigger: CGGGCCCGCATCTTCCGGGCAGAGAAGTCCTATGCA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTGCATAGGACTTCTCTaGCCGGAAGATGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHCIGLL*PEDAGP
Trigger: CGGGCCCGCATCTTCCGGGCAGAGAAGTCCTATGCA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTCTCAGCTCAGGCCTTaGCCAGCCCACTCGCATCTC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHSQLRP*PAHSHL
Trigger: GAGATGCGAGTGGGCTGGGCAAGGCCTGAGCTGAGA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCACAGTGCCATCCATaGGGGCCACCTCATAGTGCG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPQCHP*GPPHSA
Trigger: CGCACTATGAGGTGGCCCGCATGGATGGCACTGTGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCTGGTCCACGTGGCTaGACAGGGCATGAGCCACGC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPGPRG*TGHEPR
Trigger: GCGTGGCTCATGCCCTGTGCAGCCACGTGGACCAGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCGCATGCAACAGCTGTaGCTGGTCCACGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRRMQQL*LVHVAA
Trigger: TGCAGCCACGTGGACCAGGCACAGCTGTTGCATGCG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCGGGCAGCTTCATCTaGAGCAGCCCCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSGSFI*SSPSSS
Trigger: GCTTGAGGAGGGGCTGCTGCAGATGAAGCTGCCCGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGGCGGCTTCCCAGAGTaGTCTCCTCCTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRGGFPE*SPPLAP
Trigger: AGGAGCCAGAGGAGGAGAGCACTCTGGGAAGCCGCC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTCCTGGGGACCCATCTaGACAATGAGCAGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWSWGPI*TMSSER
Trigger: CCGCTCACTGCTCATTGTGCAGATGGGTCCCCAGGA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGTGTGGAGCCCTGCATaGCCAGGCCAATGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGVWSPA*PGQCRC
Trigger: ACAGCGGCATTGGCCTGGGCATGCAGGGCTCCACAC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCCAGGGTGGGGATCTaGAGTGGGAGGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPRVGI*SGRLMM
Trigger: CATCATCAGCCTCCCACTGCAGATCCCCACCCTGGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAGGTAGCGGTTCAGTaGCAGCGCCATCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVEVAVQ*QRHLRG
Trigger: ACCACGGAGATGGCGCTGGCACTGAACCGCTACCTC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCGTCGAAGCAGGTGCTaGAGCATGGACGGGCGGATA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRRSRC*SMDGRI
Trigger: TATCCGCCCGTCCATGCTGCAGCACCTGCTTCGACG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCCGGGGATCAAAGTTaGCTTCAGCGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWAGDQS*LQRPLW
Trigger: CCACAGTGGACGCTGAAGGCAACTTTGATCCCCGGC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTTCTCTCGATCCCGTaGCTTCTCCTTGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWLLSIP*LLLGRE
Trigger: CTCACGGCCAAGGAGAAGGCACGGGATCGAGAGAAG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACAGGCATGGCCACCACTaGCCAGCACTTTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHRHGHH*PALWLV
Trigger: CACCAGCCAAAGTGCTGGGCAGTGGTGGCCATGCCT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACGCCCTTCACCTGCGTaGGCGCCTGCGACACCTTTC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGERPSPA*APATPF
Trigger: GAAAGGTGTCGCAGGCGCGCACGCAGGTGAAGGGCG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCATCTCTGTGTAGCGTaGTCCGGACTCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRHLCVA*SGLGQP
Trigger: GGGCTGGCCGAGTCCGGAGCACGCTACACAGAGATG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTGTACAGGGGCGTCATaGGGAAACAGGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWCTGAS*GNRPPQ
Trigger: CTGTGGTGGCCTGTTTCCGCATGACGCCCCTGTACA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCCTCGCAGAGCAGCTaGAGGAAGCGGAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPSQSS*RKRNRS
Trigger: GGACCTGTTCCGCTTCCTGCAGCTGCTCTGCGAGGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCCTCGCAGAGCAGCTaGAGGAAGCGGAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPSQSS*RKRNRS
Trigger: GGACCTGTTCCGCTTCCTGCAGCTGCTCTGCGAGGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACTCCTCAGCCTCCTCTaGGCCCTCGTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRLLSLL*ALVLVL
Trigger: GAGGACGAGGACGAGGGCGCAGAGGAGGCTGAGGAG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAAGGAGGCGTCAACCTaGAGCTCCCCACTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWKEAST*SSPLAV
Trigger: AACCGCAAGTGGGGAGCTCCAGGTTGACGCCTCCTT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCAGGGCCTTAGGGTCTaGGGCAGCATAGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVQGLRV*GSIGEP
Trigger: TGGCTCACCTATGCTGCCCCAGACCCTAAGGCCCTG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCACCCTCAGGTGGGTaGCCTGAGCTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPPSGG*PELSEM
Trigger: CATTTCTGACAGCTCAGGCCACCCACCTGAGGGTGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTACTCTTTGATGGGTTaGAGATGGAGCCGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGYSLMG*RWSRSR
Trigger: TCGGGAGCGGCTCCATCTCCAACCCATCAAAGAGTA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATCTGCCATGCCCACGTaGCAGCCCAGGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRSAMPT*QPRASR
Trigger: TCTGCTGGCCCTGGGCTGCCACGTGGGCATGGCAGA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCTGCCATGCCCACGTaGCAGCCCAGGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESAMPT*QPRASR
Trigger: TCTGCTGGCCCTGGGCTGCCACGTGGGCATGGCAGA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCCTATTGCTGCGCTTaGTGGCCTCGTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPYCCA*WPRPAG
Trigger: GCCTGCTGGACGAGGCCACCAAGCGCAGCAATAGGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCAGGGGCGCCCAAATaGCTCACTGCCCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPGAPK*LTAQVP
Trigger: TGGCACTTGGGCAGTGAGCCATTTGGGCGCCCCTGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCAGCGGAAGTGCTGGTaGAACTGGACCGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWQRKCW*NWTGRL
Trigger: AAGCCTTCCGGTCCAGTTCCACCAGCACTTCCGCTG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGAAGAGCCGGAGTaGAAGGTGGTTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWGEEPE*KVVGSS
Trigger: TGATGACCCAACCACCTTCCACTCCGGCTCTTCCCC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACCACCCACACGCAGCTaGGCTCCTGACCCGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEPPTRS*APDPRR
Trigger: TCTTCGCGGGTCAGGAGCCCAGCTGCGTGTGGGTGG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGATGACAAGGTCTGTGTaGCTGATTCGGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGMTRSV*LIRPCC
Trigger: ACAGCAGGGCCGAATCAGCCACACAGACCTTGTCAT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCACGTTCTGGTGGGTaGGCAGCACGAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPRSGG*AARRQQ
Trigger: CTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTGCAACAGCTGTGCCTaGTCCACGTGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVCNSCA*STWLHR
Trigger: CCTGTGCAGCCACGTGGACCAGGCACAGCTGTTGCA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTGTACTCAGAGAGCATaGAGCGACGGCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHCTQRA*SDGCGR
Trigger: CCTGCCGCAGCCGTCGCTCCATGCTCTCTGAGTACA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACGCACTTCGCCCAGGTaGGAAAAGCGTGATGGCGCG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGRTSPR*EKRDGA
Trigger: CGCGCCATCACGCTTTTCCCACCTGGGCGAAGTGCG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCGCACTTCGCCCAGGTaGGAAAAGCGTGATGGCGCG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRTSPR*EKRDGA
Trigger: CGCGCCATCACGCTTTTCCCACCTGGGCGAAGTGCG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCAGCGCACCACTGTGTaGGACACCAGCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHQRTTV*DTSSCK
Trigger: CTTGCAGGAGCTGGTGTCCCACACAGTGGTGCGCTG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGGATGGCCTCTTCGATaGCAGCCAGCAGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRGWPLR*QPAALS
Trigger: GCTCAGGGCTGCTGGCTGCCATCGAAGAGGCCATCC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTGGGGATCTGCAGTaGGAGGCTGATGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGGDLQ*EADDAH
Trigger: GTGGGCATCATCAGCCTCCCACTGCAGATCCCCACC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGGTGCCCGCAAAGAGTaGCGCGCACTTGGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRGARKE*RALGDE
Trigger: CTCATCACCAAGTGCGCGCCACTCTTTGCGGGCACC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAACTTCAGCAACTCCTaGGCCTTCTCTCGATCCCGT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRNFSNS*AFSRSR
Trigger: ACGGGATCGAGAGAAGGCCCAGGAGTTGCTGAAGTT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCACTGCCCAGCACTTTaGCTGGTGTGGATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGHCPAL*LVWIGS
Trigger: ACTTCCTATCCACACCAGCCAAAGTGCTGGGCAGTG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCCACATAGGGGTTCCTaGTGGTTCCCAGAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRPHRGS*WFPESR
Trigger: TCTACTCTCTGGGAACCACCAGGAACCCCTATGTGG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACTCCAGGAATGCCACTaGCATGGCTGCGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRLQECH*HGCGQA
Trigger: CGCCTGGCCGCAGCCATGCCAGTGGCATTCCTGGAG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTGGCACGGCTCACAATaGGCTGGGCAAACACGGCCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVWHGSQ*AGQTRP
Trigger: TGGCCGTGTTTGCCCAGCCCATTGTGAGCCGTGCCA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGTAGGAGCTCCGGCCTaGCACGGCTCACAATGGGCT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGVGAPA*HGSQWA
Trigger: AGCCCATTGTGAGCCGTGCCAGGCCGGAGCTCCTAC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCGCCCTCCTCCAGGTaGCAGCTCTTTGCCATGATG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPPSSR*QLFAMM
Trigger: CATCATGGCAAAGAGCTGCCACCTGGAGGAGGGCGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAGCGCCTGGATACTCTaGAAGAAGCCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSAWIL*KKPTSF
Trigger: GAAGGAAGTGGGCTTCTTCCAGAGTATCCAGGCGCT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGTTTGCATCAGCGCCTaGATACTCTGGAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRVCISA*ILWKKP
Trigger: GGGCTTCTTCCAGAGTATCCAGGCGCTGATGCAAAC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCAGGAACTGGATCTCTaGGCCAGTGAACTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRQELDL*ASELLL
Trigger: CAGAAGCAGTTCACTGGCCCAGAGATCCAGTTCCTG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGCATCTCCCACTaGGCACGGTTGGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRWGISH*ARLVSE
Trigger: CTCAGAGACCAACCGTGCCCAGTGGGAGATGCCCCA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCACCTCGTCGCCGGTaGGGTCCGGCATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARAPRRR*GPACLP
Trigger: TGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTTCAGCAGCTCTATCTaGCTGGAGTCCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGFSSSI*LESSEG
Trigger: TCCCTCAGAGGACTCCAGCCAGATAGAGCTGCTGAA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACACTTCAGCTGTTCCTTaGGCACCGTGGCGCTGCACT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHTSAVP*APWRCT
Trigger: AGTGCAGCGCCACGGTGCTCAAGGAACAGCTGAAGT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCCCCCGCCCTGGGATaGCTCCACACCGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSPALG*LHTGLH
Trigger: GTGGAGGCCGGTGTGGAGTCATCCCAGGGCGGGGGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCTGGGGCAGCATAGGTaGGCCACAGGCCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQLGQHR*ATGLRP
Trigger: TGGCCTCAGGCCTGTGGCTCACCTATGCTGCCCCAG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCTGTAGGCTCAGGATaGCGCCCTCGATGGGCAATG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPVGSG*RPRWAM
Trigger: CATTGCCCATCGAGGGCGTCATCCTGAGCCTACAGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCTCAGGTGGGTGGCCTaGGCTGTCAGAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLRWVA*AVRNGA
Trigger: GGCTCCATTTCTGACAGCTCAGGCCACCCACCTGAG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGGCTGTAGCCCTCGCTaGGGGCCCAGCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRGCSPR*GPSPPS
Trigger: TGAGGGTGGGCTGGGCCCTCAGCGAGGGCTACAGCC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGAGCCCATCGAGGTTaGAGGATTCAAAGACACCCT +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGRAHRG*RIQRHP
Trigger: AGGGTGTCTTTGAATCCTTCAACCTCGATGGGCTCT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGGCACAGGCTCAAACTaGGGAAGACTCTTGCTAAAC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGGTGSN*GRLLLN
Trigger: GTTTAGCAAGAGTCTTCCTCAGTTTGAGCCTGTGCC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGACGCAGCTGGGCTCCTaGCCCGCGAAGACCCTCACA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQTQLGS*PAKTLT
Trigger: TGTGAGGGTCTTCGCGGGTCAGGAGCCCAGCTGCGT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACAAGGTCTGTGTGGCTaGTTCGGCCCTGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEQGLCG*FGPAVR
Trigger: CCGGACAGCAGGGCCGAATCAGCCACACAGACCTTG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGACCCATCTGCACAATaGGCAGTGAGCGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHDPSAQ*AVSGSG
Trigger: GCCAGATCCGCTCACTGCTCATTGTGCAGATGGGTC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGACCCATCTGCACAATaGGCAGTGAGCGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVDPSAQ*AVSGSG
Trigger: GCCAGATCCGCTCACTGCTCATTGTGCAGATGGGTC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCTGTGCTTTGGTaGGCGAGCGGCCCCGCGACA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGARAVLW*ASGPAT
Trigger: TGTCGCGGGGCCGCTCGCTCACCAAAGCACAGCGCG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTCTTGGCGAACTCATTaGGGATGGGCACATCGAACA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGSWRTH*GWAHRT
Trigger: TGTTCGATGTGCCCATCCTCAATGAGTTCGCCAAGA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCTTCTCCTTGGCCGTaGGCGTGTCGTAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPSPWP*ACRREP
Trigger: TGGTTCCCTACGACACGCTCACGGCCAAGGAGAAGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCTCCAGGTGGGCGATaGACTCCTGGGAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPPGGR*TPGRCP
Trigger: TGGACATCTCCCAGGAGTTCATCGCCCACCTGGAGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCCTCTCGAAGGCATTaGGGTCCAGGACGCTGCACG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRASRRH*GPGRCT
Trigger: CGTGCAGCGTCCTGGACCTCAATGCCTTCGAGAGGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCAGCACCGCCACGTTaGAGCCAATGTCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRAAPPR*SQCPVL
Trigger: CAGCACGGGACATTGGCTTCAACGTGGCGGTGCTGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGGCACGGTTGGTCTCTaGGATCTCAAAATAGATCCG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGGTVGL*DLKIDP
Trigger: CGGATCTATTTTGAGATCTCAGAGACCAACCGTGCC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCCTGGGACTCCTCCTaGTGGCATCGCGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEAWDSS*WHRVSD
Trigger: GTCACTGACGCGATGCCAGCAGGAGGAGTCCCAGGC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGAGGCTCTGTCGGTTaGGCAGGCTGCGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRGSVG*AGCAAW
Trigger: CCAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGACAACACCTCCAGGATaGCAGATGAGGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWTTPPG*QMRPPD
Trigger: GTCTGGAGGCCTCATCTGGCATCCTGGAGGTGTTGT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGTACAGCCACACCATTaGACACACAGAGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGVQPHH*THRVST
Trigger: TGTGCTCACTCTGTGTGTGCAATGGTGTGGCTGTAC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACCTTCTCATCTGCCATaGCCACGTGGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEPSHLP*PRGSPG
Trigger: CCCTGGGCTGCCACGTGGGCATGGCAGATGAGAAGG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCGGCCGCTCTGGACTaGATAGGACTTCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRAAALD*IGLLCP
Trigger: CGGGCAGAGAAGTCCTATGCAGTCCAGAGCGGCCGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGACCAGGTCCCAAGCTaGAGACTGGCAGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRDQVPS*RLAGSR
Trigger: ACGGCTTCCTGCCAGTCTGCAGCTTGGGACCTGGTC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCACAGTGCCATCCATaGGGGCCACCTCATAGTGCG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPQCHP*GPPHSA
Trigger: CGCACTATGAGGTGGCCCGCATGGATGGCACTGTGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCGGTGCAGCGGAAGTaGTGGTGGAACTGGACCGGA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRAVQRK*WWNWTG
Trigger: TCCGGTCCAGTTCCACCAGCACTTCCGCTGCACCGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGTGTGGCCCCTGCGGTaGAGCGGAAGTGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQVWPLR*SGSAGG
Trigger: TCCACCAGCACTTCCGCTGCACCGCAGGGGCCACAC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGAAGGACTCCACCCGGTaGTGCAGCTCTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVKDSTR*CSSWSQ
Trigger: CTGTGACCAAGAGCTGCAGCACCGGGTGGAGTCCTT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAATAGCATGTTGATCTaGTCCTGGGGTGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRNSMLI*SWGGER
Trigger: CCGTTCTCCACCCCAGGAGCAGATCAACATGCTATT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGATGGAGCGCTGGTTCTaGCGGCTGATTCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRMERWF*RLIRQK
Trigger: CTTCTGCCGAATCAGCCGGCAGAACCAGCGCTCCAT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGACCATGATGGCGCGGTaGTCGGTGCCCGCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRTMMAR*SVPAKS
Trigger: ACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCTTCTCTCGATCCCGTaGCTTCTCCTTGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHLLSIP*LLLGRE
Trigger: CTCACGGCCAAGGAGAAGGCACGGGATCGAGAGAAG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATGGTGCTGGGCGATGTaGTGGAAGAGGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGWCWAM*WKRVVR
Trigger: CCTCACCACCCTCTTCCAGCACATCGCCCAGCACCA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTGGTGCTGGGCGATGTaGTGGAAGAGGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWWCWAM*WKRVVR
Trigger: CCTCACCACCCTCTTCCAGCACATCGCCCAGCACCA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCCAGAGAGTAGATACTaGAGAGCGTTCGGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRPESRY*RAFGSK
Trigger: CTTGCTACCGAACGCTCTGCAGTATCTACTCTCTGG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCCTCCTCAGCTTCTaGCTTGGCTTCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWTLLSF*LGFQAQ
Trigger: CTGCGCCTGGAAGCCAAGGCAGAAGCTGAGGAGGGT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTCCTCCTCTTCTTCCTaGTCTCCAGCTTTCGATAGG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGSSSSS*SPAFDR
Trigger: CCTATCGAAAGCTGGAGAGCAGGAAGAAGAGGAGGA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCGTCCTCGTTCACCATaGCCAGCCCCTCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWRPRSP*PAPLPC
Trigger: ACAAGGCAGAGGGGCTGGGCATGGTGAACGAGGACG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATGTGCGCGAACACGTaGAGGAAGCCCACCACGGCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWMCANT*RKPTTA
Trigger: TGCCGTGGTGGGCTTCCTGCACGTGTTCGCGCACAT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGTCGTGGGGCACATaGTCTGACAGGTTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGSWGT*SDRLVS
Trigger: GCTTACCAACCTGTCAGAGCATGTGCCCCACGACCC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCTCCATGTAGCCGGTaGTCTCCTCCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWAPCSR*SPPGSS
Trigger: ACTACTTCCTGGAGGAGAGCACCGGCTACATGGAGC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGCTGGTCCTCATACTaGTTGCGGAAACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGSWSSY*LRKQSP
Trigger: TGGAGACTGTTTCCGCAAGCAGTATGAGGACCAGCT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACGTGCCGGAGCAGGATaGCGTGGCCATACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGRAGAG*RGHTRV
Trigger: CACTCTTGTATGGCCACGCCATCCTGCTCCGGCACG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGAAGGAGGCGTCAACCTaGAGCTCCCCACTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRKEAST*SSPLAV
Trigger: AACCGCAAGTGGGGAGCTCCAGGTTGACGCCTCCTT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCACAGCCAGAGCAGATaGGATTCATGTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGHSQSR*DSCSTE
Trigger: CTCTGTGGAACATGAATCCCATCTGCTCTGGCTGTG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACACCACCACAAGGCCTTaGTCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHTTTRP*SSVSPR
Trigger: CCTTGGGCTCACTGAGGACCAAGGCCTTGTGGTGGT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCAGGGCCTTAGGGTCTaGGGCAGCATAGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWQGLRV*GSIGEP
Trigger: TGGCTCACCTATGCTGCCCCAGACCCTAAGGCCCTG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCCAATCCAAGTTTGTaGAGAAGAGCGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGANPSL*RRAHSW
Trigger: CCAACTGTGCGCTCTTCTCCACAAACTTGGATTGGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCACCCTCAGGTGGGTaGCCTGAGCTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPPSGG*PELSEM
Trigger: CATTTCTGACAGCTCAGGCCACCCACCTGAGGGTGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCACAGCTTCATGGCATaGAGCATAGCCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRHSFMA*SIARWG
Trigger: CCCCCACCTGGCTATGCTCCATGCCATGAAGCTGTG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATATTGCTGCGCTTGGTaGCCTCGTCCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGYCCAW*PRPAGG
Trigger: ACCGCCTGCTGGACGAGGCCACCAAGCGCAGCAATA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGTGCAGCGGAAGTGCTaGTGGAACTGGACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGVQRKC*WNWTGR
Trigger: CCTTCCGGTCCAGTTCCACCAGCACTTCCGCTGCAC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTTCCCCAGCTCAAACTaGACCACGTTCTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWFPSSN*TTFWWV
Trigger: CACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCTGTAGGAAGTGGTTaGGCATTCGGCTCCACGAGA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPVGSG*AFGSTR
Trigger: TCTCGTGGAGCCGAATGCCCAACCACTTCCTACAGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACGCACTTCGCCCAGGTaGGAAAAGCGTGATGGCGCG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGERTSPR*EKRDGA
Trigger: CGCGCCATCACGCTTTTCCCACCTGGGCGAAGTGCG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCACGGGGGTGAGAAATaGTGTGGAGGTCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRHGGEK*CGGLRE
Trigger: CTCCCTGAGACCTCCACACCATTTCTCACCCCCGTG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGAGCCGGAGCTTCTGTaGCCCCAGCAGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGAREPELL*PQQLAG
Trigger: CCCTGCCAGCTGCTGGGGCCACAGAAGCTCCGGCTC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGCTTGTCACCATCTTaGGGAAGCGGATCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGSLSPS*GSGSPL
Trigger: CAAAGGAGATCCGCTTCCCCAAGATGGTGACAAGCT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGGATGGCCTCTTCGATaGCAGCCAGCAGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRGWPLR*QPAALS
Trigger: GCTCAGGGCTGCTGGCTGCCATCGAAGAGGCCATCC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGCAGGTGCTGCAGCATaGACGGGCGGATATACCTGC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRAGAAA*TGGYTC
Trigger: GCAGGTATATCCGCCCGTCCATGCTGCAGCACCTGC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCTCCTCGCCTTCCCTaGCCTTCTCTACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPPRLP*PSLLSI
Trigger: AATGGACAGTAGAGAAGGCCAGGGAAGGCGAGGAGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCACAGCCTCCAGGTaGGCGATGAACTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWTTASR*AMNSWE
Trigger: CTCCCAGGAGTTCATCGCCCACCTGGAGGCTGTGGT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAACCACAGCCTCCAGGTaGGCGATGAACTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGTTASR*AMNSWE
Trigger: CTCCCAGGAGTTCATCGCCCACCTGGAGGCTGTGGT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCATAGGGGTTCCTGGTaGTTCCCAGAGAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRHRGSW*FPESRY
Trigger: GTATCTACTCTCTGGGAACCACCAGGAACCCCTATG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCTCCTCCACGCTGTTaGGAAGCCCCAGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESPPRC*EAPGWP
Trigger: GGGCCATCCTGGGGCTTCCCAACAGCGTGGAGGAGA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTGGCACGGCTCACAATaGGCTGGGCAAACACGGCCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWWHGSQ*AGQTRP
Trigger: TGGCCGTGTTTGCCCAGCCCATTGTGAGCCGTGCCA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGTAGGAGCTCCGGCCTaGCACGGCTCACAATGGGCT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEVGAPA*HGSQWA
Trigger: AGCCCATTGTGAGCCGTGCCAGGCCGGAGCTCCTAC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCAGTGAACTGCTTCTaGCTGTCCATGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPVNCF*LSMAFW
Trigger: CCAGAAGGCCATGGACAGCCAGAAGCAGTTCACTGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCCAATGTCCCGTGCTaGTTCCTGGAAGCGGTTCGC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGANVPC*FLEAVR
Trigger: GCGAACCGCTTCCAGGAACCAGCACGGGACATTGGC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTGGGGCATCTCCCACTaGGCACGGTTGGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRWGISH*ARLVSE
Trigger: CTCAGAGACCAACCGTGCCCAGTGGGAGATGCCCCA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCTCCCGTGCCAGCCTaGTCCGCTGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPPVPA*SAAASS
Trigger: TGAAGAGGCTGCAGCGGACCAGGCTGGCACGGGAGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGAGGTGGTGTCTTCTTaGGGGGCTCTGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRREVVSS*GALEVA
Trigger: AGCCACCTCCAGAGCCCCCCAAGAAGACACCACCTC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTGTGTCCCCCGCCCTaGGATGACCACTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWLCPPP*DDHLSK
Trigger: TTTGGATAAGTGGTCATCCCAGGGCGGGGGACACAG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCTGCAGGGCTCGAACTaGCAGAGACTGCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLQGSN*QRLLQD
Trigger: ATCCTGGAGCAGTCTCTGTCAGTTCGAGCCCTGCAG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTCAGACCTCTGCTTTaGGGCTGGGTGCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHFRPLL*GWVHRP
Trigger: TGGACGATGCACCCAGCCTCAAAGCAGAGGTCTGAA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACTCAGGTGGGTGGCCTaGGCTGTCAGAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGELRWVA*AVRNGA
Trigger: GGCTCCATTTCTGACAGCTCAGGCCACCCACCTGAG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCACGGGGCAGCCGTTaGTACGAAAGGAGATGGACG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEARGSR*YERRWT
Trigger: CGTCCATCTCCTTTCGTATCAACGGCTGCCCCGTGC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCAGGAACATGGCGGCTaGCAGCGGCATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHQEHGG*QRHDVL
Trigger: AAGAACATCATGCCGCTGTCAGCCGCCATGTTCCTG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCAGCCAGCAGCCCTaGGCCACCCTCACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGGSQQP*ATLTPQ
Trigger: CTGAGGGGTGAGGGTGGCTCAGGGCTGCTGGCTGCC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCTCTTTGTCCTTCTCTaGGAAGGTCTTGTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLFVLL*EGLVGS
Trigger: AGACCCTACAAGACCTTCTCAGAGAAGGACAAAGAG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTACGTCATCCAGGATaGCATCGTCTCCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWVRHPG*HRLRTG
Trigger: ACCAGTTCGGAGACGATGTCATCCTGGATGACGTAC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGTGGGGCACATGCTCTaGCAGGTTGGTAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWVGHML*QVGKQH
Trigger: GTGCTGCTTACCAACCTGTCAGAGCATGTGCCCCAC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGTGGGGCACATGCTCTaGCAGGTTGGTAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRVGHML*QVGKQH
Trigger: GTGCTGCTTACCAACCTGTCAGAGCATGTGCCCCAC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGACGCGATGCGCCCATaGTTTCGATGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQDAMRP*FRCGPG
Trigger: ACCTGGGCCGCATCGAAATCATGGGCGCATCGCGTC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCAGGCTCGGAGATCTaGGCTGCGATCTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSGSEI*AAICIS
Trigger: TGAGATGCAGATCGCAGCTCAGATCTCCGAGCCTGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGAAAGCAAAGGCGGTTaGCGAACCCCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRESKGG*RTPQRP
Trigger: TGGCCGCTGAGGGGTTCGGCAACCGCCTTTGCTTTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGGCCAGCATCTCCTaGAGGGCTCGAACTGACAGA +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHLASIS*RARTDR
Trigger: TCTGTCAGTTCGAGCCCTGCAGGAGATGCTGGCCAA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGTACATACGACTGTGTaGGTGCCGGAGCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRVHTTV*VPEQDG
Trigger: GCCATCCTGCTCCGGCACGCACACAGTCGTATGTAC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTCTCCTTCAGACCTCTaGTTTGAGGCTGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWSPSDL*FEAGCI
Trigger: GATGCACCCAGCCTCAAAGCAGAGGTCTGAAGGAGA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGTCGGTTGCGCAGGCTaGGCAGCTTGGTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEVGCAG*AAWSAS
Trigger: AGAAGCAGACCAAGCTGCGCAGCCTGCGCAACCGAC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACACAACACCTCCAGGATaGCAGATGAGGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHTTPPG*QMRPPD
Trigger: GTCTGGAGGCCTCATCTGGCATCCTGGAGGTGTTGT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCTGCGTGGAGCCCTCTaGTCGGCCCACAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLRGAL*SAHKDV
Trigger: AACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTTCATGAATGTTCTCTaGCAGCTTCTCCCGAATCCG +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRFMNVL*QLLPNP
Trigger: CGGATTCGGGAGAAGCTGGCAGAGAACATTCATGAA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATTCTGCCTTCTCATCTaGCATGCCCACGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGFCLLI*HAHVAA
Trigger: GGCTGCCACGTGGGCATGGCAGATGAGAAGGCAGAA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTTCTGCCTTCTCATCTaGCATGCCCACGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRFCLLI*HAHVAA
Trigger: GGCTGCCACGTGGGCATGGCAGATGAGAAGGCAGAA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGATTGTGCCCGTTCTCTaGCAGCCGGTCCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRIVPVL*QPVHQS
Trigger: ACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAAT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCTCGCCCAGACATTGTaGCCGTTCTCTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQLAQTL*PFSASR
Trigger: CCGGCTGGCAGAGAACGGGCACAATGTCTGGGCGAG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAGAGGCTGTCCCTATTaGTGCGCTTGGTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRGCPY*CAWWPR
Trigger: ACGAGGCCACCAAGCGCAGCAATAGGGACAGCCTCT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGCGGCCGCTCTGGACTaGATAGGACTTCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQAAALD*IGLLCP
Trigger: CGGGCAGAGAAGTCCTATGCAGTCCAGAGCGGCCGC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCTCTCCTGTGGTGACTaGTTCAAACTCGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLSCGD*FKLEVP
Trigger: TGGTACTTCGAGTTTGAAGCAGTCACCACAGGAGAG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCTCAGCTCAGGCCTTaGCCAGCCCACTCGCATCTC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESQLRP*PAHSHL
Trigger: GAGATGCGAGTGGGCTGGGCAAGGCCTGAGCTGAGA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTGGTAACTGGGCGTTaGATGTTGATGGCGAACGGC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVVVTGR*MLMANG
Trigger: GCCGTTCGCCATCAACATGCAACGCCCAGTTACCAC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCAGGGGTGTGGCCCCTaGGGTGCAGCGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAQGCGP*GAAEVL
Trigger: CAGCACTTCCGCTGCACCGCAGGGGCCACACCCCTG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTGATTCGGCCCTaGTGTCCGGGACTCACAAAA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRWLIRP*CPGLTK
Trigger: TTTTGTGAGTCCCGGACAGCAGGGCCGAATCAGCCA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTGGCTGATTCGGCCCTaGTGTCCGGGACTCACAAAA +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHWLIRP*CPGLTK
Trigger: TTTTGTGAGTCCCGGACAGCAGGGCCGAATCAGCCA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGACAGGCATCAGCATCTaGACCTCCAGCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRTGISI*TSSLGG
Trigger: CCCACCAAGGCTGGAGGTGCAGATGCTGATGCCTGT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGAGGTCGTAGTAGCCTaGTCGCAGAGGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRREVVVA*SQRTWQ
Trigger: TTGCCAGGTCCTCTGCGAGCAGGCTACTACGACCTC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGAGGTCGTAGTAGCCTaGTCGCAGAGGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWEVVVA*SQRTWQ
Trigger: TTGCCAGGTCCTCTGCGAGCAGGCTACTACGACCTC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATCGGGCAGCTTCATCTaGAGCAGCCCCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRSGSFI*SSPSSS
Trigger: GCTTGAGGAGGGGCTGCTGCAGATGAAGCTGCCCGA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACTTGTGCTCCTCAGGTaGCGGCTCCTCCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGELVLLR*RLLLRL
Trigger: AAGCCTGAGGAGGAGCCGGCACCTGAGGAGCACAAG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCGTCATACTGCCGATaGAGGAGGCTGAACATGGCA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPSYCR*RRLNMA
Trigger: TGCCATGTTCAGCCTCCTGCATCGGCAGTATGACGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTCAGGCACGAAGGATaGAGACATCTTCGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWVRHEG*RHLRLN
Trigger: GTTCAGCCGAAGATGTCTGCATCCTTCGTGCCTGAC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCCACATCCAGCACATaGAGCAAGAAGTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPTSST*SKKSWF
Trigger: GAACCAGGACTTCTTGCTGCATGTGCTGGATGTGGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGCCGGGGATCAAAGTTaGCTTCAGCGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWAGDQS*LQRPLW
Trigger: CCACAGTGGACGCTGAAGGCAACTTTGATCCCCGGC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGTTGTGGTAATTTTCTaGCAGTTGTTCGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGVVVIF*QLFGHG
Trigger: GCCATGGCCGAACAACTGGCAGAAAATTACCACAAC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCATGGCCACCACTaGCCAGCACTTTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRHGHH*PALWLV
Trigger: CACCAGCCAAAGTGCTGGGCAGTGGTGGCCATGCCT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACCCACGCCCTTCACCTaGGTGCGCGCCTGCGACACC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGPTPFT*VRACDT
Trigger: GGTGTCGCAGGCGCGCACGCAGGTGAAGGGCGTGGG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAACCCTCCTCAGCTTCTaGCTTGGCTTCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGETLLSF*LGFQAQ
Trigger: CTGCGCCTGGAAGCCAAGGCAGAAGCTGAGGAGGGT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGACACTTCCTGAACTCTaGGCACGATTTTCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGTLPEL*ARFSRD
Trigger: ATCCCGAGAAAATCGTGCGCAGAGTTCAGGAAGTGT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGAGGACGCTGCACGTTTaGATCAGCGCCTGGATACTC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRTLHV*ISAWIL
Trigger: GAGTATCCAGGCGCTGATGCAAACGTGCAGCGTCCT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGAGGACGCTGCACGTTTaGATCAGCGCCTGGATACTC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRRTLHV*ISAWIL
Trigger: GAGTATCCAGGCGCTGATGCAAACGTGCAGCGTCCT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACTGTGCGCCAGACTCTaGTGGTTTCCGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGELCARL*WFPVQG
Trigger: ACCCTGCACCGGAAACCAGCAGAGTCTGGCGCACAG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCCCAGAGGCGACTGTaGGCCAGACTCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSQRRL*ARLCWF
Trigger: AAACCAGCAGAGTCTGGCGCACAGTCGCCTCTGGGA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACGCCCTCTGCATCGCTaGCAGCGCCGCTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGRPLHR*QRRSAA
Trigger: AGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACGGAGCAGGATGGCGTaGCCATACAAGAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGRSRMA*PYKSVL
Trigger: CAGGACACTCTTGTATGGCCACGCCATCCTGCTCCG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCGGAGCAGGATGGCGTaGCCATACAAGAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWRSRMA*PYKSVL
Trigger: CAGGACACTCTTGTATGGCCACGCCATCCTGCTCCG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTGGTGTGGGCCTTGCTaGCATCAACCACCACAAGGC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRWCGPC*HQPPQG
Trigger: GCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACCA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTGGGACTCCTCCTGCTaGCATCGCGTCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWWDSSC*HRVSDN
Trigger: GTTGTCACTGACGCGATGCCAGCAGGAGGAGTCCCA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCAGGCTGCGCAGCTTaGTCTGCTTCTCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEAGCAA*SASPRA
Trigger: AGCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAGCATCCCCTCCTCCTaGAAGAGGCTCTGTCGGTTG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRSIPSS*KRLCRL
Trigger: CAACCGACAGAGCCTCTTCCAGGAGGAGGGGATGCT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCGGTGATGAGGTCCTaGTTGGAGCGTACAGCCACA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSVMRS*LERTAT
Trigger: TGTGGCTGTACGCTCCAACCAGGACCTCATCACCGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACACAGCTTCATGGCATaGAGCATAGCCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGHSFMA*SIARWG
Trigger: CCCCCACCTGGCTATGCTCCATGCCATGAAGCTGTG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGTGAGAGGCAGCGACTaGGGCCCACCAGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGVRGSD*GPPGGA
Trigger: GGCCCCACCTGGTGGGCCCCAGTCGCTGCCTCTCAC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATATTGCTGCGCTTGGTaGCCTCGTCCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEYCCAW*PRPAGG
Trigger: ACCGCCTGCTGGACGAGGCCACCAAGCGCAGCAATA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATATTGCTGCGCTTGGTaGCCTCGTCCAGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRYCCAW*PRPAGG
Trigger: ACCGCCTGCTGGACGAGGCCACCAAGCGCAGCAATA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAACTGGACCACGTTCTaGTGGGTGGGCAGCACGAAG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRNWTTF*WVGSTK
Trigger: CTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGCACTGTGGGGCTaGGTTCTTGCGCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQWALWG*VLALAQ
Trigger: CTGAGCGAGCGCAAGAACCCAGCCCCACAGTGCCCA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCTGTAGGAAGTGGTTaGGCATTCGGCTCCACGAGA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPVGSG*AFGSTR
Trigger: TCTCGTGGAGCCGAATGCCCAACCACTTCCTACAGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATGTGGCCCCAGCAGCTaGCAGGGCGACCACAAAACA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRCGPSS*QGDHKT
Trigger: TGTTTTGTGGTCGCCCTGCCAGCTGCTGGGGCCACA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGAGCCGGAGCTTCTGTaGCCCCAGCAGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGREPELL*PQQLAG
Trigger: CCCTGCCAGCTGCTGGGGCCACAGAAGCTCCGGCTC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACACTCCAGCAGGCTCATaGTATCCTCCACCGAGGACA +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHTPAGS*YPPPRT
Trigger: TGTCCTCGGTGGAGGATACCATGAGCCTGCTGGAGT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGACTCCAGCAGGCTCATaGTATCCTCCACCGAGGACA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRTPAGS*YPPPRT
Trigger: TGTCCTCGGTGGAGGATACCATGAGCCTGCTGGAGT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTTTGGCCAGAAGCATaGGGCAGCTTTGTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWLWPEA*GSFVSH
Trigger: GTGGCTTACAAAGCTGCCCCATGCTTCTGGCCAAAG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACATCTTTGCCCAGGGTaGGGATCTGCAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEHLCPG*GSAVGG
Trigger: GCCTCCCACTGCAGATCCCCACCCTGGGCAAAGATG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGGTGCCCGCAAAGAGTaGCGCGCACTTGGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRGARKE*RALGDE
Trigger: CTCATCACCAAGTGCGCGCCACTCTTTGCGGGCACC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAACTTCAGCAACTCCTaGGCCTTCTCTCGATCCCGT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWNFSNS*AFSRSR
Trigger: ACGGGATCGAGAGAAGGCCCAGGAGTTGCTGAAGTT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCCTTGTTGGAGGCATaGCCACCACTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSLLEA*PPLPST
Trigger: AGTGCTGGGCAGTGGTGGCCATGCCTCCAACAAGGA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTCTCCGAACTGGTGCTaGGCGATGTGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRSPNWC*AMCWKR
Trigger: CCTCTTCCAGCACATCGCCCAGCACCAGTTCGGAGA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAACATCGTCTCCGAACTaGTGCTGGGCGATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGTSSPN*CWAMCW
Trigger: CCAGCACATCGCCCAGCACCAGTTCGGAGACGATGT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTCCAGGAATGCCACTaGCATGGCTGCGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLQECH*HGCGQA
Trigger: CGCCTGGCCGCAGCCATGCCAGTGGCATTCCTGGAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCTCGAGGAGACTTGGTaGTGTAGACAGAGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRLEETW*CRQSRR
Trigger: ACGCCTGCTCTGTCTACACCACCAAGTCTCCTCGAG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATGGCACGGCTCACAATaGGCTGGGCAAACACGGCCA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEWHGSQ*AGQTRP
Trigger: TGGCCGTGTTTGCCCAGCCCATTGTGAGCCGTGCCA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGATGGTAGGGATGAAGTaGGAGCGTAGGAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRMVGMK*ERRSSG
Trigger: GCCGGAGCTCCTACGCTCCCACTTCATCCCTACCAT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGTAGCGGATGAGCAGTaGGTAGAGGGCATACAGGTC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRVADEQ*VEGIQV
Trigger: GACCTGTATGCCCTCTACCCACTGCTCATCCGCTAC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCCTCTGCATTGGGGTTaGGCTCTGTCAGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRPLHWG*ALSASV
Trigger: CACACTGGCTGACAGAGCCCAACCCCAATGCAGAGG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCCGGCGCTTCTTCTTaGTGCGTTCCTGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPGASS*CVPDLS
Trigger: GCTCAGATCAGGAACGCACCAAGAAGAAGCGCCGGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCACACCGCCTTCTTaGACTTGTAAGGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVATPPS*TCKDAP
Trigger: CGGAGCATCCTTACAAGTCCAAGAAGGCGGTGTGGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATACCCAGCTTCAGGGTaGAAGACACCATGGCACCCG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGYPASG*KTPWHP
Trigger: CGGGTGCCATGGTGTCTTCCACCCTGAAGCTGGGTA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTTTGCATCAGCGCCTaGATACTCTGGAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWVCISA*ILWKKP
Trigger: GGGCTTCTTCCAGAGTATCCAGGCGCTGATGCAAAC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGCGCCAGACTCTGCTaGTTTCCGGTGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQCARLC*FPVQGP
Trigger: GGGACCCTGCACCGGAAACCAGCAGAGTCTGGCGCA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCTTCTGGCTGTCCATaGCCTTCTGGAAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWASGCP*PSGSPS
Trigger: AGAAGGACTTCCAGAAGGCCATGGACAGCCAGAAGC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTCACTGTCACCTTCTTaGCGCTGTCTACCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRSLSPS*RCLPAH
Trigger: GTGGGCTGGTAGACAGCGCCAAGAAGGTGACAGTGA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCACTGTCACCTTCTTaGCGCTGTCTACCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSLSPS*RCLPAH
Trigger: GTGGGCTGGTAGACAGCGCCAAGAAGGTGACAGTGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGAGCTTCCTCCTTCTTTaGAGGGGGTGGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRSFLLL*RGWRWC
Trigger: ACACCACCTCCACCCCCTCCAAAGAAGGAGGAAGCT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGAGCTTCCTCCTTCTTTaGAGGGGGTGGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSFLLL*RGWRWC
Trigger: ACACCACCTCCACCCCCTCCAAAGAAGGAGGAAGCT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGAGACTGCTCCAGGATaGAGCAGCAGATGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWETAPG*SSRWPD
Trigger: ATCTGGCCATCTGCTGCTTCATCCTGGAGCAGTCTC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTCATCCATATGTCCATaGAAGAGGCGCAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHSSICP*KRRRTW
Trigger: CCACGTCCTGCGCCTCTTTCATGGACATATGGATGA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGCTCGAAGTAGCCAATaGGGTCCTGTAGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWARSSQ*GPVGSG
Trigger: TCCTGAGCCTACAGGACCTCATTGGCTACTTCGAGC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCGGTGGTGTAGACGTTaGGGCGGTCAATGCAATTCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRWCRR*GGQCNS
Trigger: TGAATTGCATTGACCGCCTCAACGTCTACACCACCG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGCACGGGGCAGCCGTTaGTACGAAAGGAGATGGACG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQARGSR*YERRWT
Trigger: CGTCCATCTCCTTTCGTATCAACGGCTGCCCCGTGC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGACTGGCTGTCCACCTaGCTGGGCTCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARDWLST*LGSWSG
Trigger: TCCTGACCAGGAGCCCAGTCAGGTGGACAGCCAGTC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCAGGAACATGGCGGCTaGCAGCGGCATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRQEHGG*QRHDVL
Trigger: AAGAACATCATGCCGCTGTCAGCCGCCATGTTCCTG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGGGTCTCCGGCGTaGGTGGCACGATGTACTCAG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGARGSPA*VARCTQ
Trigger: CTGAGTACATCGTGCCACTCACGCCGGAGACCCGCG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACAGGTGGGAAAAGCGTaGTGGCGCGGGTCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGQVGKA*WRGSPA
Trigger: CGCCGGAGACCCGCGCCATCACGCTTTTCCCACCTG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTACCAGCTCCGGGCTCTaGACGAAGTCCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGATSSGL*TKSSWA
Trigger: GGCCCAGGAGGACTTCGTTCAGAGCCCGGAGCTGGT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCCGATGCAGGAGGCTaGACATGGCACGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARADAGG*TWHGPA
Trigger: AGCTGGTCCGTGCCATGTTCAGCCTCCTGCATCGGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGACCCATCTGCACAATaGGCAGTGAGCGGATCTGGC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRDPSAQ*AVSGSG
Trigger: GCCAGATCCGCTCACTGCTCATTGTGCAGATGGGTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTCTTGGCGAACTCATTaGGGATGGGCACATCGAACA +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWSWRTH*GWAHRT
Trigger: TGTTCGATGTGCCCATCCTCAATGAGTTCGCCAAGA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCTCCAGGTGGGCGATaGACTCCTGGGAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPPGGR*TPGRCP
Trigger: TGGACATCTCCCAGGAGTTCATCGCCCACCTGGAGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGATATGTGAAGACAGTTaGCCACAGCTGGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVICEDS*PQLGHP
Trigger: CGGATGCCCCAGCTGTGGTCAACTGTCTTCACATAT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGTACGTCATCCAGGATaGCATCGTCTCCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRVRHPG*HRLRTG
Trigger: ACCAGTTCGGAGACGATGTCATCCTGGATGACGTAC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCCCGATTTCTGCCATaGGCCTTTCTAGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPRFLP*AFLALG
Trigger: TCCCAGTGCTAGAAAGGCTCATGGCAGAAATCGGGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTTTCTCCCACCATCCTaGACAGCTCCTCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVFLPPS*TAPLHW
Trigger: CCAATGCAGAGGAGCTGTTCAGGATGGTGGGAGAAA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTCGGCAACATCTTCTTaGGTGTGGCCACGATCAAGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHSATSS*VWPRSR
Trigger: CCTTGATCGTGGCCACACTCAAGAAGATGTTGCCGA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGACTGCGGACACTTCCTaGACTCTGCGCACGATTTTC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVTADTS*TLRTIF
Trigger: GAAAATCGTGCGCAGAGTTCAGGAAGTGTCCGCAGT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTAGAGCTGTGCGGCTaGAGTGTAGGACCAACTGGT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHLELCG*SVGPTG
Trigger: ACCAGTTGGTCCTACACTTCAGCCGCACAGCTCTAA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAGCCTACGATGTCCTTaGGTTTCAGAAACATGTCGA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSLRCP*VSETCR
Trigger: TCGACATGTTTCTGAAACTCAAGGACATCGTAGGCT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCGAACTGACAGAGACTaGTCCAGGATGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRRTDRD*SRMKQQ
Trigger: CTGCTGCTTCATCCTGGAGCAGTCTCTGTCAGTTCG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTTGGCCAGCATCTCCTaGAGGGCTCGAACTGACAGA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLASIS*RARTDR
Trigger: TCTGTCAGTTCGAGCCCTGCAGGAGATGCTGGCCAA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGTACATACGACTGTGTaGGTGCCGGAGCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEVHTTV*VPEQDG
Trigger: GCCATCCTGCTCCGGCACGCACACAGTCGTATGTAC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCCTGGGACTCCTCCTaGTGGCATCGCGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARAWDSS*WHRVSD
Trigger: GTCACTGACGCGATGCCAGCAGGAGGAGTCCCAGGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTTGATGAGGTTTGTCTaGAGCAGAAGTTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWLMRFV*SRSSRP
Trigger: GGGCCGAGAACTTCTGCTGCAGACAAACCTCATCAA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACTGCGTGGAGCCCTCTaGTCGGCCCACAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGELRGAL*SAHKDV
Trigger: AACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATTGTGCCCGTTCTCTaGCAGCCGGTCCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRIVPVL*QPVHQS
Trigger: ACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAAT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACAGGGGTGTGGCCCCTaGGGTGCAGCGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGQGCGP*GAAEVL
Trigger: CAGCACTTCCGCTGCACCGCAGGGGCCACACCCCTG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGACTCCACCCGGTGCTaGAGCTCTTGGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWDSTRC*SSWSQK
Trigger: TTTCTGTGACCAAGAGCTGCAGCACCGGGTGGAGTC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGTCCACATAACACTCTaGAAAGGCCGCCAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHVHITL*KGRQGL
Trigger: GAGTCCTTGGCGGCCTTTGCAGAGTGTTATGTGGAC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAATGGAGCGCTGGTTCTaGCGGCTGATTCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEMERWF*RLIRQK
Trigger: CTTCTGCCGAATCAGCCGGCAGAACCAGCGCTCCAT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAAGGGTGTGGAGCCCTaGATGCCCAGGCCAATGCCG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARKGVEP*MPRPMP
Trigger: CGGCATTGGCCTGGGCATGCAGGGCTCCACACCCTT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTCAGGCACGAAGGATaGAGACATCTTCGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVVRHEG*RHLRLN
Trigger: GTTCAGCCGAAGATGTCTGCATCCTTCGTGCCTGAC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCCCACATCCAGCACATaGAGCAAGAAGTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVPTSST*SKKSWF
Trigger: GAACCAGGACTTCTTGCTGCATGTGCTGGATGTGGG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGAGGTAGCGGTTCAGTaGCAGCGCCATCTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQEVAVQ*QRHLRG
Trigger: ACCACGGAGATGGCGCTGGCACTGAACCGCTACCTC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCCAGCGAAGCAGCTaGTGCAGGAAGCCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRIQRSS*CRKPKA
Trigger: TGCCTTCGGCTTCCTGCAGCAGCTGCTTCGCTGGAT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCCTTCACCTGCGTaGGCGCCTGCGACACCTTTC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGARPSPA*APATPF
Trigger: GAAAGGTGTCGCAGGCGCGCACGCAGGTGAAGGGCG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCGTCTCCGAACTGGTaGTGGGCGATGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESSPNW*WAMCWK
Trigger: CTTCCAGCACATCGCCCAGCACCAGTTCGGAGACGA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCTGAACAGCTCCTCTaGATTGGGGTTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPEQLL*IGVGLC
Trigger: ACAGAGCCCAACCCCAATGCAGAGGAGCTGTTCAGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATGTACAGGGGCGTCATaGGGAAACAGGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRCTGAS*GNRPPQ
Trigger: CTGTGGTGGCCTGTTTCCGCATGACGCCCCTGTACA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCCTCTGCCTTGTTCTaGCTCTCGAAGGCATTGAGG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPSALF*LSKALR
Trigger: CCTCAATGCCTTCGAGAGGCAGAACAAGGCAGAGGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAAATCATTGTTGTaGCCCTCGCAGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRWKSLL*PSQSSC
Trigger: GCAGCTGCTCTGCGAGGGGCACAACAATGATTTCCA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAAGCATGTCCACCATCTaGCGCGCGATCATACCGTTC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSMSTI*RAIIPF
Trigger: GAACGGTATGATCGCGCGGCAGATGGTGGACATGCT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAGCATGTCCACCATCTaGCGCGCGATCATACCGTTC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRSMSTI*RAIIPF
Trigger: GAACGGTATGATCGCGCGGCAGATGGTGGACATGCT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGAAGCCAATGTCCCGTaGTGGTTCCTGGAAGCGGTT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRREANVP*WFLEAV
Trigger: AACCGCTTCCAGGAACCAGCACGGGACATTGGCTTC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCCAATGTCCCGTaGTGGTTCCTGGAAGCGGTT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGEANVP*WFLEAV
Trigger: AACCGCTTCCAGGAACCAGCACGGGACATTGGCTTC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGGGTCGTGGGGCACATaGTCTGACAGGTTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRGSWGT*SDRLVS
Trigger: GCTTACCAACCTGTCAGAGCATGTGCCCCACGACCC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCTCCTCAGCCTCCTCTaGGCCCTCGTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGALLSLL*ALVLVL
Trigger: GAGGACGAGGACGAGGGCGCAGAGGAGGCTGAGGAG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACGGTGGGGTCCGGCATaGCTGCCAGGAGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGRWGPA*LPGAPS
Trigger: TGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTCTGCGCGTTGCTGGTaGGTTCCAGAAAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWSARCW*VPESKG
Trigger: GCCTTTGCTTTCTGGAACCCACCAGCAACGCGCAGA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACGGAGCAGGATGGCGTaGCCATACAAGAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGERSRMA*PYKSVL
Trigger: CAGGACACTCTTGTATGGCCACGCCATCCTGCTCCG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCATCCCCTCCTCCTaGAAGAGGCTCTGTCGGTTG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESIPSS*KRLCRL
Trigger: CAACCGACAGAGCCTCTTCCAGGAGGAGGGGATGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTCGGTGATGAGGTCCTaGTTGGAGCGTACAGCCACA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWSVMRS*LERTAT
Trigger: TGTGGCTGTACGCTCCAACCAGGACCTCATCACCGA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACACAGCTTCATGGCATaGAGCATAGCCAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEHSFMA*SIARWG
Trigger: CCCCCACCTGGCTATGCTCCATGCCATGAAGCTGTG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGGCTGTCCACCTGACTaGGCTCCTGGTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARGCPPD*APGQEA
Trigger: AGCCTCCTGACCAGGAGCCCAGTCAGGTGGACAGCC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCTCAAAGCCTTCCTaGAGGCCACAGATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGSKPS*RPQMAK
Trigger: TTTTGCCATCTGTGGCCTCCAGGAAGGCTTTGAGCC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGTGCTGGTGGAACTaGACCGGAAGGCTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRKCWWN*TGRLSR
Trigger: CCGGCTAAGCCTTCCGGTCCAGTTCCACCAGCACTT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGAGTGGAAGGTGGTTaGGTCATCATGGCAACCTTC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGVEGG*VIMATF
Trigger: GAAGGTTGCCATGATGACCCAACCACCTTCCACTCC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGGAGTGGAAGGTGGTTaGGTCATCATGGCAACCTTC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRGVEGG*VIMATF
Trigger: GAAGGTTGCCATGATGACCCAACCACCTTCCACTCC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGGGGAAGAGCCGGAGTaGAAGGTGGTTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRGEEPE*KVVGSS
Trigger: TGATGACCCAACCACCTTCCACTCCGGCTCTTCCCC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCACCCACACGCAGCTaGGCTCCTGACCCGCGAAGA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPPTRS*APDPRR
Trigger: TCTTCGCGGGTCAGGAGCCCAGCTGCGTGTGGGTGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCACCCACACGCAGCTaGGCTCCTGACCCGCGAAGA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRPPTRS*APDPRR
Trigger: TCTTCGCGGGTCAGGAGCCCAGCTGCGTGTGGGTGG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCTGCACCTCCAGCCTTaGTGGGCACTGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGALHLQP*WALWGW
Trigger: CCAGCCCCACAGTGCCCACCAAGGCTGGAGGTGCAG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCTGTAGGAAGTGGTTaGGCATTCGGCTCCACGAGA +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPVGSG*AFGSTR
Trigger: TCTCGTGGAGCCGAATGCCCAACCACTTCCTACAGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCCACCTGTAGGAAGTaGTTGGGCATTCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSTCRK*LGIRLH
Trigger: GTGGAGCCGAATGCCCAACCACTTCCTACAGGTGGA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGTACTCAGAGAGCATaGAGCGACGGCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQCTQRA*SDGCGR
Trigger: CCTGCCGCAGCCGTCGCTCCATGCTCTCTGAGTACA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTCCTCTCCCTCCAACTaGATTCCACAATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRSSPSN*IPQCAS
Trigger: GCTGGCACATTGTGGAATCCAGTTGGAGGGAGAGGA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCCTCTCCCTCCAACTaGATTCCACAATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSSPSN*IPQCAS
Trigger: GCTGGCACATTGTGGAATCCAGTTGGAGGGAGAGGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCGCTCTCATCAGGTTTaGGTGTTGGTAGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRRSHQV*VLVEDF
Trigger: AAAGTCTTCTACCAACACCCAAACCTGATGAGAGCG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCTTTGGCCAGAAGCATaGGGCAGCTTTGTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVLWPEA*GSFVSH
Trigger: GTGGCTTACAAAGCTGCCCCATGCTTCTGGCCAAAG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGGTGGGGATCTGCAGTaGGAGGCTGATGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQGGDLQ*EADDAH
Trigger: GTGGGCATCATCAGCCTCCCACTGCAGATCCCCACC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAATCTCCTGTTCATGTaGGGATTTCTCCACCCGTCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWNLLFM*GFLHPS
Trigger: GGACGGGTGGAGAAATCCCCACATGAACAGGAGATT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCACTGCCCAGCACTTTaGCTGGTGTGGATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVHCPAL*LVWIGS
Trigger: ACTTCCTATCCACACCAGCCAAAGTGCTGGGCAGTG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAACATCGTCTCCGAACTaGTGCTGGGCGATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGETSSPN*CWAMCW
Trigger: CCAGCACATCGCCCAGCACCAGTTCGGAGACGATGT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGTAGCGGATGAGCAGTaGGTAGAGGGCATACAGGTC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWVADEQ*VEGIQV
Trigger: GACCTGTATGCCCTCTACCCACTGCTCATCCGCTAC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGTAGCGGATGAGCAGTaGGTAGAGGGCATACAGGTC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGVADEQ*VEGIQV
Trigger: GACCTGTATGCCCTCTACCCACTGCTCATCCGCTAC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCCGGCGCTTCTTCTTaGTGCGTTCCTGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPGASS*CVPDLS
Trigger: GCTCAGATCAGGAACGCACCAAGAAGAAGCGCCGGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCCACACCGCCTTCTTaGACTTGTAAGGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGATPPS*TCKDAP
Trigger: CGGAGCATCCTTACAAGTCCAAGAAGGCGGTGTGGC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACACGTCGAAGATGAACTaGCGCTTGGACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHTSKMN*RLDSFT
Trigger: GGTGAAGGAGTCCAAGCGCCAGTTCATCTTCGACGT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCTCCCGTGCCAGCCTaGTCCGCTGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRPPVPA*SAAASS
Trigger: TGAAGAGGCTGCAGCGGACCAGGCTGGCACGGGAGG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCTTCTTTGGAGGGGGTaGAGGTGGTGTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLLWRG*RWCLLG
Trigger: CCCAAGAAGACACCACCTCCACCCCCTCCAAAGAAG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTTTGCGCTCATTGTaGGCTGTGATCTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGLRSL*AVISRE
Trigger: CTCTCTGGAGATCACAGCCCACAATGAGCGCAAACC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGGTTTGCGCTCATTGTaGGCTGTGATCTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRGLRSL*AVISRE
Trigger: CTCTCTGGAGATCACAGCCCACAATGAGCGCAAACC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTGCTCTTCTAGAGTGTaGGTCTCAAACCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWCSSRV*VSNPCG
Trigger: CCCACATGGGTTTGAGACCCACACTCTAGAAGAGCA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGAGACTGCTCCAGGATaGAGCAGCAGATGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEETAPG*SSRWPD
Trigger: ATCTGGCCATCTGCTGCTTCATCCTGGAGCAGTCTC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGCATGGCCTTCTTCTTaGGTACCCCAAGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQAWPSS*VPQASG
Trigger: CCCTGAGGCTTGGGGTACTCAAGAAGAAGGCCATGC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCCTGTAGGCTCAGGATaGCGCCCTCGATGGGCAATG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARPVGSG*RPRWAM
Trigger: CATTGCCCATCGAGGGCGTCATCCTGAGCCTACAGG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATGTGGTTCTCCTGGATaGTGTTCAGCACCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGCGSPG*CSAPQD
Trigger: GTCCTGAGGTGCTGAACATCATCCAGGAGAACCACA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATTGCACACACAGAGTaGGCACAGCACATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWIAHTE*AQHIQD
Trigger: GTCCTGGATGTGCTGTGCTCACTCTGTGTGTGCAAT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGCATCTCTCCTGTGGTaGCTGCTTCAAACTCGAAGT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHASLLW*LLQTRS
Trigger: ACTTCGAGTTTGAAGCAGTCACCACAGGAGAGATGC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGCCTCGATGCCCATTaGAGACATAGGCCAAATCGT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGLDAH*RHRPNR
Trigger: ACGATTTGGCCTATGTCTTCAATGGGCATCGAGGCC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGGCCTCGATGCCCATTaGAGACATAGGCCAAATCGT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRGLDAH*RHRPNR
Trigger: ACGATTTGGCCTATGTCTTCAATGGGCATCGAGGCC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTTCAGGTGGCCCACCTaGCCAGGTCCCAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAFRWPT*PGPKLQ
Trigger: CTGCAGCTTGGGACCTGGTCAGGTGGGCCACCTGAA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTTCAGGTGGCCCACCTaGCCAGGTCCCAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRFRWPT*PGPKLQ
Trigger: CTGCAGCTTGGGACCTGGTCAGGTGGGCCACCTGAA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGATGGTAGTCAGGAGTaGCCCAGCCCACCCACACGC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGADGSQE*PSPPTR
Trigger: GCGTGTGGGTGGGCTGGGTCACTCCTGACTACCATC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAGCAGTTGCTACACTTaGGGCTGCTGTGGACATTGC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRSSCYT*GCCGHC
Trigger: GCAATGTCCACAGCAGCCTCAAGTGTAGCAACTGCT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCTTTCCCATTGGCTGTaGAGGTCATTAAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLSHWL*RSLSRW
Trigger: CCACCGGCTTAATGACCTTCACAGCCAATGGGAAAG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGTCTCAGGGAGGTTGTaGCCCCAACGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGVSGRL*PQRQAG
Trigger: GCCTGCCTGGCGTTGGGGTCACAACCTCCCTGAGAC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACAAAACACGGGGGTaGGAAATGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRHKTRG*EMVWRS
Trigger: AGACCTCCACACCATTTCTCACCCCCGTGTTTTGTG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCACAAAACACGGGGGTaGGAAATGGTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWHKTRG*EMVWRS
Trigger: AGACCTCCACACCATTTCTCACCCCCGTGTTTTGTG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCAGCAGGTCTTGGTaGAAGTTGACTAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVASRSW*KLTNSC
Trigger: ACAGGAGTTAGTCAACTTTCACCAAGACCTGCTGGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGCCGATGCAGGAGGCTaGACATGGCACGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRADAGG*TWHGPA
Trigger: AGCTGGTCCGTGCCATGTTCAGCCTCCTGCATCGGC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTGCACAATGAGCAGTaGGCGGATCTGGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLHNEQ*ADLAQA
Trigger: TGCCTGGGCCAGATCCGCTCACTGCTCATTGTGCAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAACACCCTGCCAGGTATaGCACAACCTTTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGTPCQV*HNLFQV
Trigger: GACCTGGAAAAGGTTGTGTCATACCTGGCAGGGTGT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCCACGCTCTCACCGTTaGCAAAGACAGCAAAACGCA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRPRSHR*QRQQNA
Trigger: TGCGTTTTGCTGTCTTTGTCAACGGTGAGAGCGTGG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGCTCTTCCTCAGAGGTaGCCCCGAAGTTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRALPQR*PRSWPS
Trigger: GCTGGGCCAACTTCGGGGTCACCTCTGAGGAAGAGC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGATATGTGAAGACAGTTaGCCACAGCTGGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRICEDS*PQLGHP
Trigger: CGGATGCCCCAGCTGTGGTCAACTGTCTTCACATAT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGAGCGTGCCAATATGTaGAGACAGTTGACCACAGCT +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRERANM*RQLTTA
Trigger: AGCTGTGGTCAACTGTCTTCACATATTGGCACGCTC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACCCCGATTTCTGCCATaGGCCTTTCTAGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEPRFLP*AFLALG
Trigger: TCCCAGTGCTAGAAAGGCTCATGGCAGAAATCGGGG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGACTGCGGACACTTCCTaGACTCTGCGCACGATTTTC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRTADTS*TLRTIF
Trigger: GAAAATCGTGCGCAGAGTTCAGGAAGTGTCCGCAGT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAACCAGTAGAAGTCACTaGTGGATTCCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGTSRSH*WIPAAA
Trigger: TGCGGCTGCAGGAATCCATCAGTGACTTCTACTGGT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTTCCCTGTTCCTCGATaGCATCCTTGCCCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVFPVPR*HPCPSN
Trigger: ATTACTCGGGCAAGGATGTCATCGAGGAACAGGGAA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAATCTGGCTGGAGTCCTaGGCCAGCTTCATCATCATG +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGIWLES*ASFIIM
Trigger: CATGATGATGAAGCTGGCTCAGGACTCCAGCCAGAT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCACGGTTGGTCTCTaGGATCTCAAAATAGATCCG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGTVGL*DLKIDP
Trigger: CGGATCTATTTTGAGATCTCAGAGACCAACCGTGCC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGACAGTTGTAGCCAATaGTGCAGAGAAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVDSCSQ*CRERPP
Trigger: TGGTGGCCTTTCTCTGCATCATTGGCTACAACTGTC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTGGTGCGGAGCGTCTTaGCTCCCATGGCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARWCGAS*LPWRCP
Trigger: TGGACATCGCCATGGGAGTCAAGACGCTCCGCACCA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACATTGTGAGTGACAGATaGAAGGATGGTGCGGAGCGT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHIVSDR*KDGAER
Trigger: ACGCTCCGCACCATCCTTTCATCTGTCACTCACAAT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCTTTCCATTGTGAGTaGCAGATGAAAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWAFHCE*QMKGWC
Trigger: GCACCATCCTTTCATCTGTCACTCACAATGGAAAGC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCGAAGAAGAAAAAGGTaGTGTCGAAGACGACCCGGT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHRRRKR*CRRRPG
Trigger: ACCGGGTCGTCTTCGACATCACCTTTTTCTTCTTCG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGAAAGCAAAGGCGGTTaGCGAACCCCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARESKGG*RTPQRP
Trigger: TGGCCGCTGAGGGGTTCGGCAACCGCCTTTGCTTTC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCGAACTGACAGAGACTaGTCCAGGATGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWRTDRD*SRMKQQ
Trigger: CTGCTGCTTCATCCTGGAGCAGTCTCTGTCAGTTCG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCATACGACTGTGTGCGTaGCGGAGCAGGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARIRLCA*RSRMAW
Trigger: CCACGCCATCCTGCTCCGGCACGCACACAGTCGTAT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCTCCTTCAGACCTCTaGTTTGAGGCTGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSPSDL*FEAGCI
Trigger: GATGCACCCAGCCTCAAAGCAGAGGTCTGAAGGAGA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGCCTGGGACTCCTCCTaGTGGCATCGCGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAAWDSS*WHRVSD
Trigger: GTCACTGACGCGATGCCAGCAGGAGGAGTCCCAGGC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTGCGCAGCTTGGTCTaGTTCTCCTCGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLRSLV*FSSCCS
Trigger: GCTGCAGCACGAGGAGAAGCAGACCAAGCTGCGCAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTACAGCCACACCATTaGACACACAGAGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVVQPHH*THRVST
Trigger: TGTGCTCACTCTGTGTGTGCAATGGTGTGGCTGTAC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGATTCAAAGACACCCTaGACGGGGCAGCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRDSKTP*TGQPLI
Trigger: TATCAACGGCTGCCCCGTGCAGGGTGTCTTTGAATC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTCCATCCTTGCTCAATaGGAGTCAGTGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHSILAQ*ESVPRV
Trigger: AACTCTGGGCACTGACTCGCATTGAGCAAGGATGGA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCTTCTCATCTGCCATaGCCACGTGGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRPSHLP*PRGSPG
Trigger: CCCTGGGCTGCCACGTGGGCATGGCAGATGAGAAGG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCTTCAGGTTGTCTTCTaGCTTCTCATCTGCCATGCC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVLQVVF*LLICHA
Trigger: GGCATGGCAGATGAGAAGGCAGAAGACAACCTGAAG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCTCGCCCAGACATTGTaGCCGTTCTCTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRLAQTL*PFSASR
Trigger: CCGGCTGGCAGAGAACGGGCACAATGTCTGGGCGAG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGCGGCCGCTCTGGACTaGATAGGACTTCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAAAALD*IGLLCP
Trigger: CGGGCAGAGAAGTCCTATGCAGTCCAGAGCGGCCGC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGCCCAAATGGCTCACTaGCCAAGTGCCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRAQMAH*PSASAG
Trigger: GCCAGCGCTGGCACTTGGGCAGTGAGCCATTTGGGC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAACGACATCGCCCGACTaGCAGGGGCGCCCAAATGGC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGTTSPD*QGRPNG
Trigger: GCCATTTGGGCGCCCCTGGCAGTCGGGCGATGTCGT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGTGGTAACTGGGCGTTaGATGTTGATGGCGAACGGC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRVVTGR*MLMANG
Trigger: GCCGTTCGCCATCAACATGCAACGCCCAGTTACCAC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGCGGTGCAGCGGAAGTaGTGGTGGAACTGGACCGGA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRAVQRK*WWNWTG
Trigger: TCCGGTCCAGTTCCACCAGCACTTCCGCTGCACCGC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGGCATGATGTTCTTCTaGTTCCCCAGCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRGMMFF*FPSSNW
Trigger: CCAGTTTGAGCTGGGGAAGCAGAAGAACATCATGCC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACCTGGTCCACGTGGCTaGACAGGGCATGAGCCACGC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGPGPRG*TGHEPR
Trigger: GCGTGGCTCATGCCCTGTGCAGCCACGTGGACCAGG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGACTCCACCCGGTGCTaGAGCTCTTGGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRDSTRC*SSWSQK
Trigger: TTTCTGTGACCAAGAGCTGCAGCACCGGGTGGAGTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGTCCACATAACACTCTaGAAAGGCCGCCAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRVHITL*KGRQGL
Trigger: GAGTCCTTGGCGGCCTTTGCAGAGTGTTATGTGGAC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAGCGACCCCGCTGGTTaGCCTGCATCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQSDPAG*PASCPH
Trigger: ATGTGGACAAGATGCAGGGCAACCAGCGGGGTCGCT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGGCGGCTTCCCAGAGTaGTCTCCTCCTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRGGFPE*SPPLAP
Trigger: AGGAGCCAGAGGAGGAGAGCACTCTGGGAAGCCGCC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGTGTGGAGCCCTGCATaGCCAGGCCAATGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAVWSPA*PGQCRC
Trigger: ACAGCGGCATTGGCCTGGGCATGCAGGGCTCCACAC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCCACATCCAGCACATaGAGCAAGAAGTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPTSST*SKKSWF
Trigger: GAACCAGGACTTCTTGCTGCATGTGCTGGATGTGGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCGTCGAAGCAGGTGCTaGAGCATGGACGGGCGGATA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARRRSRC*SMDGRI
Trigger: TATCCGCCCGTCCATGCTGCAGCACCTGCTTCGACG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCAGAGAATCAAAGATaGCCCAGAAGAGCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPENQR*PRRACV
Trigger: CACGCAAGCTCTTCTGGGGCATCTTTGATTCTCTGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCTCATGGGTGTACTCTaGGAACTTGTTAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGLMGVL*ELVNEG
Trigger: TCCTTCATTAACAAGTTCGCAGAGTACACCCATGAG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTGGTGCTGGGCGATGTaGTGGAAGAGGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARWCWAM*WKRVVR
Trigger: CCTCACCACCCTCTTCCAGCACATCGCCCAGCACCA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCTCTGTCAGCCAGTGTaGCCTGTTGTTGTCTACGTA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVLCQPV*PVVVYV
Trigger: TACGTAGACAACAACAGGGCACACTGGCTGACAGAG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGTACAGGGGCGTCATaGGGAAACAGGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQCTGAS*GNRPPQ
Trigger: CTGTGGTGGCCTGTTTCCGCATGACGCCCCTGTACA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCAGGCACTGATCATCTaGAGTACCATCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRQALII*STISAA
Trigger: TGCTGCTGAGATGGTACTGCAGATGATCAGTGCCTG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGACGCTGCACGTTTaGATCAGCGCCTGGATACTC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRTLHV*ISAWIL
Trigger: GAGTATCCAGGCGCTGATGCAAACGTGCAGCGTCCT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCGTCCTCGTTCACCATaGCCAGCCCCTCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARRPRSP*PAPLPC
Trigger: ACAAGGCAGAGGGGCTGGGCATGGTGAACGAGGACG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTGGAAATCATTGTTGTaGCCCTCGCAGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRWKSLL*PSQSSC
Trigger: GCAGCTGCTCTGCGAGGGGCACAACAATGATTTCCA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACTCCTCAGCCTCCTCTaGGCCCTCGTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGLLSLL*ALVLVL
Trigger: GAGGACGAGGACGAGGGCGCAGAGGAGGCTGAGGAG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGAATTCTTCCAGGCCTaGTCCTCCAGCTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWEFFQA*SSSFLL
Trigger: AAGGAGGAAGCTGGAGGAGCAGGCCTGGAAGAATTC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGATGTCTTCCTTCACTTaGTCTTGTTGGTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWMSSFT*SCWSRS
Trigger: GCTCCGAGACCAACAAGAGCAAGTGAAGGAAGACAT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTGTGGGCCTTGCTaGCATCAACCACCACAAGGC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQWCGPC*HQPPQG
Trigger: GCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACCA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGACTCCTCCTGCTaGCATCGCGTCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQWDSSC*HRVSDN
Trigger: GTTGTCACTGACGCGATGCCAGCAGGAGGAGTCCCA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAGAAGAGCGCACAGTTaGTGCGATTGCCACGGATCA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRRAHS*CDCHGS
Trigger: TGATCCGTGGCAATCGCACCAACTGTGCGCTCTTCT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGAGCGCACAGTTaGTGCGATTGCCACGGATCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWRRAHS*CDCHGS
Trigger: TGATCCGTGGCAATCGCACCAACTGTGCGCTCTTCT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCGGTGATGAGGTCCTaGTTGGAGCGTACAGCCACA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESVMRS*LERTAT
Trigger: TGTGGCTGTACGCTCCAACCAGGACCTCATCACCGA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTACTCTTTGATGGGTTaGAGATGGAGCCGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWYSLMG*RWSRSR
Trigger: TCGGGAGCGGCTCCATCTCCAACCCATCAAAGAGTA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATCTGCCATGCCCACGTaGCAGCCCAGGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSAMPT*QPRASR
Trigger: TCTGCTGGCCCTGGGCTGCCACGTGGGCATGGCAGA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGGCGTCAGCCTCACGTaGCTCAGGTCCAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGGVSLT*LRSRGA
Trigger: GGCTCCTCTGGACCTGAGCCACGTGAGGCTGACGCC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCAGGGGCGCCCAAATaGCTCACTGCCCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPGAPK*LTAQVP
Trigger: TGGCACTTGGGCAGTGAGCCATTTGGGCGCCCCTGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGCTCAAAGCCTTCCTaGAGGCCACAGATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGSKPS*RPQMAK
Trigger: TTTTGCCATCTGTGGCCTCCAGGAAGGCTTTGAGCC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGAGTGGAAGGTGGTTaGGTCATCATGGCAACCTTC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGVEGG*VIMATF
Trigger: GAAGGTTGCCATGATGACCCAACCACCTTCCACTCC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCCACGTTCTGGTGGGTaGGCAGCACGAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARPRSGG*AARRQQ
Trigger: CTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATTCCCCAGCTCAAACTaGACCACGTTCTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEFPSSN*TTFWWV
Trigger: CACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATCCACCTGTAGGAAGTaGTTGGGCATTCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRSTCRK*LGIRLH
Trigger: GTGGAGCCGAATGCCCAACCACTTCCTACAGGTGGA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCACCGGGACGAACTaGAACTCCACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSTGTN*NSTEPP
Trigger: TGGGGGCTCTGTGGAGTTCCAGTTCGTCCCGGTGCT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGAGCTTGTCACCATCTTaGGGAAGCGGATCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSLSPS*GSGSPL
Trigger: CAAAGGAGATCCGCTTCCCCAAGATGGTGACAAGCT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTCAGGTGGTCAAACATaGAGCGCTGGTTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQSGGQT*SAGSAG
Trigger: GCCGGCAGAACCAGCGCTCCATGTTTGACCACCTGA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACTTTGGCCAGAAGCATaGGGCAGCTTTGTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGLWPEA*GSFVSH
Trigger: GTGGCTTACAAAGCTGCCCCATGCTTCTGGCCAAAG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCATCTTTGCCCAGGGTaGGGATCTGCAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARHLCPG*GSAVGG
Trigger: GCCTCCCACTGCAGATCCCCACCCTGGGCAAAGATG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCAGGTGCTGCAGCATaGACGGGCGGATATACCTGC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARAGAAA*TGGYTC
Trigger: GCAGGTATATCCGCCCGTCCATGCTGCAGCACCTGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGAAGGCCCACTTCTCATaGGTGTACTCTGCGAACTTG +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRKAHFS*VYSANL
Trigger: CAAGTTCGCAGAGTACACCCATGAGAAGTGGGCCTT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACCTCCTCGCCTTCCCTaGCCTTCTCTACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEPPRLP*PSLLSI
Trigger: AATGGACAGTAGAGAAGGCCAGGGAAGGCGAGGAGG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACAATCTCCTGTTCATGTaGGGATTTCTCCACCCGTCC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHNLLFM*GFLHPS
Trigger: GGACGGGTGGAGAAATCCCCACATGAACAGGAGATT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTCCTTGTTGGAGGCATaGCCACCACTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQSLLEA*PPLPST
Trigger: AGTGCTGGGCAGTGGTGGCCATGCCTCCAACAAGGA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAACAGTTGACCACAGCTaGGGCATCCGTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGETVDHS*GIRPKE
Trigger: CTCTTTGGGACGGATGCCCCAGCTGTGGTCAACTGT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGATGGTAGGGATGAAGTaGGAGCGTAGGAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQMVGMK*ERRSSG
Trigger: GCCGGAGCTCCTACGCTCCCACTTCATCCCTACCAT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCCTCCGGCGCTGCTTaGACAGAAGTTTATGCCACA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPSGAA*TEVYAT
Trigger: TGTGGCATAAACTTCTGTCCAAGCAGCGCCGGAGGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACAAGTGTAGGACCAACTaGTGTAAGGGGTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHKCRTN*CKGSGF
Trigger: GAAGCCAGACCCCTTACACCAGTTGGTCCTACACTT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTGCAGCCTTGACTGCTaGTACAGGAGCCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRCSLDC*YRSLCF
Trigger: GAAACAGAGGCTCCTGTACCAGCAGTCAAGGCTGCA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTACCCAGCTTCAGGGTaGAAGACACCATGGCACCCG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQYPASG*KTPWHP
Trigger: CGGGTGCCATGGTGTCTTCCACCCTGAAGCTGGGTA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGCTTCTGGCTGTCCATaGCCTTCTGGAAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRASGCP*PSGSPS
Trigger: AGAAGGACTTCCAGAAGGCCATGGACAGCCAGAAGC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTGGGGCATCTCCCACTaGGCACGGTTGGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARWGISH*ARLVSE
Trigger: CTCAGAGACCAACCGTGCCCAGTGGGAGATGCCCCA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAACGTCGAAGATGAACTaGCGCTTGGACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGTSKMN*RLDSFT
Trigger: GGTGAAGGAGTCCAAGCGCCAGTTCATCTTCGACGT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCTTCCTCCTTCTTTaGAGGGGGTGGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESFLLL*RGWRWC
Trigger: ACACCACCTCCACCCCCTCCAAAGAAGGAGGAAGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCATGGCCTTCTTCTTaGGTACCCCAAGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARAWPSS*VPQASG
Trigger: CCCTGAGGCTTGGGGTACTCAAGAAGAAGGCCATGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCTGTAGGCTCAGGATaGCGCCCTCGATGGGCAATG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRPVGSG*RPRWAM
Trigger: CATTGCCCATCGAGGGCGTCATCCTGAGCCTACAGG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGACGATCCAGCTTGCTaGCCAGCCAATCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRDDPAC*PANPSL
Trigger: CAAACTTGGATTGGCTGGTCAGCAAGCTGGATCGTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAGAGCCCATCGAGGTTaGAGGATTCAAAGACACCCT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRAHRG*RIQRHP
Trigger: AGGGTGTCTTTGAATCCTTCAACCTCGATGGGCTCT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGTGCCCAGAGTTCATaGATGTTCTCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWSAQSS*MFSASF
Trigger: GAAGCTGGCAGAGAACATTCATGAACTCTGGGCACT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGACTGGCTGTCCACCTaGCTGGGCTCCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGDWLST*LGSWSG
Trigger: TCCTGACCAGGAGCCCAGTCAGGTGGACAGCCAGTC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGGCACAGGCTCAAACTaGGGAAGACTCTTGCTAAAC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGGTGSN*GRLLLN
Trigger: GTTTAGCAAGAGTCTTCCTCAGTTTGAGCCTGTGCC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGCCGATGCAGGAGGCTaGACATGGCACGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGADAGG*TWHGPA
Trigger: AGCTGGTCCGTGCCATGTTCAGCCTCCTGCATCGGC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAGACTTTGTTATTCATaGTGTTCCCAATGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRRLCYS*CSQCSG
Trigger: TCCAGAGCATTGGGAACATCATGAATAACAAAGTCT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCTGGTTCTGCCGGCTaGTTCGGCAGAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARAGSAG*FGRSSR
Trigger: TCTGCTACTTCTGCCGAATCAGCCGGCAGAACCAGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACACCCTGCCAGGTATaGCACAACCTTTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRTPCQV*HNLFQV
Trigger: GACCTGGAAAAGGTTGTGTCATACCTGGCAGGGTGT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCACGCTCTCACCGTTaGCAAAGACAGCAAAACGCA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPRSHR*QRQQNA
Trigger: TGCGTTTTGCTGTCTTTGTCAACGGTGAGAGCGTGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGCTCTTCCTCAGAGGTaGCCCCGAAGTTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGALPQR*PRSWPS
Trigger: GCTGGGCCAACTTCGGGGTCACCTCTGAGGAAGAGC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCTCCAGGTGGGCGATaGACTCCTGGGAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPPGGR*TPGRCP
Trigger: TGGACATCTCCCAGGAGTTCATCGCCCACCTGGAGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCGTGCCAATATGTaGAGACAGTTGACCACAGCT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGERANM*RQLTTA
Trigger: AGCTGTGGTCAACTGTCTTCACATATTGGCACGCTC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAAAAGGACATGTTGTTaGTTTCATTCTGGACCACGA +
Preference number: 4 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRKRTCC*FHSGPR
Trigger: TCGTGGTCCAGAATGAAATCAACAACATGTCCTTTT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCTCCTTTGCAGGCACTaGTCATCTGCAGTACCATCT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLLCRH*SSAVPS
Trigger: AGATGGTACTGCAGATGATCAGTGCCTGCAAAGGAG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCTCCTTTGCAGGCACTaGTCATCTGCAGTACCATCT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLLCRH*SSAVPS
Trigger: AGATGGTACTGCAGATGATCAGTGCCTGCAAAGGAG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGCCTCTCGAAGGCATTaGGGTCCAGGACGCTGCACG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGASRRH*GPGRCT
Trigger: CGTGCAGCGTCCTGGACCTCAATGCCTTCGAGAGGC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTTCCCTGTTCCTCGATaGCATCCTTGCCCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRFPVPR*HPCPSN
Trigger: ATTACTCGGGCAAGGATGTCATCGAGGAACAGGGAA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAGCTGCTTTCCATTGTaGGTGACAGATGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWSCFPL*VTDERM
Trigger: CATCCTTTCATCTGTCACTCACAATGGAAAGCAGCT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATTCTTGGTGCGTTCCTaGTCTGAGCCACCTGACTGT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRFLVRS*SEPPDC
Trigger: ACAGTCAGGTGGCTCAGATCAGGAACGCACCAAGAA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATTCTTGGTGCGTTCCTaGTCTGAGCCACCTGACTGT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEFLVRS*SEPPDC
Trigger: ACAGTCAGGTGGCTCAGATCAGGAACGCACCAAGAA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACGAACTGACAGAGACTaGTCCAGGATGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRTDRD*SRMKQQ
Trigger: CTGCTGCTTCATCCTGGAGCAGTCTCTGTCAGTTCG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCTGCGCAGCTTGGTCTaGTTCTCCTCGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGALRSLV*FSSCCS
Trigger: GCTGCAGCACGAGGAGAAGCAGACCAAGCTGCGCAG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGTCGGTTGCGCAGGCTaGGCAGCTTGGTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAVGCAG*AAWSAS
Trigger: AGAAGCAGACCAAGCTGCGCAGCCTGCGCAACCGAC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAGAGGCTCTGTCGGTTaGGCAGGCTGCGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGRGSVG*AGCAAW
Trigger: CCAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAGAGCGCACAGTTGGTaGGATTGCCACGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQRAHSW*DCHGSE
Trigger: CTCTGATCCGTGGCAATCGCACCAACTGTGCGCTCT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGTACAGCCACACCATTaGACACACAGAGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRVQPHH*THRVST
Trigger: TGTGCTCACTCTGTGTGTGCAATGGTGTGGCTGTAC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTGCGTGGAGCCCTCTaGTCGGCCCACAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLRGAL*SAHKDV
Trigger: AACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCCTCAAAGTACCATTTaGCATACTGCGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRPQSTI*HTAWSP
Trigger: AGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCTCAAAGTACCATTTaGCATACTGCGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPQSTI*HTAWSP
Trigger: AGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCCATCCTTGCTCAATaGGAGTCAGTGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSILAQ*ESVPRV
Trigger: AACTCTGGGCACTGACTCGCATTGAGCAAGGATGGA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTCCATCCTTGCTCAATaGGAGTCAGTGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWSILAQ*ESVPRV
Trigger: AACTCTGGGCACTGACTCGCATTGAGCAAGGATGGA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTCACAAGACATGGGTaGAGCCTCTTGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHFTRHG*SLLLSS
Trigger: GGATGACAACAAGAGGCTGCACCCATGTCTTGTGAA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCTTCAGGTTGTCTTCTaGCTTCTCATCTGCCATGCC +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLQVVF*LLICHA
Trigger: GGCATGGCAGATGAGAAGGCAGAAGACAACCTGAAG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAGGCTGTCCCTATTaGTGCGCTTGGTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARRGCPY*CAWWPR
Trigger: ACGAGGCCACCAAGCGCAGCAATAGGGACAGCCTCT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGACCAGGTCCCAAGCTaGAGACTGGCAGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRDQVPS*RLAGSR
Trigger: ACGGCTTCCTGCCAGTCTGCAGCTTGGGACCTGGTC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTGGCAGTTCCATCCTTaGCCCCTTCAGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRWQFHP*PLQPLP
Trigger: GGGGAGAGGCTGAAGGGGGCAAGGATGGAACTGCCA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTGGCAGTTCCATCCTTaGCCCCTTCAGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAWQFHP*PLQPLP
Trigger: GGGGAGAGGCTGAAGGGGGCAAGGATGGAACTGCCA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGCATGATGTTCTTCTaGTTCCCCAGCTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGMMFF*FPSSNW
Trigger: CCAGTTTGAGCTGGGGAAGCAGAAGAACATCATGCC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCGGGCAGCTTCATCTaGAGCAGCCCCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSGSFI*SSPSSS
Trigger: GCTTGAGGAGGGGCTGCTGCAGATGAAGCTGCCCGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAAGGACTCCACCCGGTaGTGCAGCTCTTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARKDSTR*CSSWSQ
Trigger: CTGTGACCAAGAGCTGCAGCACCGGGTGGAGTCCTT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCGACCCCGCTGGTTaGCCTGCATCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSDPAG*PASCPH
Trigger: ATGTGGACAAGATGCAGGGCAACCAGCGGGGTCGCT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAATAGCATGTTGATCTaGTCCTGGGGTGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRNSMLI*SWGGER
Trigger: CCGTTCTCCACCCCAGGAGCAGATCAACATGCTATT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCTGGATTCCACAATGTaGCAGCAGGTCTTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRLDSTM*QQVLVK
Trigger: TTTCACCAAGACCTGCTGGCACATTGTGGAATCCAG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCGGCTTCCCAGAGTaGTCTCCTCCTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGGGFPE*SPPLAP
Trigger: AGGAGCCAGAGGAGGAGAGCACTCTGGGAAGCCGCC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCGAGCCCGTCATACTaGCGATGCAGGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPSPSY*RCRRLN
Trigger: GTTCAGCCTCCTGCATCGGCAGTATGACGGGCTCGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAAGGGTGTGGAGCCCTaGATGCCCAGGCCAATGCCG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGKGVEP*MPRPMP
Trigger: CGGCATTGGCCTGGGCATGCAGGGCTCCACACCCTT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGACCTTTTCCAGGTCTTaGTCTTGTAATGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWTFSRS*SCNAKA
Trigger: AGCCTTGGCATTACAAGAGCAAGACCTGGAAAAGGT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCCAGGGTGGGGATCTaGAGTGGGAGGCTGATGATG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPRVGI*SGRLMM
Trigger: CATCATCAGCCTCCCACTGCAGATCCCCACCCTGGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAAGCACCATGGATaGCTTGTGGTCAGGCACGAA +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGEKHHG*LVVRHE
Trigger: TTCGTGCCTGACCACAAGGCATCCATGGTGCTTTTC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCAGAGAATCAAAGATaGCCCAGAAGAGCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPENQR*PRRACV
Trigger: CACGCAAGCTCTTCTGGGGCATCTTTGATTCTCTGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGTTGTGGTAATTTTCTaGCAGTTGTTCGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHVVVIF*QLFGHG
Trigger: GCCATGGCCGAACAACTGGCAGAAAATTACCACAAC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCCAGAGAGTAGATACTaGAGAGCGTTCGGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRPESRY*RAFGSK
Trigger: CTTGCTACCGAACGCTCTGCAGTATCTACTCTCTGG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCTCTGTCAGCCAGTGTaGCCTGTTGTTGTCTACGTA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLCQPV*PVVVYV
Trigger: TACGTAGACAACAACAGGGCACACTGGCTGACAGAG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGACACTTCCTGAACTCTaGGCACGATTTTCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRTLPEL*ARFSRD
Trigger: ATCCCGAGAAAATCGTGCGCAGAGTTCAGGAAGTGT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACAGGTGGCAGCTCTTTaGCATGATGTCAGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEQVAAL*HDVSVS
Trigger: GCTTACGCTGACATCATGGCAAAGAGCTGCCACCTG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCAGGCACTGATCATCTaGAGTACCATCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWQALII*STISAA
Trigger: TGCTGCTGAGATGGTACTGCAGATGATCAGTGCCTG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCTTCATCATCATGTaGGCGAACACGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWSFIIM*ANTCRK
Trigger: CTTCCTGCACGTGTTCGCGCACATGATGATGAAGCT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCTCGGAGATCTGAGCTaGGATCTGCATCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVLGDLS*DLHLKD
Trigger: ATCTTTGAGATGCAGATCGCAGCTCAGATCTCCGAG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGAGAGGCCAGATCCATaGCCAGCAGCTCCGCAATCC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRERPDP*PAAPQS
Trigger: GGATTGCGGAGCTGCTGGGCATGGATCTGGCCTCTC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGAGAGGCCAGATCCATaGCCAGCAGCTCCGCAATCC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAERPDP*PAAPQS
Trigger: GGATTGCGGAGCTGCTGGGCATGGATCTGGCCTCTC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGTGCCGGAGCAGGATaGCGTGGCCATACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGARAGAG*RGHTRV
Trigger: CACTCTTGTATGGCCACGCCATCCTGCTCCGGCACG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGCAGGCTGCGCAGCTTaGTCTGCTTCTCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAAGCAA*SASPRA
Trigger: AGCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCAAGACGATCTGGATaGTGTCCACAGGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRARRSG*CPQDRV
Trigger: TACCCTGTCCTGTGGACACCATCCAGATCGTCTTGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCAAGACGATCTGGATaGTGTCCACAGGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEARRSG*CPQDRV
Trigger: TACCCTGTCCTGTGGACACCATCCAGATCGTCTTGC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGGTTCTGGCAAGCTGTaGAAATTCACAAGACATGGG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHGSGKL*KFTRHG
Trigger: CCCATGTCTTGTGAATTTCCACAGCTTGCCAGAACC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAGGGAGCTCACATCCTaGCCCAGGTTCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGRELTS*PRFRWP
Trigger: GGGCCACCTGAACCTGGGCCAGGATGTGAGCTCCCT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAAGGGAGCTCACATCCTaGCCCAGGTTCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGRELTS*PRFRWP
Trigger: GGGCCACCTGAACCTGGGCCAGGATGTGAGCTCCCT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAAACCAGGTGGTAACTaGGCGTTGCATGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWKPGGN*ALHVDG
Trigger: GCCATCAACATGCAACGCCCAGTTACCACCTGGTTT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCAGCGGAAGTGCTGGTaGAACTGGACCGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARQRKCW*NWTGRL
Trigger: AAGCCTTCCGGTCCAGTTCCACCAGCACTTCCGCTG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGTGCAGCGGAAGTGCTaGTGGAACTGGACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAVQRKC*WNWTGR
Trigger: CCTTCCGGTCCAGTTCCACCAGCACTTCCGCTGCAC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGGGGAAGAGCCGGAGTaGAAGGTGGTTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARGEEPE*KVVGSS
Trigger: TGATGACCCAACCACCTTCCACTCCGGCTCTTCCCC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATGACAAGGTCTGTGTaGCTGATTCGGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRMTRSV*LIRPCC
Trigger: ACAGCAGGGCCGAATCAGCCACACAGACCTTGTCAT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCACGTTCTGGTGGGTaGGCAGCACGAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRPRSGG*AARRQQ
Trigger: CTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAAATACTCCAGGAGGTaGCACATCTGTAATTTCACA +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGKYSRR*HICNFT
Trigger: TGTGAAATTACAGATGTGCCACCTCCTGGAGTATTT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCAGCGCACCACTGTGTaGGACACCAGCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAQRTTV*DTSSCK
Trigger: CTTGCAGGAGCTGGTGTCCCACACAGTGGTGCGCTG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGACTCCAGCAGGCTCATaGTATCCTCCACCGAGGACA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQTPAGS*YPPPRT
Trigger: TGTCCTCGGTGGAGGATACCATGAGCCTGCTGGAGT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGATGTTCCCAATGCTCTaGATCATAAGGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWMFPML*IIRFSS
Trigger: GGAGGAGAACCTTATGATCCAGAGCATTGGGAACAT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCGCTCTCATCAGGTTTaGGTGTTGGTAGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWRSHQV*VLVEDF
Trigger: AAAGTCTTCTACCAACACCCAAACCTGATGAGAGCG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCATCTTTGCCCAGGGTaGGGATCTGCAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRHLCPG*GSAVGG
Trigger: GCCTCCCACTGCAGATCCCCACCCTGGGCAAAGATG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTAAGGAGCTTGAGTaGCATCTTGGCGAACTCATT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGKELE*HLGELI
Trigger: AATGAGTTCGCCAAGATGCCACTCAAGCTCCTTACC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTTGGCCCAGCCTGTaGGGAGGCAGTAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSWPSL*GGSSTS
Trigger: GGAAGTACTACTGCCTCCCCACAGGCTGGGCCAACT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTGTAGGGTCTCAGCATaGGGTGGGTCTTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHCRVSA*GGSSIL
Trigger: AAGAATTGAAGACCCACCCCATGCTGAGACCCTACA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAACTTCAGCAACTCCTaGGCCTTCTCTCGATCCCGT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRNFSNS*AFSRSR
Trigger: ACGGGATCGAGAGAAGGCCCAGGAGTTGCTGAAGTT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGCGATGAACTCCTaGGAGATGTCCATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQWAMNS*EMSIQR
Trigger: TCGCTGGATGGACATCTCCCAGGAGTTCATCGCCCA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTCCTTGTTGGAGGCATaGCCACCACTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSLLEA*PPLPST
Trigger: AGTGCTGGGCAGTGGTGGCCATGCCTCCAACAAGGA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGACAGTTGACCACAGCTaGGGCATCCGTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQTVDHS*GIRPKE
Trigger: CTCTTTGGGACGGATGCCCCAGCTGTGGTCAACTGT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCACATAGGGGTTCCTaGTGGTTCCCAGAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPHRGS*WFPESR
Trigger: TCTACTCTCTGGGAACCACCAGGAACCCCTATGTGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCCTCCGGCGCTGCTTaGACAGAAGTTTATGCCACA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPSGAA*TEVYAT
Trigger: TGTGGCATAAACTTCTGTCCAAGCAGCGCCGGAGGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAAAGTGTAGGACCAACTaGTGTAAGGGGTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGKCRTN*CKGSGF
Trigger: GAAGCCAGACCCCTTACACCAGTTGGTCCTACACTT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCGCCTGGATACTCTaGAAGAAGCCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESAWIL*KKPTSF
Trigger: GAAGGAAGTGGGCTTCTTCCAGAGTATCCAGGCGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGCGCCAGACTCTGCTaGTTTCCGGTGCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGCARLC*FPVQGP
Trigger: GGGACCCTGCACCGGAAACCAGCAGAGTCTGGCGCA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCAGTGAACTGCTTCTaGCTGTCCATGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPVNCF*LSMAFW
Trigger: CCAGAAGGCCATGGACAGCCAGAAGCAGTTCACTGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACAGGAACTGGATCTCTaGGCCAGTGAACTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEQELDL*ASELLL
Trigger: CAGAAGCAGTTCACTGGCCCAGAGATCCAGTTCCTG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGCCAATGTCCCGTGCTaGTTCCTGGAAGCGGTTCGC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRANVPC*FLEAVR
Trigger: GCGAACCGCTTCCAGGAACCAGCACGGGACATTGGC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGAGGTGGTGTCTTCTTaGGGGGCTCTGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGREVVSS*GALEVA
Trigger: AGCCACCTCCAGAGCCCCCCAAGAAGACACCACCTC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTTTGCGCTCATTGTaGGCTGTGATCTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEGLRSL*AVISRE
Trigger: CTCTCTGGAGATCACAGCCCACAATGAGCGCAAACC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCCAAACTTCCAGATCTaGTATTTGACATCGATAGAC +
Preference number: 4 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGPNFQI*YLTSID
Trigger: GTCTATCGATGTCAAATACCAGATCTGGAAGTTTGG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTTCACTTGCTCTTGTTaGTCTCGGAGCTCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRFTCSC*SRSSPK
Trigger: TTTTGGGGAGCTCCGAGACCAACAAGAGCAAGTGAA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGTACGTCTCCTGCCTTaGCCATTTTGCTCTTATTGT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWVRLLP*PFCSYC
Trigger: ACAATAAGAGCAAAATGGCCAAGGCAGGAGACGTAC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCTGCAGGGCTCGAACTaGCAGAGACTGCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGALQGSN*QRLLQD
Trigger: ATCCTGGAGCAGTCTCTGTCAGTTCGAGCCCTGCAG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTGGATCGGGAGGTGGTaGGGCAACTCAGGTACATAC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARWIGRW*GNSGTY
Trigger: GTATGTACCTGAGTTGCCTCACCACCTCCCGATCCA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTTCAGACCTCTGCTTTaGGGCTGGGTGCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARFRPLL*GWVHRP
Trigger: TGGACGATGCACCCAGCCTCAAAGCAGAGGTCTGAA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTCATCCATATGTCCATaGAAGAGGCGCAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQSSICP*KRRRTW
Trigger: CCACGTCCTGCGCCTCTTTCATGGACATATGGATGA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCTCGAAGTAGCCAATaGGGTCCTGTAGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARARSSQ*GPVGSG
Trigger: TCCTGAGCCTACAGGACCTCATTGGCTACTTCGAGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGACATCCAGGACCTTGTaGTTCCGCCCATGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQTSRTL*FRPCLS
Trigger: AGACAAGCATGGGCGGAATCACAAGGTCCTGGATGT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGAGCCCATCGAGGTTaGAGGATTCAAAGACACCCT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRAHRG*RIQRHP
Trigger: AGGGTGTCTTTGAATCCTTCAACCTCGATGGGCTCT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGTGCCCAGAGTTCATaGATGTTCTCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESAQSS*MFSASF
Trigger: GAAGCTGGCAGAGAACATTCATGAACTCTGGGCACT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGTGCCCAGAGTTCATaGATGTTCTCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRSAQSS*MFSASF
Trigger: GAAGCTGGCAGAGAACATTCATGAACTCTGGGCACT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACCTCTTCTTCCTCCCTaGAGACTTCAGGCTCAATCA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEPLLPP*RLQAQS
Trigger: TGATTGAGCCTGAAGTCTTCAGGGAGGAAGAAGAGG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGCTGGTTCTGCCGGCTaGTTCGGCAGAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAAGSAG*FGRSSR
Trigger: TCTGCTACTTCTGCCGAATCAGCCGGCAGAACCAGC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCTTGGCGAACTCATTaGGGATGGGCACATCGAACA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESWRTH*GWAHRT
Trigger: TGTTCGATGTGCCCATCCTCAATGAGTTCGCCAAGA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACCTTCTCCTTGGCCGTaGGCGTGTCGTAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGPSPWP*ACRREP
Trigger: TGGTTCCCTACGACACGCTCACGGCCAAGGAGAAGG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTACAGAAGAGGCTGGTaGTCATTTCCTTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHYRRGW*SFPSPC
Trigger: ACAAGGAGAAGGAAATGATCACCAGCCTCTTCTGTA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACTCCTTTGCAGGCACTaGTCATCTGCAGTACCATCT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGELLCRH*SSAVPS
Trigger: AGATGGTACTGCAGATGATCAGTGCCTGCAAAGGAG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATTCCCTGTTCCTCGATaGCATCCTTGCCCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRFPVPR*HPCPSN
Trigger: ATTACTCGGGCAAGGATGTCATCGAGGAACAGGGAA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGTGGGGCACATGCTCTaGCAGGTTGGTAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRVGHML*QVGKQH
Trigger: GTGCTGCTTACCAACCTGTCAGAGCATGTGCCCCAC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGACAGTTGTAGCCAATaGTGCAGAGAAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRDSCSQ*CRERPP
Trigger: TGGTGGCCTTTCTCTGCATCATTGGCTACAACTGTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGACAGTTGTAGCCAATaGTGCAGAGAAAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEDSCSQ*CRERPP
Trigger: TGGTGGCCTTTCTCTGCATCATTGGCTACAACTGTC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAATTGTGAGTGACAGATaGAAGGATGGTGCGGAGCGT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEIVSDR*KDGAER
Trigger: ACGCTCCGCACCATCCTTTCATCTGTCACTCACAAT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGCTTTCCATTGTGAGTaGCAGATGAAAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWAFHCE*QMKGWC
Trigger: GCACCATCCTTTCATCTGTCACTCACAATGGAAAGC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCTTTCCATTGTGAGTaGCAGATGAAAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGAFHCE*QMKGWC
Trigger: GCACCATCCTTTCATCTGTCACTCACAATGGAAAGC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACGAAGAAGAAAAAGGTaGTGTCGAAGACGACCCGGT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRRRKR*CRRRPG
Trigger: ACCGGGTCGTCTTCGACATCACCTTTTTCTTCTTCG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATGCCTATTCCACAGATaGAGCACTTGGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGCLFHR*STWSPC
Trigger: ACATGGAGACCAAGTGCTTCATCTGTGGAATAGGCA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTGCCTATTCCACAGATaGAGCACTTGGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRCLFHR*STWSPC
Trigger: ACATGGAGACCAAGTGCTTCATCTGTGGAATAGGCA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGTACATACGACTGTGTaGGTGCCGGAGCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAVHTTV*VPEQDG
Trigger: GCCATCCTGCTCCGGCACGCACACAGTCGTATGTAC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTGCTTTGAGGCTGGGTaGATCGTCCACCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRCFEAG*IVHQQA
Trigger: GGCCTGTTGGTGGACGATGCACCCAGCCTCAAAGCA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGTCGGTTGCGCAGGCTaGGCAGCTTGGTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGVGCAG*AAWSAS
Trigger: AGAAGCAGACCAAGCTGCGCAGCCTGCGCAACCGAC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATTGATGAGGTTTGTCTaGAGCAGAAGTTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRLMRFV*SRSSRP
Trigger: GGGCCGAGAACTTCTGCTGCAGACAAACCTCATCAA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAGAGGCTGTCCCTATTaGTGCGCTTGGTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGARGCPY*CAWWPR
Trigger: ACGAGGCCACCAAGCGCAGCAATAGGGACAGCCTCT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATGCATAGGACTTCTCTaGCCGGAAGATGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGCIGLL*PEDAGP
Trigger: CGGGCCCGCATCTTCCGGGCAGAGAAGTCCTATGCA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCTCTCCTGTGGTGACTaGTTCAAACTCGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLSCGD*FKLEVP
Trigger: TGGTACTTCGAGTTTGAAGCAGTCACCACAGGAGAG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACTCTCCTGTGGTGACTaGTTCAAACTCGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGLSCGD*FKLEVP
Trigger: TGGTACTTCGAGTTTGAAGCAGTCACCACAGGAGAG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGACCAGGTCCCAAGCTaGAGACTGGCAGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGDQVPS*RLAGSR
Trigger: ACGGCTTCCTGCCAGTCTGCAGCTTGGGACCTGGTC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACAGGCATCAGCATCTaGACCTCCAGCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRTGISI*TSSLGG
Trigger: CCCACCAAGGCTGGAGGTGCAGATGCTGATGCCTGT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACGCATGCAACAGCTGTaGCTGGTCCACGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGRMQQL*LVHVAA
Trigger: TGCAGCCACGTGGACCAGGCACAGCTGTTGCATGCG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGATCTTCCTTCTCGTGTaGCTCTTCTTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRIFLLV*LFFFIL
Trigger: GAGGATGAAGAAGAAGAGGCACACGAGAAGGAAGAT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCTGGATTCCACAATGTaGCAGCAGGTCTTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLDSTM*QQVLVK
Trigger: TTTCACCAAGACCTGCTGGCACATTGTGGAATCCAG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCCGTCATACTGCCGATaGAGGAGGCTGAACATGGCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARPSYCR*RRLNMA
Trigger: TGCCATGTTCAGCCTCCTGCATCGGCAGTATGACGG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACCGAGCCCGTCATACTaGCGATGCAGGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGPSPSY*RCRRLN
Trigger: GTTCAGCCTCCTGCATCGGCAGTATGACGGGCTCGG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCCTGGGGACCCATCTaGACAATGAGCAGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSWGPI*TMSSER
Trigger: CCGCTCACTGCTCATTGTGCAGATGGGTCCCCAGGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTCCATGACTGTTTCATaGATACCCAGCGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWSMTVS*IPSALI
Trigger: GATGAGAGCGCTGGGTATGCATGAAACAGTCATGGA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGACCTTTTCCAGGTCTTaGTCTTGTAATGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVTFSRS*SCNAKA
Trigger: AGCCTTGGCATTACAAGAGCAAGACCTGGAAAAGGT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGAAAAGCACCATGGATaGCTTGTGGTCAGGCACGAA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWREKHHG*LVVRHE
Trigger: TTCGTGCCTGACCACAAGGCATCCATGGTGCTTTTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAACCATGATGGCGCGGTaGTCGGTGCCCGCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGTMMAR*SVPAKS
Trigger: ACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACGTCGAAGCAGGTGCTaGAGCATGGACGGGCGGATA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGRRSRC*SMDGRI
Trigger: TATCCGCCCGTCCATGCTGCAGCACCTGCTTCGACG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCAGAGAATCAAAGATaGCCCAGAAGAGCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPENQR*PRRACV
Trigger: CACGCAAGCTCTTCTGGGGCATCTTTGATTCTCTGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCGTCTCCGAACTGGTaGTGGGCGATGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASSPNW*WAMCWK
Trigger: CTTCCAGCACATCGCCCAGCACCAGTTCGGAGACGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAACCCTCCTCAGCTTCTaGCTTGGCTTCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGTLLSF*LGFQAQ
Trigger: CTGCGCCTGGAAGCCAAGGCAGAAGCTGAGGAGGGT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCCTGAACAGCTCCTCTaGATTGGGGTTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARPEQLL*IGVGLC
Trigger: ACAGAGCCCAACCCCAATGCAGAGGAGCTGTTCAGG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCCCTCTGCCTTGTTCTaGCTCTCGAAGGCATTGAGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARPSALF*LSKALR
Trigger: CCTCAATGCCTTCGAGAGGCAGAACAAGGCAGAGGG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACTGTGCGCCAGACTCTaGTGGTTTCCGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGLCARL*WFPVQG
Trigger: ACCCTGCACCGGAAACCAGCAGAGTCTGGCGCACAG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAATGTGCGCGAACACGTaGAGGAAGCCCACCACGGCA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGMCANT*RKPTTA
Trigger: TGCCGTGGTGGGCTTCCTGCACGTGTTCGCGCACAT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCTCGGAGATCTGAGCTaGGATCTGCATCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLGDLS*DLHLKD
Trigger: ATCTTTGAGATGCAGATCGCAGCTCAGATCTCCGAG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAATGTCTTCCTTCACTTaGTCTTGTTGGTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGMSSFT*SCWSRS
Trigger: GCTCCGAGACCAACAAGAGCAAGTGAAGGAAGACAT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCTGGTCCTCATACTaGTTGCGGAAACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRSWSSY*LRKQSP
Trigger: TGGAGACTGTTTCCGCAAGCAGTATGAGGACCAGCT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCTGGTCCTCATACTaGTTGCGGAAACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESWSSY*LRKQSP
Trigger: TGGAGACTGTTTCCGCAAGCAGTATGAGGACCAGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAGGAGGCGTCAACCTaGAGCTCCCCACTTGCGGTT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRKEAST*SSPLAV
Trigger: AACCGCAAGTGGGGAGCTCCAGGTTGACGCCTCCTT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTGGCCCCAGCGGAGATaGCTTCCACTCCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAWPQRR*LPLQLI
Trigger: AATCAGCTGGAGTGGAAGCCATCTCCGCTGGGGCCA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACCACCACAAGGCCTTaGTCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRTTTRP*SSVSPR
Trigger: CCTTGGGCTCACTGAGGACCAAGGCCTTGTGGTGGT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGAAGTAGCCTTGGTGTaGGCCTTGCTGGCATCAACC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGAREVALV*ALLAST
Trigger: GGTTGATGCCAGCAAGGCCCACACCAAGGCTACTTC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCATCCCCTCCTCCTaGAAGAGGCTCTGTCGGTTG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSIPSS*KRLCRL
Trigger: CAACCGACAGAGCCTCTTCCAGGAGGAGGGGATGCT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTTGATGTGGTTCTCCTaGATGATGTTCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVLMWFS*MMFSTS
Trigger: TGAGGTGCTGAACATCATCCAGGAGAACCACATCAA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGAAACAGCTTCGTGTTaGGTTCCACCTGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEETASC*VPPGRR
Trigger: CCTTCTTCCAGGTGGAACCCAACACGAAGCTGTTTC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGCAACAGCTGTGCCTaGTCCACGTGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGCNSCA*STWLHR
Trigger: CCTGTGCAGCCACGTGGACCAGGCACAGCTGTTGCA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCACGGGGGTGAGAAATaGTGTGGAGGTCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRHGGEK*CGGLRE
Trigger: CTCCCTGAGACCTCCACACCATTTCTCACCCCCGTG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAGCACCGGGACGAACTaGAACTCCACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSTGTN*NSTEPP
Trigger: TGGGGGCTCTGTGGAGTTCCAGTTCGTCCCGGTGCT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACAGCGCACCACTGTGTaGGACACCAGCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGQRTTV*DTSSCK
Trigger: CTTGCAGGAGCTGGTGTCCCACACAGTGGTGCGCTG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACATGTTCCCAATGCTCTaGATCATAAGGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHMFPML*IIRFSS
Trigger: GGAGGAGAACCTTATGATCCAGAGCATTGGGAACAT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCGCTCTCATCAGGTTTaGGTGTTGGTAGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHRSHQV*VLVEDF
Trigger: AAAGTCTTCTACCAACACCCAAACCTGATGAGAGCG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTCAAACATGGAGCGCTaGTTCTGCCGGCTGATTCGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSNMER*FCRLIR
Trigger: CCGAATCAGCCGGCAGAACCAGCGCTCCATGTTTGA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCAGGTGGTCAAACATaGAGCGCTGGTTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSGGQT*SAGSAG
Trigger: GCCGGCAGAACCAGCGCTCCATGTTTGACCACCTGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGGTAAGGAGCTTGAGTaGCATCTTGGCGAACTCATT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRGKELE*HLGELI
Trigger: AATGAGTTCGCCAAGATGCCACTCAAGCTCCTTACC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAGTTGGCCCAGCCTGTaGGGAGGCAGTAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASWPSL*GGSSTS
Trigger: GGAAGTACTACTGCCTCCCCACAGGCTGGGCCAACT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAAGGCCCACTTCTCATaGGTGTACTCTGCGAACTTG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEKAHFS*VYSANL
Trigger: CAAGTTCGCAGAGTACACCCATGAGAAGTGGGCCTT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGGTCTCAGCATGGGGTaGGTCTTCAATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGGLSMG*VFNSSS
Trigger: TGATGAAGAATTGAAGACCCACCCCATGCTGAGACC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGTCTCAGCATGGGGTaGGTCTTCAATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGLSMG*VFNSSS
Trigger: TGATGAAGAATTGAAGACCCACCCCATGCTGAGACC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTGTAGGGTCTCAGCATaGGGTGGGTCTTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRCRVSA*GGSSIL
Trigger: AAGAATTGAAGACCCACCCCATGCTGAGACCCTACA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAACCACAGCCTCCAGGTaGGCGATGAACTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGTTASR*AMNSWE
Trigger: CTCCCAGGAGTTCATCGCCCACCTGGAGGCTGTGGT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCTCCGAACTGGTGCTaGGCGATGTGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSPNWC*AMCWKR
Trigger: CCTCTTCCAGCACATCGCCCAGCACCAGTTCGGAGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACATCGTCTCCGAACTaGTGCTGGGCGATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRTSSPN*CWAMCW
Trigger: CCAGCACATCGCCCAGCACCAGTTCGGAGACGATGT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCTCTGCATTGGGGTTaGGCTCTGTCAGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPLHWG*ALSASV
Trigger: CACACTGGCTGACAGAGCCCAACCCCAATGCAGAGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACCGCCCTCCTCCAGGTaGCAGCTCTTTGCCATGATG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGPPSSR*QLFAMM
Trigger: CATCATGGCAAAGAGCTGCCACCTGGAGGAGGGCGG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGCAGCCTTGACTGCTaGTACAGGAGCCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQCSLDC*YRSLCF
Trigger: GAAACAGAGGCTCCTGTACCAGCAGTCAAGGCTGCA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAGCGCCTGGATACTCTaGAAGAAGCCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQSAWIL*KKPTSF
Trigger: GAAGGAAGTGGGCTTCTTCCAGAGTATCCAGGCGCT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGAATCATCTCCACATTaGACGAAGACTCCACGAGCA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWESSPH*TKTPRA
Trigger: TGCTCGTGGAGTCTTCGTCCAATGTGGAGATGATTC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCCAGTGAACTGCTTCTaGCTGTCCATGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARPVNCF*LSMAFW
Trigger: CCAGAAGGCCATGGACAGCCAGAAGCAGTTCACTGG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATGCTCTTCTAGAGTGTaGGTCTCAAACCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGECSSRV*VSNPCG
Trigger: CCCACATGGGTTTGAGACCCACACTCTAGAAGAGCA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTACGTCTCCTGCCTTaGCCATTTTGCTCTTATTGT +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVVRLLP*PFCSYC
Trigger: ACAATAAGAGCAAAATGGCCAAGGCAGGAGACGTAC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAACTTCAGCTGTTCCTTaGGCACCGTGGCGCTGCACT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGTSAVP*APWRCT
Trigger: AGTGCAGCGCCACGGTGCTCAAGGAACAGCTGAAGT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGCATGGCCTTCTTCTTaGGTACCCCAAGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGAWPSS*VPQASG
Trigger: CCCTGAGGCTTGGGGTACTCAAGAAGAAGGCCATGC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCGGTGGTGTAGACGTTaGGGCGGTCAATGCAATTCA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARRWCRR*GGQCNS
Trigger: TGAATTGCATTGACCGCCTCAACGTCTACACCACCG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCACATCCAGGACCTTGTaGTTCCGCCCATGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARTSRTL*FRPCLS
Trigger: AGACAAGCATGGGCGGAATCACAAGGTCCTGGATGT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGGCACAGGCTCAAACTaGGGAAGACTCTTGCTAAAC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQGTGSN*GRLLLN
Trigger: GTTTAGCAAGAGTCTTCCTCAGTTTGAGCCTGTGCC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTTTCCCATTGGCTGTaGAGGTCATTAAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLSHWL*RSLSRW
Trigger: CCACCGGCTTAATGACCTTCACAGCCAATGGGAAAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCTCTTCTTCCTCCCTaGAGACTTCAGGCTCAATCA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPLLPP*RLQAQS
Trigger: TGATTGAGCCTGAAGTCTTCAGGGAGGAAGAAGAGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGGTTCTGCCGGCTaGTTCGGCAGAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGAGSAG*FGRSSR
Trigger: TCTGCTACTTCTGCCGAATCAGCCGGCAGAACCAGC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTACAGAAGAGGCTGGTaGTCATTTCCTTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRYRRGW*SFPSPC
Trigger: ACAAGGAGAAGGAAATGATCACCAGCCTCTTCTGTA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTCGGCAACATCTTCTTaGGTGTGGCCACGATCAAGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSATSS*VWPRSR
Trigger: CCTTGATCGTGGCCACACTCAAGAAGATGTTGCCGA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTTAGAGCTGTGCGGCTaGAGTGTAGGACCAACTGGT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLELCG*SVGPTG
Trigger: ACCAGTTGGTCCTACACTTCAGCCGCACAGCTCTAA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAGCCTACGATGTCCTTaGGTTTCAGAAACATGTCGA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRSLRCP*VSETCR
Trigger: TCGACATGTTTCTGAAACTCAAGGACATCGTAGGCT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCAAACTCTTCGCAGTTaGTCATCTCATTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHQTLRS*SSHSHL
Trigger: CAGATGAGAATGAGATGATCAACTGCGAAGAGTTTG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCACCACGTCGAAGATaGACTGGCGCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASPRRR*TGAWTP
Trigger: AGGAGTCCAAGCGCCAGTTCATCTTCGACGTGGTGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCACCACGTCGAAGATaGACTGGCGCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSPRRR*TGAWTP
Trigger: AGGAGTCCAAGCGCCAGTTCATCTTCGACGTGGTGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCAGGCTCGGAGATCTaGGCTGCGATCTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASGSEI*AAICIS
Trigger: TGAGATGCAGATCGCAGCTCAGATCTCCGAGCCTGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCAATAATCAGACCCTaGATGATAGCCAGCAGAATG +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSIIRP*MIASRM
Trigger: CATTCTGCTGGCTATCATTCAGGGTCTGATTATTGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGAGCGCACAGTTGGTaGGATTGCCACGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRRAHSW*DCHGSE
Trigger: CTCTGATCCGTGGCAATCGCACCAACTGTGCGCTCT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTACAACACCTCCAGGATaGCAGATGAGGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGATTPPG*QMRPPD
Trigger: GTCTGGAGGCCTCATCTGGCATCCTGGAGGTGTTGT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCTCAAAGTACCATTTaGCATACTGCGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPQSTI*HTAWSP
Trigger: AGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATTCACAAGACATGGGTaGAGCCTCTTGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRFTRHG*SLLLSS
Trigger: GGATGACAACAAGAGGCTGCACCCATGTCTTGTGAA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATTCTGCCTTCTCATCTaGCATGCCCACGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGFCLLI*HAHVAA
Trigger: GGCTGCCACGTGGGCATGGCAGATGAGAAGGCAGAA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAACAGGCATCAGCATCTaGACCTCCAGCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGTGISI*TSSLGG
Trigger: CCCACCAAGGCTGGAGGTGCAGATGCTGATGCCTGT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGACTCCACCCGGTGCTaGAGCTCTTGGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRDSTRC*SSWSQK
Trigger: TTTCTGTGACCAAGAGCTGCAGCACCGGGTGGAGTC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAAGCGACCCCGCTGGTTaGCCTGCATCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSDPAG*PASCPH
Trigger: ATGTGGACAAGATGCAGGGCAACCAGCGGGGTCGCT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCGTCATACTGCCGATaGAGGAGGCTGAACATGGCA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRPSYCR*RRLNMA
Trigger: TGCCATGTTCAGCCTCCTGCATCGGCAGTATGACGG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGTCAGGCACGAAGGATaGAGACATCTTCGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARVRHEG*RHLRLN
Trigger: GTTCAGCCGAAGATGTCTGCATCCTTCGTGCCTGAC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGTTGTGGTAATTTTCTaGCAGTTGTTCGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRVVVIF*QLFGHG
Trigger: GCCATGGCCGAACAACTGGCAGAAAATTACCACAAC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACTTCTCTCGATCCCGTaGCTTCTCCTTGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGLLSIP*LLLGRE
Trigger: CTCACGGCCAAGGAGAAGGCACGGGATCGAGAGAAG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAATCCAGCGAAGCAGCTaGTGCAGGAAGCCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGIQRSS*CRKPKA
Trigger: TGCCTTCGGCTTCCTGCAGCAGCTGCTTCGCTGGAT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCTCTGTCAGCCAGTGTaGCCTGTTGTTGTCTACGTA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQLCQPV*PVVVYV
Trigger: TACGTAGACAACAACAGGGCACACTGGCTGACAGAG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCTGAACAGCTCCTCTaGATTGGGGTTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPEQLL*IGVGLC
Trigger: ACAGAGCCCAACCCCAATGCAGAGGAGCTGTTCAGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCAGGTGGCAGCTCTTTaGCATGATGTCAGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARQVAAL*HDVSVS
Trigger: GCTTACGCTGACATCATGGCAAAGAGCTGCCACCTG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCCTCTGCCTTGTTCTaGCTCTCGAAGGCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPSALF*LSKALR
Trigger: CCTCAATGCCTTCGAGAGGCAGAACAAGGCAGAGGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATCCCAGAGGCGACTGTaGGCCAGACTCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSQRRL*ARLCWF
Trigger: AAACCAGCAGAGTCTGGCGCACAGTCGCCTCTGGGA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCATGTCCACCATCTaGCGCGCGATCATACCGTTC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSMSTI*RAIIPF
Trigger: GAACGGTATGATCGCGCGGCAGATGGTGGACATGCT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACATCTCATTCTCATCTaGTTCGGAACACGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRHLILI*FGTREQ
Trigger: CTGCTCTCGTGTTCCGAAGCAGATGAGAATGAGATG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGCTCCATGTAGCCGGTaGTCTCCTCCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRAPCSR*SPPGSS
Trigger: ACTACTTCCTGGAGGAGAGCACCGGCTACATGGAGC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCTGCCTTGGCCATTTTaGTCTTATTGTCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLPWPF*SYCQLS
Trigger: TGACAGCTGACAATAAGAGCAAAATGGCCAAGGCAG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCCGTCCGCAAAAACTaGACCTCGTCCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASVRKN*TSSSPS
Trigger: TGAAGGCGAGGACGAGGTCCAGTTTTTGCGGACGGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCCGTCCGCAAAAACTaGACCTCGTCCTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSVRKN*TSSSPS
Trigger: TGAAGGCGAGGACGAGGTCCAGTTTTTGCGGACGGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCATTCTGCGCGTTGCTaGTGGGTTCCAGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQHSARC*WVPESK
Trigger: TTTGCTTTCTGGAACCCACCAGCAACGCGCAGAATG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGGCCCCAGCGGAGATaGCTTCCACTCCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGWPQRR*LPLQLI
Trigger: AATCAGCTGGAGTGGAAGCCATCTCCGCTGGGGCCA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGAAGTAGCCTTGGTGTaGGCCTTGCTGGCATCAACC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAEVALV*ALLAST
Trigger: GGTTGATGCCAGCAAGGCCCACACCAAGGCTACTTC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGGGACTCCTCCTGCTaGCATCGCGTCAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGWDSSC*HRVSDN
Trigger: GTTGTCACTGACGCGATGCCAGCAGGAGGAGTCCCA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTTGATGTGGTTCTCCTaGATGATGTTCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRLMWFS*MMFSTS
Trigger: TGAGGTGCTGAACATCATCCAGGAGAACCACATCAA...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAACTTAAATTCACCATaGCGGCCACCAAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRNLNSP*RPPRRK
Trigger: CTTCCTCCTTGGTGGCCGCCATGGTGAATTTAAGTT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCAAGACGATCTGGATaGTGTCCACAGGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARARRSG*CPQDRV
Trigger: TACCCTGTCCTGTGGACACCATCCAGATCGTCTTGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGGTTCTGGCAAGCTGTaGAAATTCACAAGACATGGG +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRGSGKL*KFTRHG
Trigger: CCCATGTCTTGTGAATTTCCACAGCTTGCCAGAACC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAAAGTGCTGGTGGAACTaGACCGGAAGGCTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGKCWWN*TGRLSR
Trigger: CCGGCTAAGCCTTCCGGTCCAGTTCCACCAGCACTT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACAGCGGAAGTGCTGGTaGAACTGGACCGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGQRKCW*NWTGRL
Trigger: AAGCCTTCCGGTCCAGTTCCACCAGCACTTCCGCTG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGTGTTGGGTTCCACCTaGAAGAAGGTGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEVLGST*KKVLLS
Trigger: AGAAAGCAACACCTTCTTCCAGGTGGAACCCAACAC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTTCCCCAGCTCAAACTaGACCACGTTCTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRFPSSN*TTFWWV
Trigger: CACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCAAACATGGAGCGCTaGTTCTGCCGGCTGATTCGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSNMER*FCRLIR
Trigger: CCGAATCAGCCGGCAGAACCAGCGCTCCATGTTTGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAAGTTGGCCCAGCCTGTaGGGAGGCAGTAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSWPSL*GGSSTS
Trigger: GGAAGTACTACTGCCTCCCCACAGGCTGGGCCAACT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTTGGTGAAGTATTaGTTGATCAAAGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRWLVKY*LIKGSR
Trigger: TCTGCTGCCTTTGATCAACCAATACTTCACCAACCA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATACCCAGCTTCAGGGTaGAAGACACCATGGCACCCG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGYPASG*KTPWHP
Trigger: CGGGTGCCATGGTGTCTTCCACCCTGAAGCTGGGTA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGTTTGCATCAGCGCCTaGATACTCTGGAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARVCISA*ILWKKP
Trigger: GGGCTTCTTCCAGAGTATCCAGGCGCTGATGCAAAC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGAATCATCTCCACATTaGACGAAGACTCCACGAGCA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEESSPH*TKTPRA
Trigger: TGCTCGTGGAGTCTTCGTCCAATGTGGAGATGATTC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGAATCATCTCCACATTaGACGAAGACTCCACGAGCA +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRESSPH*TKTPRA
Trigger: TGCTCGTGGAGTCTTCGTCCAATGTGGAGATGATTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCACTGTCACCTTCTTaGCGCTGTCTACCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASLSPS*RCLPAH
Trigger: GTGGGCTGGTAGACAGCGCCAAGAAGGTGACAGTGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCTTCTTTGGAGGGGGTaGAGGTGGTGTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRLLWRG*RWCLLG
Trigger: CCCAAGAAGACACCACCTCCACCCCCTCCAAAGAAG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCAAACTTCCAGATCTaGTATTTGACATCGATAGAC +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPNFQI*YLTSID
Trigger: GTCTATCGATGTCAAATACCAGATCTGGAAGTTTGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCATCCATATGTCCATaGAAGAGGCGCAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASSICP*KRRRTW
Trigger: CCACGTCCTGCGCCTCTTTCATGGACATATGGATGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTGTGGTTCTCCTGGATaGTGTTCAGCACCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRCGSPG*CSAPQD
Trigger: GTCCTGAGGTGCTGAACATCATCCAGGAGAACCACA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAGCAGTTGCTACACTTaGGGCTGCTGTGGACATTGC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASSCYT*GCCGHC
Trigger: GCAATGTCCACAGCAGCCTCAAGTGTAGCAACTGCT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACAGGAACATGGCGGCTaGCAGCGGCATGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGQEHGG*QRHDVL
Trigger: AAGAACATCATGCCGCTGTCAGCCGCCATGTTCCTG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCCAGCAGGTCTTGGTaGAAGTTGACTAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARASRSW*KLTNSC
Trigger: ACAGGAGTTAGTCAACTTTCACCAAGACCTGCTGGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATATGTGAAGACAGTTaGCCACAGCTGGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRICEDS*PQLGHP
Trigger: CGGATGCCCCAGCTGTGGTCAACTGTCTTCACATAT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGTACGTCATCCAGGATaGCATCGTCTCCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRVRHPG*HRLRTG
Trigger: ACCAGTTCGGAGACGATGTCATCCTGGATGACGTAC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACAAAAGGACATGTTGTTaGTTTCATTCTGGACCACGA +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHKRTCC*FHSGPR
Trigger: TCGTGGTCCAGAATGAAATCAACAACATGTCCTTTT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTACTGCGGACACTTCCTaGACTCTGCGCACGATTTTC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGATADTS*TLRTIF
Trigger: GAAAATCGTGCGCAGAGTTCAGGAAGTGTCCGCAGT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTACCAGTAGAAGTCACTaGTGGATTCCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGATSRSH*WIPAAA
Trigger: TGCGGCTGCAGGAATCCATCAGTGACTTCTACTGGT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCCTACGATGTCCTTaGGTTTCAGAAACATGTCGA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESLRCP*VSETCR
Trigger: TCGACATGTTTCTGAAACTCAAGGACATCGTAGGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATCACCACGTCGAAGATaGACTGGCGCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSPRRR*TGAWTP
Trigger: AGGAGTCCAAGCGCCAGTTCATCTTCGACGTGGTGA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGATTCAAAGACACCCTaGACGGGGCAGCCGTTGATA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGADSKTP*TGQPLI
Trigger: TATCAACGGCTGCCCCGTGCAGGGTGTCTTTGAATC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTTCATGAATGTTCTCTaGCAGCTTCTCCCGAATCCG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQFMNVL*QLLPNP
Trigger: CGGATTCGGGAGAAGCTGGCAGAGAACATTCATGAA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCATCTTCAGGATCTaGTTCACATCCTCGTCACTA +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWIIFRI*FTSSSL
Trigger: TAGTGACGAGGATGTGAAGCAGATCCTGAAGATGAT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGATCATCTTCAGGATCTaGTTCACATCCTCGTCACTA +
Preference number: 4 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRIIFRI*FTSSSL
Trigger: TAGTGACGAGGATGTGAAGCAGATCCTGAAGATGAT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCTTCCTTCTCGTGTaGCTCTTCTTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRIFLLV*LFFFIL
Trigger: GAGGATGAAGAAGAAGAGGCACACGAGAAGGAAGAT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAATAGCATGTTGATCTaGTCCTGGGGTGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARNSMLI*SWGGER
Trigger: CCGTTCTCCACCCCAGGAGCAGATCAACATGCTATT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCACCATTTTTGAAGTaGAATAGCATGTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: ICPQLPGEELAVEKALEVAPFLK*NSMLIC
Trigger: GCAGATCAACATGCTATTGCACTTCAAAAATGGTGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACCACCTTGGCCATTTTaGTCTTATTGTCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEPPWPF*SYCQLS
Trigger: TGACAGCTGACAATAAGAGCAAAATGGCCAAGGTGG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032813.10
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGACACTTCCTGAACTCTaGGCACGATTTTCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQTLPEL*ARFSRD
Trigger: ATCCCGAGAAAATCGTGCGCAGAGTTCAGGAAGTGT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTCCTCCTCTTCTTCCTaGTCTCCAGCTTTCGATAGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSSSSS*SPAFDR
Trigger: CCTATCGAAAGCTGGAGAGCAGGAAGAAGAGGAGGA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTGGAAATCATTGTTGTaGCCCTCGCAGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAWKSLL*PSQSSC
Trigger: GCAGCTGCTCTGCGAGGGGCACAACAATGATTTCCA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCTTCATCATCATGTaGGCGAACACGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSFIIM*ANTCRK
Trigger: CTTCCTGCACGTGTTCGCGCACATGATGATGAAGCT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGAATTCTTCCAGGCCTaGTCCTCCAGCTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAEFFQA*SSSFLL
Trigger: AAGGAGGAAGCTGGAGGAGCAGGCCTGGAAGAATTC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGAATTCTTCCAGGCCTaGTCCTCCAGCTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGREFFQA*SSSFLL
Trigger: AAGGAGGAAGCTGGAGGAGCAGGCCTGGAAGAATTC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCAGAAGGGGAGATaGTCAAACATTCATCCATAT +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRCQKGR*SNIHPY
Trigger: ATATGGATGAATGTTTGACCATCTCCCCTTCTGACA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGAAGTAGCCTTGGTGTaGGCCTTGCTGGCATCAACC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGEVALV*ALLAST
Trigger: GGTTGATGCCAGCAAGGCCCACACCAAGGCTACTTC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAGAAGAGCGCACAGTTaGTGCGATTGCCACGGATCA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGARRAHS*CDCHGS
Trigger: TGATCCGTGGCAATCGCACCAACTGTGCGCTCTTCT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTGAGCTGTCAGAAATaGAGCCACCTCATCCACCAT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLSCQK*SHLIHH
Trigger: ATGGTGGATGAGGTGGCTCCATTTCTGACAGCTCAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGGCTCAAAGCCTTCCTaGAGGCCACAGATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAGSKPS*RPQMAK
Trigger: TTTTGCCATCTGTGGCCTCCAGGAAGGCTTTGAGCC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATCCACCTGTAGGAAGTaGTTGGGCATTCGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSTCRK*LGIRLH
Trigger: GTGGAGCCGAATGCCCAACCACTTCCTACAGGTGGA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCATAAGGTTCTCCTCCTaGGGACCCATCTGCACAATG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARIRFSS*GPICTM
Trigger: CATTGTGCAGATGGGTCCCCAGGAGGAGAACCTTAT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATCAAACATGGAGCGCTaGTTCTGCCGGCTGATTCGG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSNMER*FCRLIR
Trigger: CCGAATCAGCCGGCAGAACCAGCGCTCCATGTTTGA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACCTCAGAGATTCGGATaGCCTCTTCGATGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGPQRFG*PLRWQP
Trigger: TGGCTGCCATCGAAGAGGCCATCCGAATCTCTGAGG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGGTAAGGAGCTTGAGTaGCATCTTGGCGAACTCATT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQGKELE*HLGELI
Trigger: AATGAGTTCGCCAAGATGCCACTCAAGCTCCTTACC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTTTCCTTCTCCTTGTTaGAGGCATGGCCACCACTGC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRFPSPC*RHGHHC
Trigger: GCAGTGGTGGCCATGCCTCCAACAAGGAGAAGGAAA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTTGTTGATTTCATTCTaGACCACGAAGTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWLLISF*TTKFCS
Trigger: AGAACAGAACTTCGTGGTCCAGAATGAAATCAACAA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACCCTCCGGCGCTGCTTaGACAGAAGTTTATGCCACA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGPSGAA*TEVYAT
Trigger: TGTGGCATAAACTTCTGTCCAAGCAGCGCCGGAGGG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCAGGAACTGGATCTCTaGGCCAGTGAACTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRQELDL*ASELLL
Trigger: CAGAAGCAGTTCACTGGCCCAGAGATCCAGTTCCTG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACGTCGAAGATGAACTaGCGCTTGGACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRTSKMN*RLDSFT
Trigger: GGTGAAGGAGTCCAAGCGCCAGTTCATCTTCGACGT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACTTCTTTGGAGGGGGTaGAGGTGGTGTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGLLWRG*RWCLLG
Trigger: CCCAAGAAGACACCACCTCCACCCCCTCCAAAGAAG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGACGATCCAGCTTGCTaGCCAGCCAATCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGDDPAC*PANPSL
Trigger: CAAACTTGGATTGGCTGGTCAGCAAGCTGGATCGTC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAATTGCACACACAGAGTaGGCACAGCACATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGIAHTE*AQHIQD
Trigger: GTCCTGGATGTGCTGTGCTCACTCTGTGTGTGCAAT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAATTGCACACACAGAGTaGGCACAGCACATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGIAHTE*AQHIQD
Trigger: GTCCTGGATGTGCTGTGCTCACTCTGTGTGTGCAAT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCTCGATGCCCATTaGAGACATAGGCCAAATCGT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGGLDAH*RHRPNR
Trigger: ACGATTTGGCCTATGTCTTCAATGGGCATCGAGGCC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAGCAGTTGCTACACTTaGGGCTGCTGTGGACATTGC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSSCYT*GCCGHC
Trigger: GCAATGTCCACAGCAGCCTCAAGTGTAGCAACTGCT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACCACGCTCTCACCGTTaGCAAAGACAGCAAAACGCA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGPRSHR*QRQQNA
Trigger: TGCGTTTTGCTGTCTTTGTCAACGGTGAGAGCGTGG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTACAGAAGAGGCTGGTaGTCATTTCCTTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQYRRGW*SFPSPC
Trigger: ACAAGGAGAAGGAAATGATCACCAGCCTCTTCTGTA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATCGGCAACATCTTCTTaGGTGTGGCCACGATCAAGG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSATSS*VWPRSR
Trigger: CCTTGATCGTGGCCACACTCAAGAAGATGTTGCCGA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGGCACGGTTGGTCTCTaGGATCTCAAAATAGATCCG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAGTVGL*DLKIDP
Trigger: CGGATCTATTTTGAGATCTCAGAGACCAACCGTGCC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCAATAATCAGACCCTaGATGATAGCCAGCAGAATG +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESIIRP*MIASRM
Trigger: CATTCTGCTGGCTATCATTCAGGGTCTGATTATTGA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTGCCTATTCCACAGATaGAGCACTTGGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARCLFHR*STWSPC
Trigger: ACATGGAGACCAAGTGCTTCATCTGTGGAATAGGCA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATCTCCTTCAGACCTCTaGTTTGAGGCTGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSPSDL*FEAGCI
Trigger: GATGCACCCAGCCTCAAAGCAGAGGTCTGAAGGAGA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGATCTTCCTTCTCGTGTaGCTCTTCTTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQIFLLV*LFFFIL
Trigger: GAGGATGAAGAAGAAGAGGCACACGAGAAGGAAGAT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGTCCACATAACACTCTaGAAAGGCCGCCAAGGACTC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGVHITL*KGRQGL
Trigger: GAGTCCTTGGCGGCCTTTGCAGAGTGTTATGTGGAC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTGGATTCCACAATGTaGCAGCAGGTCTTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLDSTM*QQVLVK
Trigger: TTTCACCAAGACCTGCTGGCACATTGTGGAATCCAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTCCATGACTGTTTCATaGATACCCAGCGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSMTVS*IPSALI
Trigger: GATGAGAGCGCTGGGTATGCATGAAACAGTCATGGA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTGGTCGTATTTCTTATaGGCCAGAGAATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWWSYFL*ARESKM
Trigger: CATCTTTGATTCTCTGGCGCATAAGAAATACGACCA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACAGGTGGCAGCTCTTTaGCATGATGTCAGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGQVAAL*HDVSVS
Trigger: GCTTACGCTGACATCATGGCAAAGAGCTGCCACCTG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCAGGCACTGATCATCTaGAGTACCATCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRQALII*STISAA
Trigger: TGCTGCTGAGATGGTACTGCAGATGATCAGTGCCTG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTCGGAGATCTGAGCTaGGATCTGCATCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLGDLS*DLHLKD
Trigger: ATCTTTGAGATGCAGATCGCAGCTCAGATCTCCGAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATGTCAGAAGGGGAGATaGTCAAACATTCATCCATAT +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGCQKGR*SNIHPY
Trigger: ATATGGATGAATGTTTGACCATCTCCCCTTCTGACA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGCCAATCCAAGTTTGTaGAGAAGAGCGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAANPSL*RRAHSW
Trigger: CCAACTGTGCGCTCTTCTCCACAAACTTGGATTGGC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAATGATAGACTTGATGTaGTTCTCCTGGATGATGTTC +
Preference number: 4 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGMIDLM*FSWMMF
Trigger: GAACATCATCCAGGAGAACCACATCAAGTCTATCAT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAACTTAAATTCACCATaGCGGCCACCAAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARNLNSP*RPPRRK
Trigger: CTTCCTCCTTGGTGGCCGCCATGGTGAATTTAAGTT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATACTCTTTGATGGGTTaGAGATGGAGCCGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGYSLMG*RWSRSR
Trigger: TCGGGAGCGGCTCCATCTCCAACCCATCAAAGAGTA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGGTTCTGGCAAGCTGTaGAAATTCACAAGACATGGG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARGSGKL*KFTRHG
Trigger: CCCATGTCTTGTGAATTTCCACAGCTTGCCAGAACC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAAACCAGGTGGTAACTaGGCGTTGCATGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAKPGGN*ALHVDG
Trigger: GCCATCAACATGCAACGCCCAGTTACCACCTGGTTT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAATGACAAGGTCTGTGTaGCTGATTCGGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGMTRSV*LIRPCC
Trigger: ACAGCAGGGCCGAATCAGCCACACAGACCTTGTCAT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTATAAGGTTCTCCTCCTaGGGACCCATCTGCACAATG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAIRFSS*GPICTM
Trigger: CATTGTGCAGATGGGTCCCCAGGAGGAGAACCTTAT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAGCTTGTCACCATCTTaGGGAAGCGGATCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASLSPS*GSGSPL
Trigger: CAAAGGAGATCCGCTTCCCCAAGATGGTGACAAGCT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTGTAGGGTCTCAGCATaGGGTGGGTCTTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARCRVSA*GGSSIL
Trigger: AAGAATTGAAGACCCACCCCATGCTGAGACCCTACA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTATGTCTGGGCGGTTTaGGATATCTTTCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHYVWAV*DIFLVF
Trigger: AAAAACAAGAAAGATATCCCAAACCGCCCAGACATA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAATCTCCTGTTCATGTaGGGATTTCTCCACCCGTCC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGANLLFM*GFLHPS
Trigger: GGACGGGTGGAGAAATCCCCACATGAACAGGAGATT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACACTGCCCAGCACTTTaGCTGGTGTGGATAGGAAGT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGHCPAL*LVWIGS
Trigger: ACTTCCTATCCACACCAGCCAAAGTGCTGGGCAGTG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATTTCCTTCTCCTTGTTaGAGGCATGGCCACCACTGC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGFPSPC*RHGHHC
Trigger: GCAGTGGTGGCCATGCCTCCAACAAGGAGAAGGAAA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCTGACTGGACCACCTTaGCCATTTTGCTCTTATTGT +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQLTGPP*PFCSYC
Trigger: ACAATAAGAGCAAAATGGCCAAGGTGGTCCAGTCAG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032813.10
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATGCAGCCTTGACTGCTaGTACAGGAGCCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGCSLDC*YRSLCF
Trigger: GAAACAGAGGCTCCTGTACCAGCAGTCAAGGCTGCA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCTGGCTGTCCATaGCCTTCTGGAAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGASGCP*PSGSPS
Trigger: AGAAGGACTTCCAGAAGGCCATGGACAGCCAGAAGC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGGAAAAACATGTAATTaGCTAGGTTGTGCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRGKTCN*LGCALL
Trigger: TAGAAGAGCACAACCTAGCCAATTACATGTTTTTCC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCATCTCTCCTGTGGTaGCTGCTTCAAACTCGAAGT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGASLLW*LLQTRS
Trigger: ACTTCGAGTTTGAAGCAGTCACCACAGGAGAGATGC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACCTCTTCTTCCTCCCTaGAGACTTCAGGCTCAATCA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGPLLPP*RLQAQS
Trigger: TGATTGAGCCTGAAGTCTTCAGGGAGGAAGAAGAGG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGAGCGTGCCAATATGTaGAGACAGTTGACCACAGCT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGERANM*RQLTTA
Trigger: AGCTGTGGTCAACTGTCTTCACATATTGGCACGCTC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCAAACTCTTCGCAGTTaGTCATCTCATTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQQTLRS*SSHSHL
Trigger: CAGATGAGAATGAGATGATCAACTGCGAAGAGTTTG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAATTGTGAGTGACAGATaGAAGGATGGTGCGGAGCGT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGIVSDR*KDGAER
Trigger: ACGCTCCGCACCATCCTTTCATCTGTCACTCACAAT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACGAAGAAGAAAAAGGTaGTGTCGAAGACGACCCGGT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGRRRKR*CRRRPG
Trigger: ACCGGGTCGTCTTCGACATCACCTTTTTCTTCTTCG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATTGATGAGGTTTGTCTaGAGCAGAAGTTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGLMRFV*SRSSRP
Trigger: GGGCCGAGAACTTCTGCTGCAGACAAACCTCATCAA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTTCATGAATGTTCTCTaGCAGCTTCTCCCGAATCCG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRFMNVL*QLLPNP
Trigger: CGGATTCGGGAGAAGCTGGCAGAGAACATTCATGAA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGAAAAGCACCATGGATaGCTTGTGGTCAGGCACGAA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGEKHHG*LVVRHE
Trigger: TTCGTGCCTGACCACAAGGCATCCATGGTGCTTTTC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAGTCCTGGTTCTCAATaGCATACACTCGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSPGSQ*HTLGPG
Trigger: TCCTGGACCGAGTGTATGGCATTGAGAACCAGGACT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACCAGAGAGTAGATACTaGAGAGCGTTCGGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGPESRY*RAFGSK
Trigger: CTTGCTACCGAACGCTCTGCAGTATCTACTCTCTGG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATCCTCCTCTTCTTCCTaGTCTCCAGCTTTCGATAGG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSSSSS*SPAFDR
Trigger: CCTATCGAAAGCTGGAGAGCAGGAAGAAGAGGAGGA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAGCTTCATCATCATGTaGGCGAACACGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSFIIM*ANTCRK
Trigger: CTTCCTGCACGTGTTCGCGCACATGATGATGAAGCT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACATTCTGCGCGTTGCTaGTGGGTTCCAGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGHSARC*WVPESK
Trigger: TTTGCTTTCTGGAACCCACCAGCAACGCGCAGAATG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACATTCTGCGCGTTGCTaGTGGGTTCCAGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGHSARC*WVPESK
Trigger: TTTGCTTTCTGGAACCCACCAGCAACGCGCAGAATG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACACAGCCAGAGCAGATaGGATTCATGTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGHSQSR*DSCSTE
Trigger: CTCTGTGGAACATGAATCCCATCTGCTCTGGCTGTG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACACAGCCAGAGCAGATaGGATTCATGTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGHSQSR*DSCSTE
Trigger: CTCTGTGGAACATGAATCCCATCTGCTCTGGCTGTG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGCCAATCCAAGTTTGTaGAGAAGAGCGCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGANPSL*RRAHSW
Trigger: CCAACTGTGCGCTCTTCTCCACAAACTTGGATTGGC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACTGAGCTGTCAGAAATaGAGCCACCTCATCCACCAT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGLSCQK*SHLIHH
Trigger: ATGGTGGATGAGGTGGCTCCATTTCTGACAGCTCAG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGAAACAGCTTCGTGTTaGGTTCCACCTGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGETASC*VPPGRR
Trigger: CCTTCTTCCAGGTGGAACCCAACACGAAGCTGTTTC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAATAAGGTTCTCCTCCTaGGGACCCATCTGCACAATG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGIRFSS*GPICTM
Trigger: CATTGTGCAGATGGGTCCCCAGGAGGAGAACCTTAT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAAGGCCCACTTCTCATaGGTGTACTCTGCGAACTTG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGKAHFS*VYSANL
Trigger: CAAGTTCGCAGAGTACACCCATGAGAAGTGGGCCTT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACATAGGGGTTCCTGGTaGTTCCCAGAGAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGHRGSW*FPESRY
Trigger: GTATCTACTCTCTGGGAACCACCAGGAACCCCTATG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTTGTTGATTTCATTCTaGACCACGAAGTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLLISF*TTKFCS
Trigger: AGAACAGAACTTCGTGGTCCAGAATGAAATCAACAA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCTACCGACATGGCTTTaGAGAAGTTTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLPTWL*RSFSFP
Trigger: AGGGAAAGAGAAACTTCTCCAAAGCCATGTCGGTAG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTTCACTTGCTCTTGTTaGTCTCGGAGCTCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRFTCSC*SRSSPK
Trigger: TTTTGGGGAGCTCCGAGACCAACAAGAGCAAGTGAA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCAAACATGTTCATCATaGGTACTTGGCACGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAQTCSS*VLGTGV
Trigger: GACTCCCGTGCCAAGTACCCATGATGAACATGTTTG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACTCTTTGTCCTTCTCTaGGAAGGTCTTGTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGLFVLL*EGLVGS
Trigger: AGACCCTACAAGACCTTCTCAGAGAAGGACAAAGAG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACTCTTTGTCCTTCTCTaGGAAGGTCTTGTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGLFVLL*EGLVGS
Trigger: AGACCCTACAAGACCTTCTCAGAGAAGGACAAAGAG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAGCTGCTTTCCATTGTaGGTGACAGATGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASCFPL*VTDERM
Trigger: CATCCTTTCATCTGTCACTCACAATGGAAAGCAGCT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATTCACAAGACATGGGTaGAGCCTCTTGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGFTRHG*SLLLSS
Trigger: GGATGACAACAAGAGGCTGCACCCATGTCTTGTGAA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATCCATGACTGTTTCATaGATACCCAGCGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSMTVS*IPSALI
Trigger: GATGAGAGCGCTGGGTATGCATGAAACAGTCATGGA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAATGTCTTCCTTCACTTaGTCTTGTTGGTCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGMSSFT*SCWSRS
Trigger: GCTCCGAGACCAACAAGAGCAAGTGAAGGAAGACAT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAAACTTAAATTCACCATaGCGGCCACCAAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGNLNSP*RPPRRK
Trigger: CTTCCTCCTTGGTGGCCGCCATGGTGAATTTAAGTT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAATTCCGCTCAGGTTCTaGCAAGCTGTGGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGIPLRF*QAVEIH
Trigger: GTGAATTTCCACAGCTTGCCAGAACCTGAGCGGAAT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAATTCCGCTCAGGTTCTaGCAAGCTGTGGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGIPLRF*QAVEIH
Trigger: GTGAATTTCCACAGCTTGCCAGAACCTGAGCGGAAT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGTGTTGGGTTCCACCTaGAAGAAGGTGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGVLGST*KKVLLS
Trigger: AGAAAGCAACACCTTCTTCCAGGTGGAACCCAACAC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGTGTTGGGTTCCACCTaGAAGAAGGTGTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGVLGST*KKVLLS
Trigger: AGAAAGCAACACCTTCTTCCAGGTGGAACCCAACAC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAAATACTCCAGGAGGTaGCACATCTGTAATTTCACA +
Preference number: 4 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQKYSRR*HICNFT
Trigger: TGTGAAATTACAGATGTGCCACCTCCTGGAGTATTT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGTTCCCAATGCTCTaGATCATAAGGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRMFPML*IIRFSS
Trigger: GGAGGAGAACCTTATGATCCAGAGCATTGGGAACAT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCTCAGCATGGGGTaGGTCTTCAATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGGLSMG*VFNSSS
Trigger: TGATGAAGAATTGAAGACCCACCCCATGCTGAGACC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATATGTCTGGGCGGTTTaGGATATCTTTCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEYVWAV*DIFLVF
Trigger: AAAAACAAGAAAGATATCCCAAACCGCCCAGACATA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATTGTTGATTTCATTCTaGACCACGAAGTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRLLISF*TTKFCS
Trigger: AGAACAGAACTTCGTGGTCCAGAATGAAATCAACAA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCTACCGACATGGCTTTaGAGAAGTTTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRLPTWL*RSFSFP
Trigger: AGGGAAAGAGAAACTTCTCCAAAGCCATGTCGGTAG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATTCACTTGCTCTTGTTaGTCTCGGAGCTCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGFTCSC*SRSSPK
Trigger: TTTTGGGGAGCTCCGAGACCAACAAGAGCAAGTGAA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGACTTTGTTATTCATaGTGTTCCCAATGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARRLCYS*CSQCSG
Trigger: TCCAGAGCATTGGGAACATCATGAATAACAAAGTCT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGTCAATAATCAGACCCTaGATGATAGCCAGCAGAATG +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRSIIRP*MIASRM
Trigger: CATTCTGCTGGCTATCATTCAGGGTCTGATTATTGA...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTATCATCTTCAGGATCTaGTTCACATCCTCGTCACTA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAIIFRI*FTSSSL
Trigger: TAGTGACGAGGATGTGAAGCAGATCCTGAAGATGAT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCACCATTTTTGAAGTaGAATAGCATGTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARAPFLK*NSMLIC
Trigger: GCAGATCAACATGCTATTGCACTTCAAAAATGGTGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTGGTCGTATTTCTTATaGGCCAGAGAATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARWSYFL*ARESKM
Trigger: CATCTTTGATTCTCTGGCGCATAAGAAATACGACCA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCTCATGGGTGTACTCTaGGAACTTGTTAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRLMGVL*ELVNEG
Trigger: TCCTTCATTAACAAGTTCGCAGAGTACACCCATGAG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACTGCCTTGGCCATTTTaGTCTTATTGTCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGLPWPF*SYCQLS
Trigger: TGACAGCTGACAATAAGAGCAAAATGGCCAAGGCAG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATTGATGTGGTTCTCCTaGATGATGTTCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGLMWFS*MMFSTS
Trigger: TGAGGTGCTGAACATCATCCAGGAGAACCACATCAA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTGGTTGGTGAAGTATTaGTTGATCAAAGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAWLVKY*LIKGSR
Trigger: TCTGCTGCCTTTGATCAACCAATACTTCACCAACCA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR TCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACAAACTCTTCGCAGTTaGTCATCTCATTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGQTLRS*SSHSHL
Trigger: CAGATGAGAATGAGATGATCAACTGCGAAGAGTTTG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTGTCAGAAGGGGAGATaGTCAAACATTCATCCATAT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGACQKGR*SNIHPY
Trigger: ATATGGATGAATGTTTGACCATCTCCCCTTCTGACA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGATAGACTTGATGTaGTTCTCCTGGATGATGTTC +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRMIDLM*FSWMMF
Trigger: GAACATCATCCAGGAGAACCACATCAAGTCTATCAT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAATACTCCAGGAGGTaGCACATCTGTAATTTCACA +
Preference number: 4 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRKYSRR*HICNFT
Trigger: TGTGAAATTACAGATGTGCCACCTCCTGGAGTATTT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGGAAAAACATGTAATTaGCTAGGTTGTGCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARGKTCN*LGCALL
Trigger: TAGAAGAGCACAACCTAGCCAATTACATGTTTTTCC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGCACCATTTTTGAAGTaGAATAGCATGTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGAPFLK*NSMLIC
Trigger: GCAGATCAACATGCTATTGCACTTCAAAAATGGTGC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR GCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGGTCGTATTTCTTATaGGCCAGAGAATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGWSYFL*ARESKM
Trigger: CATCTTTGATTCTCTGGCGCATAAGAAATACGACCA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAATGATAGACTTGATGTaGTTCTCCTGGATGATGTTC +
Preference number: 4 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGMIDLM*FSWMMF
Trigger: GAACATCATCCAGGAGAACCACATCAAGTCTATCAT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTATGTCTGGGCGGTTTaGGATATCTTTCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAYVWAV*DIFLVF
Trigger: AAAAACAAGAAAGATATCCCAAACCGCCCAGACATA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CCA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGGAAAAACATGTAATTaGCTAGGTTGTGCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAGKTCN*LGCALL
Trigger: TAGAAGAGCACAACCTAGCCAATTACATGTTTTTCC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TCGGCCCGCAGTCGCTGCCAGCCACACCCACACGCCCGCAGCCGCTaGAGAGCCCGACCCGTCGGAACCCGCCGCGCCCTCCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: SARSRCQPHPHARSR*RARPVGTRRALLSL
Trigger: GAGGCTGAGGAGGGCGCGGCGGGTTCCGACGGGTCGGGCTCTGCAGCGGCTGCGGGCGTGTGGGTGTGGCTGGCAGCGACTGCGGGCCGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CCCTCGCCCTCTGCATCGCTGCCAGCGCCGCTCGGCTGCTGGCCGTaGACCTCGTCGCCGGTGGGGTCCGGCATGCCTGCCAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSPSASLPAPLGCWP*TSSPVGSGMPARSS
Trigger: GGAGCTCCTGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CCCTCACCCTCGCCCTCTGCATCGCTGCCAGCGCCGCTCGGCTGCTaGCCGTGCACCTCGTCGCCGGTGGGGTCCGGCATGCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PSPSPSASLPAPLGC*PCTSSPVGSGMPAR
Trigger: CCTGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCGAGGGTGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TCTCCCTCACCCTCGCCCTCTGCATCGCTGCCAGCGCCGCTCGGCTaGTGGCCGTGCACCTCGTCGCCGGTGGGGTCCGGCATGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SPSPSPSASLPAPLG*WPCTSSPVGSGMPA
Trigger: GGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCGAGGGTGAGGGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CACGGCCACCGCCCCGTCGGCACCTCCCGTGCCAGCCTGGTCCGCTaGAGCCTCTTCATCTCCGGCGCCGTCGGCAGCATCGCCTTCGCC +
Preference number: 5 (lower is better)
Translates to: HGHRPVGTSRASLVR*SLFISGAVGSIAFA
Trigger: GGCGAAGGCGATGCTGCCGACGGCGCCGGAGATGAAGAGGCTGCAGCGGACCAGGCTGGCACGGGAGGTGCCGACGGGGCGGTGGCCGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp AGGGACTCCCATCTGCCACGGCCACCGCCCCGTCGGCACCTCCCGTaGCAGCCTGGTCCGCTGCAGCCTCTTCATCTCCGGCGCCGTCGG +
Preference number: 5 (lower is better)
Translates to: RDSHLPRPPPRRHLP*QPGPLQPLHLRRRR
Trigger: CCGACGGCGCCGGAGATGAAGAGGCTGCAGCGGACCAGGCTGGCACGGGAGGTGCCGACGGGGCGGTGGCCGTGGCAGATGGGAGTCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CCATCTGCCACGGCCACCGCCCCGTCGGCACCTCCCGTGCCAGCCTaGTCCGCTGCAGCCTCTTCATCTCCGGCGCCGTCGGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: PSATATAPSAPPVPA*SAAASSSPAPSAAS
Trigger: CGATGCTGCCGACGGCGCCGGAGATGAAGAGGCTGCAGCGGACCAGGCTGGCACGGGAGGTGCCGACGGGGCGGTGGCCGTGGCAGATGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GCCGTCGGCAGCATCGCCTTCGCCTTCTCCCTCACCCTCGCCCTCTaGATCGCTGCCAGCGCCGCTCGGCTGCTGGCCGTGCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: AVGSIAFAFSLTLAL*IAASAARLLAVHLV
Trigger: GACGAGGTGCACGGCCAGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCGAGGGTGAGGGAGAAGGCGAAGGCGATGCTGCCGACGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CGCTGCCAGCGCCGCTCGGCTGCTGGCCGTGCACCTCGTCGCCGGTaGGGTCCGGCATGCCTGCCAGGAGCTCCGTCACTGTCACCTTCT +
Preference number: 5 (lower is better)
Translates to: RCQRRSAAGRAPRRR*GPACLPGAPSLSPS
Trigger: AGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCGGCGCTGGCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CACTGGCGTCGTGTCACCCATATCCCCGAGACCACCGGCGCCTTCTaGCCGGAAGGGACTCCCATCTGCCACGGCCACCGCCCCGTCGGC +
Preference number: 5 (lower is better)
Translates to: HWRRVTHIPETTGAF*PEGTPICHGHRPVG
Trigger: GCCGACGGGGCGGTGGCCGTGGCAGATGGGAGTCCCTTCCGGCCAGAAGGCGCCGGTGGTCTCGGGGATATGGGTGACACGACGCCAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CGGCTGCTGGCCGTGCACCTCGTCGCCGGTGGGGTCCGGCATGCCTaGCAGGAGCTCCGTCACTGTCACCTTCTTGGCGCTGTCTACCAG +
Preference number: 5 (lower is better)
Translates to: RLLAVHLVAGGVRHA*QELRHCHLLGAVYQ
Trigger: CTGGTAGACAGCGCCAAGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CGCTCGGCTGCTGGCCGTGCACCTCGTCGCCGGTGGGGTCCGGCATaGCTGCCAGGAGCTCCGTCACTGTCACCTTCTTGGCGCTGTCTA +
Preference number: 5 (lower is better)
Translates to: RSAAGRAPRRRWGPA*LPGAPSLSPSWRCL
Trigger: TAGACAGCGCCAAGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp AGGCAGGCCATGGCGGCGGGGGCCATCTTCCGCACTTCGCCCAGGTaGGAAAAGCGTGATGGCGCGGGTCTCCGGCGTGAGTGGCACGAT +
Preference number: 5 (lower is better)
Translates to: RQAMAAGAIFRTSPR*EKRDGAGLRREWHD
Trigger: ATCGTGCCACTCACGCCGGAGACCCGCGCCATCACGCTTTTCCCACCTGGGCGAAGTGCGGAAGATGGCCCCCGCCGCCATGGCCTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp GGCCCCGCGACAGCCGGTACACTGTGTGTAGCATGGAGTCCACCATaGTGGCGCGGTGCTCGGTGCCCGCAAAGAGTGGCGCGCACTTGG +
Preference number: 5 (lower is better)
Translates to: GPATAGTLCVAWSPP*WRGARCPQRVARTW
Trigger: CCAAGTGCGCGCCACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGTGGACTCCATGCTACACACAGTGTACCGGCTGTCGCGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp TCGCCCAGGTGGGAAAAGCGTGATGGCGCGGGTCTCCGGCGTGAGTaGCACGATGTACTCAGAGAGCATGGAGCGACGGCTGCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SPRWEKRDGAGLRRE*HDVLREHGATAAAG
Trigger: GCCTGCCGCAGCCGTCGCTCCATGCTCTCTGAGTACATCGTGCCACTCACGCCGGAGACCCGCGCCATCACGCTTTTCCCACCTGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp GCCCATCCCGTGCGGGATCCTCAGAGATTCGGATGGCCTCTTCGATaGCAGCCAGCAGCCCTGAGCCACCCTCACCCCTCAGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: AHPVRDPQRFGWPLR*QPAALSHPHPSGQV
Trigger: GACCTGCCCTGAGGGGTGAGGGTGGCTCAGGGCTGCTGGCTGCCATCGAAGAGGCCATCCGAATCTCTGAGGATCCCGCACGGGATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCAGAGGCTGTCCCTATaGCTGCGCTTGGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRQRLSL*LRLVAS
Trigger: CGAGGCCACCAAGCGCAGCAATAGGGACAGCCTCTG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGTCTCAGCTCAGGCCTaGCCCAGCCCACTCGCATCT +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRVSAQA*PSPLAS
Trigger: AGATGCGAGTGGGCTGGGCAAGGCCTGAGCTGAGAC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACACGTCGCGCTGTGCTTaGGTGAGCGAGCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHTSRCA*VSERPR
Trigger: GCGGGGCCGCTCGCTCACCAAAGCACAGCGCGACGT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGAGGTGACCCCGAAGTaGGCCCAGCCTGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWEVTPK*AQPVGR
Trigger: CCTCCCCACAGGCTGGGCCAACTTCGGGGTCACCTC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTCGGGGATGATGACGTaGAGGGTCTCCACAGGCCGG +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSGMMT*RVSTGR
Trigger: CCGGCCTGTGGAGACCCTCAACGTCATCATCCCCGA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp ACCAGCGGCCGCTCTGGACTGCATAGGACTTCTCTGCCCGGAAGATaGGGGCCCGGTCACCACGAGACTGGCTGTCCACCTGACTGGGCT +
Preference number: 5 (lower is better)
Translates to: TSGRSGLHRTSLPGR*GPGHHETGCPPDWA
Trigger: AGCCCAGTCAGGTGGACAGCCAGTCTCGTGGTGACCGGGCCCGCATCTTCCGGGCAGAGAAGTCCTATGCAGTCCAGAGCGGCCGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GCCTCCAGCGGAGCGGCGCAGGTTTTCATAGTCCGTATCCGGTTCTaGTGCCCGGGCCTCATCTTCAGCAGGAGGCTGCAGGCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: ASSGAAQVFIVRIRF*CPGLIFSRRLQARG
Trigger: TCCCCTGGCCTGCAGCCTCCTGCTGAAGATGAGGCCCGGGCAGCAGAACCGGATACGGACTATGAAAACCTGCGCCGCTCCGCTGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CTGGGGTGGAGAACGGAACTCTCGGGTGCGCCTTGCGGTCTCGGCTaGGCTCATGGTGAAGGCTTTCATGAGGAGGCCGTAGCGACCCCG +
Preference number: 5 (lower is better)
Translates to: LGWRTELSGAPCGLG*AHGEGFHEEAVATP
Trigger: CGGGGTCGCTACGGCCTCCTCATGAAAGCCTTCACCATGAGCGCAGCCGAGACCGCAAGGCGCACCCGAGAGTTCCGTTCTCCACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp AAAGTGCTCACGTCGCCGGTCCCTGCGGACACCCGGCCCATCCCGTaGGGGATCCTCAGAGATTCGGATGGCCTCTTCGATGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: KVLTSPVPADTRPIP*GILRDSDGLFDGSQ
Trigger: CTGGCTGCCATCGAAGAGGCCATCCGAATCTCTGAGGATCCCGCACGGGATGGGCCGGGTGTCCGCAGGGACCGGCGACGTGAGCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp TGGGGTCCGGCATGCCTGCCAGGAGCTCCGTCACTGTCACCTTCTTaGCGCTGTCTACCAGCCCACCGCCAAACAGCGAGCCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: WGPACLPGAPSLSPS*RCLPAHRQTASPRA
Trigger: TGCTCTGGGGCTCGCTGTTTGGCGGTGGGCTGGTAGACAGCGCCAAGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGCCGGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGCCTTGGTGTGGGCCTaGCTGGCATCAACCACCACA +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRALVWA*LASTTT
Trigger: TGTGGTGGTTGATGCCAGCAAGGCCCACACCAAGGC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCGGGTGTCCCCTCCTaGGCAGTTCCATCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPGVPS*AVPSLP
Trigger: GGGCAAGGATGGAACTGCCAAGGAGGGGACACCCGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGGCCGGGGATCAAAGTaGCCTTCAGCGTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRGRGSK*PSASTV
Trigger: CACAGTGGACGCTGAAGGCAACTTTGATCCCCGGCC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCCCTCCGGCGCTGCTaGGACAGAAGTTTATGCCAC +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGALRRC*DRSLCH
Trigger: GTGGCATAAACTTCTGTCCAAGCAGCGCCGGAGGGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAGCAGCACCGCCACGTaGAAGCCAATGTCCCGTGCT +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSSTAT*KPMSRA
Trigger: AGCACGGGACATTGGCTTCAACGTGGCGGTGCTGCT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCCAGCTCCAGGAAGTaGCGCAGGCGCGGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGASSRK*RRRGSW
Trigger: CCACGACCCGCGCCTGCGCAACTTCCTGGAGCTGGC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp TTCTTCTCGGTGGTAGCGTCTTTCTCATTCTCCGCCCTCGCAGGCTaGGCCTCTACCCCAGCCTGGGCAGTGCCTCCGGGTGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: FFSVVASFSFSALAG*ASTPAWAVPPGVPS
Trigger: GGAGGGGACACCCGGAGGCACTGCCCAGGCTGGGGTAGAGGCTCAGCCTGCGAGGGCGGAGAATGAGAAAGACGCTACCACCGAGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GGACCAGGGAGAGCATCCCCTCCTCCTGGAAGAGGCTCTGTCGGTTaGGCAGGCTGCGCAGCTTGGTCTGCTTCTCCTCGTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GPGRASPPPGRGSVG*AGCAAWSASPRAAA
Trigger: AGCTGCAGCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCTTCCAGGAGGAGGGGATGCTCTCCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GCCTTGTGCCACGCGGTCTCTCGCCCAGACATTGTGCCCGTTCTCTaGCAGCCGGTCCACCAGAGTTGTCTGTGCAGGCGTCAGCCTCAC +
Preference number: 5 (lower is better)
Translates to: ALCHAVSRPDIVPVL*QPVHQSCLCRRQPH
Trigger: GTGAGGCTGACGCCTGCACAGACAACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAATGTCTGGGCGAGAGACCGCGTGGCACAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GGCCTCGTCCAGCAGGCGGTAGGGCACGAGGCGAGGATTTCTGCGTaGAGGGATGTCCTGCACAGCACTGTAGCTCCAGCCTTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: GLVQQAVGHEARISA*RDVLHSTVAPALCH
Trigger: GTGGCACAAGGCTGGAGCTACAGTGCTGTGCAGGACATCCCTGCACGCAGAAATCCTCGCCTCGTGCCCTACCGCCTGCTGGACGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TCCAGCGGAGCGGCGCAGGTTTTCATAGTCCGTATCCGGTTCTGCTaGCCGGGCCTCATCTTCAGCAGGAGGCTGCAGGCCAGGGGATGC +
Preference number: 5 (lower is better)
Translates to: SSGAAQVFIVRIRFC*PGLIFSRRLQARGC
Trigger: GCATCCCCTGGCCTGCAGCCTCCTGCTGAAGATGAGGCCCGGGCAGCAGAACCGGATACGGACTATGAAAACCTGCGCCGCTCCGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TTTCTTCAGGGGGCTCCTCACCAAAGTGCTCACGTCGCCGGTCCCTaGGGACACCCGGCCCATCCCGTGCGGGATCCTCAGAGATTCGGA +
Preference number: 5 (lower is better)
Translates to: FLQGAPHQSAHVAGP*GHPAHPVRDPQRFG
Trigger: TCCGAATCTCTGAGGATCCCGCACGGGATGGGCCGGGTGTCCGCAGGGACCGGCGACGTGAGCACTTTGGTGAGGAGCCCCCTGAAGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp ATACCTGCACAGCGCCATGAGGCAGTCCTCGATGACGTCGCGCTGTaGTTTGGTGAGCGAGCGGCCCCGCGACAGCCGGTACACTGTGTG +
Preference number: 5 (lower is better)
Translates to: IPAQRHEAVLDDVAL*FGERAAPRQPVHCV
Trigger: CACACAGTGTACCGGCTGTCGCGGGGCCGCTCGCTCACCAAAGCACAGCGCGACGTCATCGAGGACTGCCTCATGGCGCTGTGCAGGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp AGGAAGCCCACCACGGCATCCCAGAGGCGACTGTGCGCCAGACTCTaGTGGTTTCCGGTGCAGGGTCCCTGGATGTACTCGGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RKPTTASQRRLCARL*WFPVQGPWMYSVRL
Trigger: CAGCCTCACCGAGTACATCCAGGGACCCTGCACCGGAAACCAGCAGAGTCTGGCGCACAGTCGCCTCTGGGATGCCGTGGTGGGCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GCGAACACGTGCAGGAAGCCCACCACGGCATCCCAGAGGCGACTGTaGGCCAGACTCTGCTGGTTTCCGGTGCAGGGTCCCTGGATGTAC +
Preference number: 5 (lower is better)
Translates to: ANTCRKPTTASQRRL*ARLCWFPVQGPWMY
Trigger: GTACATCCAGGGACCCTGCACCGGAAACCAGCAGAGTCTGGCGCACAGTCGCCTCTGGGATGCCGTGGTGGGCTTCCTGCACGTGTTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CCTCCTCCTGGAAGAGGCTCTGTCGGTTGCGCAGGCTGCGCAGCTTaGTCTGCTTCTCCTCGTGCTGCAGCTCCTCTGAAGGCGGCTCGA +
Preference number: 5 (lower is better)
Translates to: PPPGRGSVGCAGCAA*SASPRAAAPLKAAR
Trigger: TCGAGCCGCCTTCAGAGGAGCTGCAGCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCTTCCAGGAGGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp GCCAGGGGTGTGGCCCCTGCGGTGCAGCGGAAGTGCTGGTGGAACTaGACCGGAAGGCTTAGCCGGAGAAACAGCATCTCCACCAGACTG +
Preference number: 5 (lower is better)
Translates to: ARGVAPAVQRKCWWN*TGRLSRRNSISTRL
Trigger: CAGTCTGGTGGAGATGCTGTTTCTCCGGCTAAGCCTTCCGGTCCAGTTCCACCAGCACTTCCGCTGCACCGCAGGGGCCACACCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CAGCCCAGCCGCTCTCCAGCACGCCGCGTGTCCACCTGTAGGAAGTaGTTGGGCATTCGGCTCCACGAGACAGGCATCAGCATCTGCACC +
Preference number: 5 (lower is better)
Translates to: QPSRSPARRVSTCRK*LGIRLHETGISICT
Trigger: GGTGCAGATGCTGATGCCTGTCTCGTGGAGCCGAATGCCCAACCACTTCCTACAGGTGGACACGCGGCGTGCTGGAGAGCGGCTGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp ACCTTCCCTGCCCGCTTACGCAATCGCCCGATGGTAGGGATGAAGTaGGAGCGTAGGAGCTCCGGCCTGGCACGGCTCACAATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TFPARLRNRPMVGMK*ERRSSGLARLTMGW
Trigger: CCAGCCCATTGTGAGCCGTGCCAGGCCGGAGCTCCTACGCTCCCACTTCATCCCTACCATCGGGCGATTGCGTAAGCGGGCAGGGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCATGGGTGCAGCCTCTaGTTGTCATCCCGTACCGGA +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGHGCSL*LSSRTG
Trigger: TCCGGTACGGGATGACAACAAGAGGCTGCACCCATG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGCCGGTCCACCAGAGTaGTCTGTGCAGGCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHAGPPE*SVQASA
Trigger: GGCTGACGCCTGCACAGACAACTCTGGTGGACCGGC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGGTGGTAACTGGGCGTaGCATGTTGATGGCGAACGG +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGGGNWA*HVDGER
Trigger: CCGTTCGCCATCAACATGCAACGCCCAGTTACCACC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGAGGTGACCCCGAAGTaGGCCCAGCCTGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRREVTPK*AQPVGR
Trigger: CCTCCCCACAGGCTGGGCCAACTTCGGGGTCACCTC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGATGCCCCAGAAGAGCTaGCGTGTGAGGTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRMPQKS*RVRCSS
Trigger: AGAGCTGCACCTCACACGCAAGCTCTTCTGGGGCAT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGCCACTGCCCAGCACTTaGGCTGGTGTGGATAGGAAG +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGPLPST*AGVDRK
Trigger: CTTCCTATCCACACCAGCCAAAGTGCTGGGCAGTGG...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGATCTCCTCCACGCTGTaGGGAAGCCCCAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWISSTL*GSPRMA
Trigger: GGCCATCCTGGGGCTTCCCAACAGCGTGGAGGAGAT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTCCTCAGCTTCTGCCTaGGCTTCCAGGCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWSSASA*ASRRSC
Trigger: GCAGCTGCGCCTGGAAGCCAAGGCAGAAGCTGAGGA...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAACAGCTCCTCTGCATaGGGGTTGGGCTCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRNSSSA*GLGSVS
Trigger: GCTGACAGAGCCCAACCCCAATGCAGAGGAGCTGTT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCGGTGCGTGGGCAAGTaGTACAGGGGCGTCATGCGG +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRCVGK*YRGVMR
Trigger: CCGCATGACGCCCCTGTACAACTTGCCCACGCACCG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GACATTGTGCCCGTTCTCTGCCAGCCGGTCCACCAGAGTTGTCTGTaGAGGCGTCAGCCTCACGTGGCTCAGGTCCAGAGGAGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: DIVPVLCQPVHQSCL*RRQPHVAQVQRSRL
Trigger: AAGCCGGCTCCTCTGGACCTGAGCCACGTGAGGCTGACGCCTGCACAGACAACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TGGTGGCCTCGTCCAGCAGGCGGTAGGGCACGAGGCGAGGATTTCTaGGTGCAGGGATGTCCTGCACAGCACTGTAGCTCCAGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: WWPRPAGGRARGEDF*VQGCPAQHCSSSLV
Trigger: CACAAGGCTGGAGCTACAGTGCTGTGCAGGACATCCCTGCACGCAGAAATCCTCGCCTCGTGCCCTACCGCCTGCTGGACGAGGCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GCTCCTGGTCAGGAGGCTCGATGTTGTAGCCATAGCCCAGCAGGGTaGGCACAGCCTGGCAGAGGCTGTCCCTATTGCTGCGCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: APGQEARCCSHSPAG*AQPGRGCPYCCAWW
Trigger: CCACCAAGCGCAGCAATAGGGACAGCCTCTGCCAGGCTGTGCGCACCCTGCTGGGCTATGGCTACAACATCGAGCCTCCTGACCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp AGCCGGTACACTGTGTGTAGCATGGAGTCCACCATGATGGCGCGGTaGTCGGTGCCCGCAAAGAGTGGCGCGCACTTGGTGATGAGCGGC +
Preference number: 5 (lower is better)
Translates to: SRYTVCSMESTMMAR*SVPAKSGAHLVMSG
Trigger: GCCGCTCATCACCAAGTGCGCGCCACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGTGGACTCCATGCTACACACAGTGTACCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp GGAAGATGCGGGCCCGGTCACCACGAGACTGGCTGTCCACCTGACTaGGCTCCTGGTCAGGAGGCTCGATGTTGTAGCCATAGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GRCGPGHHETGCPPD*APGQEARCCSHSPA
Trigger: TGCTGGGCTATGGCTACAACATCGAGCCTCCTGACCAGGAGCCCAGTCAGGTGGACAGCCAGTCTCGTGGTGACCGGGCCCGCATCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp TCGGCTCCACGAGACAGGCATCAGCATCTGCACCTCCAGCCTTGGTaGGCACTGTGGGGCTGGGTTCTTGCGCTCGCTCAGGAACATGGC +
Preference number: 5 (lower is better)
Translates to: SAPRDRHQHLHLQPW*ALWGWVLALAQEHG
Trigger: GCCATGTTCCTGAGCGAGCGCAAGAACCCAGCCCCACAGTGCCCACCAAGGCTGGAGGTGCAGATGCTGATGCCTGTCTCGTGGAGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CCAGCCGCTCTCCAGCACGCCGCGTGTCCACCTGTAGGAAGTGGTTaGGCATTCGGCTCCACGAGACAGGCATCAGCATCTGCACCTCCA +
Preference number: 5 (lower is better)
Translates to: PAALQHAACPPVGSG*AFGSTRQASASAPP
Trigger: TGGAGGTGCAGATGCTGATGCCTGTCTCGTGGAGCCGAATGCCCAACCACTTCCTACAGGTGGACACGCGGCGTGCTGGAGAGCGGCTGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CGGCTGAACCAGTGCGCCATCTTTGCCCAGGGTGGGGATCTGCAGTaGGAGGCTGATGATGCCCACGAGGTCATCCAAGGGCACGAGGGA +
Preference number: 5 (lower is better)
Translates to: RLNQCAIFAQGGDLQ*EADDAHEVIQGHEG
Trigger: TCCCTCGTGCCCTTGGATGACCTCGTGGGCATCATCAGCCTCCCACTGCAGATCCCCACCCTGGGCAAAGATGGCGCACTGGTTCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CATGGAGTCCACCATGATGGCGCGGTGCTCGGTGCCCGCAAAGAGTaGCGCGCACTTGGTGATGAGCGGCAGCACAGCCAGACAGAGGTA +
Preference number: 5 (lower is better)
Translates to: HGVHHDGAVLGARKE*RALGDERQHSQTEV
Trigger: TACCTCTGTCTGGCTGTGCTGCCGCTCATCACCAAGTGCGCGCCACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGTGGACTCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp AGGATGCTCTCAGCCAGCTCCAGGAAGTTGCGCAGGCGCGGGTCGTaGGGCACATGCTCTGACAGGTTGGTAAGCAGCACCGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: RMLSASSRKLRRRGS*GTCSDRLVSSTATL
Trigger: CAACGTGGCGGTGCTGCTTACCAACCTGTCAGAGCATGTGCCCCACGACCCGCGCCTGCGCAACTTCCTGGAGCTGGCTGAGAGCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCCTGGAGCTCCCCACTaGCGGTTGACAGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRPGAPH*RLTGAG
Trigger: ACCTGCACCTGTCAACCGCAAGTGGGGAGCTCCAGG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGAGCGACTCTCCATACTaGATCTCAGGGGGACCCATG +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSDSPY*ISGGPM
Trigger: CATGGGTCCCCCTGAGATCAAGTATGGAGAGTCGCT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCCGGTCCACCAGAGTaGTCTGTGCAGGCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGAGPPE*SVQASA
Trigger: GGCTGACGCCTGCACAGACAACTCTGGTGGACCGGC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACACTGTAGCTCCAGCCTaGTGCCACGCGGTCTCTCGC +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHTVAPA*CHAVSR
Trigger: GCGAGAGACCGCGTGGCACAAGGCTGGAGCTACAGT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGGAAGCGGATCTCCTTaGACTCGCCGCCCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRGSGSP*TRRPQG
Trigger: TCCTTGGGGGCGGCGAGTCAAAGGAGATCCGCTTCC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAAGAGTGGCGCGCACTaGGTGATGAGCGGCAGCACA +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWKSGAH*VMSGST
Trigger: TGTGCTGCCGCTCATCACCAAGTGCGCGCCACTCTT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCCTCAGCTTCTGCCTaGGCTTCCAGGCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSSASA*ASRRSC
Trigger: GCAGCTGCGCCTGGAAGCCAAGGCAGAAGCTGAGGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACGGTGCGTGGGCAAGTaGTACAGGGGCGTCATGCGG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGRCVGK*YRGVMR
Trigger: CCGCATGACGCCCCTGTACAACTTGCCCACGCACCG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCGGTGCGTGGGCAAGTaGTACAGGGGCGTCATGCGG +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRCVGK*YRGVMR
Trigger: CCGCATGACGCCCCTGTACAACTTGCCCACGCACCG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGCCAGCTCCAGGAAGTaGCGCAGGCGCGGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQASSRK*RRRGSW
Trigger: CCACGACCCGCGCCTGCGCAACTTCCTGGAGCTGGC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGATGGTGCGGAGCGTCTaGACTCCCATGGCGATGTCC +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWMVRSV*TPMAMS
Trigger: GGACATCGCCATGGGAGTCAAGACGCTCCGCACCAT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp TCAGCAGGCCCGGTGGAGGGTCAGGTTTGCGCTCATTGTGGGCTGTaGTCTCCAGAGAGGCCAGATCCATGCCCAGCAGCTCCGCAATCC +
Preference number: 5 (lower is better)
Translates to: SAGPVEGQVCAHCGL*SPERPDPCPAAPQS
Trigger: GGATTGCGGAGCTGCTGGGCATGGATCTGGCCTCTCTGGAGATCACAGCCCACAATGAGCGCAAACCTGACCCTCCACCGGGCCTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp AGAGCATCCCCTCCTCCTGGAAGAGGCTCTGTCGGTTGCGCAGGCTaGGCAGCTTGGTCTGCTTCTCCTCGTGCTGCAGCTCCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: RASPPPGRGSVGCAG*AAWSASPRAAAPLK
Trigger: CTTCAGAGGAGCTGCAGCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCTTCCAGGAGGAGGGGATGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TCTGCGTGCAGGGATGTCCTGCACAGCACTGTAGCTCCAGCCTTGTaGCACGCGGTCTCTCGCCCAGACATTGTGCCCGTTCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SACRDVLHSTVAPAL*HAVSRPDIVPVLCQ
Trigger: CTGGCAGAGAACGGGCACAATGTCTGGGCGAGAGACCGCGTGGCACAAGGCTGGAGCTACAGTGCTGTGCAGGACATCCCTGCACGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp AAACTCGAAGTACCAGCGGCCGCTCTGGACTGCATAGGACTTCTCTaGCCGGAAGATGCGGGCCCGGTCACCACGAGACTGGCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: KLEVPAAALDCIGLL*PEDAGPVTTRLAVH
Trigger: GTGGACAGCCAGTCTCGTGGTGACCGGGCCCGCATCTTCCGGGCAGAGAAGTCCTATGCAGTCCAGAGCGGCCGCTGGTACTTCGAGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CATCCTGGCCCAGGTTCAGGTGGCCCACCTGACCAGGTCCCAAGCTaGAGACTGGCAGGAAGCCGTCCCCTATCTCAATGTCACGGAAGG +
Preference number: 5 (lower is better)
Translates to: HPGPGSGGPPDQVPS*RLAGSRPLSQCHGR
Trigger: CCTTCCGTGACATTGAGATAGGGGACGGCTTCCTGCCAGTCTGCAGCTTGGGACCTGGTCAGGTGGGCCACCTGAACCTGGGCCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GTTGATCTGCTCCTGGGGTGGAGAACGGAACTCTCGGGTGCGCCTTaGGGTCTCGGCTGCGCTCATGGTGAAGGCTTTCATGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VDLLLGWRTELSGAP*GLGCAHGEGFHEEA
Trigger: GGCCTCCTCATGAAAGCCTTCACCATGAGCGCAGCCGAGACCGCAAGGCGCACCCGAGAGTTCCGTTCTCCACCCCAGGAGCAGATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CATGGCCTGCAGCTCCCGGGACAACGTAACCACGCTGAGGTCTGGTaGCTGGGGATTGTAGCCTTCTCGGGGGTCATATGTCTGGGCGGT +
Preference number: 5 (lower is better)
Translates to: HGLQLPGQRNHAEVW*LGIVAFSGVICLGG
Trigger: ACCGCCCAGACATATGACCCCCGAGAAGGCTACAATCCCCAGCCACCAGACCTCAGCGTGGTTACGTTGTCCCGGGAGCTGCAGGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp ACACCATGTTCTCATCTTCATCGCCCTCTACCTCCTCGCCGGCCCTaGAGCCCCAGCCAGAGCCATCACCAGACCCTGCCCCTGACATGT +
Preference number: 5 (lower is better)
Translates to: TPCSHLHRPLPPRRP*SPSQSHHQTLPLTC
Trigger: ACATGTCAGGGGCAGGGTCTGGTGATGGCTCTGGCTGGGGCTCCAGGGCCGGCGAGGAGGTAGAGGGCGATGAAGATGAGAACATGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGACGTCAAAGGCCAACTaGTCAGTCATGGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGTSKAN*SVMDRE
Trigger: CTCCCGATCCATGACTGACAAGTTGGCCTTTGACGT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCTTGGTGTGGGCCTaGCTGGCATCAACCACCACA +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVALVWA*LASTTT
Trigger: TGTGGTGGTTGATGCCAGCAAGGCCCACACCAAGGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACGCAGGCTGCGCAGCTaGGTCTGCTTCTCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRRLRS*VCFSSC
Trigger: GCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGCG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACGCAGGCTGCGCAGCTaGGTCTGCTTCTCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGERRLRS*VCFSSC
Trigger: GCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGCG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGAAGAGGCTCTGTCGGTaGCGCAGGCTGCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRKRLCR*RRLRSL
Trigger: CAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCTT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCGGCCCACAAAGATGTaGGGGCGGATGCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRPTKM*GRMLVT
Trigger: TGTCACCAGCATCCGCCCCAACATCTTTGTGGGCCG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCGGGGCCAAGAGGTGTaGTCCCGGAGAAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRGQEV*SRRSHW
Trigger: CCAGTGACTTCTCCGGGACAACACCTCTTGGCCCCG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGTGCAGCCTCTTGTaGTCATCCCGTACCGGACCA +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVGCSLL*SSRTGP
Trigger: TGGTCCGGTACGGGATGACAACAAGAGGCTGCACCC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGATGAGGACCTCGCCATaGAGGGTGAAGATGATGGTG +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRMRTSP*RVKMMV
Trigger: CACCATCATCTTCACCCTCAATGGCGAGGTCCTCAT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCTGTGGACATTGCCTaGTTCATCTCCCATGGTCAC +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGAVDIA*FISHGH
Trigger: GTGACCATGGGAGATGAACAAGGCAATGTCCACAGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGACCTGTAGGAAGTGGTaGGGCATTCGGCTCCACGAG +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWTCRKW*GIRLHE
Trigger: CTCGTGGAGCCGAATGCCCAACCACTTCCTACAGGT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGTCCACGCTCTCACCGTaGACAAAGACAGCAAAACGC +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRSTLSP*TKTAKR
Trigger: GCGTTTTGCTGTCTTTGTCAACGGTGAGAGCGTGGA...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTGGTTGGTAAGGAGCTaGAGTGGCATCTTGGCGAAC +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGWLVRS*SGILAN
Trigger: GTTCGCCAAGATGCCACTCAAGCTCCTTACCAACCA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGAGGTGACCCCGAAGTaGGCCCAGCCTGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQEVTPK*AQPVGR
Trigger: CCTCCCCACAGGCTGGGCCAACTTCGGGGTCACCTC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAACAGCTCCTCTGCATaGGGGTTGGGCTCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWNSSSA*GLGSVS
Trigger: GCTGACAGAGCCCAACCCCAATGCAGAGGAGCTGTT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGCAGCTTCCTCCTTCTTaGGAGGGGGTGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRQLPPS*EGVEVV
Trigger: CACCACCTCCACCCCCTCCAAAGAAGGAGGAAGCTG...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGAGCTCCTTCTCCCGCTaGAAGATGACAAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWSSFSR*KMTRGT
Trigger: GGTGCCCCTTGTCATCTTCAAGCGGGAGAAGGAGCT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCTTCACTTGCTCTTGTaGGTCTCGGAGCTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRLHLLL*VSELPK
Trigger: TTTGGGGAGCTCCGAGACCAACAAGAGCAAGTGAAG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCAAACCCATGTGGGGTaGTGTCGAAGTAGTCACTGC +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRQTHVG*CRSSHC
Trigger: GCAGTGACTACTTCGACACAACCCCACATGGGTTTG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGTGGTCCTCATACTGCTaGCGGAAACAGTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGWSSYC*RKQSPA
Trigger: TGCTGGAGACTGTTTCCGCAAGCAGTATGAGGACCA...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGACCACTTATCCAAATaGAGGGCCTCCACACCGGCC +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWDHLSK*RASTPA
Trigger: GGCCGGTGTGGAGGCCCTCAATTTGGATAAGTGGTC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS TCA 90 bp ATCCTCAGAGATTCGGATGGCCTCTTCGATGGCAGCCAGCAGCCCTaGGCCACCCTCACCCCTCAGGGCAGGTCCAAAGCACTCGGGTTT +
Preference number: 5 (lower is better)
Translates to: ILRDSDGLFDGSQQP*ATLTPQGRSKALGF
Trigger: AAACCCGAGTGCTTTGGACCTGCCCTGAGGGGTGAGGGTGGCTCAGGGCTGCTGGCTGCCATCGAAGAGGCCATCCGAATCTCTGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TGTGGTGACTGCTTCAAACTCGAAGTACCAGCGGCCGCTCTGGACTaGATAGGACTTCTCTGCCCGGAAGATGCGGGCCCGGTCACCACG +
Preference number: 5 (lower is better)
Translates to: CGDCFKLEVPAAALD*IGLLCPEDAGPVTT
Trigger: CGTGGTGACCGGGCCCGCATCTTCCGGGCAGAGAAGTCCTATGCAGTCCAGAGCGGCCGCTGGTACTTCGAGTTTGAAGCAGTCACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CAACTCAGGTACATACGACTGTGTGCGTGCCGGAGCAGGATGGCGTaGCCATACAAGAGTGTCCTGTGTCCCCCGCCCTGGGATGACTCC +
Preference number: 5 (lower is better)
Translates to: QLRYIRLCACRSRMA*PYKSVLCPPPWDDS
Trigger: GGAGTCATCCCAGGGCGGGGGACACAGGACACTCTTGTATGGCCACGCCATCCTGCTCCGGCACGCACACAGTCGTATGTACCTGAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
CDS CCA 90 bp GACCACATCCTCCGGGGCCAAGAGGTGTTGTCCCGGAGAAGTCACTaGGCGTGCCACATGCCCTGTCCAAAGATGCAGCCCATCAAAGCC +
Preference number: 5 (lower is better)
Translates to: DHILRGQEVLSRRSH*ACHMPCPKMQPIKA
Trigger: GGCTTTGATGGGCTGCATCTTTGGACAGGGCATGTGGCACGCCCAGTGACTTCTCCGGGACAACACCTCTTGGCCCCGGAGGATGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp ACCCGTCCACTGCTAACCACAGCCTCCAGGTGGGCGATGAACTCCTaGGAGATGTCCATCCAGCGAAGCAGCTGCTGCAGGAAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: TRPLLTTASRWAMNS*EMSIQRSSCCRKPK
Trigger: CTTCGGCTTCCTGCAGCAGCTGCTTCGCTGGATGGACATCTCCCAGGAGTTCATCGCCCACCTGGAGGCTGTGGTTAGCAGTGGACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp ATCCATGTCAGCAGGCCCGGTGGAGGGTCAGGTTTGCGCTCATTGTaGGCTGTGATCTCCAGAGAGGCCAGATCCATGCCCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IHVSRPGGGSGLRSL*AVISREARSMPSSS
Trigger: GGAGCTGCTGGGCATGGATCTGGCCTCTCTGGAGATCACAGCCCACAATGAGCGCAAACCTGACCCTCCACCGGGCCTGCTGACATGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp AGCAGGATGGCGTGGCCATACAAGAGTGTCCTGTGTCCCCCGCCCTaGGATGACCACTTATCCAAATTGAGGGCCTCCACACCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SRMAWPYKSVLCPPP*DDHLSKLRASTPAS
Trigger: GGAGGCCGGTGTGGAGGCCCTCAATTTGGATAAGTGGTCATCCCAGGGCGGGGGACACAGGACACTCTTGTATGGCCACGCCATCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS CCA 90 bp CAACTCAGGTACATACGACTGTGTGCGTGCCGGAGCAGGATGGCGTaGCCATACAAGAGTGTCCTGTGTCCCCCGCCCTGGGATGACCAC +
Preference number: 5 (lower is better)
Translates to: QLRYIRLCACRSRMA*PYKSVLCPPPWDDH
Trigger: GTGGTCATCCCAGGGCGGGGGACACAGGACACTCTTGTATGGCCACGCCATCCTGCTCCGGCACGCACACAGTCGTATGTACCTGAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCCCTCCACATCTCTCTaGGGGGCCACATCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWPSTSL*GATSSF
Trigger: GAAGCTGGATGTGGCCCCCAAGAGAGATGTGGAGGG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGAGGCTCTGTCGGTaGCGCAGGCTGCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRKRLCR*RRLRSL
Trigger: CAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCTT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGAGAAGAGCGCACAGTaGGTGCGATTGCCACGGATC +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHEKSAQ*VRLPRI
Trigger: GATCCGTGGCAATCGCACCAACTGTGCGCTCTTCTC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGAGAAGAGCGCACAGTaGGTGCGATTGCCACGGATC +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLREKSAQ*VRLPRI
Trigger: GATCCGTGGCAATCGCACCAACTGTGCGCTCTTCTC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCGGCCCACAAAGATGTaGGGGCGGATGCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWRPTKM*GRMLVT
Trigger: TGTCACCAGCATCCGCCCCAACATCTTTGTGGGCCG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACGGGGCCAAGAGGTGTaGTCCCGGAGAAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGERGQEV*SRRSHW
Trigger: CCAGTGACTTCTCCGGGACAACACCTCTTGGCCCCG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCACGGGGCAGCCGTaGATACGAAAGGAGATGGAC +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRCTGQP*IRKEMD
Trigger: GTCCATCTCCTTTCGTATCAACGGCTGCCCCGTGCA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGGTGCAGCCTCTTGTaGTCATCCCGTACCGGACCA +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGCSLL*SSRTGP
Trigger: TGGTCCGGTACGGGATGACAACAAGAGGCTGCACCC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCATGGGTGCAGCCTCTaGTTGTCATCCCGTACCGGA +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHHGCSL*LSSRTG
Trigger: TCCGGTACGGGATGACAACAAGAGGCTGCACCCATG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACAGAGGCTGTCCCTATaGCTGCGCTTGGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEQRLSL*LRLVAS
Trigger: CGAGGCCACCAAGCGCAGCAATAGGGACAGCCTCTG...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCGGGTGTCCCCTCCTaGGCAGTTCCATCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPGVPS*AVPSLP
Trigger: GGGCAAGGATGGAACTGCCAAGGAGGGGACACCCGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAAGAACCCTCTCTTCTaGTTCTTCTCGGTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGKNPLF*FFSVVA
Trigger: CGCTACCACCGAGAAGAACAAGAAGAGAGGGTTCTT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACGTCGCGCTGTGCTTaGGTGAGCGAGCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRTSRCA*VSERPR
Trigger: GCGGGGCCGCTCGCTCACCAAAGCACAGCGCGACGT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGGCCGGGGATCAAAGTaGCCTTCAGCGTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRGRGSK*PSASTV
Trigger: CACAGTGGACGCTGAAGGCAACTTTGATCCCCGGCC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGCCGGGGATCAAAGTaGCCTTCAGCGTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGRGSK*PSASTV
Trigger: CACAGTGGACGCTGAAGGCAACTTTGATCCCCGGCC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCCACTGCCCAGCACTTaGGCTGGTGTGGATAGGAAG +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHPLPST*AGVDRK
Trigger: CTTCCTATCCACACCAGCCAAAGTGCTGGGCAGTGG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGATCATTTCCTTCTCCTaGTTGGAGGCATGGCCACCA +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGIISFS*LEAWPP
Trigger: TGGTGGCCATGCCTCCAACAAGGAGAAGGAAATGAT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCTCCTCCACGCTGTaGGGAAGCCCCAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRISSTL*GSPRMA
Trigger: GGCCATCCTGGGGCTTCCCAACAGCGTGGAGGAGAT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAATCTCCTCCACGCTGTaGGGAAGCCCCAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEISSTL*GSPRMA
Trigger: GGCCATCCTGGGGCTTCCCAACAGCGTGGAGGAGAT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGCCTGACTGGACCACCTaGGCCATTTTGCTCTTATTG +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRPDWTT*AILLLL
Trigger: CAATAAGAGCAAAATGGCCAAGGTGGTCCAGTCAGG...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032813.10
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGCCCTCCGGCGCTGCTaGGACAGAAGTTTATGCCAC +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRALRRC*DRSLCH
Trigger: GTGGCATAAACTTCTGTCCAAGCAGCGCCGGAGGGC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGGCTACCGACATGGCTTaGGAGAAGTTTCTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRATDMA*EKFLFP
Trigger: GGGAAAGAGAAACTTCTCCAAAGCCATGTCGGTAGC...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGCTACCGACATGGCTTaGGAGAAGTTTCTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGATDMA*EKFLFP
Trigger: GGGAAAGAGAAACTTCTCCAAAGCCATGTCGGTAGC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGAATCATCTCCACATaGGACGAAGACTCCACGAGC +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGRIIST*DEDSTS
Trigger: GCTCGTGGAGTCTTCGTCCAATGTGGAGATGATTCT...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAAGCAGCACCGCCACGTaGAAGCCAATGTCCCGTGCT +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSSTAT*KPMSRA
Trigger: AGCACGGGACATTGGCTTCAACGTGGCGGTGCTGCT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCAGCACCGCCACGTaGAAGCCAATGTCCCGTGCT +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWSSTAT*KPMSRA
Trigger: AGCACGGGACATTGGCTTCAACGTGGCGGTGCTGCT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGCCAGCTCCAGGAAGTaGCGCAGGCGCGGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAASSRK*RRRGSW
Trigger: CCACGACCCGCGCCTGCGCAACTTCCTGGAGCTGGC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCAGCTTCCTCCTTCTTaGGAGGGGGTGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRQLPPS*EGVEVV
Trigger: CACCACCTCCACCCCCTCCAAAGAAGGAGGAAGCTG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGAGCTCCTTCTCCCGCTaGAAGATGACAAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSSFSR*KMTRGT
Trigger: GGTGCCCCTTGTCATCTTCAAGCGGGAGAAGGAGCT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp GCAACTCCTGGGCCTTCTCTCGATCCCGTGCCTTCTCCTTGGCCGTaGGCGTGTCGTAGGGAACCAGTAGAGGATGAGACCCACCTCCTT +
Preference number: 5 (lower is better)
Translates to: ATPGPSLDPVPSPWP*ACRREPVEDETHLL
Trigger: AAGGAGGTGGGTCTCATCCTCTACTGGTTCCCTACGACACGCTCACGGCCAAGGAGAAGGCACGGGATCGAGAGAAGGCCCAGGAGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CAGCTCAGGCCTTGCCCAGCCCACTCGCATCTCTCCTGTGGTGACTaGTTCAAACTCGAAGTACCAGCGGCCGCTCTGGACTGCATAGGA +
Preference number: 5 (lower is better)
Translates to: QLRPCPAHSHLSCGD*FKLEVPAAALDCIG
Trigger: TCCTATGCAGTCCAGAGCGGCCGCTGGTACTTCGAGTTTGAAGCAGTCACCACAGGAGAGATGCGAGTGGGCTGGGCAAGGCCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GTGGGACACCAGCTCCTGCAAGGACTGAGGCTTGTGCTCCTCAGGTaGCGGCTCCTCCTCAGGCTTCTCCTCTGTCTTCTTCACCAGCTT +
Preference number: 5 (lower is better)
Translates to: VGHQLLQGLRLVLLR*RLLLRLLLCLLHQL
Trigger: AAGCTGGTGAAGAAGACAGAGGAGAAGCCTGAGGAGGAGCCGGCACCTGAGGAGCACAAGCCTCAGTCCTTGCAGGAGCTGGTGTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TCATTGAGGATGGGCACATCGAACACCAGGCGTCGAAGCAGGTGCTaGAGCATGGACGGGCGGATATACCTGCACAGCGCCATGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLRMGTSNTRRRSRC*SMDGRIYLHSAMRQ
Trigger: CTGCCTCATGGCGCTGTGCAGGTATATCCGCCCGTCCATGCTGCAGCACCTGCTTCGACGCCTGGTGTTCGATGTGCCCATCCTCAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp AAGCCGGTGGCCAGATCCACCAGGCAGCCAATGACAAGGTCTGTGTaGCTGATTCGGCCCTGCTGTCCGGGACTCACAAAATCTCCACCC +
Preference number: 5 (lower is better)
Translates to: KPVARSTRQPMTRSV*LIRPCCPGLTKSPP
Trigger: GGGTGGAGATTTTGTGAGTCCCGGACAGCAGGGCCGAATCAGCCACACAGACCTTGTCATTGGCTGCCTGGTGGATCTGGCCACCGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp GACACTTGTACGTCATCCAGGATGACATCGTCTCCGAACTGGTGCTaGGCGATGTGCTGGAAGAGGGTGGTGAGGACGGGCAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: DTCTSSRMTSSPNWC*AMCWKRVVRTGSRA
Trigger: GGCTCTGCTGCCCGTCCTCACCACCCTCTTCCAGCACATCGCCCAGCACCAGTTCGGAGACGATGTCATCCTGGATGACGTACAAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCCTCCACATCTCTCTaGGGGGCCACATCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPSTSL*GATSSF
Trigger: GAAGCTGGATGTGGCCCCCAAGAGAGATGTGGAGGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAAGAGGCTCTGTCGGTaGCGCAGGCTGCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQKRLCR*RRLRSL
Trigger: CAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCTT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGAGAAGAGCGCACAGTaGGTGCGATTGCCACGGATC +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWEKSAQ*VRLPRI
Trigger: GATCCGTGGCAATCGCACCAACTGTGCGCTCTTCTC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACGGCCCACAAAGATGTaGGGGCGGATGCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRPTKM*GRMLVT
Trigger: TGTCACCAGCATCCGCCCCAACATCTTTGTGGGCCG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTGCACGGGGCAGCCGTaGATACGAAAGGAGATGGAC +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWCTGQP*IRKEMD
Trigger: GTCCATCTCCTTTCGTATCAACGGCTGCCCCGTGCA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACATGGGTGCAGCCTCTaGTTGTCATCCCGTACCGGA +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGHGCSL*LSSRTG
Trigger: TCCGGTACGGGATGACAACAAGAGGCTGCACCCATG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCCGGTCCACCAGAGTaGTCTGTGCAGGCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARAGPPE*SVQASA
Trigger: GGCTGACGCCTGCACAGACAACTCTGGTGGACCGGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGATGAGGACCTCGCCATaGAGGGTGAAGATGATGGTG +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWMRTSP*RVKMMV
Trigger: CACCATCATCTTCACCCTCAATGGCGAGGTCCTCAT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGGTGGTAACTGGGCGTaGCATGTTGATGGCGAACGG +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWGGNWA*HVDGER
Trigger: CCGTTCGCCATCAACATGCAACGCCCAGTTACCACC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGGTGGTAACTGGGCGTaGCATGTTGATGGCGAACGG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGGGNWA*HVDGER
Trigger: CCGTTCGCCATCAACATGCAACGCCCAGTTACCACC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCGGAGTGGAAGGTGGTaGGGTCATCATGGCAACCTT +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHRSGRW*GHHGNL
Trigger: AAGGTTGCCATGATGACCCAACCACCTTCCACTCCG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGCGGAGTGGAAGGTGGTaGGGTCATCATGGCAACCTT +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRSGRW*GHHGNL
Trigger: AAGGTTGCCATGATGACCCAACCACCTTCCACTCCG...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGAAGCTCATGTCATGTaGATGGTAGTCAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGEAHVM*MVVRSD
Trigger: GTCACTCCTGACTACCATCAACATGACATGAGCTTC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGTCACCGCCCTGACTTaGCTGAGGTCGAAGCTCATG +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRVTALT*LRSKLM
Trigger: CATGAGCTTCGACCTCAGCAAAGTCAGGGCGGTGAC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGAGGACCTGGAAGAAGGTGTaGCTTTCTTTCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: PSCLGRSSQWRRHLRWGRTWKKV*LSFPLA
Trigger: AGCCAATGGGAAAGAAAGCAACACCTTCTTCCAGGT...CCTCCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAACCTGTAGGAAGTGGTaGGGCATTCGGCTCCACGAG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGTCRKW*GIRLHE
Trigger: CTCGTGGAGCCGAATGCCCAACCACTTCCTACAGGT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAACGTCGCGCTGTGCTTaGGTGAGCGAGCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGTSRCA*VSERPR
Trigger: GCGGGGCCGCTCGCTCACCAAAGCACAGCGCGACGT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGGGGTGTACTCTGCGAACTaGTTAATGAAGGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VPSCLGRSSQWRRHLRWGVYSAN*LMKESS
Trigger: GCTGGACTCCTTCATTAACAAGTTCGCAGAGTACAC...CCCCCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATTCCCCAGGAGGGAATaGAGGTGGTCGGAGGTGACC +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEFPRRE*RWSEVT
Trigger: GGTCACCTCCGACCACCTCAATTCCCTCCTGGGGAA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCCGGTTGTGCAGCCTaGACTGCTGGTACAGGAGCC +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPGCAA*TAGTGA
Trigger: GGCTCCTGTACCAGCAGTCAAGGCTGCACAACCGGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGCACCCGTTTCTCCTTaGCAGGCACTGATCATCTGC +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHAPVSP*QALIIC
Trigger: GCAGATGATCAGTGCCTGCAAAGGAGAAACGGGTGC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATGCCTCTCGAAGGCATaGAGGTCCAGGACGCTGCAC +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRCLSKA*RSRTLH
Trigger: GTGCAGCGTCCTGGACCTCAATGCCTTCGAGAGGCA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACATGCTCTGACAGGTaGGTAAGCAGCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWTCSDR*VSSTAT
Trigger: CGTGGCGGTGCTGCTTACCAACCTGTCAGAGCATGT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp AACTCATTGAGGATGGGCACATCGAACACCAGGCGTCGAAGCAGGTaGTGCAGCATGGACGGGCGGATATACCTGCACAGCGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: NSLRMGTSNTRRRSR*CSMDGRIYLHSAMR
Trigger: CCTCATGGCGCTGTGCAGGTATATCCGCCCGTCCATGCTGCAGCACCTGCTTCGACGCCTGGTGTTCGATGTGCCCATCCTCAATGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CCGTCTGGTCCAGGTGATAGAGCACTGCGGACACTTCCTGAACTCTaGGCACGATTTTCTCGGGATCATCGGCATCTTCCTCGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: PSGPGDRALRTLPEL*ARFSRDHRHLPRGL
Trigger: CAGGCCGCGAGGAAGATGCCGATGATCCCGAGAAAATCGTGCGCAGAGTTCAGGAAGTGTCCGCAGTGCTCTATCACCTGGACCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp ACAGTTCCGTCCTCGTTCACCATGCCCAGCCCCTCTGCCTTGTTCTaGCTCTCGAAGGCATTGAGGTCCAGGACGCTGCACGTTTGCATC +
Preference number: 5 (lower is better)
Translates to: TVPSSFTMPSPSALF*LSKALRSRTLHVCI
Trigger: GATGCAAACGTGCAGCGTCCTGGACCTCAATGCCTTCGAGAGGCAGAACAAGGCAGAGGGGCTGGGCATGGTGAACGAGGACGGAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp AGCCCAAGGTACCTCCCTGTGGTCACATGTCTGATTCTTAGTGGCTaGCCCCAGCGGAGATGGCTTCCACTCCAGCTGATTCTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SPRYLPVVTCLILSG*PQRRWLPLQLILSG
Trigger: GCCGCTGAGAATCAGCTGGAGTGGAAGCCATCTCCGCTGGGGCCAGCCACTAAGAATCAGACATGTGACCACAGGGAGGTACCTTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp GTAGCCTTGGTGTGGGCCTTGCTGGCATCAACCACCACAAGGCCTTaGTCCTCAGTGAGCCCAAGGTACCTCCCTGTGGTCACATGTCTG +
Preference number: 5 (lower is better)
Translates to: VALVWALLASTTTRP*SSVSPRYLPVVTCL
Trigger: CAGACATGTGACCACAGGGAGGTACCTTGGGCTCACTGAGGACCAAGGCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACCAAGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp AACTGGTTGTACAGGCCGGCAGTGCTGTATATCATCCGGGCAGCCTaGGACTCCTCCTGCTGGCATCGCGTCAGTGACAACGCATCATCC +
Preference number: 5 (lower is better)
Translates to: NWLYRPAVLYIIRAA*DSSCWHRVSDNASS
Trigger: GGATGATGCGTTGTCACTGACGCGATGCCAGCAGGAGGAGTCCCAGGCTGCCCGGATGATATACAGCACTGCCGGCCTGTACAACCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp GAGCCCCGTGGCTTCCCGCTGAAGCTATCGAGACCCTTTATGAACTaGTTGTACAGGCCGGCAGTGCTGTATATCATCCGGGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: EPRGFPLKLSRPFMN*LYRPAVLYIIRAAW
Trigger: CCAGGCTGCCCGGATGATATACAGCACTGCCGGCCTGTACAACCAGTTCATAAAGGGTCTCGATAGCTTCAGCGGGAAGCCACGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp GCGGCTGACAGCGGCATGATGTTCTTCTGCTTCCCCAGCTCAAACTaGACCACGTTCTGGTGGGTGGGCAGCACGAAGACAGCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: AADSGMMFFCFPSSN*TTFWWVGSTKTAGN
Trigger: GTTTCCTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAAGCAGAAGAACATCATGCCGCTGTCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CGCTGTTGGGAAGCCCCAGGATGGCCCGCTCTCGAGGAGACTTGGTaGTGTAGACAGAGCAGGCGTTGTATTCATTCAGCTCAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: RCWEAPGWPALEETW*CRQSRRCIHSAQAP
Trigger: TGGAGCCTGAGCTGAATGAATACAACGCCTGCTCTGTCTACACCACCAAGTCTCCTCGAGAGCGGGCCATCCTGGGGCTTCCCAACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGGTACATTCTGCGCGTaGCTGGTGGGTTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGGTFCA*LVGSRK
Trigger: CTTTCTGGAACCCACCAGCAACGCGCAGAATGTACC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAACCACCACAAGGCCTaGGTCCTCAGTGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGENHHKA*VLSEPK
Trigger: CTTGGGCTCACTGAGGACCAAGGCCTTGTGGTGGTT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGCCTTGGTGTGGGCCTaGCTGGCATCAACCACCACA +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQALVWA*LASTTT
Trigger: TGTGGTGGTTGATGCCAGCAAGGCCCACACCAAGGC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAAGCGACTCTCCATACTaGATCTCAGGGGGACCCATG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSDSPY*ISGGPM
Trigger: CATGGGTCCCCCTGAGATCAAGTATGGAGAGTCGCT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACGTACAGCCACACCATaGCACACACAGAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGRTATP*HTQSEH
Trigger: GTGCTCACTCTGTGTGTGCAATGGTGTGGCTGTACG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGTGATGAGGTCCTGGTaGGAGCGTACAGCCACACCA +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEVMRSW*ERTATP
Trigger: TGGTGTGGCTGTACGCTCCAACCAGGACCTCATCAC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCGGGGCCAAGAGGTGTaGTCCCGGAGAAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARRGQEV*SRRSHW
Trigger: CCAGTGACTTCTCCGGGACAACACCTCTTGGCCCCG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAATACTCTTTGATGGGTaGGAGATGGAGCCGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGILFDG*EMEPLP
Trigger: CGGGAGCGGCTCCATCTCCAACCCATCAAAGAGTAT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCCGGGTGTCCCCTCCTaGGCAGTTCCATCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAPGVPS*AVPSLP
Trigger: GGGCAAGGATGGAACTGCCAAGGAGGGGACACCCGG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCGGAGTGGAAGGTGGTaGGGTCATCATGGCAACCTT +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRRSGRW*GHHGNL
Trigger: AAGGTTGCCATGATGACCCAACCACCTTCCACTCCG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCTGTGGACATTGCCTaGTTCATCTCCCATGGTCAC +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVAVDIA*FISHGH
Trigger: GTGACCATGGGAGATGAACAAGGCAATGTCCACAGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGGAAGCGGATCTCCTTaGACTCGCCGCCCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARGSGSP*TRRPQG
Trigger: TCCTTGGGGGCGGCGAGTCAAAGGAGATCCGCTTCC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACCAGCTTGTCACCATCTaGGGGAAGCGGATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHQLVTI*GKRISF
Trigger: AAAGGAGATCCGCTTCCCCAAGATGGTGACAAGCTG...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTCCACGCTCTCACCGTaGACAAAGACAGCAAAACGC +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRSTLSP*TKTAKR
Trigger: GCGTTTTGCTGTCTTTGTCAACGGTGAGAGCGTGGA...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAAGAGTGGCGCGCACTaGGTGATGAGCGGCAGCACA +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQKSGAH*VMSGST
Trigger: TGTGCTGCCGCTCATCACCAAGTGCGCGCCACTCTT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATGCCCCAGAAGAGCTaGCGTGTGAGGTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRMPQKS*RVRCSS
Trigger: AGAGCTGCACCTCACACGCAAGCTCTTCTGGGGCAT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGTAATTTTCTGCCAGTaGTTCGGCCATGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRVIFCQ*FGHGLQ
Trigger: CTGCAGGCCATGGCCGAACAACTGGCAGAAAATTAC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGCCTCTCGAAGGCATaGAGGTCCAGGACGCTGCAC +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQCLSKA*RSRTLH
Trigger: GTGCAGCGTCCTGGACCTCAATGCCTTCGAGAGGCA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCTCCTTCTCCCGCTaGAAGATGACAAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESSFSR*KMTRGT
Trigger: GGTGCCCCTTGTCATCTTCAAGCGGGAGAAGGAGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCAGGTTTGCGCTCATaGTGGGCTGTGATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSGLRS*WAVISR
Trigger: TCTGGAGATCACAGCCCACAATGAGCGCAAACCTGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGATGGTGCGGAGCGTCTaGACTCCCATGGCGATGTCC +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQMVRSV*TPMAMS
Trigger: GGACATCGCCATGGGAGTCAAGACGCTCCGCACCAT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATTCCTTCACTTGCTCTaGTTGGTCTCGGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGFLHLL*LVSELP
Trigger: GGGGAGCTCCGAGACCAACAAGAGCAAGTGAAGGAA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCCACAGATGAAGCACTaGGTCTCCATGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWPQMKH*VSMSSF
Trigger: GAAGGAAGACATGGAGACCAAGTGCTTCATCTGTGG...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTGGTCCTCATACTGCTaGCGGAAACAGTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHWSSYC*RKQSPA
Trigger: TGCTGGAGACTGTTTCCGCAAGCAGTATGAGGACCA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp GATCATAAGGTTCTCCTCCTGGGGACCCATCTGCACAATGAGCAGTaGGCGGATCTGGCCCAGGCACTCCAGCAGGCTCATGGTATCCTC +
Preference number: 5 (lower is better)
Translates to: DHKVLLLGTHLHNEQ*ADLAQALQQAHGIL
Trigger: GAGGATACCATGAGCCTGCTGGAGTGCCTGGGCCAGATCCGCTCACTGCTCATTGTGCAGATGGGTCCCCAGGAGGAGAACCTTATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp GGAGCCACCTCATCCACCATCACCTCAAAGTACCATTTGCCATACTaGGTGGAGCCCTCTGCTCGGCCCACAAAGATGTTGGGGCGGATG +
Preference number: 5 (lower is better)
Translates to: GATSSTITSKYHLPY*VEPSARPTKMLGRM
Trigger: CATCCGCCCCAACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGGTGATGGTGGATGAGGTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CCACCTCATCCACCATCACCTCAAAGTACCATTTGCCATACTGCGTaGAGCCCTCTGCTCGGCCCACAAAGATGTTGGGGCGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: PPHPPSPQSTICHTA*SPLLGPQRCWGGCW
Trigger: CCAGCATCCGCCCCAACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGGTGATGGTGGATGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp TTCCAACAAGCTCATGAGGCGGCTTCCCAGAGTGCTCTCCTCCTCTaGCTCCTCCTCCTCTCCCTCCAACTGGATTCCACAATGTGCCAG +
Preference number: 5 (lower is better)
Translates to: FQQAHEAASQSALLL*LLLLSLQLDSTMCQ
Trigger: CTGGCACATTGTGGAATCCAGTTGGAGGGAGAGGAGGAGGAGCCAGAGGAGGAGAGCACTCTGGGAAGCCGCCTCATGAGCTTGTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAACTTCAGCTGTTCCTaGAGCACCGTGGCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQNFSCS*STVALH
Trigger: GTGCAGCGCCACGGTGCTCAAGGAACAGCTGAAGTT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGTACATTCTGCGCGTaGCTGGTGGGTTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEGTFCA*LVGSRK
Trigger: CTTTCTGGAACCCACCAGCAACGCGCAGAATGTACC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCGACTCTCCATACTaGATCTCAGGGGGACCCATG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESDSPY*ISGGPM
Trigger: CATGGGTCCCCCTGAGATCAAGTATGGAGAGTCGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACGCAGGCTGCGCAGCTaGGTCTGCTTCTCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGRRLRS*VCFSSC
Trigger: GCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGCG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCCAGCCAATCCAAGTTaGTGGAGAAGAGCGCACAGT +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRPANPS*WRRAHS
Trigger: ACTGTGCGCTCTTCTCCACAAACTTGGATTGGCTGG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCCAGACGATCCAGCTaGCTGACCAGCCAATCCAAG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESRRSS*LTSQSK
Trigger: CTTGGATTGGCTGGTCAGCAAGCTGGATCGTCTGGA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGAAGAGCCCATCGAGGTaGAAGGATTCAAAGACACCC +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVKSPSR*KDSKTP
Trigger: GGGTGTCTTTGAATCCTTCAACCTCGATGGGCTCTT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACAAGAGCCCATCGAGGTaGAAGGATTCAAAGACACCC +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHKSPSR*KDSKTP
Trigger: GGGTGTCTTTGAATCCTTCAACCTCGATGGGCTCTT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGGGTGCAGCCTCTTGTaGTCATCCCGTACCGGACCA +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARGCSLL*SSRTGP
Trigger: TGGTCCGGTACGGGATGACAACAAGAGGCTGCACCC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTCCAGAGGAGCCGGCTaGTATCCATTGCTCATCATA +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVSRGAG*YPLLII
Trigger: TATGATGAGCAATGGATACAAGCCGGCTCCTCTGGA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACTGTAGCTCCAGCCTaGTGCCACGCGGTCTCTCGC +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRTVAPA*CHAVSR
Trigger: GCGAGAGACCGCGTGGCACAAGGCTGGAGCTACAGT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGTCTCAGCTCAGGCCTaGCCCAGCCCACTCGCATCT +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAVSAQA*PSPLAS
Trigger: AGATGCGAGTGGGCTGGGCAAGGCCTGAGCTGAGAC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGATCATGGCAACCTTCTaGGCCTTGAACAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWIMATF*ALNKNP
Trigger: AGGGTTCTTGTTCAAGGCCAAGAAGGTTGCCATGAT...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGTCACCGCCCTGACTTaGCTGAGGTCGAAGCTCATG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQVTALT*LRSKLM
Trigger: CATGAGCTTCGACCTCAGCAAAGTCAGGGCGGTGAC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGCGCTCTCATCAGGTTaGGGTGTTGGTAGAAGACTT +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVALSSG*GVGRRL
Trigger: AAGTCTTCTACCAACACCCAAACCTGATGAGAGCGC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGGCGCTCTCATCAGGTTaGGGTGTTGGTAGAAGACTT +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRALSSG*GVGRRL
Trigger: AAGTCTTCTACCAACACCCAAACCTGATGAGAGCGC...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCACCATGGATGCCTaGTGGTCAGGCACGAAGGAT +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESTMDA*WSGTKD
Trigger: ATCCTTCGTGCCTGACCACAAGGCATCCATGGTGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCACCATGGATGCCTaGTGGTCAGGCACGAAGGAT +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRSTMDA*WSGTKD
Trigger: ATCCTTCGTGCCTGACCACAAGGCATCCATGGTGCT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACAGCTTGAGTGGCATCTaGGCGAACTCATTGAGGATG +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHSLSGI*ANSLRM
Trigger: CATCCTCAATGAGTTCGCCAAGATGCCACTCAAGCT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATGGTTGGTAAGGAGCTaGAGTGGCATCTTGGCGAAC +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGWLVRS*SGILAN
Trigger: GTTCGCCAAGATGCCACTCAAGCTCCTTACCAACCA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAATTTCCTTCTCCTTGTaGGAGGCATGGCCACCACTG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGISFSL*EAWPPL
Trigger: CAGTGGTGGCCATGCCTCCAACAAGGAGAAGGAAAT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTTCCCCAGGAGGGAATaGAGGTGGTCGGAGGTGACC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARFPRRE*RWSEVT
Trigger: GGTCACCTCCGACCACCTCAATTCCCTCCTGGGGAA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCCTCAGCTTCTGCCTaGGCTTCCAGGCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASSASA*ASRRSC
Trigger: GCAGCTGCGCCTGGAAGCCAAGGCAGAAGCTGAGGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGATCGGCAACATCTTCTaGAGTGTGGCCACGATCAAG +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVIGNIF*SVATIK
Trigger: CTTGATCGTGGCCACACTCAAGAAGATGTTGCCGAT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGCCCTCCGGCGCTGCTaGGACAGAAGTTTATGCCAC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARALRRC*DRSLCH
Trigger: GTGGCATAAACTTCTGTCCAAGCAGCGCCGGAGGGC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCCGGTTGTGCAGCCTaGACTGCTGGTACAGGAGCC +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRPGCAA*TAGTGA
Trigger: GGCTCCTGTACCAGCAGTCAAGGCTGCACAACCGGG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGTTTTGGAAATCATTGTaGTGCCCCTCGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVFWKSL*CPSQSS
Trigger: GCTGCTCTGCGAGGGGCACAACAATGATTTCCAAAA...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGACATGCTCTGACAGGTaGGTAAGCAGCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQTCSDR*VSSTAT
Trigger: CGTGGCGGTGCTGCTTACCAACCTGTCAGAGCATGT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCAGGTTTGCGCTCATaGTGGGCTGTGATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSGLRS*WAVISR
Trigger: TCTGGAGATCACAGCCCACAATGAGCGCAAACCTGA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCATGGTGCGGAGCGTCTaGACTCCCATGGCGATGTCC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARMVRSV*TPMAMS
Trigger: GGACATCGCCATGGGAGTCAAGACGCTCCGCACCAT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATTCCTTCACTTGCTCTaGTTGGTCTCGGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEFLHLL*LVSELP
Trigger: GGGGAGCTCCGAGACCAACAAGAGCAAGTGAAGGAA...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCAAACCCATGTGGGGTaGTGTCGAAGTAGTCACTGC +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRQTHVG*CRSSHC
Trigger: GCAGTGACTACTTCGACACAACCCCACATGGGTTTG...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp ACACCTCCAGGATGCCAGATGAGGCCTCCAGACGATCCAGCTTGCTaGCCAGCCAATCCAAGTTTGTGGAGAAGAGCGCACAGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: TPPGCQMRPPDDPAC*PANPSLWRRAHSWC
Trigger: GCACCAACTGTGCGCTCTTCTCCACAAACTTGGATTGGCTGGTCAGCAAGCTGGATCGTCTGGAGGCCTCATCTGGCATCCTGGAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp TCTCATCTGCCATGCCCACGTGGCAGCCCAGGGCCAGCAGAGTCTTaGGTGTCTCCCCTGACATCTGCAAGTTGTAATTCCGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: SHLPCPRGSPGPAES*VSPLTSASCNSAQV
Trigger: AACCTGAGCGGAATTACAACTTGCAGATGTCAGGGGAGACACTCAAGACTCTGCTGGCCCTGGGCTGCCACGTGGGCATGGCAGATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp TCACCGTTCTGGCATCTAGAGAGCGTGCCAATATGTGAAGACAGTTaGCCACAGCTGGGGCATCCGTCCCAAAGAGGGAGACTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: SPFWHLESVPICEDS*PQLGHPSQRGRLGG
Trigger: GCCACCGAGTCTCCCTCTTTGGGACGGATGCCCCAGCTGTGGTCAACTGTCTTCACATATTGGCACGCTCTCTAGATGCCAGAACGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp GGTCGGTGGGAGCACACATGTTTAGTCCGATCGGCAACATCTTCTTaGGTGTGGCCACGATCAAGGATGTCTGCACGGAGTAGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: GRWEHTCLVRSATSS*VWPRSRMSARSSGP
Trigger: GGGACCGCTACTCCGTGCAGACATCCTTGATCGTGGCCACACTCAAGAAGATGTTGCCGATCGGACTAAACATGTGTGCTCCCACCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TGGGCGATGAACTCCTGGGAGATGTCCATCCAGCGAAGCAGCTGCTaGAGGAAGCCGAAGGCAAATCGCTTCTCAATGGAGGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: WAMNSWEMSIQRSSC*RKPKANRFSMEDVS
Trigger: GGACACATCCTCCATTGAGAAGCGATTTGCCTTCGGCTTCCTGCAGCAGCTGCTTCGCTGGATGGACATCTCCCAGGAGTTCATCGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp AGGTGGGCGATGAACTCCTGGGAGATGTCCATCCAGCGAAGCAGCTaGTGCAGGAAGCCGAAGGCAAATCGCTTCTCAATGGAGGATGTG +
Preference number: 5 (lower is better)
Translates to: RWAMNSWEMSIQRSS*CRKPKANRFSMEDV
Trigger: CACATCCTCCATTGAGAAGCGATTTGCCTTCGGCTTCCTGCAGCAGCTGCTTCGCTGGATGGACATCTCCCAGGAGTTCATCGCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp ACCACATCTCGAGGGAGTCGGGGAAGAGCCGGAGTGGAAGGTGGTTaGGTCATCATGGCAACCTTCTTGGCCTTGAACAAGAACCCTCTC +
Preference number: 5 (lower is better)
Translates to: TTSRGSRGRAGVEGG*VIMATFLALNKNPL
Trigger: GAGAGGGTTCTTGTTCAAGGCCAAGAAGGTTGCCATGATGACCCAACCACCTTCCACTCCGGCTCTTCCCCGACTCCCTCGAGATGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp AGGTACCACATCTCGAGGGAGTCGGGGAAGAGCCGGAGTGGAAGGTaGTTGGGTCATCATGGCAACCTTCTTGGCCTTGAACAAGAACCC +
Preference number: 5 (lower is better)
Translates to: RYHISRESGKSRSGR*LGHHGNLLGLEQEP
Trigger: GGGTTCTTGTTCAAGGCCAAGAAGGTTGCCATGATGACCCAACCACCTTCCACTCCGGCTCTTCCCCGACTCCCTCGAGATGTGGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCCCTCCACATCTCTCTaGGGGGCCACATCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRPSTSL*GATSSF
Trigger: GAAGCTGGATGTGGCCCCCAAGAGAGATGTGGAGGG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGACCAGCCAATCCAAGTTaGTGGAGAAGAGCGCACAGT +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRPANPS*WRRAHS
Trigger: ACTGTGCGCTCTTCTCCACAAACTTGGATTGGCTGG...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCGTACAGCCACACCATaGCACACACAGAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQRTATP*HTQSEH
Trigger: GTGCTCACTCTGTGTGTGCAATGGTGTGGCTGTACG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGTGATGAGGTCCTGGTaGGAGCGTACAGCCACACCA +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARVMRSW*ERTATP
Trigger: TGGTGTGGCTGTACGCTCCAACCAGGACCTCATCAC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAAGAGCCCATCGAGGTaGAAGGATTCAAAGACACCC +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWKSPSR*KDSKTP
Trigger: GGGTGTCTTTGAATCCTTCAACCTCGATGGGCTCTT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACAGAGGCTGTCCCTATaGCTGCGCTTGGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGQRLSL*LRLVAS
Trigger: CGAGGCCACCAAGCGCAGCAATAGGGACAGCCTCTG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGTCTCAGCTCAGGCCTaGCCCAGCCCACTCGCATCT +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGVSAQA*PSPLAS
Trigger: AGATGCGAGTGGGCTGGGCAAGGCCTGAGCTGAGAC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAATGAGGACCTCGCCATaGAGGGTGAAGATGATGGTG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEMRTSP*RVKMMV
Trigger: CACCATCATCTTCACCCTCAATGGCGAGGTCCTCAT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAAAGAACCCTCTCTTCTaGTTCTTCTCGGTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGKNPLF*FFSVVA
Trigger: CGCTACCACCGAGAAGAACAAGAAGAGAGGGTTCTT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGATCATGGCAACCTTCTaGGCCTTGAACAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRIMATF*ALNKNP
Trigger: AGGGTTCTTGTTCAAGGCCAAGAAGGTTGCCATGAT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCTGTGGACATTGCCTaGTTCATCTCCCATGGTCAC +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEAVDIA*FISHGH
Trigger: GTGACCATGGGAGATGAACAAGGCAATGTCCACAGC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGACCTGGAAGAAGGTGTaGCTTTCTTTCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRTWKKV*LSFPLA
Trigger: AGCCAATGGGAAAGAAAGCAACACCTTCTTCCAGGT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGGAAGCGGATCTCCTTaGACTCGCCGCCCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGGSGSP*TRRPQG
Trigger: TCCTTGGGGGCGGCGAGTCAAAGGAGATCCGCTTCC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGCCAAGGCTAGCTCGTaGTTGTCAATGACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGAKASS*LSMTEA
Trigger: TGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGC...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGATCTTGGCGAACTCATaGAGGATGGGCACATCGAAC +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRILANS*RMGTSN
Trigger: GTTCGATGTGCCCATCCTCAATGAGTTCGCCAAGAT...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGTGGTTGGTGAAGTATaGGTTGATCAAAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVVVGEV*VDQRQQ
Trigger: CTGCTGCCTTTGATCAACCAATACTTCACCAACCAC...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAATTTCCTTCTCCTTGTaGGAGGCATGGCCACCACTG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEISFSL*EAWPPL
Trigger: CAGTGGTGGCCATGCCTCCAACAAGGAGAAGGAAAT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCATTTCCTTCTCCTaGTTGGAGGCATGGCCACCA +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWIISFS*LEAWPP
Trigger: TGGTGGCCATGCCTCCAACAAGGAGAAGGAAATGAT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCGGCAACATCTTCTaGAGTGTGGCCACGATCAAG +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWIGNIF*SVATIK
Trigger: CTTGATCGTGGCCACACTCAAGAAGATGTTGCCGAT...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACCCGGTTGTGCAGCCTaGACTGCTGGTACAGGAGCC +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGPGCAA*TAGTGA
Trigger: GGCTCCTGTACCAGCAGTCAAGGCTGCACAACCGGG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTGCCTCTCGAAGGCATaGAGGTCCAGGACGCTGCAC +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGACLSKA*RSRTLH
Trigger: GTGCAGCGTCCTGGACCTCAATGCCTTCGAGAGGCA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTTCCTTCACTTGCTCTaGTTGGTCTCGGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQFLHLL*LVSELP
Trigger: GGGGAGCTCCGAGACCAACAAGAGCAAGTGAAGGAA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACATGTCTTCCTTCACTaGCTCTTGTTGGTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGHVFLH*LLLVSE
Trigger: CTCCGAGACCAACAAGAGCAAGTGAAGGAAGACATG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGCATGTCTTCCTTCACTaGCTCTTGTTGGTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWHVFLH*LLLVSE
Trigger: CTCCGAGACCAACAAGAGCAAGTGAAGGAAGACATG...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGACCACAGATGAAGCACTaGGTCTCCATGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGPQMKH*VSMSSF
Trigger: GAAGGAAGACATGGAGACCAAGTGCTTCATCTGTGG...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp CCTCATCTGTATCTTTCAGGGCATAGCGGGCTTTGGCCAGCACAATaGGGTCCTGGTCGGTGGGAGCACACATGTTTAGTCCGATCGGCA +
Preference number: 5 (lower is better)
Translates to: PHLYLSGHSGLWPAQ*GPGRWEHTCLVRSA
Trigger: TGCCGATCGGACTAAACATGTGTGCTCCCACCGACCAGGACCTCATTGTGCTGGCCAAAGCCCGCTATGCCCTGAAAGATACAGATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp CGCGTCCAAACATGTTCATCATGGGTACTTGGCACGGGAGTCTTCTaGGCCAGCTTCATCATCATGTGCGCGAACACGTGCAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: RVQTCSSWVLGTGVF*ASFIIMCANTCRKP
Trigger: GGGCTTCCTGCACGTGTTCGCGCACATGATGATGAAGCTGGCTCAGAAGACTCCCGTGCCAAGTACCCATGATGAACATGTTTGGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS GCA 90 bp CATCATATACGTCTTAGGCAGCTTCGTCTTCTTCAGGTTGTCTTCTaGCTTCTCATCTGCCATGCCCACGTGGCAGCCCAGGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HHIRLRQLRLLQVVF*LLICHAHVAAQGQQ
Trigger: CTGCTGGCCCTGGGCTGCCACGTGGGCATGGCAGATGAGAAGGCAGAAGACAACCTGAAGAAGACGAAGCTGCCTAAGACGTATATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp TGTTCTTCTGCTTCCCCAGCTCAAACTGGACCACGTTCTGGTGGGTaGGCAGCACGAAGACAGCAGGAAACAGCTTCGTGTTGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: CSSASPAQTGPRSGG*AARRQQETASCWVP
Trigger: TGGAACCCAACACGAAGCTGTTTCCTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAAGCAGAAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp GGCATGATGTTCTTCTGCTTCCCCAGCTCAAACTGGACCACGTTCTaGTGGGTGGGCAGCACGAAGACAGCAGGAAACAGCTTCGTGTTG +
Preference number: 5 (lower is better)
Translates to: GMMFFCFPSSNWTTF*WVGSTKTAGNSFVL
Trigger: CAACACGAAGCTGTTTCCTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAAGCAGAAGAACATCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAACTTCAGCTGTTCCTaGAGCACCGTGGCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGANFSCS*STVALH
Trigger: GTGCAGCGCCACGGTGCTCAAGGAACAGCTGAAGTT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGTGATGAGGTCCTGGTaGGAGCGTACAGCCACACCA +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRVMRSW*ERTATP
Trigger: TGGTGTGGCTGTACGCTCCAACCAGGACCTCATCAC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCATACTCTTTGATGGGTaGGAGATGGAGCCGCTCCCG +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARILFDG*EMEPLP
Trigger: CGGGAGCGGCTCCATCTCCAACCCATCAAAGAGTAT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACGCCGGCTTGTATCCATaGCTCATCATATACGTCTTA +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHAGLYP*LIIYVL
Trigger: TAAGACGTATATGATGAGCAATGGATACAAGCCGGC...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATCCAGAGGAGCCGGCTaGTATCCATTGCTCATCATA +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRSRGAG*YPLLII
Trigger: TATGATGAGCAATGGATACAAGCCGGCTCCTCTGGA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGAACCCTCTCTTCTaGTTCTTCTCGGTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRKNPLF*FFSVVA
Trigger: CGCTACCACCGAGAAGAACAAGAAGAGAGGGTTCTT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGTCACCGCCCTGACTTaGCTGAGGTCGAAGCTCATG +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRVTALT*LRSKLM
Trigger: CATGAGCTTCGACCTCAGCAAAGTCAGGGCGGTGAC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGTGCAATAGCATGTaGATCTGCTCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRKCNSM*ICSWGG
Trigger: TCCACCCCAGGAGCAGATCAACATGCTATTGCACTT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGCGCTCTCATCAGGTTaGGGTGTTGGTAGAAGACTT +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEALSSG*GVGRRL
Trigger: AAGTCTTCTACCAACACCCAAACCTGATGAGAGCGC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCAGCTTGTCACCATCTaGGGGAAGCGGATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQQLVTI*GKRISF
Trigger: AAAGGAGATCCGCTTCCCCAAGATGGTGACAAGCTG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAAAGGCTAGCTCGTTGTaGTCAATGACAGAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGKASSL*SMTEAA
Trigger: TGCTGCTTCTGTCATTGACAACAACGAGCTAGCCTT...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGCCAAGGCTAGCTCGTaGTTGTCAATGACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRAKASS*LSMTEA
Trigger: TGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAAGAGTGGCGCGCACTaGGTGATGAGCGGCAGCACA +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGKSGAH*VMSGST
Trigger: TGTGCTGCCGCTCATCACCAAGTGCGCGCCACTCTT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAATCTTGGCGAACTCATaGAGGATGGGCACATCGAAC +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRILANS*RMGTSN
Trigger: GTTCGATGTGCCCATCCTCAATGAGTTCGCCAAGAT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAATCTTGGCGAACTCATaGAGGATGGGCACATCGAAC +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEILANS*RMGTSN
Trigger: GTTCGATGTGCCCATCCTCAATGAGTTCGCCAAGAT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAAGCTTGAGTGGCATCTaGGCGAACTCATTGAGGATG +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGESLSGI*ANSLRM
Trigger: CATCCTCAATGAGTTCGCCAAGATGCCACTCAAGCT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGCCCCAGAAGAGCTaGCGTGTGAGGTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRMPQKS*RVRCSS
Trigger: AGAGCTGCACCTCACACGCAAGCTCTTCTGGGGCAT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGTAATTTTCTGCCAGTaGTTCGGCCATGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQVIFCQ*FGHGLQ
Trigger: CTGCAGGCCATGGCCGAACAACTGGCAGAAAATTAC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGTGGTTGGTGAAGTATaGGTTGATCAAAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWVVGEV*VDQRQQ
Trigger: CTGCTGCCTTTGATCAACCAATACTTCACCAACCAC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGATTTCCTTCTCCTTGTaGGAGGCATGGCCACCACTG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQISFSL*EAWPPL
Trigger: CAGTGGTGGCCATGCCTCCAACAAGGAGAAGGAAAT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAATCATTTCCTTCTCCTaGTTGGAGGCATGGCCACCA +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEIISFS*LEAWPP
Trigger: TGGTGGCCATGCCTCCAACAAGGAGAAGGAAATGAT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATTCCCCAGGAGGGAATaGAGGTGGTCGGAGGTGACC +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGFPRRE*RWSEVT
Trigger: GGTCACCTCCGACCACCTCAATTCCCTCCTGGGGAA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAACAGCTCCTCTGCATaGGGGTTGGGCTCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGANSSSA*GLGSVS
Trigger: GCTGACAGAGCCCAACCCCAATGCAGAGGAGCTGTT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATTTTGGAAATCATTGTaGTGCCCCTCGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRFWKSL*CPSQSS
Trigger: GCTGCTCTGCGAGGGGCACAACAATGATTTCCAAAA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAGAGGCTGTTGAACACTaGTTTAGCTACCGACATGGC +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWREAVEH*FSYRHG
Trigger: GCCATGTCGGTAGCTAAACAAGTGTTCAACAGCCTC...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGAATCATCTCCACATaGGACGAAGACTCCACGAGC +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRRIIST*DEDSTS
Trigger: GCTCGTGGAGTCTTCGTCCAATGTGGAGATGATTCT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGGGCAAACTCTTCGCAGTaGATCATCTCATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: SVPSCLGRSSQWRRHLRWANSSQ*IISFSS
Trigger: AGATGAGAATGAGATGATCAACTGCGAAGAGTTTGC...CCACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTACATGCTCTGACAGGTaGGTAAGCAGCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGATCSDR*VSSTAT
Trigger: CGTGGCGGTGCTGCTTACCAACCTGTCAGAGCATGT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACAGCTTCCTCCTTCTTaGGAGGGGGTGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGQLPPS*EGVEVV
Trigger: CACCACCTCCACCCCCTCCAAAGAAGGAGGAAGCTG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGAACAGTAAGATGAAGTaGATGGCAAAGGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRNSKMK*MAKARK
Trigger: CTTCCTGGCCTTTGCCATCAACTTCATCTTACTGTT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTCAGGTTTGCGCTCATaGTGGGCTGTGATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQSGLRS*WAVISR
Trigger: TCTGGAGATCACAGCCCACAATGAGCGCAAACCTGA...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp CCCGATTTCATCACCGTTCTGGCATCTAGAGAGCGTGCCAATATGTaGAGACAGTTGACCACAGCTGGGGCATCCGTCCCAAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PDFITVLASRERANM*RQLTTAGASVPKRE
Trigger: CTCCCTCTTTGGGACGGATGCCCCAGCTGTGGTCAACTGTCTTCACATATTGGCACGCTCTCTAGATGCCAGAACGGTGATGAAATCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp GCCTGGGACGCCGCGGTACAGTGCCATTTGCCAGCGAAGAGATGGTaGGCCTTCCACCTTTCCCTGAAGGTTAAGGTTGTTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: AWDAAVQCHLPAKRW*AFHLSLKVKVVLKE
Trigger: TTCCTTCAAAACAACCTTAACCTTCAGGGAAAGGTGGAAGGCTCACCATCTCTTCGCTGGCAAATGGCACTGTACCGCGGCGTCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp CTTCGCCATTTTCCCCGCCCTCCTCCAGGTGGCAGCTCTTTGCCATaGTGTCAGCGTAAGCCATGTATAGGTAGTCTTCGTCCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: LRHFPRPPPGGSSLP*CQRKPCIGSLRPVC
Trigger: GCAAACTGGACGAAGACTACCTATACATGGCTTACGCTGACATCATGGCAAAGAGCTGCCACCTGGAGGAGGGCGGGGAAAATGGCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CCTTCTTCACAGCCAGAGCAGATGGGATTCATGTTCCACAGAGTCTaGATAAAGGAGGCGTCAACCTGGAGCTCCCCACTTGCGGTTGAC +
Preference number: 5 (lower is better)
Translates to: PSSQPEQMGFMFHRV*IKEASTWSSPLAVD
Trigger: GTCAACCGCAAGTGGGGAGCTCCAGGTTGACGCCTCCTTTATGCAGACTCTGTGGAACATGAATCCCATCTGCTCTGGCTGTGAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CACCATCACCTCAAAGTACCATTTGCCATACTGCGTGGAGCCCTCTaGTCGGCCCACAAAGATGTTGGGGCGGATGCTGGTGACATAGTT +
Preference number: 5 (lower is better)
Translates to: HHHLKVPFAILRGAL*SAHKDVGADAGDIV
Trigger: AACTATGTCACCAGCATCCGCCCCAACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGGTGATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp ATGGGATTCATGTTCCACAGAGTCTGCATAAAGGAGGCGTCAACCTaGAGCTCCCCACTTGCGGTTGACAGGTGCAGGTATCGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: MGFMFHRVCIKEAST*SSPLAVDRCRYRSE
Trigger: CTCTGAGCGATACCTGCACCTGTCAACCGCAAGTGGGGAGCTCCAGGTTGACGCCTCCTTTATGCAGACTCTGTGGAACATGAATCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp AGCTTCTCCTTGGAGATTCGGAAGCAAAAGGAAGTAGCCTTGGTGTaGGCCTTGCTGGCATCAACCACCACAAGGCCTTGGTCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SFSLEIRKQKEVALV*ALLASTTTRPWSSV
Trigger: CACTGAGGACCAAGGCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACCAAGGCTACTTCCTTTTGCTTCCGAATCTCCAAGGAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp ATGATGTTCTTCTGCTTCCCCAGCTCAAACTGGACCACGTTCTGGTaGGTGGGCAGCACGAAGACAGCAGGAAACAGCTTCGTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: MMFFCFPSSNWTTFW*VGSTKTAGNSFVLG
Trigger: ACCCAACACGAAGCTGTTTCCTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAAGCAGAAGAACATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp TCATCAGCACCATTTTTGAAGTGCAATAGCATGTTGATCTGCTCCTaGGGTGGAGAACGGAACTCTCGGGTGCGCCTTGCGGTCTCGGCT +
Preference number: 5 (lower is better)
Translates to: SSAPFLKCNSMLICS*GGERNSRVRLAVSA
Trigger: AGCCGAGACCGCAAGGCGCACCCGAGAGTTCCGTTCTCCACCCCAGGAGCAGATCAACATGCTATTGCACTTCAAAAATGGTGCTGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAAACTTCAGCTGTTCCTaGAGCACCGTGGCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGNFSCS*STVALH
Trigger: GTGCAGCGCCACGGTGCTCAAGGAACAGCTGAAGTT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCACGTCAAAGGCCAACTaGTCAGTCATGGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARTSKAN*SVMDRE
Trigger: CTCCCGATCCATGACTGACAAGTTGGCCTTTGACGT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACATCCAGCTTCTCCTaGGAGATTCGGAAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRTSSFS*EIRKQK
Trigger: CTTTTGCTTCCGAATCTCCAAGGAGAAGCTGGATGT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCCAGACGATCCAGCTaGCTGACCAGCCAATCCAAG +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASRRSS*LTSQSK
Trigger: CTTGGATTGGCTGGTCAGCAAGCTGGATCGTCTGGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGTACAGCCACACCATaGCACACACAGAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGARTATP*HTQSEH
Trigger: GTGCTCACTCTGTGTGTGCAATGGTGTGGCTGTACG...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATGCACGGGGCAGCCGTaGATACGAAAGGAGATGGAC +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGCTGQP*IRKEMD
Trigger: GTCCATCTCCTTTCGTATCAACGGCTGCCCCGTGCA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAACCTGGAAGAAGGTGTaGCTTTCTTTCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRTWKKV*LSFPLA
Trigger: AGCCAATGGGAAAGAAAGCAACACCTTCTTCCAGGT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAACCTGTAGGAAGTGGTaGGGCATTCGGCTCCACGAG +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGTCRKW*GIRLHE
Trigger: CTCGTGGAGCCGAATGCCCAACCACTTCCTACAGGT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGCCAAGGCTAGCTCGTaGTTGTCAATGACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQAKASS*LSMTEA
Trigger: TGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTCCACGCTCTCACCGTaGACAAAGACAGCAAAACGC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSTLSP*TKTAKR
Trigger: GCGTTTTGCTGTCTTTGTCAACGGTGAGAGCGTGGA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAGCACCATGGATGCCTaGTGGTCAGGCACGAAGGAT +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASTMDA*WSGTKD
Trigger: ATCCTTCGTGCCTGACCACAAGGCATCCATGGTGCT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGTGTACTCTGCGAACTaGTTAATGAAGGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEVYSAN*LMKESS
Trigger: GCTGGACTCCTTCATTAACAAGTTCGCAGAGTACAC...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGGTGAAGTATTGGTaGATCAAAGGCAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHLVKYW*IKGSRI
Trigger: GATTCTGCTGCCTTTGATCAACCAATACTTCACCAA...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATCCTCTGCATTGGGGTaGGGCTCTGTCAGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSSALG*GSVSQC
Trigger: ACACTGGCTGACAGAGCCCAACCCCAATGCAGAGGA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATCCTCTGCATTGGGGTaGGGCTCTGTCAGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSSALG*GSVSQC
Trigger: ACACTGGCTGACAGAGCCCAACCCCAATGCAGAGGA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGGTGCAGATAATGATATaGATGGTGGTCGTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SSGSSVPSCLGRSSQWRRVQIMI*MVVVFP
Trigger: TGGGAACACGACCACCATCAATATCATTATCTGCAC...CCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACAGATACAGGAAAGAGTaGTCTGTGAAGATGACTCCA +
Preference number: 5 (lower is better)
Translates to: SGSSVPSCLGRSSQWRRHRYRKE*SVKMTP
Trigger: TGGAGTCATCTTCACAGACAACTCTTTCCTGTATCT...GTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGTGAGATACAGGAAAGAGTaGTCTGTGAAGATGACTCCA +
Preference number: 5 (lower is better)
Translates to: ICPQLPGEELAVEKALEVRYRKE*SVKMTP
Trigger: TGGAGTCATCTTCACAGACAACTCTTTCCTGTATCT...CACCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCATGTCTTCCTTCACTaGCTCTTGTTGGTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQHVFLH*LLLVSE
Trigger: CTCCGAGACCAACAAGAGCAAGTGAAGGAAGACATG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCAAACCCATGTGGGGTaGTGTCGAAGTAGTCACTGC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARQTHVG*CRSSHC
Trigger: GCAGTGACTACTTCGACACAACCCCACATGGGTTTG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGCCTGCCTTGGCCATTTaGCTCTTATTGTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQPALAI*LLLSAV
Trigger: GACAGCTGACAATAAGAGCAAAATGGCCAAGGCAGG...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp TCTCCTCTGTCTTCTTCACCAGCTTTACTTTTTCCAACAAGCTCATaGGGCGGCTTCCCAGAGTGCTCTCCTCCTCTGGCTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SPLSSSPALLFPTSS*GGFPECSPPLAPPP
Trigger: AGGAGGAGGAGCCAGAGGAGGAGAGCACTCTGGGAAGCCGCCTCATGAGCTTGTTGGAAAAAGTAAAGCTGGTGAAGAAGACAGAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp CCAGGTCTTGCTCTTGTAATGCCAAGGCTAGCTCGTTGTTGTCAATaGCAGAAGCAGCAGCTACATCCAAGGGTGTGGAGCCCTGCATGC +
Preference number: 5 (lower is better)
Translates to: PGLALVMPRLARCCQ*QKQQLHPRVWSPAC
Trigger: GCATGCAGGGCTCCACACCCTTGGATGTAGCTGCTGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGCATTACAAGAGCAAGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TCAGAAATGGAGCCACCTCATCCACCATCACCTCAAAGTACCATTTaGCATACTGCGTGGAGCCCTCTGCTCGGCCCACAAAGATGTTGG +
Preference number: 5 (lower is better)
Translates to: SEMEPPHPPSPQSTI*HTAWSPLLGPQRCW
Trigger: CCAACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGGTGATGGTGGATGAGGTGGCTCCATTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CTTGGACTTGTAAGGATGCTCCGTCTGGTCCAGGTGATAGAGCACTaGGGACACTTCCTGAACTCTGCGCACGATTTTCTCGGGATCATC +
Preference number: 5 (lower is better)
Translates to: LGLVRMLRLVQVIEH*GHFLNSAHDFLGII
Trigger: GATGATCCCGAGAAAATCGTGCGCAGAGTTCAGGAAGTGTCCGCAGTGCTCTATCACCTGGACCAGACGGAGCATCCTTACAAGTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CCTCCTCTTCTTCCTGCTCTCCAGCTTTCGATAGGTCATCTATCATaGGGTCCTCGAAACTGTGGTCCTCAGTCAGGATCCAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: PPLLPALQLSIGHLS*GPRNCGPQSGSRRL
Trigger: AAGCCTCCTGGATCCTGACTGAGGACCACAGTTTCGAGGACCGCATGATAGATGACCTATCGAAAGCTGGAGAGCAGGAAGAAGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTACGTCAAAGGCCAACTaGTCAGTCATGGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGATSKAN*SVMDRE
Trigger: CTCCCGATCCATGACTGACAAGTTGGCCTTTGACGT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATCCAGACGATCCAGCTaGCTGACCAGCCAATCCAAG +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGSRRSS*LTSQSK
Trigger: CTTGGATTGGCTGGTCAGCAAGCTGGATCGTCTGGA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAATACTCTTTGATGGGTaGGAGATGGAGCCGCTCCCG +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGILFDG*EMEPLP
Trigger: CGGGAGCGGCTCCATCTCCAACCCATCAAAGAGTAT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAAGTGCAATAGCATGTaGATCTGCTCCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARKCNSM*ICSWGG
Trigger: TCCACCCCAGGAGCAGATCAACATGCTATTGCACTT...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAGGCACTTGAGGATATGTCTGGGCGGTTaGGGATATCTTTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: SSVPSCLGRSSQWRRHLRICLGG*GYLSCF
Trigger: AAAACAAGAAAGATATCCCAAACCGCCCAGACATAT...CCTCAAGTGCCTTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGTAATTTTCTGCCAGTaGTTCGGCCATGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRVIFCQ*FGHGLQ
Trigger: CTGCAGGCCATGGCCGAACAACTGGCAGAAAATTAC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGTTGGTGAAGTATTGGTaGATCAAAGGCAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWLVKYW*IKGSRI
Trigger: GATTCTGCTGCCTTTGATCAACCAATACTTCACCAA...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCACCCGTTTCTCCTTaGCAGGCACTGATCATCTGC +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGAPVSP*QALIIC
Trigger: GCAGATGATCAGTGCCTGCAAAGGAGAAACGGGTGC...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGAGGCTGTTGAACACTaGTTTAGCTACCGACATGGC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGAREAVEH*FSYRHG
Trigger: GCCATGTCGGTAGCTAAACAAGTGTTCAACAGCCTC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGGCAAACTCTTCGCAGTaGATCATCTCATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: WSSSGSSVPSCLGRSSQWANSSQ*IISFSS
Trigger: AGATGAGAATGAGATGATCAACTGCGAAGAGTTTGC...CCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAACAGTAAGATGAAGTaGATGGCAAAGGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRNSKMK*MAKARK
Trigger: CTTCCTGGCCTTTGCCATCAACTTCATCTTACTGTT...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp CTTCCTCTTCCTCCTCTCCCTCCTCCTCCACCTCTTCTTCCTCCCTaGAGACTTCAGGCTCAATCATCTTCAGGATCTGCTTCACATCCT +
Preference number: 5 (lower is better)
Translates to: LPLPPLPPPPPLLPP*RLQAQSSSGSASHP
Trigger: AGGATGTGAAGCAGATCCTGAAGATGATTGAGCCTGAAGTCTTCAGGGAGGAAGAAGAGGTGGAGGAGGAGGGAGAGGAGGAAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp TCCTCTCCCTCCAACTGGATTCCACAATGTGCCAGCAGGTCTTGGTaGAAGTTGACTAACTCCTGTCGGATCTCTTCAGGGAGAGGACAC +
Preference number: 5 (lower is better)
Translates to: SSPSNWIPQCASRSW*KLTNSCRISSGRGH
Trigger: GTGTCCTCTCCCTGAAGAGATCCGACAGGAGTTAGTCAACTTTCACCAAGACCTGCTGGCACATTGTGGAATCCAGTTGGAGGGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CAGCCCCTCCTCAAGCTCTTCCTTCTCCTCTTCTGCAGCATCCTCTaGCTCTTCTTTTTCCTCATCTTCCTTCTCGTGTGCCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QPLLKLFLLLFCSIL*LFFFLIFLLVCLFF
Trigger: GAAGAAGAGGCACACGAGAAGGAAGATGAGGAAAAAGAAGAGGCAGAGGATGCTGCAGAAGAGGAGAAGGAAGAGCTTGAGGAGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CTTCATCTGCAGCAGCCCCTCCTCAAGCTCTTCCTTCTCCTCTTCTaGAGCATCCTCTGCCTCTTCTTTTTCCTCATCTTCCTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: LHLQQPLLKLFLLLF*SILCLFFFLIFLLV
Trigger: CACGAGAAGGAAGATGAGGAAAAAGAAGAGGCAGAGGATGCTGCAGAAGAGGAGAAGGAAGAGCTTGAGGAGGGGCTGCTGCAGATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp TTATTCATGATGTTCCCAATGCTCTGGATCATAAGGTTCTCCTCCTaGGGACCCATCTGCACAATGAGCAGTGAGCGGATCTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LFMMFPMLWIIRFSS*GPICTMSSERIWPR
Trigger: CCTGGGCCAGATCCGCTCACTGCTCATTGTGCAGATGGGTCCCCAGGAGGAGAACCTTATGATCCAGAGCATTGGGAACATCATGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACCAGCCAATCCAAGTTaGTGGAGAAGAGCGCACAGT +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGPANPS*WRRAHS
Trigger: ACTGTGCGCTCTTCTCCACAAACTTGGATTGGCTGG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGGCCGGCTTGTATCCATaGCTCATCATATACGTCTTA +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQAGLYP*LIIYVL
Trigger: TAAGACGTATATGATGAGCAATGGATACAAGCCGGC...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTTCCAGAGGAGCCGGCTaGTATCCATTGCTCATCATA +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGASRGAG*YPLLII
Trigger: TATGATGAGCAATGGATACAAGCCGGCTCCTCTGGA...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGATCATCAGCACCATTTTaGAAGTGCAATAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: GLVQDHLSPAAWGGARSGSSAPF*KCNSML
Trigger: CAACATGCTATTGCACTTCAAAAATGGTGCTGATGA...TCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACAGCTTGTCACCATCTaGGGGAAGCGGATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGQLVTI*GKRISF
Trigger: AAAGGAGATCCGCTTCCCCAAGATGGTGACAAGCTG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGTGTACTCTGCGAACTaGTTAATGAAGGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARVYSAN*LMKESS
Trigger: GCTGGACTCCTTCATTAACAAGTTCGCAGAGTACAC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTATCGGCAACATCTTCTaGAGTGTGGCCACGATCAAG +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAIGNIF*SVATIK
Trigger: CTTGATCGTGGCCACACTCAAGAAGATGTTGCCGAT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGCTACCGACATGGCTTaGGAGAAGTTTCTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRATDMA*EKFLFP
Trigger: GGGAAAGAGAAACTTCTCCAAAGCCATGTCGGTAGC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGAACAGTAAGATGAAGTaGATGGCAAAGGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQNSKMK*MAKARK
Trigger: CTTCCTGGCCTTTGCCATCAACTTCATCTTACTGTT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACTTCACTTGCTCTTGTaGGTCTCGGAGCTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGLHLLL*VSELPK
Trigger: TTTGGGGAGCTCCGAGACCAACAAGAGCAAGTGAAG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACTTCACTTGCTCTTGTaGGTCTCGGAGCTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGLHLLL*VSELPK
Trigger: TTTGGGGAGCTCCGAGACCAACAAGAGCAAGTGAAG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGATGGTCCTCATACTGCTaGCGGAAACAGTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGWSSYC*RKQSPA
Trigger: TGCTGGAGACTGTTTCCGCAAGCAGTATGAGGACCA...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp CCTCCAACTGGATTCCACAATGTGCCAGCAGGTCTTGGTGAAAGTTaGCTAACTCCTGTCGGATCTCTTCAGGGAGAGGACACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PPTGFHNVPAGLGES*LTPVGSLQGEDTLP
Trigger: AGGAAGAGTGTCCTCTCCCTGAAGAGATCCGACAGGAGTTAGTCAACTTTCACCAAGACCTGCTGGCACATTGTGGAATCCAGTTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp GGTAGTCTTCGTCCAGTTTGCTCTTTTCAGTTAGAGCTGTGCGGCTaGAGTGTAGGACCAACTGGTGTAAGGGGTCTGGCTTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: GSLRPVCSFQLELCG*SVGPTGVRGLASSP
Trigger: AGGAGAAGAAGCCAGACCCCTTACACCAGTTGGTCCTACACTTCAGCCGCACAGCTCTAACTGAAAAGAGCAAACTGGACGAAGACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp CCAGCCAATCCAAGTTTGTGGAGAAGAGCGCACAGTTGGTGCGATTaGCACGGATCAGAGAGGCTAGAAGTTCATAGAGCAGGTTCACAA +
Preference number: 5 (lower is better)
Translates to: PANPSLWRRAHSWCD*HGSERLEVHRAGSQ
Trigger: TTGTGAACCTGCTCTATGAACTTCTAGCCTCTCTGATCCGTGGCAATCGCACCAACTGTGCGCTCTTCTCCACAAACTTGGATTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 90 bp TCTTGTTGTCATCCCGTACCGGACCATAGGTCCATCCTTGCTCAATaGGAGTCAGTGCCCAGAGTTCATGAATGTTCTCTGCCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SCCHPVPDHRSILAQ*ESVPRVHECSLPAS
Trigger: AGAAGCTGGCAGAGAACATTCATGAACTCTGGGCACTGACTCGCATTGAGCAAGGATGGACCTATGGTCCGGTACGGGATGACAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp ATGTCAGGAAGGAACCCCACATCCAGCACATGCAGCAAGAAGTCCTaGTTCTCAATGCCATACACTCGGTCCAGGAAAAGCACCATGGAT +
Preference number: 5 (lower is better)
Translates to: MSGRNPTSSTCSKKS*FSMPYTRSRKSTMD
Trigger: ATCCATGGTGCTTTTCCTGGACCGAGTGTATGGCATTGAGAACCAGGACTTCTTGCTGCATGTGCTGGATGTGGGGTTCCTTCCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTACATCCAGCTTCTCCTaGGAGATTCGGAAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGATSSFS*EIRKQK
Trigger: CTTTTGCTTCCGAATCTCCAAGGAGAAGCTGGATGT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGATCATCAGCACCATTTTaGAAGTGCAATAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: SSSGSSVPSCLGRSSQWRSSAPF*KCNSML
Trigger: CAACATGCTATTGCACTTCAAAAATGGTGCTGATGA...TCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTAAGGCTAGCTCGTTGTaGTCAATGACAGAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAKASSL*SMTEAA
Trigger: TGCTGCTTCTGTCATTGACAACAACGAGCTAGCCTT...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAAGCTTGAGTGGCATCTaGGCGAACTCATTGAGGATG +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGSLSGI*ANSLRM
Trigger: CATCCTCAATGAGTTCGCCAAGATGCCACTCAAGCT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGTGGAGAAATATGTCTGGGCGGTTaGGGATATCTTTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LVQDHLSPAAWGGARSGEICLGG*GYLSCF
Trigger: AAAACAAGAAAGATATCCCAAACCGCCCAGACATAT...TTCTCCACTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGGTGGTTGGTGAAGTATaGGTTGATCAAAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRVVGEV*VDQRQQ
Trigger: CTGCTGCCTTTGATCAACCAATACTTCACCAACCAC...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGATTTTGGAAATCATTGTaGTGCCCCTCGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGFWKSL*CPSQSS
Trigger: GCTGCTCTGCGAGGGGCACAACAATGATTTCCAAAA...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCGTGCAGATAATGATATaGATGGTGGTCGTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARVQIMI*MVVVFP
Trigger: TGGGAACACGACCACCATCAATATCATTATCTGCAC...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAAGAATCATCTCCACATaGGACGAAGACTCCACGAGC +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGRIIST*DEDSTS
Trigger: GCTCGTGGAGTCTTCGTCCAATGTGGAGATGATTCT...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGACCTGCCTTGGCCATTTaGCTCTTATTGTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGPALAI*LLLSAV
Trigger: GACAGCTGACAATAAGAGCAAAATGGCCAAGGCAGG...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGAAGCTCATGTCATGTaGATGGTAGTCAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGEAHVM*MVVRSD
Trigger: GTCACTCCTGACTACCATCAACATGACATGAGCTTC...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCAGATATGTCTGGGCGGTTaGGGATATCTTTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: YWSSSGSSVPSCLGRSSQICLGG*GYLSCF
Trigger: AAAACAAGAAAGATATCCCAAACCGCCCAGACATAT...CTGCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTTGGTGAAGTATTGGTaGATCAAAGGCAGCAGAATC +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARLVKYW*IKGSRI
Trigger: GATTCTGCTGCCTTTGATCAACCAATACTTCACCAA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp ACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAACCACCTTGGCCATTTaGCTCTTATTGTCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: TGFIGLVQDHLSPAAWGGTTLAI*LLLSAV
Trigger: GACAGCTGACAATAAGAGCAAAATGGCCAAGGTGGT...TCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032813.10
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGTGCAGATAATGATATaGATGGTGGTCGTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAVQIMI*MVVVFP
Trigger: TGGGAACACGACCACCATCAATATCATTATCTGCAC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CAAAGGCAGCAGAATCTTAGCAAAGAATTTAATCTCCTGTTCATGTaGGGATTTCTCCACCCGTCCACTGCTAACCACAGCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: QRQQNLSKEFNLLFM*GFLHPSTANHSLQV
Trigger: CACCTGGAGGCTGTGGTTAGCAGTGGACGGGTGGAGAAATCCCCACATGAACAGGAGATTAAATTCTTTGCTAAGATTCTGCTGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCTCATCAGCACCATTTTaGAAGTGCAATAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARSSAPF*KCNSML
Trigger: CAACATGCTATTGCACTTCAAAAATGGTGCTGATGA...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp TTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTCGCCATCAGGTTTGGGTGTaGGTAGAAGACTTTGTTATT +
Preference number: 5 (lower is better)
Translates to: FIGLVQDHLSPAAWGGARHQVWV*VEDFVI
Trigger: AATAACAAAGTCTTCTACCAACACCCAAACCTGATG...GCGAGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp GGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGCTGCAAACTCTTCGCAGTaGATCATCTCATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: GFIGLVQDHLSPAAWGGAANSSQ*IISFSS
Trigger: AGATGAGAATGAGATGATCAACTGCGAAGAGTTTGC...AGCTCCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGAGATACAGGAAAGAGTaGTCTGTGAAGATGACTCCA +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRRYRKE*SVKMTP
Trigger: TGGAGTCATCTTCACAGACAACTCTTTCCTGTATCT...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 90 bp TCTCTACTGTCCATTCCCAGGCAATCATGGCCTTCAAAGACTCCTTaGTGGGCCAACGGTAAATCTCTTTGTCCTTCTCTGAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SLLSIPRQSWPSKTP*WANGKSLCPSLRRS
Trigger: AGACCTTCTCAGAGAAGGACAAAGAGATTTACCGTTGGCCCATCAAGGAGTCTTTGAAGGCCATGATTGCCTGGGAATGGACAGTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp CGTAGTAGACAAGTCTGCGTTGATCATCACTGTCAGAAGGGGAGATaGTCAAACATTCATCCATATGTCCATGAAAGAGGCGCAGGACGT +
Preference number: 5 (lower is better)
Translates to: RSRQVCVDHHCQKGR*SNIHPYVHERGAGR
Trigger: ACGTCCTGCGCCTCTTTCATGGACATATGGATGAATGTTTGACCATCTCCCCTTCTGACAGTGATGATCAACGCAGACTTGTCTACTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp CACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGAGGCATCAGGTTTGGGTGTaGGTAGAAGACTTTGTTATT +
Preference number: 5 (lower is better)
Translates to: HRIYWSSSGSSVPSCLGRHQVWV*VEDFVI
Trigger: AATAACAAAGTCTTCTACCAACACCCAAACCTGATG...CCTCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS-3UTR CAA 90 bp AGCACAGGATTTATTGGTCTAGTTCAGGATCATCTGTCCCCAGCTGCCTGGGGACATCAGGTTTGGGTGTaGGTAGAAGACTTTGTTATT +
Preference number: 5 (lower is better)
Translates to: STGFIGLVQDHLSPAAWGHQVWV*VEDFVI
Trigger: AATAACAAAGTCTTCTACCAACACCCAAACCTGATG...TCCCCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 90 bp TACAGGAAAGAGTTGTCTGTGAAGATGACTCCAAACTTCCAGATCTaGTATTTGACATCGATAGACATGATCCATGTCAGCAGGCCCGGT +
Preference number: 5 (lower is better)
Translates to: YRKELSVKMTPNFQI*YLTSIDMIHVSRPG
Trigger: ACCGGGCCTGCTGACATGGATCATGTCTATCGATGTCAAATACCAGATCTGGAAGTTTGGAGTCATCTTCACAGACAACTCTTTCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CCCTCGCCCTCTGCATCGCTGCCAGCGCCGCTCGGCTaGTGGCCGTGCACCTCGTCGCCGGTGGGGTCCGGC +
Preference number: 6 (lower is better)
Translates to: PSPSASLPAPLG*WPCTSSPVGSG
Trigger: GCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCGAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AGTCGCTGCCAGCCACACCCACACGCCCGCAGCCGCTaGAGAGCCCGACCCGTCGGAACCCGCCGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: SRCQPHPHARSR*RARPVGTRRAL
Trigger: GAGGGCGCGGCGGGTTCCGACGGGTCGGGCTCTGCAGCGGCTGCGGGCGTGTGGGTGTGGCTGGCAGCGACT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp TCTGCATCGCTGCCAGCGCCGCTCGGCTGCTGGCCGTaGACCTCGTCGCCGGTGGGGTCCGGCATGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SASLPAPLGCWP*TSSPVGSGMPA
Trigger: GGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCGGCGCTGGCAGCGATGCAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp ACCACCGGCGCCTTCTGGCCGGAAGGGACTCCCATCTaGCACGGCCACCGCCCCGTCGGCACCTCCCGTGCC +
Preference number: 6 (lower is better)
Translates to: TTGAFWPEGTPI*HGHRPVGTSRA
Trigger: GGCACGGGAGGTGCCGACGGGGCGGTGGCCGTGGCAGATGGGAGTCCCTTCCGGCCAGAAGGCGCCGGTGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CGCCGCTCGGCTGCTGGCCGTGCACCTCGTCGCCGGTaGGGTCCGGCATGCCTGCCAGGAGCTCCGTCACTG +
Preference number: 6 (lower is better)
Translates to: RRSAAGRAPRRR*GPACLPGAPSL
Trigger: CAGTGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCGGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TCGCCCTCTGCATCGCTGCCAGCGCCGCTCGGCTGCTaGCCGTGCACCTCGTCGCCGGTGGGGTCCGGCATG +
Preference number: 6 (lower is better)
Translates to: SPSASLPAPLGC*PCTSSPVGSGM
Trigger: CATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CGCCCCGTCGGCACCTCCCGTGCCAGCCTGGTCCGCTaGAGCCTCTTCATCTCCGGCGCCGTCGGCAGCATC +
Preference number: 6 (lower is better)
Translates to: RPVGTSRASLVR*SLFISGAVGSI
Trigger: GATGCTGCCGACGGCGCCGGAGATGAAGAGGCTGCAGCGGACCAGGCTGGCACGGGAGGTGCCGACGGGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CATCTGCCACGGCCACCGCCCCGTCGGCACCTCCCGTaGCAGCCTGGTCCGCTGCAGCCTCTTCATCTCCGG +
Preference number: 6 (lower is better)
Translates to: HLPRPPPRRHLP*QPGPLQPLHLR
Trigger: CCGGAGATGAAGAGGCTGCAGCGGACCAGGCTGGCACGGGAGGTGCCGACGGGGCGGTGGCCGTGGCAGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GGGGCTCCTCACCAAAGTGCTCACGTCGCCGGTCCCTaGGGACACCCGGCCCATCCCGTGCGGGATCCTCAG +
Preference number: 6 (lower is better)
Translates to: GAPHQSAHVAGP*GHPAHPVRDPQ
Trigger: CTGAGGATCCCGCACGGGATGGGCCGGGTGTCCGCAGGGACCGGCGACGTGAGCACTTTGGTGAGGAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AGCATCGCCTTCGCCTTCTCCCTCACCCTCGCCCTCTaGATCGCTGCCAGCGCCGCTCGGCTGCTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: SIAFAFSLTLAL*IAASAARLLAV
Trigger: CACGGCCAGCAGCCGAGCGGCGCTGGCAGCGATGCAGAGGGCGAGGGTGAGGGAGAAGGCGAAGGCGATGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GCCGTGCACCTCGTCGCCGGTGGGGTCCGGCATGCCTaGCAGGAGCTCCGTCACTGTCACCTTCTTGGCGCT +
Preference number: 6 (lower is better)
Translates to: AVHLVAGGVRHA*QELRHCHLLGA
Trigger: AGCGCCAAGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GCTGGCCGTGCACCTCGTCGCCGGTGGGGTCCGGCATaGCTGCCAGGAGCTCCGTCACTGTCACCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: AGRAPRRRWGPA*LPGAPSLSPSW
Trigger: CCAAGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGCCGGACCCCACCGGCGACGAGGTGCACGGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp ATGGCGGCGGGGGCCATCTTCCGCACTTCGCCCAGGTaGGAAAAGCGTGATGGCGCGGGTCTCCGGCGTGAG +
Preference number: 6 (lower is better)
Translates to: MAAGAIFRTSPR*EKRDGAGLRRE
Trigger: CTCACGCCGGAGACCCGCGCCATCACGCTTTTCCCACCTGGGCGAAGTGCGGAAGATGGCCCCCGCCGCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CTCAGGGAGGTTGTGACCCCAACGCCAGGCAGGCCATaGCGGCGGGGGCCATCTTCCGCACTTCGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: LREVVTPTPGRP*RRGPSSALRPG
Trigger: ACCTGGGCGAAGTGCGGAAGATGGCCCCCGCCGCCATGGCCTGCCTGGCGTTGGGGTCACAACCTCCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CGTGTCACCCATATCCCCGAGACCACCGGCGCCTTCTaGCCGGAAGGGACTCCCATCTGCCACGGCCACCGC +
Preference number: 6 (lower is better)
Translates to: RVTHIPETTGAF*PEGTPICHGHR
Trigger: GCGGTGGCCGTGGCAGATGGGAGTCCCTTCCGGCCAGAAGGCGCCGGTGGTCTCGGGGATATGGGTGACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp CCTTGTCTCGCAGAGCCTCCAGAGGGATGGCAGGGCTaGGGCGAGCCGGAGCTTCTGTGGCCCCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: PCLAEPPEGWQG*GEPELLWPQQL
Trigger: CAGCTGCTGGGGCCACAGAAGCTCCGGCTCGCCTCAGCCCTGCCATCCCTCTGGAGGCTCTGCGAGACAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CCCTCGCAGGCTGAGCCTCTACCCCAGCCTGGGCAGTaGCTCCGGGTGTCCCCTCCTTGGCAGTTCCATCCT +
Preference number: 6 (lower is better)
Translates to: PSQAEPLPQPGQ*LRVSPPWQFHP
Trigger: AGGATGGAACTGCCAAGGAGGGGACACCCGGAGGCACTGCCCAGGCTGGGGTAGAGGCTCAGCCTGCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GGCAGGGCACGCAGCAGCTCGCCGAGCCCGTCATACTaGCGATGCAGGAGGCTGAACATGGCACGGACCAGC +
Preference number: 6 (lower is better)
Translates to: GRARSSSPSPSY*RCRRLNMARTS
Trigger: GCTGGTCCGTGCCATGTTCAGCCTCCTGCATCGGCAGTATGACGGGCTCGGCGAGCTGCTGCGTGCCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CAGCGCCATGAGGCAGTCCTCGATGACGTCGCGCTGTaGTTTGGTGAGCGAGCGGCCCCGCGACAGCCGGTA +
Preference number: 6 (lower is better)
Translates to: QRHEAVLDDVAL*FGERAAPRQPV
Trigger: TACCGGCTGTCGCGGGGCCGCTCGCTCACCAAAGCACAGCGCGACGTCATCGAGGACTGCCTCATGGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CAGCCTGGCAGAGGCTGTCCCTATTGCTGCGCTTGGTaGCCTCGTCCAGCAGGCGGTAGGGCACGAGGCGAG +
Preference number: 6 (lower is better)
Translates to: QPGRGCPYCCAW*PRPAGGRARGE
Trigger: CTCGCCTCGTGCCCTACCGCCTGCTGGACGAGGCCACCAAGCGCAGCAATAGGGACAGCCTCTGCCAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCACAGCCTGGCAGAGGCTGTCCCTATTGCTGCGCTTaGTGGCCTCGTCCAGCAGGCGGTAGGGCACGAGGC +
Preference number: 6 (lower is better)
Translates to: AQPGRGCPYCCA*WPRPAGGRARG
Trigger: GCCTCGTGCCCTACCGCCTGCTGGACGAGGCCACCAAGCGCAGCAATAGGGACAGCCTCTGCCAGGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GGGAGCGTAGGAGCTCCGGCCTGGCACGGCTCACAATaGGCTGGGCAAACACGGCCAGCCGCTTCATCCACG +
Preference number: 6 (lower is better)
Translates to: GSVGAPAWHGSQ*AGQTRPAASST
Trigger: CGTGGATGAAGCGGCTGGCCGTGTTTGCCCAGCCCATTGTGAGCCGTGCCAGGCCGGAGCTCCTACGCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp GTGGGGTCCGGCATGCCTGCCAGGAGCTCCGTCACTGTCACCTTCTaGGCGCTGTCTACCAGCCCACCGCCAAACAGCGAGCCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: VGSGMPARSSVTVTF*ALSTSPPPNSEPQS
Trigger: GCTCTGGGGCTCGCTGTTTGGCGGTGGGCTGGTAGACAGCGCCAAGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGCCGGACCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GATGCCAGGGGTGTGGCCCCTGCGGTGCAGCGGAAGTaGTGGTGGAACTGGACCGGAAGGCTTAGCCGGAGA +
Preference number: 6 (lower is better)
Translates to: DARGVAPAVQRK*WWNWTGRLSRR
Trigger: TCTCCGGCTAAGCCTTCCGGTCCAGTTCCACCAGCACTTCCGCTGCACCGCAGGGGCCACACCCCTGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp ACGTCGCCGGTCCCTGCGGACACCCGGCCCATCCCGTaGGGGATCCTCAGAGATTCGGATGGCCTCTTCGAT +
Preference number: 6 (lower is better)
Translates to: TSPVPADTRPIP*GILRDSDGLFD
Trigger: ATCGAAGAGGCCATCCGAATCTCTGAGGATCCCGCACGGGATGGGCCGGGTGTCCGCAGGGACCGGCGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp TGCAGGAAGCCCACCACGGCATCCCAGAGGCGACTGTaGGCCAGACTCTGCTGGTTTCCGGTGCAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: CRKPTTASQRRL*ARLCWFPVQGP
Trigger: GGGACCCTGCACCGGAAACCAGCAGAGTCTGGCGCACAGTCGCCTCTGGGATGCCGTGGTGGGCTTCCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCCAGGGGTGTGGCCCCTGCGGTGCAGCGGAAGTGCTaGTGGAACTGGACCGGAAGGCTTAGCCGGAGAAAC +
Preference number: 6 (lower is better)
Translates to: ARGVAPAVQRKC*WNWTGRLSRRN
Trigger: GTTTCTCCGGCTAAGCCTTCCGGTCCAGTTCCACCAGCACTTCCGCTGCACCGCAGGGGCCACACCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CACCATGATGGCGCGGTGCTCGGTGCCCGCAAAGAGTaGCGCGCACTTGGTGATGAGCGGCAGCACAGCCAG +
Preference number: 6 (lower is better)
Translates to: HHDGAVLGARKE*RALGDERQHSQ
Trigger: CTGGCTGTGCTGCCGCTCATCACCAAGTGCGCGCCACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GAGCTCACATCCTGGCCCAGGTTCAGGTGGCCCACCTaGCCAGGTCCCAAGCTGCAGACTGGCAGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: ELTSWPRFRWPT*PGPKLQTGRKP
Trigger: CGGCTTCCTGCCAGTCTGCAGCTTGGGACCTGGTCAGGTGGGCCACCTGAACCTGGGCCAGGATGTGAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GTGGTAGCGTCTTTCTCATTCTCCGCCCTCGCAGGCTaGGCCTCTACCCCAGCCTGGGCAGTGCCTCCGGGT +
Preference number: 6 (lower is better)
Translates to: VVASFSFSALAG*ASTPAWAVPPG
Trigger: ACCCGGAGGCACTGCCCAGGCTGGGGTAGAGGCTCAGCCTGCGAGGGCGGAGAATGAGAAAGACGCTACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AGGCTCTGTCGGTTGCGCAGGCTGCGCAGCTTGGTCTaGTTCTCCTCGTGCTGCAGCTCCTCTGAAGGCGGC +
Preference number: 6 (lower is better)
Translates to: RLCRLRRLRSLV*FSSCCSSSEGG
Trigger: GCCGCCTTCAGAGGAGCTGCAGCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGCGCAACCGACAGAGCCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CCCGTTCTCTGCCAGCCGGTCCACCAGAGTTGTCTGTaGAGGCGTCAGCCTCACGTGGCTCAGGTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: PVLCQPVHQSCL*RRQPHVAQVQR
Trigger: CCTCTGGACCTGAGCCACGTGAGGCTGACGCCTGCACAGACAACTCTGGTGGACCGGCTGGCAGAGAACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GTACCAGCGGCCGCTCTGGACTGCATAGGACTTCTCTaGCCGGAAGATGCGGGCCCGGTCACCACGAGACTG +
Preference number: 6 (lower is better)
Translates to: VPAAALDCIGLL*PEDAGPVTTRL
Trigger: CAGTCTCGTGGTGACCGGGCCCGCATCTTCCGGGCAGAGAAGTCCTATGCAGTCCAGAGCGGCCGCTGGTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp TGTACCCGGTTTTCTTCAGGGGGCTCCTCACCAAAGTaGTCACGTCGCCGGTCCCTGCGGACACCCGGCCCA +
Preference number: 6 (lower is better)
Translates to: CTRFSSGGSSPK*SRRRSLRTPGP
Trigger: TGGGCCGGGTGTCCGCAGGGACCGGCGACGTGAGCACTTTGGTGAGGAGCCCCCTGAAGAAAACCGGGTACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AGGTTCTGGCCCACGCCCTTCACCTGCGTGCGCGCCTaGGACACCTTTCCTAGCCGCAGGTTCTCCACCATC +
Preference number: 6 (lower is better)
Translates to: RFWPTPFTCVRA*DTFPSRRFSTI
Trigger: GATGGTGGAGAACCTGCGGCTAGGAAAGGTGTCGCAGGCGCGCACGCAGGTGAAGGGCGTGGGCCAGAACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp AGGGGTGTGGCCCCTGCGGTGCAGCGGAAGTGCTGGTaGAACTGGACCGGAAGGCTTAGCCGGAGAAACAGC +
Preference number: 6 (lower is better)
Translates to: RGVAPAVQRKCW*NWTGRLSRRNS
Trigger: GCTGTTTCTCCGGCTAAGCCTTCCGGTCCAGTTCCACCAGCACTTCCGCTGCACCGCAGGGGCCACACCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCCCGCTTACGCAATCGCCCGATGGTAGGGATGAAGTaGGAGCGTAGGAGCTCCGGCCTGGCACGGCTCACA +
Preference number: 6 (lower is better)
Translates to: ARLRNRPMVGMK*ERRSSGLARLT
Trigger: TGTGAGCCGTGCCAGGCCGGAGCTCCTACGCTCCCACTTCATCCCTACCATCGGGCGATTGCGTAAGCGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GCAGCAGCTGACCACATCCTCCGGGGCCAAGAGGTGTaGTCCCGGAGAAGTCACTGGGCGTGCCACATGCCC +
Preference number: 6 (lower is better)
Translates to: AAADHILRGQEV*SRRSHWACHMP
Trigger: GGGCATGTGGCACGCCCAGTGACTTCTCCGGGACAACACCTCTTGGCCCCGGAGGATGTGGTCAGCTGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CCCCCGAGGCCCCTCCCTGCGATACTCTTTGATGGGTaGGAGATGGAGCCGCTCCCGAGGGAGCACAGCTTC +
Preference number: 6 (lower is better)
Translates to: PPRPLPAILFDG*EMEPLPREHSF
Trigger: GAAGCTGTGCTCCCTCGGGAGCGGCTCCATCTCCAACCCATCAAAGAGTATCGCAGGGAGGGGCCTCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp CCCAGCCGCTCTCCAGCACGCCGCGTGTCCACCTGTAGGAAGTGGTaGGGCATTCGGCTCCACGAGACAGGCATCAGCATCTGCACCTCC +
Preference number: 6 (lower is better)
Translates to: PSRSPARRVSTCRKW*GIRLHETGISICTS
Trigger: GGAGGTGCAGATGCTGATGCCTGTCTCGTGGAGCCGAATGCCCAACCACTTCCTACAGGTGGACACGCGGCGTGCTGGAGAGCGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp TGCTGTCCTCCATCACGCACGGCTTCCCCCAACATTCTCAGCGCCTaGTCTCGCAGAGCCTCCAGAGGGATGGCAGGGCTGAGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: CCPPSRTASPNILSA*SRRASRGMAGLRRA
Trigger: GGCTCGCCTCAGCCCTGCCATCCCTCTGGAGGCTCTGCGAGACAAGGCGCTGAGAATGTTGGGGGAAGCCGTGCGTGATGGAGGACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CCTCCTCCTGGAAGAGGCTCTGTCGGTTGCGCAGGCTaGGCAGCTTGGTCTGCTTCTCCTCGTGCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: PPPGRGSVGCAG*AAWSASPRAAA
Trigger: AGCTGCAGCACGAGGAGAAGCAGACCAAGCTGCGCAGCCTGCGCAACCGACAGAGCCTCTTCCAGGAGGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CACGCGGTCTCTCGCCCAGACATTGTGCCCGTTCTCTaGCAGCCGGTCCACCAGAGTTGTCTGTGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: HAVSRPDIVPVL*QPVHQSCLCRR
Trigger: ACGCCTGCACAGACAACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAATGTCTGGGCGAGAGACCGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CAGCCTTGTGCCACGCGGTCTCTCGCCCAGACATTGTaGCCGTTCTCTGCCAGCCGGTCCACCAGAGTTGTC +
Preference number: 6 (lower is better)
Translates to: QPCATRSLAQTL*PFSASRSTRVV
Trigger: GACAACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAATGTCTGGGCGAGAGACCGCGTGGCACAAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CAGCAGGCGGTAGGGCACGAGGCGAGGATTTCTGCGTaGAGGGATGTCCTGCACAGCACTGTAGCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: QQAVGHEARISA*RDVLHSTVAPA
Trigger: GGCTGGAGCTACAGTGCTGTGCAGGACATCCCTGCACGCAGAAATCCTCGCCTCGTGCCCTACCGCCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CAGGCGCAGCTGCTCCTCCTCAGCCACCACCTTCCCTaGCCGCTTACGCAATCGCCCGATGGTAGGGATGAA +
Preference number: 6 (lower is better)
Translates to: QAQLLLLSHHLP*PLTQSPDGRDE
Trigger: TTCATCCCTACCATCGGGCGATTGCGTAAGCGGGCAGGGAAGGTGGTGGCTGAGGAGGAGCAGCTGCGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp ACCACGGCATCCCAGAGGCGACTGTGCGCCAGACTCTaGTGGTTTCCGGTGCAGGGTCCCTGGATGTACTCG +
Preference number: 6 (lower is better)
Translates to: TTASQRRLCARL*WFPVQGPWMYS
Trigger: CGAGTACATCCAGGGACCCTGCACCGGAAACCAGCAGAGTCTGGCGCACAGTCGCCTCTGGGATGCCGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp TCCAGGAAGTTGCGCAGGCGCGGGTCGTGGGGCACATaGTCTGACAGGTTGGTAAGCAGCACCGCCACGTTG +
Preference number: 6 (lower is better)
Translates to: SRKLRRRGSWGT*SDRLVSSTATL
Trigger: CAACGTGGCGGTGCTGCTTACCAACCTGTCAGAGCATGTGCCCCACGACCCGCGCCTGCGCAACTTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCGTGGCCATACAAGAGTGTCCTGTGTCCCCCGCCCTaGGATGACTCCACACCGGCCTCCACAGTATTGGCC +
Preference number: 6 (lower is better)
Translates to: AWPYKSVLCPPP*DDSTPASTVLA
Trigger: GGCCAATACTGTGGAGGCCGGTGTGGAGTCATCCCAGGGCGGGGGACACAGGACACTCTTGTATGGCCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
CDS CCA 72 bp CTCCGGGGCCAAGAGGTGTTGTCCCGGAGAAGTCACTaGGCGTGCCACATGCCCTGTCCAAAGATGCAGCCC +
Preference number: 6 (lower is better)
Translates to: LRGQEVLSRRSH*ACHMPCPKMQP
Trigger: GGGCTGCATCTTTGGACAGGGCATGTGGCACGCCCAGTGACTTCTCCGGGACAACACCTCTTGGCCCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GTGGCCCCTGCGGTGCAGCGGAAGTGCTGGTGGAACTaGACCGGAAGGCTTAGCCGGAGAAACAGCATCTCC +
Preference number: 6 (lower is better)
Translates to: VAPAVQRKCWWN*TGRLSRRNSIS
Trigger: GGAGATGCTGTTTCTCCGGCTAAGCCTTCCGGTCCAGTTCCACCAGCACTTCCGCTGCACCGCAGGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GTGCGGGATCCTCAGAGATTCGGATGGCCTCTTCGATaGCAGCCAGCAGCCCTGAGCCACCCTCACCCCTCA +
Preference number: 6 (lower is better)
Translates to: VRDPQRFGWPLR*QPAALSHPHPS
Trigger: TGAGGGGTGAGGGTGGCTCAGGGCTGCTGGCTGCCATCGAAGAGGCCATCCGAATCTCTGAGGATCCCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CCACGAGGTCATCCAAGGGCACGAGGGACCGAAGGATaGCACGGATCCTCAGGGCCTCACCCTTACCGGCTT +
Preference number: 6 (lower is better)
Translates to: PRGHPRARGTEG*HGSSGPHPYRL
Trigger: AAGCCGGTAAGGGTGAGGCCCTGAGGATCCGTGCCATCCTTCGGTCCCTCGTGCCCTTGGATGACCTCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp ACGGCATCCCAGAGGCGACTGTGCGCCAGACTCTGCTaGTTTCCGGTGCAGGGTCCCTGGATGTACTCGGTG +
Preference number: 6 (lower is better)
Translates to: TASQRRLCARLC*FPVQGPWMYSV
Trigger: CACCGAGTACATCCAGGGACCCTGCACCGGAAACCAGCAGAGTCTGGCGCACAGTCGCCTCTGGGATGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TCAGCCAGCTCCAGGAAGTTGCGCAGGCGCGGGTCGTaGGGCACATGCTCTGACAGGTTGGTAAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: SASSRKLRRRGS*GTCSDRLVSST
Trigger: GGTGCTGCTTACCAACCTGTCAGAGCATGTGCCCCACGACCCGCGCCTGCGCAACTTCCTGGAGCTGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCATGCCTGCCAGGAGCTCCGTCACTGTCACCTTCTTaGCGCTGTCTACCAGCCCACCGCCAAACAGCGAGC +
Preference number: 6 (lower is better)
Translates to: ACLPGAPSLSPS*RCLPAHRQTAS
Trigger: GCTCGCTGTTTGGCGGTGGGCTGGTAGACAGCGCCAAGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CTCCAGCCTTGTGCCACGCGGTCTCTCGCCCAGACATaGTGCCCGTTCTCTGCCAGCCGGTCCACCAGAGTT +
Preference number: 6 (lower is better)
Translates to: LQPCATRSLAQT*CPFSASRSTRV
Trigger: AACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAATGTCTGGGCGAGAGACCGCGTGGCACAAGGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CCATCACGCACGGCTTCCCCCAACATTCTCAGCGCCTaGTCTCGCAGAGCCTCCAGAGGGATGGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: PSRTASPNILSA*SRRASRGMAGL
Trigger: CAGCCCTGCCATCCCTCTGGAGGCTCTGCGAGACAAGGCGCTGAGAATGTTGGGGGAAGCCGTGCGTGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GGCATGCCTGCCAGGAGCTCCGTCACTGTCACCTTCTaGGCGCTGTCTACCAGCCCACCGCCAAACAGCGAG +
Preference number: 6 (lower is better)
Translates to: GMPARSSVTVTF*ALSTSPPPNSE
Trigger: CTCGCTGTTTGGCGGTGGGCTGGTAGACAGCGCCAAGAAGGTGACAGTGACGGAGCTCCTGGCAGGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp TCGCCCAGACATTGTGCCCGTTCTCTGCCAGCCGGTCCACCAGAGTaGTCTGTGCAGGCGTCAGCCTCACGTGGCTCAGGTCCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SPRHCARSLPAGPPE*SVQASASRGSGPEE
Trigger: CTCCTCTGGACCTGAGCCACGTGAGGCTGACGCCTGCACAGACAACTCTGGTGGACCGGCTGGCAGAGAACGGGCACAATGTCTGGGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp GCATTCGGCTCCACGAGACAGGCATCAGCATCTGCACCTCCAGCCTaGGTGGGCACTGTGGGGCTGGGTTCTTGCGCTCGCTCAGGAACA +
Preference number: 6 (lower is better)
Translates to: AFGSTRQASASAPPA*VGTVGLGSCARSGT
Trigger: TGTTCCTGAGCGAGCGCAAGAACCCAGCCCCACAGTGCCCACCAAGGCTGGAGGTGCAGATGCTGATGCCTGTCTCGTGGAGCCGAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp ACAGCCGGTACACTGTGTGTAGCATGGAGTCCACCATaGTGGCGCGGTGCTCGGTGCCCGCAAAGAGTGGCG +
Preference number: 6 (lower is better)
Translates to: TAGTLCVAWSPP*WRGARCPQRVA
Trigger: CGCCACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGTGGACTCCATGCTACACACAGTGTACCGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GGAGCGGCGCAGGTTTTCATAGTCCGTATCCGGTTCTaGTGCCCGGGCCTCATCTTCAGCAGGAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GAAQVFIVRIRF*CPGLIFSRRLQ
Trigger: CTGCAGCCTCCTGCTGAAGATGAGGCCCGGGCAGCAGAACCGGATACGGACTATGAAAACCTGCGCCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CTCCTGGGGTGGAGAACGGAACTCTCGGGTGCGCCTTaGGGTCTCGGCTGCGCTCATGGTGAAGGCTTTCAT +
Preference number: 6 (lower is better)
Translates to: LLGWRTELSGAP*GLGCAHGEGFH
Trigger: ATGAAAGCCTTCACCATGAGCGCAGCCGAGACCGCAAGGCGCACCCGAGAGTTCCGTTCTCCACCCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GAGCGGCAGCACAGCCAGACAGAGGTAGCGGTTCAGTaGCAGCGCCATCTCCGTGGTGCTGAAAGTAGCCGT +
Preference number: 6 (lower is better)
Translates to: ERQHSQTEVAVQ*QRHLRGAESSR
Trigger: ACGGCTACTTTCAGCACCACGGAGATGGCGCTGGCACTGAACCGCTACCTCTGTCTGGCTGTGCTGCCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp ACTGTGTGTAGCATGGAGTCCACCATGATGGCGCGGTaGTCGGTGCCCGCAAAGAGTGGCGCGCACTTGGTG +
Preference number: 6 (lower is better)
Translates to: TVCSMESTMMAR*SVPAKSGAHLV
Trigger: CACCAAGTGCGCGCCACTCTTTGCGGGCACCGAGCACCGCGCCATCATGGTGGACTCCATGCTACACACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp ATGGGCACATCGAACACCAGGCGTCGAAGCAGGTGCTaGAGCATGGACGGGCGGATATACCTGCACAGCGCC +
Preference number: 6 (lower is better)
Translates to: MGTSNTRRRSRC*SMDGRIYLHSA
Trigger: GGCGCTGTGCAGGTATATCCGCCCGTCCATGCTGCAGCACCTGCTTCGACGCCTGGTGTTCGATGTGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AGGATGACATCGTCTCCGAACTGGTGCTGGGCGATGTaGTGGAAGAGGGTGGTGAGGACGGGCAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: RMTSSPNWCWAM*WKRVVRTGSRA
Trigger: GGCTCTGCTGCCCGTCCTCACCACCCTCTTCCAGCACATCGCCCAGCACCAGTTCGGAGACGATGTCATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TACATACGACTGTGTGCGTGCCGGAGCAGGATGGCGTaGCCATACAAGAGTGTCCTGTGTCCCCCGCCCTGG +
Preference number: 6 (lower is better)
Translates to: YIRLCACRSRMA*PYKSVLCPPPW
Trigger: CCAGGGCGGGGGACACAGGACACTCTTGTATGGCCACGCCATCCTGCTCCGGCACGCACACAGTCGTATGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GATGAGGAGGTCGTAGTAGCCTGCTCGCAGAGGACCTaGCAAGCGCGCATCCTCCAGCGCATGCAACAGCTG +
Preference number: 6 (lower is better)
Translates to: DEEVVVACSQRT*QARILQRMQQL
Trigger: CAGCTGTTGCATGCGCTGGAGGATGCGCGCTTGCCAGGTCCTCTGCGAGCAGGCTACTACGACCTCCTCATC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TGGGAAAAGCGTGATGGCGCGGGTCTCCGGCGTGAGTaGCACGATGTACTCAGAGAGCATGGAGCGACGGCT +
Preference number: 6 (lower is better)
Translates to: WEKRDGAGLRRE*HDVLREHGATA
Trigger: AGCCGTCGCTCCATGCTCTCTGAGTACATCGTGCCACTCACGCCGGAGACCCGCGCCATCACGCTTTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CAGTGCGCCATCTTTGCCCAGGGTGGGGATCTGCAGTaGGAGGCTGATGATGCCCACGAGGTCATCCAAGGG +
Preference number: 6 (lower is better)
Translates to: QCAIFAQGGDLQ*EADDAHEVIQG
Trigger: CCCTTGGATGACCTCGTGGGCATCATCAGCCTCCCACTGCAGATCCCCACCCTGGGCAAAGATGGCGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp CCTGAGCCACCCTCACCCCTCAGGGCAGGTCCAAAGCACTCGGGTTaGCGGATCAACAGCCGCACAACCACGTTAGCGTTCTCTTCCACG +
Preference number: 6 (lower is better)
Translates to: PEPPSPLRAGPKHSG*RINSRTTTLAFSST
Trigger: CGTGGAAGAGAACGCTAACGTGGTTGTGCGGCTGTTGATCCGCAAACCCGAGTGCTTTGGACCTGCCCTGAGGGGTGAGGGTGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GCCATACAAGAGTGTCCTGTGTCCCCCGCCCTGGGATaGCTCCACACCGGCCTCCACAGTATTGGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: AIQECPVSPALG*LHTGLHSIGQH
Trigger: ATGCTGGCCAATACTGTGGAGGCCGGTGTGGAGTCATCCCAGGGCGGGGGACACAGGACACTCTTGTATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
CDS TCA 72 bp GGCTGGGTTCTTGCGCTCGCTCAGGAACATGGCGGCTaGCAGCGGCATGATGTTCTTCTGCTTCCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: GWVLALAQEHGG*QRHDVLLLPQL
Trigger: GAGCTGGGGAAGCAGAAGAACATCATGCCGCTGTCAGCCGCCATGTTCCTGAGCGAGCGCAAGAACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GTTCTCCTCCTGGGGACCCATCTGCACAATGAGCAGTaGGCGGATCTGGCCCAGGCACTCCAGCAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: VLLLGTHLHNEQ*ADLAQALQQAH
Trigger: ATGAGCCTGCTGGAGTGCCTGGGCCAGATCCGCTCACTGCTCATTGTGCAGATGGGTCCCCAGGAGGAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GGGCCTTCTCTCGATCCCGTGCCTTCTCCTTGGCCGTaGGCGTGTCGTAGGGAACCAGTAGAGGATGAGACC +
Preference number: 6 (lower is better)
Translates to: GPSLDPVPSPWP*ACRREPVEDET
Trigger: GGTCTCATCCTCTACTGGTTCCCTACGACACGCTCACGGCCAAGGAGAAGGCACGGGATCGAGAGAAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TCGTCCTCCTCCGGCTCGCCCTCAGGCTCGGAGATCTaGGCTGCGATCTGCATCTCAAAGATCGTGTCCTCG +
Preference number: 6 (lower is better)
Translates to: SSSSGSPSGSEI*AAICISKIVSS
Trigger: CGAGGACACGATCTTTGAGATGCAGATCGCAGCTCAGATCTCCGAGCCTGAGGGCGAGCCGGAGGAGGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp CCGGTGGAGGGTCAGGTTTGCGCTCATTGTGGGCTGTaGTCTCCAGAGAGGCCAGATCCATGCCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: PVEGQVCAHCGL*SPERPDPCPAA
Trigger: AGCTGCTGGGCATGGATCTGGCCTCTCTGGAGATCACAGCCCACAATGAGCGCAAACCTGACCCTCCACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GCGCGTTGCTGGTGGGTTCCAGAAAGCAAAGGCGGTTaGCGAACCCCTCAGCGGCCAGACACAACTTCAGCT +
Preference number: 6 (lower is better)
Translates to: ARCWWVPESKGG*RTPQRPDTTSA
Trigger: AGCTGAAGTTGTGTCTGGCCGCTGAGGGGTTCGGCAACCGCCTTTGCTTTCTGGAACCCACCAGCAACGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp TCAGCGGCTCTAGCCTCCATAGGGAGCGGGCATGAGTaGACACAGGCCCTCCCTCGTAGTAGACAAGTCTGC +
Preference number: 6 (lower is better)
Translates to: SAALASIGSGHE*TQALPRSRQVC
Trigger: GCAGACTTGTCTACTACGAGGGAGGGCCTGTGTGCACTCATGCCCGCTCCCTATGGAGGCTAGAGCCGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AGGGATGTCCTGCACAGCACTGTAGCTCCAGCCTTGTaGCACGCGGTCTCTCGCCCAGACATTGTGCCCGTT +
Preference number: 6 (lower is better)
Translates to: RDVLHSTVAPAL*HAVSRPDIVPV
Trigger: AACGGGCACAATGTCTGGGCGAGAGACCGCGTGGCACAAGGCTGGAGCTACAGTGCTGTGCAGGACATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp TGCTTCAAACTCGAAGTACCAGCGGCCGCTCTGGACTaGATAGGACTTCTCTGCCCGGAAGATGCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: CFKLEVPAAALD*IGLLCPEDAGP
Trigger: CGGGCCCGCATCTTCCGGGCAGAGAAGTCCTATGCAGTCCAGAGCGGCCGCTGGTACTTCGAGTTTGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CCTTGCCCAGCCCACTCGCATCTCTCCTGTGGTGACTaGTTCAAACTCGAAGTACCAGCGGCCGCTCTGGAC +
Preference number: 6 (lower is better)
Translates to: PCPAHSHLSCGD*FKLEVPAAALD
Trigger: GTCCAGAGCGGCCGCTGGTACTTCGAGTTTGAAGCAGTCACCACAGGAGAGATGCGAGTGGGCTGGGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CCAGGTTCAGGTGGCCCACCTGACCAGGTCCCAAGCTaGAGACTGGCAGGAAGCCGTCCCCTATCTCAATGT +
Preference number: 6 (lower is better)
Translates to: PGSGGPPDQVPS*RLAGSRPLSQC
Trigger: ACATTGAGATAGGGGACGGCTTCCTGCCAGTCTGCAGCTTGGGACCTGGTCAGGTGGGCCACCTGAACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AGAACGGAACTCTCGGGTGCGCCTTGCGGTCTCGGCTaGGCTCATGGTGAAGGCTTTCATGAGGAGGCCGTA +
Preference number: 6 (lower is better)
Translates to: RTELSGAPCGLG*AHGEGFHEEAV
Trigger: TACGGCCTCCTCATGAAAGCCTTCACCATGAGCGCAGCCGAGACCGCAAGGCGCACCCGAGAGTTCCGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AGGATGGGCACATCGAACACCAGGCGTCGAAGCAGGTaGTGCAGCATGGACGGGCGGATATACCTGCACAGC +
Preference number: 6 (lower is better)
Translates to: RMGTSNTRRRSR*CSMDGRIYLHS
Trigger: GCTGTGCAGGTATATCCGCCCGTCCATGCTGCAGCACCTGCTTCGACGCCTGGTGTTCGATGTGCCCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TCAGGTACATACGACTGTGTGCGTGCCGGAGCAGGATaGCGTGGCCATACAAGAGTGTCCTGTGTCCCCCGC +
Preference number: 6 (lower is better)
Translates to: SGTYDCVRAGAG*RGHTRVSCVPR
Trigger: GCGGGGGACACAGGACACTCTTGTATGGCCACGCCATCCTGCTCCGGCACGCACACAGTCGTATGTACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GTGTGGGCCTTGCTGGCATCAACCACCACAAGGCCTTaGTCCTCAGTGAGCCCAAGGTACCTCCCTGTGGTC +
Preference number: 6 (lower is better)
Translates to: VWALLASTTTRP*SSVSPRYLPVV
Trigger: GACCACAGGGAGGTACCTTGGGCTCACTGAGGACCAAGGCCTTGTGGTGGTTGATGCCAGCAAGGCCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TACAGGCCGGCAGTGCTGTATATCATCCGGGCAGCCTaGGACTCCTCCTGCTGGCATCGCGTCAGTGACAAC +
Preference number: 6 (lower is better)
Translates to: YRPAVLYIIRAA*DSSCWHRVSDN
Trigger: GTTGTCACTGACGCGATGCCAGCAGGAGGAGTCCCAGGCTGCCCGGATGATATACAGCACTGCCGGCCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CTCCAGCACGCCGCGTGTCCACCTGTAGGAAGTGGTTaGGCATTCGGCTCCACGAGACAGGCATCAGCATCT +
Preference number: 6 (lower is better)
Translates to: LQHAACPPVGSG*AFGSTRQASAS
Trigger: AGATGCTGATGCCTGTCTCGTGGAGCCGAATGCCCAACCACTTCCTACAGGTGGACACGCGGCGTGCTGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCTCATGAGGCGGCTTCCCAGAGTGCTCTCCTCCTCTaGCTCCTCCTCCTCTCCCTCCAACTGGATTCCACA +
Preference number: 6 (lower is better)
Translates to: AHEAASQSALLL*LLLLSLQLDST
Trigger: TGTGGAATCCAGTTGGAGGGAGAGGAGGAGGAGCCAGAGGAGGAGAGCACTCTGGGAAGCCGCCTCATGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TGGGGACCCATCTGCACAATGAGCAGTGAGCGGATCTaGCCCAGGCACTCCAGCAGGCTCATGGTATCCTCC +
Preference number: 6 (lower is better)
Translates to: WGPICTMSSERI*PRHSSRLMVSS
Trigger: GGAGGATACCATGAGCCTGCTGGAGTGCCTGGGCCAGATCCGCTCACTGCTCATTGTGCAGATGGGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CTGCAGCTCCCGGGACAACGTAACCACGCTGAGGTCTaGTGGCTGGGGATTGTAGCCTTCTCGGGGGTCATA +
Preference number: 6 (lower is better)
Translates to: LQLPGQRNHAEV*WLGIVAFSGVI
Trigger: TATGACCCCCGAGAAGGCTACAATCCCCAGCCACCAGACCTCAGCGTGGTTACGTTGTCCCGGGAGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CTGCTAACCACAGCCTCCAGGTGGGCGATGAACTCCTaGGAGATGTCCATCCAGCGAAGCAGCTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LLTTASRWAMNS*EMSIQRSSCCR
Trigger: CCTGCAGCAGCTGCTTCGCTGGATGGACATCTCCCAGGAGTTCATCGCCCACCTGGAGGCTGTGGTTAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GATTTTCTCGGGATCATCGGCATCTTCCTCGCGGCCTaGGACGCCGCGGTACAGTGCCATTTGCCAGCGAAG +
Preference number: 6 (lower is better)
Translates to: DFLGIIGIFLAA*DAAVQCHLPAK
Trigger: CTTCGCTGGCAAATGGCACTGTACCGCGGCGTCCCAGGCCGCGAGGAAGATGCCGATGATCCCGAGAAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TGCGCGTTGCTGGTGGGTTCCAGAAAGCAAAGGCGGTaGCCGAACCCCTCAGCGGCCAGACACAACTTCAGC +
Preference number: 6 (lower is better)
Translates to: CALLVGSRKQRR*PNPSAARHNFS
Trigger: GCTGAAGTTGTGTCTGGCCGCTGAGGGGTTCGGCAACCGCCTTTGCTTTCTGGAACCCACCAGCAACGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GGTGTGGGCCTTGCTGGCATCAACCACCACAAGGCCTaGGTCCTCAGTGAGCCCAAGGTACCTCCCTGTGGT +
Preference number: 6 (lower is better)
Translates to: GVGLAGINHHKA*VLSEPKVPPCG
Trigger: ACCACAGGGAGGTACCTTGGGCTCACTGAGGACCAAGGCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TCTCCAGCACGCCGCGTGTCCACCTGTAGGAAGTGGTaGGGCATTCGGCTCCACGAGACAGGCATCAGCATC +
Preference number: 6 (lower is better)
Translates to: SPARRVSTCRKW*GIRLHETGISI
Trigger: GATGCTGATGCCTGTCTCGTGGAGCCGAATGCCCAACCACTTCCTACAGGTGGACACGCGGCGTGCTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GTCAGCAGGCCCGGTGGAGGGTCAGGTTTGCGCTCATaGTGGGCTGTGATCTCCAGAGAGGCCAGATCCATG +
Preference number: 6 (lower is better)
Translates to: VSRPGGGSGLRS*WAVISREARSM
Trigger: CATGGATCTGGCCTCTCTGGAGATCACAGCCCACAATGAGCGCAAACCTGACCCTCCACCGGGCCTGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CTGTGTCCCCCGCCCTGGGATGACCACTTATCCAAATaGAGGGCCTCCACACCGGCCTCCACAGTATTGGCC +
Preference number: 6 (lower is better)
Translates to: LCPPPWDDHLSK*RASTPASTVLA
Trigger: GGCCAATACTGTGGAGGCCGGTGTGGAGGCCCTCAATTTGGATAAGTGGTCATCCCAGGGCGGGGGACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS CAA 90 bp ATGATCCATGTCAGCAGGCCCGGTGGAGGGTCAGGTTTGCGCTCATaGTGGGCTGTGATCTCCAGAGAGGCCAGATCCATGCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: MIHVSRPGGGSGLRS*WAVISREARSMPSS
Trigger: GCTGCTGGGCATGGATCTGGCCTCTCTGGAGATCACAGCCCACAATGAGCGCAAACCTGACCCTCCACCGGGCCTGCTGACATGGATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp CTTAGGGTCTGGGGCAGCATAGGTGAGCCACAGGCCTaGGGCCACATGCTGTACAAAGCAGAGCGACTCTCC +
Preference number: 6 (lower is better)
Translates to: LRVWGSIGEPQA*GHMLYKAERLS
Trigger: GGAGAGTCGCTCTGCTTTGTACAGCATGTGGCCTCAGGCCTGTGGCTCACCTATGCTGCCCCAGACCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TCAGGTGGTCAAACATGGAGCGCTGGTTCTGCCGGCTaGTTCGGCAGAAGTAGCAGAGGAAGCGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SGGQTWSAGSAG*FGRSSRGSGSS
Trigger: GCTGCTGCCGCTTCCTCTGCTACTTCTGCCGAATCAGCCGGCAGAACCAGCGCTCCATGTTTGACCACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TGTGTCCCCCGCCCTGGGATGACCACTTATCCAAATTaGGGGCCTCCACACCGGCCTCCACAGTATTGGCCA +
Preference number: 6 (lower is better)
Translates to: CVPRPGMTTYPN*GPPHRPPQYWP
Trigger: TGGCCAATACTGTGGAGGCCGGTGTGGAGGCCCTCAATTTGGATAAGTGGTCATCCCAGGGCGGGGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS GCA 72 bp GGAGGTGGTGAGGCAACTCAGGTACATACGACTGTGTaGGTGCCGGAGCAGGATGGCGTGGCCATACAAGAG +
Preference number: 6 (lower is better)
Translates to: GGGEATQVHTTV*VPEQDGVAIQE
Trigger: CTCTTGTATGGCCACGCCATCCTGCTCCGGCACGCACACAGTCGTATGTACCTGAGTTGCCTCACCACCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CACTCTGCAAAGGCCGCCAAGGACTCCACCCGGTGCTaGAGCTCTTGGTCACAGAAATACTCCAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: HSAKAAKDSTRC*SSWSQKYSRRW
Trigger: CCACCTCCTGGAGTATTTCTGTGACCAAGAGCTGCAGCACCGGGTGGAGTCCTTGGCGGCCTTTGCAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TGGCCAGATCAGGGGGTACATTCTGCGCGTTGCTGGTaGGTTCCAGAAAGCAAAGGCGGTTGCCGAACCCCT +
Preference number: 6 (lower is better)
Translates to: WPDQGVHSARCW*VPESKGGCRTP
Trigger: AGGGGTTCGGCAACCGCCTTTGCTTTCTGGAACCCACCAGCAACGCGCAGAATGTACCCCCTGATCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TCTCGGCCCGGGAGCAAGTTCTCGGTGATGAGGTCCTaGTTGGAGCGTACAGCCACACCATTGCACACACAG +
Preference number: 6 (lower is better)
Translates to: SRPGSKFSVMRS*LERTATPLHTQ
Trigger: CTGTGTGTGCAATGGTGTGGCTGTACGCTCCAACCAGGACCTCATCACCGAGAACTTGCTCCCGGGCCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CAGCTCCCGGGACAACGTAACCACGCTGAGGTCTGGTaGCTGGGGATTGTAGCCTTCTCGGGGGTCATATGT +
Preference number: 6 (lower is better)
Translates to: QLPGQRNHAEVW*LGIVAFSGVIC
Trigger: ACATATGACCCCCGAGAAGGCTACAATCCCCAGCCACCAGACCTCAGCGTGGTTACGTTGTCCCGGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp AACCCCTCAGCGGCCAGACACAACTTCAGCTGTTCCTaGAGCACCGTGGCGCTGCACTGCAGGACCACTTCA +
Preference number: 6 (lower is better)
Translates to: NPSAARHNFSCS*STVALHCRTTS
Trigger: TGAAGTGGTCCTGCAGTGCAGCGCCACGGTGCTCAAGGAACAGCTGAAGTTGTGTCTGGCCGCTGAGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CGGCCCGGGAGCAAGTTCTCGGTGATGAGGTCCTGGTaGGAGCGTACAGCCACACCATTGCACACACAGAGT +
Preference number: 6 (lower is better)
Translates to: RPGSKFSVMRSW*ERTATPLHTQS
Trigger: ACTCTGTGTGTGCAATGGTGTGGCTGTACGCTCCAACCAGGACCTCATCACCGAGAACTTGCTCCCGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GTGGTGGTGTTGAGGATGATCTCAGGGTCGTCGCGGTaGTCAGCAGGTACCACATCTCGAGGGAGTCGGGGA +
Preference number: 6 (lower is better)
Translates to: VVVLRMISGSSR*SAGTTSRGSRG
Trigger: TCCCCGACTCCCTCGAGATGTGGTACCTGCTGACAACCGCGACGACCCTGAGATCATCCTCAACACCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp CCCCGTGGCTTCCCGCTGAAGCTATCGAGACCCTTTATGAACTGGTaGTACAGGCCGGCAGTGCTGTATATCATCCGGGCAGCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: PRGFPLKLSRPFMNW*YRPAVLYIIRAAWD
Trigger: GTCCCAGGCTGCCCGGATGATATACAGCACTGCCGGCCTGTACAACCAGTTCATAAAGGGTCTCGATAGCTTCAGCGGGAAGCCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp CACTGTCACCGCCCTGACTTTGCTGAGGTCGAAGCTCATGTCATGTaGATGGTAGTCAGGAGTGACCCAGCCCACCCACACGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: HCHRPDFAEVEAHVM*MVVRSDPAHPHAAG
Trigger: CCCAGCTGCGTGTGGGTGGGCTGGGTCACTCCTGACTACCATCAACATGACATGAGCTTCGACCTCAGCAAAGTCAGGGCGGTGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp TCGTGGGGCACATGCTCTGACAGGTTGGTAAGCAGCACCGCCACGTaGAAGCCAATGTCCCGTGCTGGTTCCTGGAAGCGGTTCGCAAAC +
Preference number: 6 (lower is better)
Translates to: SWGTCSDRLVSSTAT*KPMSRAGSWKRFAN
Trigger: GTTTGCGAACCGCTTCCAGGAACCAGCACGGGACATTGGCTTCAACGTGGCGGTGCTGCTTACCAACCTGTCAGAGCATGTGCCCCACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp GGTACATTCTGCGCGTTGCTGGTGGGTTCCAGAAAGCAAAGGCGGTaGCCGAACCCCTCAGCGGCCAGACACAACTTCAGCTGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GTFCALLVGSRKQRR*PNPSAARHNFSCSL
Trigger: CAAGGAACAGCTGAAGTTGTGTCTGGCCGCTGAGGGGTTCGGCAACCGCCTTTGCTTTCTGGAACCCACCAGCAACGCGCAGAATGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp AGTAGCCTTGGTGTGGGCCTTGCTGGCATCAACCACCACAAGGCCTaGGTCCTCAGTGAGCCCAAGGTACCTCCCTGTGGTCACATGTCT +
Preference number: 6 (lower is better)
Translates to: SSLGVGLAGINHHKA*VLSEPKVPPCGHMS
Trigger: AGACATGTGACCACAGGGAGGTACCTTGGGCTCACTGAGGACCAAGGCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACCAAGGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp AAAGGAGGCGTCAACCTGGAGCTCCCCACTTGCGGTTaGCAGGTGCAGGTATCGCTCAGAGGAGACACTCAC +
Preference number: 6 (lower is better)
Translates to: KGGVNLELPTCG*QVQVSLRGDTH
Trigger: GTGAGTGTCTCCTCTGAGCGATACCTGCACCTGTCAACCGCAAGTGGGGAGCTCCAGGTTGACGCCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp CCATGCCCACGTGGCAGCCCAGGGCCAGCAGAGTCTTaGGTGTCTCCCCTGACATCTGCAAGTTGTAATTCC +
Preference number: 6 (lower is better)
Translates to: PCPRGSPGPAES*VSPLTSASCNS
Trigger: GGAATTACAACTTGCAGATGTCAGGGGAGACACTCAAGACTCTGCTGGCCCTGGGCTGCCACGTGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TTGTGGTCAGGCACGAAGGATGCAGACATCTTCGGCTaGACCAGTGCGCCATCTTTGCCCAGGGTGGGGATC +
Preference number: 6 (lower is better)
Translates to: LWSGTKDADIFG*TSAPSLPRVGI
Trigger: GATCCCCACCCTGGGCAAAGATGGCGCACTGGTTCAGCCGAAGATGTCTGCATCCTTCGTGCCTGACCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GTGGTGAGGCAACTCAGGTACATACGACTGTGTGCGTaGCGGAGCAGGATGGCGTGGCCATACAAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: VVRQLRYIRLCA*RSRMAWPYKSV
Trigger: GACACTCTTGTATGGCCACGCCATCCTGCTCCGGCACGCACACAGTCGTATGTACCTGAGTTGCCTCACCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GGCCAAGAGGTGTTGTCCCGGAGAAGTCACTGGGCGTaGCACATGCCCTGTCCAAAGATGCAGCCCATCAAA +
Preference number: 6 (lower is better)
Translates to: GQEVLSRRSHWA*HMPCPKMQPIK
Trigger: TTTGATGGGCTGCATCTTTGGACAGGGCATGTGGCACGCCCAGTGACTTCTCCGGGACAACACCTCTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CAGCCAATGACAAGGTCTGTGTGGCTGATTCGGCCCTaGTGTCCGGGACTCACAAAATCTCCACCCCACACC +
Preference number: 6 (lower is better)
Translates to: QPMTRSVWLIRP*CPGLTKSPPHT
Trigger: GGTGTGGGGTGGAGATTTTGTGAGTCCCGGACAGCAGGGCCGAATCAGCCACACAGACCTTGTCATTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AAACTTCAGCAACTCCTGGGCCTTCTCTCGATCCCGTaGCTTCTCCTTGGCCGTGAGCGTGTCGTAGGGAAC +
Preference number: 6 (lower is better)
Translates to: KLQQLLGLLSIP*LLLGRERVVGN
Trigger: GTTCCCTACGACACGCTCACGGCCAAGGAGAAGGCACGGGATCGAGAGAAGGCCCAGGAGTTGCTGAAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CGAGGGAGTCGGGGAAGAGCCGGAGTGGAAGGTGGTTaGGTCATCATGGCAACCTTCTTGGCCTTGAACAAG +
Preference number: 6 (lower is better)
Translates to: RGSRGRAGVEGG*VIMATFLALNK
Trigger: CTTGTTCAAGGCCAAGAAGGTTGCCATGATGACCCAACCACCTTCCACTCCGGCTCTTCCCCGACTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCCAGATCCACCAGGCAGCCAATGACAAGGTCTGTGTaGCTGATTCGGCCCTGCTGTCCGGGACTCACAAAA +
Preference number: 6 (lower is better)
Translates to: ARSTRQPMTRSV*LIRPCCPGLTK
Trigger: TTTTGTGAGTCCCGGACAGCAGGGCCGAATCAGCCACACAGACCTTGTCATTGGCTGCCTGGTGGATCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCTTCCCCAGCTCAAACTGGACCACGTTCTGGTGGGTaGGCAGCACGAAGACAGCAGGAAACAGCTTCGTGT +
Preference number: 6 (lower is better)
Translates to: ASPAQTGPRSGG*AARRQQETASC
Trigger: ACACGAAGCTGTTTCCTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp AGAGCGTGCCAATATGTGAAGACAGTTGACCACAGCTaGGGCATCCGTCCCAAAGAGGGAGACTCGGTGGCG +
Preference number: 6 (lower is better)
Translates to: RACQYVKTVDHS*GIRPKEGDSVA
Trigger: CGCCACCGAGTCTCCCTCTTTGGGACGGATGCCCCAGCTGTGGTCAACTGTCTTCACATATTGGCACGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GCGTGGCCATACAAGAGTGTCCTGTGTCCCCCGCCCTaGGATGACCACTTATCCAAATTGAGGGCCTCCACA +
Preference number: 6 (lower is better)
Translates to: AWPYKSVLCPPP*DDHLSKLRAST
Trigger: TGTGGAGGCCCTCAATTTGGATAAGTGGTCATCCCAGGGCGGGGGACACAGGACACTCTTGTATGGCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS CAA 72 bp ACATGCTCTGACAGGTTGGTAAGCAGCACCGCCACGTaGAAGCCAATGTCCCGTGCTGGTTCCTGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: TCSDRLVSSTAT*KPMSRAGSWKR
Trigger: CCGCTTCCAGGAACCAGCACGGGACATTGGCTTCAACGTGGCGGTGCTGCTTACCAACCTGTCAGAGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp TCGATAGACATGATCCATGTCAGCAGGCCCGGTGGAGGGTCAGGTTaGCGCTCATTGTGGGCTGTGATCTCCAGAGAGGCCAGATCCATG +
Preference number: 6 (lower is better)
Translates to: SIDMIHVSRPGGGSG*RSLWAVISREARSM
Trigger: CATGGATCTGGCCTCTCTGGAGATCACAGCCCACAATGAGCGCAAACCTGACCCTCCACCGGGCCTGCTGACATGGATCATGTCTATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GGATGCCAGATGAGGCCTCCAGACGATCCAGCTTGCTaGCCAGCCAATCCAAGTTTGTGGAGAAGAGCGCAC +
Preference number: 6 (lower is better)
Translates to: GCQMRPPDDPAC*PANPSLWRRAH
Trigger: GTGCGCTCTTCTCCACAAACTTGGATTGGCTGGTCAGCAAGCTGGATCGTCTGGAGGCCTCATCTGGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp ATGAAGCAGCAGATGGCCAGATCAGGGGGTACATTCTaGGCGTTGCTGGTGGGTTCCAGAAAGCAAAGGCGG +
Preference number: 6 (lower is better)
Translates to: MKQQMARSGGTF*ALLVGSRKQRR
Trigger: CCGCCTTTGCTTTCTGGAACCCACCAGCAACGCGCAGAATGTACCCCCTGATCTGGCCATCTGCTGCTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CTCAAAGTACCATTTGCCATACTGCGTGGAGCCCTCTaGTCGGCCCACAAAGATGTTGGGGCGGATGCTGGT +
Preference number: 6 (lower is better)
Translates to: LKVPFAILRGAL*SAHKDVGADAG
Trigger: ACCAGCATCCGCCCCAACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAGTATGGCAAATGGTACTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GAGCCACCTCATCCACCATCACCTCAAAGTACCATTTaGCATACTGCGTGGAGCCCTCTGCTCGGCCCACAA +
Preference number: 6 (lower is better)
Translates to: EPPHPPSPQSTI*HTAWSPLLGPQ
Trigger: TTGTGGGCCGAGCAGAGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGGTGATGGTGGATGAGGTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GAATCAAAGATGCCCCAGAAGAGCTTGCGTGTGAGGTaGAGCTCTTCCTCAGAGGTGACCCCGAAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: ESKMPQKSLRVR*SSSSEVTPKLA
Trigger: GGCCAACTTCGGGGTCACCTCTGAGGAAGAGCTGCACCTCACACGCAAGCTCTTCTGGGGCATCTTTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp ACATGTCTGATTCTTAGTGGCTGGCCCCAGCGGAGATaGCTTCCACTCCAGCTGATTCTCAGCGGCTCTAGC +
Preference number: 6 (lower is better)
Translates to: TCLILSGWPQRR*LPLQLILSGSS
Trigger: GCTAGAGCCGCTGAGAATCAGCTGGAGTGGAAGCCATCTCCGCTGGGGCCAGCCACTAAGAATCAGACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CCACCATCACCTCAAAGTACCATTTGCCATACTGCGTaGAGCCCTCTGCTCGGCCCACAAAGATGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: PPSPQSTICHTA*SPLLGPQRCWG
Trigger: GCCCCAACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGGTGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp ATCTCGAGGGAGTCGGGGAAGAGCCGGAGTGGAAGGTaGTTGGGTCATCATGGCAACCTTCTTGGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: ISRESGKSRSGR*LGHHGNLLGLE
Trigger: TTCAAGGCCAAGAAGGTTGCCATGATGACCCAACCACCTTCCACTCCGGCTCTTCCCCGACTCCCTCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TTCTGCTTCCCCAGCTCAAACTGGACCACGTTCTGGTaGGTGGGCAGCACGAAGACAGCAGGAAACAGCTTC +
Preference number: 6 (lower is better)
Translates to: FCFPSSNWTTFW*VGSTKTAGNSF
Trigger: GAAGCTGTTTCCTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp TTCTTCTGCTTCCCCAGCTCAAACTGGACCACGTTCTaGTGGGTGGGCAGCACGAAGACAGCAGGAAACAGC +
Preference number: 6 (lower is better)
Translates to: FFCFPSSNWTTF*WVGSTKTAGNS
Trigger: GCTGTTTCCTGCTGTCTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAAGCAGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp AGCGGCATGATGTTCTTCTGCTTCCCCAGCTCAAACTaGACCACGTTCTGGTGGGTGGGCAGCACGAAGACA +
Preference number: 6 (lower is better)
Translates to: SGMMFFCFPSSN*TTFWWVGSTKT
Trigger: TGTCTTCGTGCTGCCCACCCACCAGAACGTGGTCCAGTTTGAGCTGGGGAAGCAGAAGAACATCATGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GGGCTGGCCGCAGTTTTTCCACATAGGGGTTCCTGGTaGTTCCCAGAGAGTAGATACTGCAGAGCGTTCGGT +
Preference number: 6 (lower is better)
Translates to: GLAAVFPHRGSW*FPESRYCRAFG
Trigger: ACCGAACGCTCTGCAGTATCTACTCTCTGGGAACCACCAGGAACCCCTATGTGGAAAAACTGCGGCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CCAGGGCTGGCCGCAGTTTTTCCACATAGGGGTTCCTaGTGGTTCCCAGAGAGTAGATACTGCAGAGCGTTC +
Preference number: 6 (lower is better)
Translates to: PGLAAVFPHRGS*WFPESRYCRAF
Trigger: GAACGCTCTGCAGTATCTACTCTCTGGGAACCACCAGGAACCCCTATGTGGAAAAACTGCGGCCAGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GAAGCCCCAGGATGGCCCGCTCTCGAGGAGACTTGGTaGTGTAGACAGAGCAGGCGTTGTATTCATTCAGCT +
Preference number: 6 (lower is better)
Translates to: EAPGWPALEETW*CRQSRRCIHSA
Trigger: AGCTGAATGAATACAACGCCTGCTCTGTCTACACCACCAAGTCTCCTCGAGAGCGGGCCATCCTGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TCGAGGGAGTCGGGGAAGAGCCGGAGTGGAAGGTGGTaGGGTCATCATGGCAACCTTCTTGGCCTTGAACAA +
Preference number: 6 (lower is better)
Translates to: SRESGKSRSGRW*GHHGNLLGLEQ
Trigger: TTGTTCAAGGCCAAGAAGGTTGCCATGATGACCCAACCACCTTCCACTCCGGCTCTTCCCCGACTCCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CGCCCTGACTTTGCTGAGGTCGAAGCTCATGTCATGTaGATGGTAGTCAGGAGTGACCCAGCCCACCCACAC +
Preference number: 6 (lower is better)
Translates to: RPDFAEVEAHVM*MVVRSDPAHPH
Trigger: GTGTGGGTGGGCTGGGTCACTCCTGACTACCATCAACATGACATGAGCTTCGACCTCAGCAAAGTCAGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp TCCTTGGAGATTCGGAAGCAAAAGGAAGTAGCCTTGGTGTGGGCCTaGCTGGCATCAACCACCACAAGGCCTTGGTCCTCAGTGAGCCCA +
Preference number: 6 (lower is better)
Translates to: SLEIRKQKEVALVWA*LASTTTRPWSSVSP
Trigger: TGGGCTCACTGAGGACCAAGGCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACCAAGGCTACTTCCTTTTGCTTCCGAATCTCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp TACCACATCTCGAGGGAGTCGGGGAAGAGCCGGAGTGGAAGGTGGTaGGGTCATCATGGCAACCTTCTTGGCCTTGAACAAGAACCCTCT +
Preference number: 6 (lower is better)
Translates to: YHISRESGKSRSGRW*GHHGNLLGLEQEPS
Trigger: AGAGGGTTCTTGTTCAAGGCCAAGAAGGTTGCCATGATGACCCAACCACCTTCCACTCCGGCTCTTCCCCGACTCCCTCGAGATGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CTTCTTCTTTCGCCCCCAAGTGTTGTGGTAATTTTCTaGCAGTTGTTCGGCCATGGCCTGCAGCTCCCGGGA +
Preference number: 6 (lower is better)
Translates to: LLLSPPSVVVIF*QLFGHGLQLPG
Trigger: TCCCGGGAGCTGCAGGCCATGGCCGAACAACTGGCAGAAAATTACCACAACACTTGGGGGCGAAAGAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AACTCCTGGGAGATGTCCATCCAGCGAAGCAGCTGCTaGAGGAAGCCGAAGGCAAATCGCTTCTCAATGGAG +
Preference number: 6 (lower is better)
Translates to: NSWEMSIQRSSC*RKPKANRFSME
Trigger: CTCCATTGAGAAGCGATTTGCCTTCGGCTTCCTGCAGCAGCTGCTTCGCTGGATGGACATCTCCCAGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GATGAAGATTTCTCCCACCATCCTGAACAGCTCCTCTaGATTGGGGTTGGGCTCTGTCAGCCAGTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: DEDFSHHPEQLL*IGVGLCQPVCP
Trigger: AGGGCACACTGGCTGACAGAGCCCAACCCCAATGCAGAGGAGCTGTTCAGGATGGTGGGAGAAATCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp ACATTGGACGAAGACTCCACGAGCATGTCCACCATCTaGCGCGCGATCATACCGTTCACCACGTTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: TLDEDSTSMSTI*RAIIPFTTFPS
Trigger: GGAAGGAAACGTGGTGAACGGTATGATCGCGCGGCAGATGGTGGACATGCTCGTGGAGTCTTCGTCCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GACATCGATAGACATGATCCATGTCAGCAGGCCCGGTaGAGGGTCAGGTTTGCGCTCATTGTGGGCTGTGAT +
Preference number: 6 (lower is better)
Translates to: DIDRHDPCQQAR*RVRFALIVGCD
Trigger: ATCACAGCCCACAATGAGCGCAAACCTGACCCTCCACCGGGCCTGCTGACATGGATCATGTCTATCGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TCCAGGATGCCAGATGAGGCCTCCAGACGATCCAGCTaGCTGACCAGCCAATCCAAGTTTGTGGAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: SRMPDEASRRSS*LTSQSKFVEKS
Trigger: GCTCTTCTCCACAAACTTGGATTGGCTGGTCAGCAAGCTGGATCGTCTGGAGGCCTCATCTGGCATCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CTCTTGCTAAACCAGGTGGTAACTGGGCGTTGCATGTaGATGGCGAACGGCTCAAAGCCTTCCTGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LLLNQVVTGRCM*MANGSKPSWRP
Trigger: TGGCCTCCAGGAAGGCTTTGAGCCGTTCGCCATCAACATGCAACGCCCAGTTACCACCTGGTTTAGCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CCATACACTCGGTCCAGGAAAAGCACCATGGATGCCTaGTGGTCAGGCACGAAGGATGCAGACATCTTCGGC +
Preference number: 6 (lower is better)
Translates to: PYTRSRKSTMDA*WSGTKDADIFG
Trigger: GCCGAAGATGTCTGCATCCTTCGTGCCTGACCACAAGGCATCCATGGTGCTTTTCCTGGACCGAGTGTATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CCGGTGCAGGGTCCCTGGATGTACTCGGTGAGGCTGTaGAACACTTGTTTAGCTACCGACATGGCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: PVQGPWMYSVRL*NTCLATDMALE
Trigger: CTCCAAAGCCATGTCGGTAGCTAAACAAGTGTTCAACAGCCTCACCGAGTACATCCAGGGACCCTGCACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp GCCTCCCCTGTTGCGTCTTCCTGTAATCCCACGTCAAAGGCCAACTaGTCAGTCATGGATCGGGAGGTGGTGAGGCAACTCAGGTACATA +
Preference number: 6 (lower is better)
Translates to: ASPVASSCNPTSKAN*SVMDREVVRQLRYI
Trigger: TATGTACCTGAGTTGCCTCACCACCTCCCGATCCATGACTGACAAGTTGGCCTTTGACGTGGGATTACAGGAAGACGCAACAGGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp ACATCCAGCTTCTCCTTGGAGATTCGGAAGCAAAAGGAAGTAGCCTaGGTGTGGGCCTTGCTGGCATCAACCACCACAAGGCCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: TSSFSLEIRKQKEVA*VWALLASTTTRPWS
Trigger: GGACCAAGGCCTTGTGGTGGTTGATGCCAGCAAGGCCCACACCAAGGCTACTTCCTTTTGCTTCCGAATCTCCAAGGAGAAGCTGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp TACAACACCTCCAGGATGCCAGATGAGGCCTCCAGACGATCCAGCTaGCTGACCAGCCAATCCAAGTTTGTGGAGAAGAGCGCACAGTTG +
Preference number: 6 (lower is better)
Translates to: YNTSRMPDEASRRSS*LTSQSKFVEKSAQL
Trigger: CAACTGTGCGCTCTTCTCCACAAACTTGGATTGGCTGGTCAGCAAGCTGGATCGTCTGGAGGCCTCATCTGGCATCCTGGAGGTGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp AGTCCTCTGAGGGAACCCGCGTCCAAACATGTTCATCATGGGTACTaGGCACGGGAGTCTTCTGAGCCAGCTTCATCATCATGTGCGCGA +
Preference number: 6 (lower is better)
Translates to: SPLREPASKHVHHGY*ARESSEPASSSCAR
Trigger: TCGCGCACATGATGATGAAGCTGGCTCAGAAGACTCCCGTGCCAAGTACCCATGATGAACATGTTTGGACGCGGGTTCCCTCAGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS TCA 72 bp CCTCCTCTCCCTCCTCCTCCACCTCTTCTTCCTCCCTaGAGACTTCAGGCTCAATCATCTTCAGGATCTGCT +
Preference number: 6 (lower is better)
Translates to: PPLPPPPPLLPP*RLQAQSSSGSA
Trigger: AGCAGATCCTGAAGATGATTGAGCCTGAAGTCTTCAGGGAGGAAGAAGAGGTGGAGGAGGAGGGAGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp ATCACCGTTCTGGCATCTAGAGAGCGTGCCAATATGTaGAGACAGTTGACCACAGCTGGGGCATCCGTCCCA +
Preference number: 6 (lower is better)
Translates to: ITVLASRERANM*RQLTTAGASVP
Trigger: TGGGACGGATGCCCCAGCTGTGGTCAACTGTCTTCACATATTGGCACGCTCTCTAGATGCCAGAACGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TATCTTTCAGGGCATAGCGGGCTTTGGCCAGCACAATaGGGTCCTGGTCGGTGGGAGCACACATGTTTAGTC +
Preference number: 6 (lower is better)
Translates to: YLSGHSGLWPAQ*GPGRWEHTCLV
Trigger: GACTAAACATGTGTGCTCCCACCGACCAGGACCTCATTGTGCTGGCCAAAGCCCGCTATGCCCTGAAAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GCCGCGGTACAGTGCCATTTGCCAGCGAAGAGATGGTaGGCCTTCCACCTTTCCCTGAAGGTTAAGGTTGTT +
Preference number: 6 (lower is better)
Translates to: AAVQCHLPAKRW*AFHLSLKVKVV
Trigger: AACAACCTTAACCTTCAGGGAAAGGTGGAAGGCTCACCATCTCTTCGCTGGCAAATGGCACTGTACCGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TTTCCCCGCCCTCCTCCAGGTGGCAGCTCTTTGCCATaGTGTCAGCGTAAGCCATGTATAGGTAGTCTTCGT +
Preference number: 6 (lower is better)
Translates to: FPRPPPGGSSLP*CQRKPCIGSLR
Trigger: ACGAAGACTACCTATACATGGCTTACGCTGACATCATGGCAAAGAGCTGCCACCTGGAGGAGGGCGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp AGGAGCCCTACGGTCATCACCAGCTGCTTTCCATTGTaGGTGACAGATGAAAGGATGGTGCGGAGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: RSPTVITSCFPL*VTDERMVRSVL
Trigger: CAAGACGCTCCGCACCATCCTTTCATCTGTCACTCACAATGGAAAGCAGCTGGTGATGACCGTAGGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CAGCCAGAGCAGATGGGATTCATGTTCCACAGAGTCTaGATAAAGGAGGCGTCAACCTGGAGCTCCCCACTT +
Preference number: 6 (lower is better)
Translates to: QPEQMGFMFHRV*IKEASTWSSPL
Trigger: AAGTGGGGAGCTCCAGGTTGACGCCTCCTTTATGCAGACTCTGTGGAACATGAATCCCATCTGCTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AAGAGCCCATCGAGGTTGAAGGATTCAAAGACACCCTaGACGGGGCAGCCGTTGATACGAAAGGAGATGGAC +
Preference number: 6 (lower is better)
Translates to: KSPSRLKDSKTP*TGQPLIRKEMD
Trigger: GTCCATCTCCTTTCGTATCAACGGCTGCCCCGTGCAGGGTGTCTTTGAATCCTTCAACCTCGATGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GGAAGACTCTTGCTAAACCAGGTGGTAACTGGGCGTTaGATGTTGATGGCGAACGGCTCAAAGCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: GRLLLNQVVTGR*MLMANGSKPSW
Trigger: CCAGGAAGGCTTTGAGCCGTTCGCCATCAACATGCAACGCCCAGTTACCACCTGGTTTAGCAAGAGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp AAGCACCATGGATGCCTTGTGGTCAGGCACGAAGGATaGAGACATCTTCGGCTGAACCAGTGCGCCATCTTT +
Preference number: 6 (lower is better)
Translates to: KHHGCLVVRHEG*RHLRLNQCAIF
Trigger: AAAGATGGCGCACTGGTTCAGCCGAAGATGTCTGCATCCTTCGTGCCTGACCACAAGGCATCCATGGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp ATGAACTCCTGGGAGATGTCCATCCAGCGAAGCAGCTaGTGCAGGAAGCCGAAGGCAAATCGCTTCTCAATG +
Preference number: 6 (lower is better)
Translates to: MNSWEMSIQRSS*CRKPKANRFSM
Trigger: CATTGAGAAGCGATTTGCCTTCGGCTTCCTGCAGCAGCTGCTTCGCTGGATGGACATCTCCCAGGAGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CCAGGTGATAGAGCACTGCGGACACTTCCTGAACTCTaGGCACGATTTTCTCGGGATCATCGGCATCTTCCT +
Preference number: 6 (lower is better)
Translates to: PGDRALRTLPEL*ARFSRDHRHLP
Trigger: AGGAAGATGCCGATGATCCCGAGAAAATCGTGCGCAGAGTTCAGGAAGTGTCCGCAGTGCTCTATCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GTAAGGATGCTCCGTCTGGTCCAGGTGATAGAGCACTaGGGACACTTCCTGAACTCTGCGCACGATTTTCTC +
Preference number: 6 (lower is better)
Translates to: VRMLRLVQVIEH*GHFLNSAHDFL
Trigger: GAGAAAATCGTGCGCAGAGTTCAGGAAGTGTCCGCAGTGCTCTATCACCTGGACCAGACGGAGCATCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp ATGTTCCACAGAGTCTGCATAAAGGAGGCGTCAACCTaGAGCTCCCCACTTGCGGTTGACAGGTGCAGGTAT +
Preference number: 6 (lower is better)
Translates to: MFHRVCIKEAST*SSPLAVDRCRY
Trigger: ATACCTGCACCTGTCAACCGCAAGTGGGGAGCTCCAGGTTGACGCCTCCTTTATGCAGACTCTGTGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CCATTTTTGAAGTGCAATAGCATGTTGATCTGCTCCTaGGGTGGAGAACGGAACTCTCGGGTGCGCCTTGCG +
Preference number: 6 (lower is better)
Translates to: PFLKCNSMLICS*GGERNSRVRLA
Trigger: CGCAAGGCGCACCCGAGAGTTCCGTTCTCCACCCCAGGAGCAGATCAACATGCTATTGCACTTCAAAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GTTGCGTCTTCCTGTAATCCCACGTCAAAGGCCAACTaGTCAGTCATGGATCGGGAGGTGGTGAGGCAACTC +
Preference number: 6 (lower is better)
Translates to: VASSCNPTSKAN*SVMDREVVRQL
Trigger: GAGTTGCCTCACCACCTCCCGATCCATGACTGACAAGTTGGCCTTTGACGTGGGATTACAGGAAGACGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TTGGTAAGGAGCTTGAGTGGCATCTTGGCGAACTCATaGAGGATGGGCACATCGAACACCAGGCGTCGAAGC +
Preference number: 6 (lower is better)
Translates to: LVRSLSGILANS*RMGTSNTRRRS
Trigger: GCTTCGACGCCTGGTGTTCGATGTGCCCATCCTCAATGAGTTCGCCAAGATGCCACTCAAGCTCCTTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TCGTCATCCGCCATGACTTTCTCTCCGTTTTGGCGATaGATGACAGTTCCGTCCTCGTTCACCATGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SSSAMTFSPFWR*MTVPSSFTMPS
Trigger: GCTGGGCATGGTGAACGAGGACGGAACTGTCATCAATCGCCAAAACGGAGAGAAAGTCATGGCGGATGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp GTCAGAAATGGAGCCACCTCATCCACCATCACCTCAAAGTACCATTaGCCATACTGCGTGGAGCCCTCTGCTCGGCCCACAAAGATGTTG +
Preference number: 6 (lower is better)
Translates to: VRNGATSSTITSKYH*PYCVEPSARPTKML
Trigger: CAACATCTTTGTGGGCCGAGCAGAGGGCTCCACGCAGTATGGCAAATGGTACTTTGAGGTGATGGTGGATGAGGTGGCTCCATTTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp CCATTGCTCATCATATACGTCTTAGGCAGCTTCGTCTTCTTCAGGTaGTCTTCTGCCTTCTCATCTGCCATGCCCACGTGGCAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: PLLIIYVLGSFVFFR*SSAFSSAMPTWQPR
Trigger: CCTGGGCTGCCACGTGGGCATGGCAGATGAGAAGGCAGAAGACAACCTGAAGAAGACGAAGCTGCCTAAGACGTATATGATGAGCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp CGGAAGGCTGTTTCCGAGCCCGAGTCAGACATGAGGACCTCGCCATaGAGGGTGAAGATGATGGTGTTCTCTGTGAGATCAATCATGCAG +
Preference number: 6 (lower is better)
Translates to: RKAVSEPESDMRTSP*RVKMMVFSVRSIMQ
Trigger: CTGCATGATTGATCTCACAGAGAACACCATCATCTTCACCCTCAATGGCGAGGTCCTCATGTCTGACTCGGGCTCGGAAACAGCCTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp CGTCCAGTTTGCTCTTTTCAGTTAGAGCTGTGCGGCTaGAGTGTAGGACCAACTGGTGTAAGGGGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: RPVCSFQLELCG*SVGPTGVRGLA
Trigger: AGCCAGACCCCTTACACCAGTTGGTCCTACACTTCAGCCGCACAGCTCTAACTGAAAAGAGCAAACTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp ACATGTTCATCATGGGTACTTGGCACGGGAGTCTTCTaGGCCAGCTTCATCATCATGTGCGCGAACACGTGC +
Preference number: 6 (lower is better)
Translates to: TCSSWVLGTGVF*ASFIIMCANTC
Trigger: GCACGTGTTCGCGCACATGATGATGAAGCTGGCTCAGAAGACTCCCGTGCCAAGTACCCATGATGAACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS GCA 72 bp ATAGAGCAGGTTCACAATCTCTTTCCAAGATTCAGCTaGCTCCTCTCCCGCAAACTCGGCAAAGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: IEQVHNLFPRFS*LLSRKLGKVGS
Trigger: GCTGCCCACTTTGCCGAGTTTGCGGGAGAGGAGGCAGCTGAATCTTGGAAAGAGATTGTGAACCTGCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CATCCCGTACCGGACCATAGGTCCATCCTTGCTCAATaGGAGTCAGTGCCCAGAGTTCATGAATGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: HPVPDHRSILAQ*ESVPRVHECSL
Trigger: CAGAGAACATTCATGAACTCTGGGCACTGACTCGCATTGAGCAAGGATGGACCTATGGTCCGGTACGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp TCATTTCCTTCTCCTTGTTGGAGGCATGGCCACCACTaGCCAGCACTTTGGCTGGTGTGGATAGGAAGTAGA +
Preference number: 6 (lower is better)
Translates to: SFPSPCWRHGHH*PALWLVWIGSR
Trigger: TCTACTTCCTATCCACACCAGCCAAAGTGCTGGGCAGTGGTGGCCATGCCTCCAACAAGGAGAAGGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp TTTTGGAAATCATTGTTGTGCCCCTCGCAGAGCAGCTaGAGGAAGCGGAACAGGTCCTGTGTGAACTCGTCA +
Preference number: 6 (lower is better)
Translates to: FWKSLLCPSQSS*RKRNRSCVNSS
Trigger: TGACGAGTTCACACAGGACCTGTTCCGCTTCCTGCAGCTGCTCTGCGAGGGGCACAACAATGATTTCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp ATGTTCCCAATGCTCTGGATCATAAGGTTCTCCTCCTaGGGACCCATCTGCACAATGAGCAGTGAGCGGATC +
Preference number: 6 (lower is better)
Translates to: MFPMLWIIRFSS*GPICTMSSERI
Trigger: GATCCGCTCACTGCTCATTGTGCAGATGGGTCCCCAGGAGGAGAACCTTATGATCCAGAGCATTGGGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp AGGAACCCCACATCCAGCACATGCAGCAAGAAGTCCTaGTTCTCAATGCCATACACTCGGTCCAGGAAAAGC +
Preference number: 6 (lower is better)
Translates to: RNPTSSTCSKKS*FSMPYTRSRKS
Trigger: GCTTTTCCTGGACCGAGTGTATGGCATTGAGAACCAGGACTTCTTGCTGCATGTGCTGGATGTGGGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TTCCCGCTGAAGCTATCGAGACCCTTTATGAACTGGTaGTACAGGCCGGCAGTGCTGTATATCATCCGGGCA +
Preference number: 6 (lower is better)
Translates to: FPLKLSRPFMNW*YRPAVLYIIRA
Trigger: TGCCCGGATGATATACAGCACTGCCGGCCTGTACAACCAGTTCATAAAGGGTCTCGATAGCTTCAGCGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GTTTCCGAGCCCGAGTCAGACATGAGGACCTCGCCATaGAGGGTGAAGATGATGGTGTTCTCTGTGAGATCA +
Preference number: 6 (lower is better)
Translates to: VSEPESDMRTSP*RVKMMVFSVRS
Trigger: TGATCTCACAGAGAACACCATCATCTTCACCCTCAATGGCGAGGTCCTCATGTCTGACTCGGGCTCGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp AGGAAGACTCTTGCTAAACCAGGTGGTAACTGGGCGTaGCATGTTGATGGCGAACGGCTCAAAGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RKTLAKPGGNWA*HVDGERLKAFL
Trigger: CAGGAAGGCTTTGAGCCGTTCGCCATCAACATGCAACGCCCAGTTACCACCTGGTTTAGCAAGAGTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GGAGCACACATGTTTAGTCCGATCGGCAACATCTTCTaGAGTGTGGCCACGATCAAGGATGTCTGCACGGAG +
Preference number: 6 (lower is better)
Translates to: GAHMFSPIGNIF*SVATIKDVCTE
Trigger: CTCCGTGCAGACATCCTTGATCGTGGCCACACTCAAGAAGATGTTGCCGATCGGACTAAACATGTGTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp AGGGAACCCGCGTCCAAACATGTTCATCATGGGTACTaGGCACGGGAGTCTTCTGAGCCAGCTTCATCATCA +
Preference number: 6 (lower is better)
Translates to: REPASKHVHHGY*ARESSEPASSS
Trigger: TGATGATGAAGCTGGCTCAGAAGACTCCCGTGCCAAGTACCCATGATGAACATGTTTGGACGCGGGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214374.2
CDS CAA 90 bp CGGATCTCTTCAGGGAGAGGACACTCTTCCTCATCAGCACCATTTTaGAAGTGCAATAGCATGTTGATCTGCTCCTGGGGTGGAGAACGG +
Preference number: 6 (lower is better)
Translates to: RISSGRGHSSSSAPF*KCNSMLICSWGGER
Trigger: CCGTTCTCCACCCCAGGAGCAGATCAACATGCTATTGCACTTCAAAAATGGTGCTGATGAGGAAGAGTGTCCTCTCCCTGAAGAGATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp ACCTTTTCCAGGTCTTGCTCTTGTAATGCCAAGGCTAGCTCGTTGTaGTCAATGACAGAAGCAGCAGCTACATCCAAGGGTGTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: TFSRSCSCNAKASSL*SMTEAAATSKGVEP
Trigger: GGGCTCCACACCCTTGGATGTAGCTGCTGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGCATTACAAGAGCAAGACCTGGAAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GGATTCCACAATGTGCCAGCAGGTCTTGGTGAAAGTTaGCTAACTCCTGTCGGATCTCTTCAGGGAGAGGAC +
Preference number: 6 (lower is better)
Translates to: GFHNVPAGLGES*LTPVGSLQGED
Trigger: GTCCTCTCCCTGAAGAGATCCGACAGGAGTTAGTCAACTTTCACCAAGACCTGCTGGCACATTGTGGAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TCTTCTTCACCAGCTTTACTTTTTCCAACAAGCTCATaGGGCGGCTTCCCAGAGTGCTCTCCTCCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: SSSPALLFPTSS*GGFPECSPPLA
Trigger: AGCCAGAGGAGGAGAGCACTCTGGGAAGCCGCCTCATGAGCTTGTTGGAAAAAGTAAAGCTGGTGAAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GCTCTTGTAATGCCAAGGCTAGCTCGTTGTTGTCAATaGCAGAAGCAGCAGCTACATCCAAGGGTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: ALVMPRLARCCQ*QKQQLHPRVWS
Trigger: GCTCCACACCCTTGGATGTAGCTGCTGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGCATTACAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp GAGCACACATGTTTAGTCCGATCGGCAACATCTTCTTaGGTGTGGCCACGATCAAGGATGTCTGCACGGAGT +
Preference number: 6 (lower is better)
Translates to: EHTCLVRSATSS*VWPRSRMSARS
Trigger: ACTCCGTGCAGACATCCTTGATCGTGGCCACACTCAAGAAGATGTTGCCGATCGGACTAAACATGTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CCAAGTTTGTGGAGAAGAGCGCACAGTTGGTGCGATTaGCACGGATCAGAGAGGCTAGAAGTTCATAGAGCA +
Preference number: 6 (lower is better)
Translates to: PSLWRRAHSWCD*HGSERLEVHRA
Trigger: TGCTCTATGAACTTCTAGCCTCTCTGATCCGTGGCAATCGCACCAACTGTGCGCTCTTCTCCACAAACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp GCCAATCCAAGTTTGTGGAGAAGAGCGCACAGTTGGTaGGATTGCCACGGATCAGAGAGGCTAGAAGTTCAT +
Preference number: 6 (lower is better)
Translates to: ANPSLWRRAHSW*DCHGSERLEVH
Trigger: ATGAACTTCTAGCCTCTCTGATCCGTGGCAATCGCACCAACTGTGCGCTCTTCTCCACAAACTTGGATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CATCCAGCACATGCAGCAAGAAGTCCTGGTTCTCAATaGCATACACTCGGTCCAGGAAAAGCACCATGGATG +
Preference number: 6 (lower is better)
Translates to: HPAHAARSPGSQ*HTLGPGKAPWM
Trigger: CATCCATGGTGCTTTTCCTGGACCGAGTGTATGGCATTGAGAACCAGGACTTCTTGCTGCATGTGCTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GTGAACTCGTCATCCGCCATGACTTTCTCTCCGTTTTaGCGATTGATGACAGTTCCGTCCTCGTTCACCATG +
Preference number: 6 (lower is better)
Translates to: VNSSSAMTFSPF*RLMTVPSSFTM
Trigger: CATGGTGAACGAGGACGGAACTGTCATCAATCGCCAAAACGGAGAGAAAGTCATGGCGGATGACGAGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp CTTGTTGTCATCCCGTACCGGACCATAGGTCCATCCTaGCTCAATGCGAGTCAGTGCCCAGAGTTCATGAAT +
Preference number: 6 (lower is better)
Translates to: LVVIPYRTIGPS*LNASQCPEFMN
Trigger: ATTCATGAACTCTGGGCACTGACTCGCATTGAGCAAGGATGGACCTATGGTCCGGTACGGGATGACAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TCGAAGGCCCACTTCTCATGGGTGTACTCTGCGAACTaGTTAATGAAGGAGTCCAGCTTCTCGGGGATGATG +
Preference number: 6 (lower is better)
Translates to: SKAHFSWVYSAN*LMKESSFSGMM
Trigger: CATCATCCCCGAGAAGCTGGACTCCTTCATTAACAAGTTCGCAGAGTACACCCATGAGAAGTGGGCCTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp AGTTTACAGAAGAGGCTGGTGATCATTTCCTTCTCCTaGTTGGAGGCATGGCCACCACTGCCCAGCACTTTG +
Preference number: 6 (lower is better)
Translates to: SLQKRLVIISFS*LEAWPPLPSTL
Trigger: CAAAGTGCTGGGCAGTGGTGGCCATGCCTCCAACAAGGAGAAGGAAATGATCACCAGCCTCTTCTGTAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TCCAACTGGATTCCACAATGTGCCAGCAGGTCTTGGTaGAAGTTGACTAACTCCTGTCGGATCTCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: SNWIPQCASRSW*KLTNSCRISSG
Trigger: CCCTGAAGAGATCCGACAGGAGTTAGTCAACTTTCACCAAGACCTGCTGGCACATTGTGGAATCCAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS GCA 72 bp CACCCTGCCAGGTATGACACAACCTTTTCCAGGTCTTaGTCTTGTAATGCCAAGGCTAGCTCGTTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: HPARYDTTFSRS*SCNAKASSLLS
Trigger: TGACAACAACGAGCTAGCCTTGGCATTACAAGAGCAAGACCTGGAAAAGGTTGTGTCATACCTGGCAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CCTGATCTGAGCCACCTGACTGTACGTCTCCTGCCTTaGCCATTTTGCTCTTATTGTCAGCTGTCAAAAAGG +
Preference number: 6 (lower is better)
Translates to: PDLSHLTVRLLP*PFCSYCQLSKR
Trigger: CCTTTTTGACAGCTGACAATAAGAGCAAAATGGCCAAGGCAGGAGACGTACAGTCAGGTGGCTCAGATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp GGAGTGGAAGGTGGTTGGGTCATCATGGCAACCTTCTaGGCCTTGAACAAGAACCCTCTCTTCTTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: GVEGGWVIMATF*ALNKNPLFLFF
Trigger: GAAGAACAAGAAGAGAGGGTTCTTGTTCAAGGCCAAGAAGGTTGCCATGATGACCCAACCACCTTCCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp AGAGTAGATACTGCAGAGCGTTCGGTAGCAAGACACTaGTACGTCATCCAGGATGACATCGTCTCCGAACTG +
Preference number: 6 (lower is better)
Translates to: RVDTAERSVARH*YVIQDDIVSEL
Trigger: CAGTTCGGAGACGATGTCATCCTGGATGACGTACAAGTGTCTTGCTACCGAACGCTCTGCAGTATCTACTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TGTGAACTCGTCATCCGCCATGACTTTCTCTCCGTTTaGGCGATTGATGACAGTTCCGTCCTCGTTCACCAT +
Preference number: 6 (lower is better)
Translates to: CELVIRHDFLSV*AIDDSSVLVHH
Trigger: ATGGTGAACGAGGACGGAACTGTCATCAATCGCCAAAACGGAGAGAAAGTCATGGCGGATGACGAGTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp ACAACCTTTTCCAGGTCTTGCTCTTGTAATGCCAAGGCTAGCTCGTaGTTGTCAATGACAGAAGCAGCAGCTACATCCAAGGGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: TTFSRSCSCNAKASS*LSMTEAAATSKGVE
Trigger: CTCCACACCCTTGGATGTAGCTGCTGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGCATTACAAGAGCAAGACCTGGAAAAGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp TACTCGGTGAGGCTGTTGAACACTTGTTTAGCTACCGACATGGCTTaGGAGAAGTTTCTCTTTCCCTGTTCCTCGATGACATCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: YSVRLLNTCLATDMA*EKFLFPCSSMTSLP
Trigger: GGGCAAGGATGTCATCGAGGAACAGGGAAAGAGAAACTTCTCCAAAGCCATGTCGGTAGCTAAACAAGTGTTCAACAGCCTCACCGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS TCA 72 bp TCCATTCCCAGGCAATCATGGCCTTCAAAGACTCCTTaGTGGGCCAACGGTAAATCTCTTTGTCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: SIPRQSWPSKTP*WANGKSLCPSL
Trigger: CAGAGAAGGACAAAGAGATTTACCGTTGGCCCATCAAGGAGTCTTTGAAGGCCATGATTGCCTGGGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp AGGTCTTGCTCTTGTAATGCCAAGGCTAGCTCGTTGTaGTCAATGACAGAAGCAGCAGCTACATCCAAGGGT +
Preference number: 6 (lower is better)
Translates to: RSCSCNAKASSL*SMTEAAATSKG
Trigger: ACCCTTGGATGTAGCTGCTGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGCATTACAAGAGCAAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TCCAGGTCTTGCTCTTGTAATGCCAAGGCTAGCTCGTaGTTGTCAATGACAGAAGCAGCAGCTACATCCAAG +
Preference number: 6 (lower is better)
Translates to: SRSCSCNAKASS*LSMTEAAATSK
Trigger: CTTGGATGTAGCTGCTGCTTCTGTCATTGACAACAACGAGCTAGCCTTGGCATTACAAGAGCAAGACCTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 90 bp AAAGAGTTGTCTGTGAAGATGACTCCAAACTTCCAGATCTGGTATTaGACATCGATAGACATGATCCATGTCAGCAGGCCCGGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: KELSVKMTPNFQIWY*TSIDMIHVSRPGGG
Trigger: CCCTCCACCGGGCCTGCTGACATGGATCATGTCTATCGATGTCAAATACCAGATCTGGAAGTTTGGAGTCATCTTCACAGACAACTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CAAGTCTGCGTTGATCATCACTGTCAGAAGGGGAGATaGTCAAACATTCATCCATATGTCCATGAAAGAGGC +
Preference number: 6 (lower is better)
Translates to: QVCVDHHCQKGR*SNIHPYVHERG
Trigger: GCCTCTTTCATGGACATATGGATGAATGTTTGACCATCTCCCCTTCTGACAGTGATGATCAACGCAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp CAGAATCTTAGCAAAGAATTTAATCTCCTGTTCATGTaGGGATTTCTCCACCCGTCCACTGCTAACCACAGC +
Preference number: 6 (lower is better)
Translates to: QNLSKEFNLLFM*GFLHPSTANHS
Trigger: GCTGTGGTTAGCAGTGGACGGGTGGAGAAATCCCCACATGAACAGGAGATTAAATTCTTTGCTAAGATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CAA 72 bp TCTGTGAAGATGACTCCAAACTTCCAGATCTGGTATTaGACATCGATAGACATGATCCATGTCAGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SVKMTPNFQIWY*TSIDMIHVSRP
Trigger: GGGCCTGCTGACATGGATCATGTCTATCGATGTCAAATACCAGATCTGGAAGTTTGGAGTCATCTTCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2
CDS CCA 72 bp GAGTTGTCTGTGAAGATGACTCCAAACTTCCAGATCTaGTATTTGACATCGATAGACATGATCCATGTCAGC +
Preference number: 6 (lower is better)
Translates to: ELSVKMTPNFQI*YLTSIDMIHVS
Trigger: GCTGACATGGATCATGTCTATCGATGTCAAATACCAGATCTGGAAGTTTGGAGTCATCTTCACAGACAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032813.10
ENSMUST00000179893.9
ENSMUST00000214374.2