Pregenerated sensors for RYBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072872Ensembl transcript IDs: ENSMUST00000101118.4
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAACGCAGCCCACGACAGCCGAGACAGGGCGGCCAGGAACATCTaGCTGCTTAGACTCCACCACTGCAGTTTCTACCTCAAGGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: PNAAHDSRDRAARNI*LLRLHHCSFYLKAS Trigger: ACTTGCCTTGAGGTAGAAACTGCAGTGGTGGAGTCTAAGCAGTCAGATGTTCCTGGCCGCCCTGTCTCGGCTGTCGTGGGCTGCGTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 90 bp | CTCTCCTGGGAAGTGAGCTTTCCCCGCAACTCGCCCATGCACCCCTaGGATCCTTTCCCACACAAGGAACTAAGAACTGACTCCAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LSWEVSFPRNSPMHP*DPFPHKELRTDSRD Trigger: GTCTCTGGAGTCAGTTCTTAGTTCCTTGTGTGGGAAAGGATCGCAGGGGTGCATGGGCGAGTTGCGGGGAAAGCTCACTTCCCAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 90 bp | TATTCTCGTGGGTGTCAAGATGTCTTTTCCCCCTTCCCAACTGCATaGCTCGGGCAGAGCATGTCAGCTCAGCTGTGTGTGTGCACACGA | + |
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Preference number: 1 (lower is better) Translates to: YSRGCQDVFSPFPTA*LGQSMSAQLCVCTR Trigger: TCGTGTGCACACACACAGCTGAGCTGACATGCTCTGCCCGAGTCATGCAGTTGGGAAGGGGGAAAAGACATCTTGACACCCACGAGAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 90 bp | GTGTCAAGAGTAACTGTCAGGGTACGAAATTCCTTGGTAGCCAGATaGCCACGGCAAGCGGAACCTCTCCTGGTAGCGTCACTACAAGGT | + |
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Preference number: 1 (lower is better) Translates to: VSRVTVRVRNSLVAR*PRQAEPLLVASLQG Trigger: ACCTTGTAGTGACGCTACCAGGAGAGGTTCCGCTTGCCGTGGGCATCTGGCTACCAAGGAATTTCGTACCCTGACAGTTACTCTTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 90 bp | ATAGGAATTCCATTTCCAGAATGCATGCCTGAGGATGGCATTGTGTaGCACCTATCACCTCTCTATCCCAACGCAGCCCACGACAGCCGA | + |
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Preference number: 1 (lower is better) Translates to: IGIPFPECMPEDGIV*HLSPLYPNAAHDSR Trigger: TCGGCTGTCGTGGGCTGCGTTGGGATAGAGAGGTGATAGGTGCCACACAATGCCATCCTCAGGCATGCATTCTGGAAATGGAATTCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 90 bp | CATGATCACAAAATCCACCACTGCAACACCACAGAGGATGTAGACTaGTTCCCTGGGTGGTGTGGATTCAAAGATGCACTACCGCAACCC | + |
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Preference number: 1 (lower is better) Translates to: HDHKIHHCNTTEDVD*FPGWCGFKDALPQP Trigger: GGGTTGCGGTAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCTGTGGTGTTGCAGTGGTGGATTTTGTGATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 90 bp | CACTACAAGGTCGTCCACAGAAGACTCTCCAGGGTGCAAGCAGCATaGGCAGGTGGAGGGTTTGAATCTCATACCCTGATTCATAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: HYKVVHRRLSRVQAA*AGGGFESHTLIHSF Trigger: GAAACTATGAATCAGGGTATGAGATTCAAACCCTCCACCTGCCCATGCTGCTTGCACCCTGGAGAGTCTTCTGTGGACGACCTTGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 90 bp | CAAGAGTTCAGTCAACAAAGAACACCTACTATTCATTCACTCTCCTaGGAAGTGAGCTTTCCCCGCAACTCGCCCATGCACCCCTGCGAT | + |
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Preference number: 1 (lower is better) Translates to: QEFSQQRTPTIHSLS*EVSFPRNSPMHPCD Trigger: ATCGCAGGGGTGCATGGGCGAGTTGCGGGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTGACTGAACTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 90 bp | ACCGCAACCCTAGAACTAAGACAGCTGCTAGATATACCTCAGGCGTaGGCAGAGGTCTGGAAAAAGGCCGGAATTCGAGATACAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: TATLELRQLLDIPQA*AEVWKKAGIRDTEH Trigger: GTGTTCTGTATCTCGAATTCCGGCCTTTTTCCAGACCTCTGCTCACGCCTGAGGTATATCTAGCAGCTGTCTTAGTTCTAGGGTTGCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 90 bp | CAAAATCCACCACTGCAACACCACAGAGGATGTAGACTGCTTCCCTaGGTGGTGTGGATTCAAAGATGCACTACCGCAACCCTAGAACTA | + |
|
Preference number: 1 (lower is better) Translates to: QNPPLQHHRGCRLLP*VVWIQRCTTATLEL Trigger: TAGTTCTAGGGTTGCGGTAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCTGTGGTGTTGCAGTGGTGGATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 90 bp | TGCGATCCTTTCCCACACAAGGAACTAAGAACTGACTCCAGAGACTaGAAGATCTCTGTGTCAGGTCTGGATGTGAGGTTGACAACCCTT | + |
|
Preference number: 1 (lower is better) Translates to: CDPFPHKELRTDSRD*KISVSGLDVRLTTL Trigger: AAGGGTTGTCAACCTCACATCCAGACCTGACACAGAGATCTTCCAGTCTCTGGAGTCAGTTCTTAGTTCCTTGTGTGGGAAAGGATCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 90 bp | TCTGGAGCTAGTCTTGTTACTTCCGAATGGTCAAAGCCCTCCAACTaGACCACTTGTCATTTGTCAATTAGCCCATTGCAAATGCAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: SGASLVTSEWSKPSN*TTCHLSISPLQMQA Trigger: AGCCTGCATTTGCAATGGGCTAATTGACAAATGACAAGTGGTTCAGTTGGAGGGCTTTGACCATTCGGAAGTAACAAGACTAGCTCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 90 bp | CAAAGCCCTCCAACTGAACCACTTGTCATTTGTCAATTAGCCCATTaGAAATGCAGGCTATCTGGAGCAGTCTTTAAATTTGAGATCACA | + |
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Preference number: 1 (lower is better) Translates to: QSPPTEPLVICQLAH*KCRLSGAVFKFEIT Trigger: TGTGATCTCAAATTTAAAGACTGCTCCAGATAGCCTGCATTTGCAATGGGCTAATTGACAAATGACAAGTGGTTCAGTTGGAGGGCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 90 bp | CCTCCAACTGAACCACTTGTCATTTGTCAATTAGCCCATTGCAAATaGAGGCTATCTGGAGCAGTCTTTAAATTTGAGATCACATTGTTT | + |
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Preference number: 1 (lower is better) Translates to: PPTEPLVICQLAHCK*RLSGAVFKFEITLF Trigger: AAACAATGTGATCTCAAATTTAAAGACTGCTCCAGATAGCCTGCATTTGCAATGGGCTAATTGACAAATGACAAGTGGTTCAGTTGGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAAGCGTCTGCCAATGTTTGAAGACTCTCCAGGGTaGAAGCAGCATGGGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GRRDILVELNSQKRLPMFEDSPG*KQHGQV Trigger: CACCTGCCCATGCTGCTTGCACCCTGGAGAGTCTTC...AAACATTGGCAGACGCTTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CAA 90 bp | TTAAAAAGAGGGGAGCATTGTCCATGCGTCGAGAACAGGAGCCCATaGACAAATAGCACTGCCTTTGTGGACAGACTCCGGCGCATCGAA | + |
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Preference number: 2 (lower is better) Translates to: LKRGEHCPCVENRSP*TNSTAFVDRLRRIE Trigger: TTCGATGCGCCGGAGTCTGTCCACAAAGGCAGTGCTATTTGTCAATGGGCTCCTGTTCTCGACGCATGGACAATGCTCCCCTCTTTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CAA 90 bp | GAATACATAAAAGTGTCAAGAGTAACTGTCAGGGTACGAAATTCCTaGGTAGCCAGATGCCCACGGCAAGCGGAACCTCTCCTGGTAGCG | + |
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Preference number: 2 (lower is better) Translates to: EYIKVSRVTVRVRNS*VARCPRQAEPLLVA Trigger: CGCTACCAGGAGAGGTTCCGCTTGCCGTGGGCATCTGGCTACCAAGGAATTTCGTACCCTGACAGTTACTCTTGACACTTTTATGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR GCA 90 bp | CACAAAATCCACCACTGCAACACCACAGAGGATGTAGACTGCTTCCCTGGGTGGTGTCAATTAGCCCATTaGAAATGCAGGCTATCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HKIHHCNTTEDVDCFPGWCQLAH*KCRLSG Trigger: TCCAGATAGCCTGCATTTGCAATGGGCTAATTGACA...CCACCCAGGGAAGCAGTCTACATCCTCTGTGGTGTTGCAGTGGTGGATTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCAACAAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTGAGCTTTCCCGGCAGGTGGAGGGTTTaGATCTCATACCCTGATTCA | + |
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Preference number: 2 (lower is better) Translates to: SQQRTPTIHSLSWEVSFPGRWRV*ISYPDS Trigger: TGAATCAGGGTATGAGATTCAAACCCTCCACCTGCC...GGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCAACAAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTGAGCTTTCCCGATATACCTCAGGCGTaGGCAGAGGTCTGGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SQQRTPTIHSLSWEVSFPDIPQA*AEVWKK Trigger: CTTTTTCCAGACCTCTGCTCACGCCTGAGGTATATC...GGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR TCA 90 bp | AGAATGGTCTTAATAAGGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAATCATGGAGGCAAAACTaGAAACCCAAGACACCAGCG | + |
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Preference number: 2 (lower is better) Translates to: RMVLIRQARHLSGAKLTESWRQN*KPKTPA Trigger: CGCTGGTGTCTTGGGTTTTCAGTTTTGCCTCCATGA...TTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCCTTATTAAGACCATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR GCA 90 bp | AGTCAACAAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTGAGCTTTCCCTTAGCCCATTGCAAATaGAGGCTATCTGGAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SQQRTPTIHSLSWEVSFPLAHCK*RLSGAV Trigger: GACTGCTCCAGATAGCCTGCATTTGCAATGGGCTAA...GGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR CCA 90 bp | GTAACCATAATTTACACGAATACTTGGCATTCTGGAGCTAGTCTTGTTACTTCCAGGGTGCAAGCAGCATaGGCAGGTGGAGGGTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: VTIIYTNTWHSGASLVTSRVQAA*AGGGFE Trigger: TTCAAACCCTCCACCTGCCCATGCTGCTTGCACCCT...GGAAGTAACAAGACTAGCTCCAGAATGCCAAGTATTCGTGTAAATTATGGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR GCA 90 bp | AGAATGGTCTTAATAAGGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAAAAGGTAAGTACAGCTTaGATCCCAGACACAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: RMVLIRQARHLSGAKLTEKVSTA*IPDTST Trigger: AGTGCTTGTGTCTGGGATGCAAGCTGTACTTACCTT...TTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCCTTATTAAGACCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR CCA 90 bp | GTACACAGTGTTTCTGAACAAAGTGCATACCAACACTTATTGGTTCAAAGAGCAGACTGCTTCCCTGGGTaGTGTGGATTCAAAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: VHSVSEQSAYQHLLVQRADCFPG*CGFKDA Trigger: TGCATCTTTGAATCCACACCACCCAGGGAAGCAGTC...TGCTCTTTGAACCAATAAGTGTTGGTATGCACTTTGTTCAGAAACACTGTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAATGATAAAGTGGCTTCTAATAACAGTCGTGCACATGCCAATAACAGGATACTCTAAAGACAGATaGGAGAGTCAAGTTCCCACG | + |
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Preference number: 2 (lower is better) Translates to: RKMIKWLLITVVHMPITGYSKDR*ESQVPT Trigger: CGTGGGAACTTGACTCTCTCATCTGTCTTTAGAGTA...TCCTGTTATTGGCATGTGCACGACTGTTATTAGAAGCCACTTTATCATTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAATGATAAAGTGGCTTCTAATAACAGTCGTGCACATGCCAATAACAGGATCAAAGCCCTCCAACTaGACCACTTGTCATTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RKMIKWLLITVVHMPITGSKPSN*TTCHLS Trigger: TGACAAATGACAAGTGGTTCAGTTGGAGGGCTTTGA...TCCTGTTATTGGCATGTGCACGACTGTTATTAGAAGCCACTTTATCATTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR GCA 90 bp | TTACTTCCGAATGGTCAAAGCCCTCCAACTGAACCACTTGTCATTTGTCAATTAATCAAGCACCAGCGTTaGCATGGATTGGTTTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LLPNGQSPPTEPLVICQLIKHQR*HGLVSN Trigger: ATTTGAAACCAATCCATGGCAACGCTGGTGCTTGAT...TAATTGACAAATGACAAGTGGTTCAGTTGGAGGGCTTTGACCATTCGGAAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAATGATAAAGTGGCTTCTAATAACAGTCGTGCACATGCCAATAACAGGAGCAGTGCAATCCACATaGATTTGGTGGCATTTAATT | + |
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Preference number: 2 (lower is better) Translates to: RKMIKWLLITVVHMPITGAVQST*IWWHLI Trigger: AATTAAATGCCACCAAATTCATGTGGATTGCACTGC...TCCTGTTATTGGCATGTGCACGACTGTTATTAGAAGCCACTTTATCATTTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 72 bp | GCCCACGACAGCCGAGACAGGGCGGCCAGGAACATCTaGCTGCTTAGACTCCACCACTGCAGTTTCTACCTC | + |
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Preference number: 3 (lower is better) Translates to: AHDSRDRAARNI*LLRLHHCSFYL Trigger: GAGGTAGAAACTGCAGTGGTGGAGTCTAAGCAGTCAGATGTTCCTGGCCGCCCTGTCTCGGCTGTCGTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 72 bp | GTAACTGTCAGGGTACGAAATTCCTTGGTAGCCAGATaGCCACGGCAAGCGGAACCTCTCCTGGTAGCGTCA | + |
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Preference number: 3 (lower is better) Translates to: VTVRVRNSLVAR*PRQAEPLLVAS Trigger: TGACGCTACCAGGAGAGGTTCCGCTTGCCGTGGGCATCTGGCTACCAAGGAATTTCGTACCCTGACAGTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 72 bp | GAAGTGAGCTTTCCCCGCAACTCGCCCATGCACCCCTaGGATCCTTTCCCACACAAGGAACTAAGAACTGAC | + |
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Preference number: 3 (lower is better) Translates to: EVSFPRNSPMHP*DPFPHKELRTD Trigger: GTCAGTTCTTAGTTCCTTGTGTGGGAAAGGATCGCAGGGGTGCATGGGCGAGTTGCGGGGAAAGCTCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 72 bp | TCGTGGGTGTCAAGATGTCTTTTCCCCCTTCCCAACTaGATGACTCGGGCAGAGCATGTCAGCTCAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SWVSRCLFPLPN*MTRAEHVSSAV Trigger: CACAGCTGAGCTGACATGCTCTGCCCGAGTCATGCAGTTGGGAAGGGGGAAAAGACATCTTGACACCCACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 72 bp | AAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTaGGCTTTCCCCGCAACTCGCCCATGCACCCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: KEHLLFIHSPGK*AFPATRPCTPA Trigger: CGCAGGGGTGCATGGGCGAGTTGCGGGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 72 bp | GTCGTCCACAGAAGACTCTCCAGGGTGCAAGCAGCATaGGCAGGTGGAGGGTTTGAATCTCATACCCTGATT | + |
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Preference number: 3 (lower is better) Translates to: VVHRRLSRVQAA*AGGGFESHTLI Trigger: AATCAGGGTATGAGATTCAAACCCTCCACCTGCCCATGCTGCTTGCACCCTGGAGAGTCTTCTGTGGACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 72 bp | CCACTGCAACACCACAGAGGATGTAGACTGCTTCCCTaGGTGGTGTGGATTCAAAGATGCACTACCGCAACC | + |
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Preference number: 3 (lower is better) Translates to: PLQHHRGCRLLP*VVWIQRCTTAT Trigger: GGTTGCGGTAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCTGTGGTGTTGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 72 bp | CCATTTCCAGAATGCATGCCTGAGGATGGCATTGTGTaGCACCTATCACCTCTCTATCCCAACGCAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: PFPECMPEDGIV*HLSPLYPNAAH Trigger: GTGGGCTGCGTTGGGATAGAGAGGTGATAGGTGCCACACAATGCCATCCTCAGGCATGCATTCTGGAAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 72 bp | CACCACAGAGGATGTAGACTGCTTCCCTGGGTGGTGTaGATTCAAAGATGCACTACCGCAACCCTAGAACTA | + |
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Preference number: 3 (lower is better) Translates to: HHRGCRLLPWVV*IQRCTTATLEL Trigger: TAGTTCTAGGGTTGCGGTAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCTGTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 72 bp | AGAAAGACTAACAACTGCATTGGTAGGGTGAGGATTTaGAGGACGGGGTACGGGAGGAGGAGTAAAACAGGC | + |
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Preference number: 3 (lower is better) Translates to: RKTNNCIGRVRI*RTGYGRRSKTG Trigger: GCCTGTTTTACTCCTCCTCCCGTACCCCGTCCTCCAAATCCTCACCCTACCAATGCAGTTGTTAGTCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 72 bp | AGTCAACAAAGAACACCTACTATTCATTCACTCTCCTaGGAAGTGAGCTTTCCCCGCAACTCGCCCATGCAC | + |
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Preference number: 3 (lower is better) Translates to: SQQRTPTIHSLS*EVSFPRNSPMH Trigger: GTGCATGGGCGAGTTGCGGGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 72 bp | CTAGAACTAAGACAGCTGCTAGATATACCTCAGGCGTaGGCAGAGGTCTGGAAAAAGGCCGGAATTCGAGAT | + |
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Preference number: 3 (lower is better) Translates to: LELRQLLDIPQA*AEVWKKAGIRD Trigger: ATCTCGAATTCCGGCCTTTTTCCAGACCTCTGCTCACGCCTGAGGTATATCTAGCAGCTGTCTTAGTTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 72 bp | AAAATCCACCACTGCAACACCACAGAGGATGTAGACTaGTTCCCTGGGTGGTGTGGATTCAAAGATGCACTA | + |
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Preference number: 3 (lower is better) Translates to: KIHHCNTTEDVD*FPGWCGFKDAL Trigger: TAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCTGTGGTGTTGCAGTGGTGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR CCA 72 bp | TTCCCACACAAGGAACTAAGAACTGACTCCAGAGACTaGAAGATCTCTGTGTCAGGTCTGGATGTGAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: FPHKELRTDSRD*KISVSGLDVRL Trigger: CAACCTCACATCCAGACCTGACACAGAGATCTTCCAGTCTCTGGAGTCAGTTCTTAGTTCCTTGTGTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAAGCGTCTGCCAATGTTTTATCAAGCACCAGCGTaGCCATGGATTGGTTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: GRRDILVELNSQKRLPMFYQAPA*PWIGFK Trigger: TTTGAAACCAATCCATGGCAACGCTGGTGCTTGATA...AAACATTGGCAGACGCTTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 72 bp | GAAGCTAATAGGAATTCCATTTCCAGAATGCATGCCTaGGGATGGCATTGTGTGGCACCTATCACCTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: EANRNSISRMHA*GWHCVAPITSL Trigger: TAGAGAGGTGATAGGTGCCACACAATGCCATCCTCAGGCATGCATTCTGGAAATGGAATTCCTATTAGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 72 bp | AGTCTTGTTACTTCCGAATGGTCAAAGCCCTCCAACTaGACCACTTGTCATTTGTCAATTAGCCCATTGCAA | + |
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Preference number: 3 (lower is better) Translates to: SLVTSEWSKPSN*TTCHLSISPLQ Trigger: TTGCAATGGGCTAATTGACAAATGACAAGTGGTTCAGTTGGAGGGCTTTGACCATTCGGAAGTAACAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR TCA 72 bp | AGAGATACCCTGAATCTAAGAGCAAAGCAGAGTCACTaGGACTTGGGATGGGATGATAAACTATTATCAGTG | + |
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Preference number: 3 (lower is better) Translates to: RDTLNLRAKQSH*DLGWDDKLLSV Trigger: CACTGATAATAGTTTATCATCCCATCCCAAGTCTCAGTGACTCTGCTTTGCTCTTAGATTCAGGGTATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR-3UTR CAA 90 bp | GTAACCATAATTTACACGAATACTTGGCATTCTGGAGCTAGTCTTGTTACTTCCTTGTCAATTAGCCCATaGCAAATGCAGGCTATCTGG | + |
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Preference number: 3 (lower is better) Translates to: VTIIYTNTWHSGASLVTSLSISP*QMQAIW Trigger: CCAGATAGCCTGCATTTGCAATGGGCTAATTGACAA...GGAAGTAACAAGACTAGCTCCAGAATGCCAAGTATTCGTGTAAATTATGGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| 3UTR GCA 72 bp | GAACCACTTGTCATTTGTCAATTAGCCCATTGCAAATaGAGGCTATCTGGAGCAGTCTTTAAATTTGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: EPLVICQLAHCK*RLSGAVFKFEI Trigger: GATCTCAAATTTAAAGACTGCTCCAGATAGCCTGCATTTGCAATGGGCTAATTGACAAATGACAAGTGGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| 3UTR GCA 72 bp | CCAACTGAACCACTTGTCATTTGTCAATTAGCCCATTaGAAATGCAGGCTATCTGGAGCAGTCTTTAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: PTEPLVICQLAH*KCRLSGAVFKF Trigger: AAATTTAAAGACTGCTCCAGATAGCCTGCATTTGCAATGGGCTAATTGACAAATGACAAGTGGTTCAGTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| 3UTR GCA 72 bp | GTTGTATTCACTTCACAGTGTATCAAGCACCAGCGTTaGCATGGATTGGTTTCAAATAACCCTTTATATATA | + |
|
Preference number: 3 (lower is better) Translates to: VVFTSQCIKHQR*HGLVSNNPLYI Trigger: TATATATAAAGGGTTATTTGAAACCAATCCATGGCAACGCTGGTGCTTGATACACTGTGAAGTGAATACAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CCA 90 bp | CACAAAATCCACCACTGCAACACCACAGAGGATGTAGACTGCTTCCCTGGGTGGTGCGAGGTTTCCTGGTaGAGGTGCCTTTCCGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HKIHHCNTTEDVDCFPGWCEVSW*RCLSAH Trigger: ATGTGCGGAAAGGCACCTCCACCAGGAAACCTCGCA...CCACCCAGGGAAGCAGTCTACATCCTCTGTGGTGTTGCAGTGGTGGATTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR TCA 90 bp | GTGCAAGCAGCATGGGCAGGTGGAGGGTTTGAATCTCATACCCTGATTCATAGTCTTCAGCCGGGGCCTTaGGGTGTGGTTTGTTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQAAWAGGGFESHTLIHSLQPGP*GVVCFA Trigger: AGCGAAACAAACCACACCTCAAGGCCCCGGCTGAAG...ACTATGAATCAGGGTATGAGATTCAAACCCTCCACCTGCCCATGCTGCTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAAGCGTCTGCCAATGTTTCTGGTTCTGCTGTTCTaGCCCTGCACTGGAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRRDILVELNSQKRLPMFLVLLF*PCTGGH Trigger: GTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAG...AAACATTGGCAGACGCTTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR TCA 90 bp | AGAGGATGTAGACTGCTTCCCTGGGTGGTGTGGATTCAAAGATGCACTACCGCATTTGTCTGTGCTCTCTaGGCCCGAGCTGCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGCRLLPWVVWIQRCTTAFVCAL*ARAALV Trigger: AACCAGAGCAGCTCGGGCTCAGAGAGCACAGACAAA...TGCGGTAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | CACAAAATCCACCACTGCAACACCACAGAGGATGTAGACTGCTTCCCTGGGTGGTACTGCCAACTGCTGTaGGGTGCTCCTGTCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: HKIHHCNTTEDVDCFPGWYCQLL*GAPVHI Trigger: AATGTGGACAGGAGCACCGCACAGCAGTTGGCAGTA...CCACCCAGGGAAGCAGTCTACATCCTCTGTGGTGTTGCAGTGGTGGATTTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGGTGTGGATTCAAAGATGCACTACCGCAACCCTAGAACTAAGACAGCTGAGCCCGAGCTGCTCTaGTTCTGCTGTTCTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGGVDSKMHYRNPRTKTAEPELL*FCCSDP Trigger: AGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGCTC...AGCTGTCTTAGTTCTAGGGTTGCGGTAGTGCATCTTTGAATCCACACCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAAGCGTCTGCCAATGTTTTGCTGTGCCACCAGCTaGGAATTGATGCGAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRRDILVELNSQKRLPMFCCATS*ELMRGF Trigger: GAAACCTCGCATCAATTCTCAGCTGGTGGCACAGCA...AAACATTGGCAGACGCTTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | AGTCAACAAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTGAGCTTTCCCAGTGGCGTACTGCTGTaGCACCTGCTGTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQQRTPTIHSLSWEVSFPSGVLL*HLLCHQ Trigger: CTGGTGGCACAGCAGGTGGCACAGCAGTACGCCACT...GGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGATGTAGACTGCTTCCCTGGGTGGTGTGGATTCAAAGATGCACTACCGCACTGTGGAAGAGGATGTaGAGGAGGAGCGAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGCRLLPWVVWIQRCTTALWKRM*RRSESF Trigger: AAAAGACTCGCTCCTCCTCCACATCCTCTTCCACAG...TGCGGTAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CCA 90 bp | AGAATGGTCTTAATAAGGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAATGTCGCCCTTTGGCGTaGAGGAGCGGGAGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RMVLIRQARHLSGAKLTECRPLA*RSGRSL Trigger: AAGGCTCCTCCCGCTCCTCCACGCCAAAGGGCGACA...TTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCCTTATTAAGACCATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR TCA 90 bp | GTGCAAGCAGCATGGGCAGGTGGAGGGTTTGAATCTCATACCCTGATTCATAGTTTCATCATTCACTGCTaGCATGTCGCCCTTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VQAAWAGGGFESHTLIHSFIIHC*HVALWR Trigger: ACGCCAAAGGGCGACATGTCAGCAGTGAATGATGAA...ACTATGAATCAGGGTATGAGATTCAAACCCTCCACCTGCCCATGCTGCTTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTGTTACTTCCGAATGGTCAAAGCCCTCCAACTGAACCACTTGTCATTTGTAGGAGCCTTTGTCTGTaGTCTCTGAGCCCGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLLPNGQSPPTEPLVICRSLCL*SLSPSC Trigger: GCAGCTCGGGCTCAGAGAGCACAGACAAAGGCTCCT...ACAAATGACAAGTGGTTCAGTTGGAGGGCTTTGACCATTCGGAAGTAACAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| 3UTR CAA 72 bp | GAATTCCATTTCCAGAATGCATGCCTGAGGATGGCATaGTGTGGCACCTATCACCTCTCTATCCCAACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFHFQNACLRMA*CGTYHLSIPTQ Trigger: CTGCGTTGGGATAGAGAGGTGATAGGTGCCACACAATGCCATCCTCAGGCATGCATTCTGGAAATGGAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CCA 90 bp | AGTCAACAAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTGAGCTTTCCCCTTGTCTTTTTGGCCTaGTCGGGCTCTTCTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SQQRTPTIHSLSWEVSFPLVFLA*SGSSCR Trigger: GCGACAAGAAGAGCCCGACCAGGCCAAAAAGACAAG...GGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | AGAATGGTCTTAATAAGGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAACTGTGCCACCTGCTGTaGCACCAGCTGAGAATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RMVLIRQARHLSGAKLTELCHLL*HQLRID Trigger: ATCAATTCTCAGCTGGTGGCACAGCAGGTGGCACAG...TTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCCTTATTAAGACCATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR TCA 90 bp | GTACACAGTGTTTCTGAACAAAGTGCATACCAACACTTATTGGTTCAAAGAGCACCACCAGCTGAGAATTaGTGCGAGGTTTCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSVSEQSAYQHLLVQRAPPAEN*CEVSWW Trigger: CCACCAGGAAACCTCGCATCAATTCTCAGCTGGTGG...TGCTCTTTGAACCAATAAGTGTTGGTATGCACTTTGTTCAGAAACACTGTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | GTACACAGTGTTTCTGAACAAAGTGCATACCAACACTTATTGGTTCAAAGAGCAACAGTTACTGCCAACTaGTGTGCGGTGCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHSVSEQSAYQHLLVQRATVTAN*CAVLLS Trigger: GGACAGGAGCACCGCACAGCAGTTGGCAGTAACTGT...TGCTCTTTGAACCAATAAGTGTTGGTATGCACTTTGTTCAGAAACACTGTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | AGGAAAATGATAAAGTGGCTTCTAATAACAGTCGTGCACATGCCAATAACAGGAGTTGCCCACAGTTACTaGCAACTGCTGTGCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKMIKWLLITVVHMPITGVAHSY*QLLCGA Trigger: AGCACCGCACAGCAGTTGGCAGTAACTGTGGGCAAC...TCCTGTTATTGGCATGTGCACGACTGTTATTAGAAGCCACTTTATCATTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | AGGAAAATGATAAAGTGGCTTCTAATAACAGTCGTGCACATGCCAATAACAGGAGAGCTGCTCTGGTTCTaGTGTTCTGACCCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RKMIKWLLITVVHMPITGELLWF*CSDPAL Trigger: CAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTC...TCCTGTTATTGGCATGTGCACGACTGTTATTAGAAGCCACTTTATCATTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CCA 90 bp | GTACACAGTGTTTCTGAACAAAGTGCATACCAACACTTATTGGTTCAAAGAGCAGTTCTGACCCTGCACTaGAGGTCACTGTGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSVSEQSAYQHLLVQRAVLTLH*RSLWKR Trigger: CCTCTTCCACAGTGACCTCCAGTGCAGGGTCAGAAC...TGCTCTTTGAACCAATAAGTGTTGGTATGCACTTTGTTCAGAAACACTGTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | GTAACCATAATTTACACGAATACTTGGCATTCTGGAGCTAGTCTTGTTACTTCCCCAAAAGCCTTCGTCTaGGGCAGGTTTCGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTIIYTNTWHSGASLVTSPKAFV*GRFRLS Trigger: AGACAAGCGAAACCTGCCGCAGACGAAGGCTTTTGG...GGAAGTAACAAGACTAGCTCCAGAATGCCAAGTATTCGTGTAAATTATGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR GCA 90 bp | GTACACAGTGTTTCTGAACAAAGTGCATACCAACACTTATTGGTTCAAAGAGCACCAACTGCTGTGCGGTaGTCCTGTCCACATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHSVSEQSAYQHLLVQRAPTAVR*SCPHSS Trigger: TGAAGAATGTGGACAGGAGCACCGCACAGCAGTTGG...TGCTCTTTGAACCAATAAGTGTTGGTATGCACTTTGTTCAGAAACACTGTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CCA 90 bp | AGGAAAATGATAAAGTGGCTTCTAATAACAGTCGTGCACATGCCAATAACAGGACGGGGCCTTGAGGTGTaGTTTGTTTCGCTGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKMIKWLLITVVHMPITGRGLEV*FVSLVF Trigger: AAAGACCAGCGAAACAAACCACACCTCAAGGCCCCG...TCCTGTTATTGGCATGTGCACGACTGTTATTAGAAGCCACTTTATCATTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 90 bp | ACATGTCGCCCTTTGGCGTGGAGGAGCGGGAGGAGCCTTTGTCTGTaGTCTCTGAGCCCGAGCTGCTCTGGTTCTGCTGTTCTGACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TCRPLAWRSGRSLCL*SLSPSCSGSAVLTL Trigger: CAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGCTCAGAGAGCACAGACAAAGGCTCCTCCCGCTCCTCCACGCCAAAGGGCGACATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 90 bp | CTTCTTAGGGGGAGGTGGAGTGGCGTACTGCTGTGCCACCTGCTGTaGCACCAGCTGAGAATTGATGCGAGGTTTCCTGGTGGAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRGRWSGVLLCHLL*HQLRIDARFPGGGA Trigger: GGCACCTCCACCAGGAAACCTCGCATCAATTCTCAGCTGGTGGCACAGCAGGTGGCACAGCAGTACGCCACTCCACCTCCCCCTAAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS CCA 90 bp | GAGCGGGAGGAGCCTTTGTCTGTGCTCTCTGAGCCCGAGCTGCTCTaGTTCTGCTGTTCTGACCCTGCACTGGAGGTCACTGTGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EREEPLSVLSEPELL*FCCSDPALEVTVEE Trigger: CTCTTCCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGCTCAGAGAGCACAGACAAAGGCTCCTCCCGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 90 bp | GAGGAGCCTTTGTCTGTGCTCTCTGAGCCCGAGCTGCTCTGGTTCTaGTGTTCTGACCCTGCACTGGAGGTCACTGTGGAAGAGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: EEPLSVLSEPELLWF*CSDPALEVTVEEDV Trigger: CACATCCTCTTCCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGCTCAGAGAGCACAGACAAAGGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 90 bp | CTCCTTCTTCTCCTTCTTAGGGGGAGGTGGAGTGGCGTACTGCTGTaGCACCTGCTGTGCCACCAGCTGAGAATTGATGCGAGGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLRGRWSGVLL*HLLCHQLRIDARFP Trigger: AGGAAACCTCGCATCAATTCTCAGCTGGTGGCACAGCAGGTGGCACAGCAGTACGCCACTCCACCTCCCCCTAAGAAGGAGAAGAAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 90 bp | AAGTCTGTGATAATGACGGTGACGTTGCCCACAGTTACTGCCAACTaGTGTGCGGTGCTCCTGTCCACATTCTTCAGCCGGGGCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSVIMTVTLPTVTAN*CAVLLSTFFSRGLE Trigger: CTCAAGGCCCCGGCTGAAGAATGTGGACAGGAGCACCGCACAGCAGTTGGCAGTAACTGTGGGCAACGTCACCGTCATTATCACAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | GTGCAAGCAGCATGGGCAGGTGGAGGGTTTGAATCTCATACCCTGATTCATAGTTGCGGCAGGTTTCGCTaGTCTTTTTGGCCTGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VQAAWAGGGFESHTLIHSCGRFR*SFWPGR Trigger: CCGACCAGGCCAAAAAGACAAGCGAAACCTGCCGCA...ACTATGAATCAGGGTATGAGATTCAAACCCTCCACCTGCCCATGCTGCTTGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCGAGACATCTTAGTGGAGCTAAACTCACAGAAGCGTCTGCCAATGTTTTCTTCAGCCGGGGCCTaGAGGTGTGGTTTGTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRDILVELNSQKRLPMFSSAGA*RCGLFR Trigger: GCGAAACAAACCACACCTCAAGGCCCCGGCTGAAGA...AAACATTGGCAGACGCTTCTGTGAGTTTAGCTCCACTAAGATGTCTCGCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | AGTCAACAAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTGAGCTTTCCCCTGACATGTCGCCCTTaGGCGTGGAGGAGCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQQRTPTIHSLSWEVSFPLTCRP*AWRSGR Trigger: CCTCCCGCTCCTCCACGCCAAAGGGCGACATGTCAG...GGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | CAACAAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTGAGCTTTCCCCGCGTTTCGCTTGTCTTTTaGGCCTGGTCGGGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QQRTPTIHSLSWEVSFPRVSLVF*AWSGSS Trigger: AGAAGAGCCCGACCAGGCCAAAAAGACAAGCGAAAC...GCGGGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | AGAGGATGTAGACTGCTTCCCTGGGTGGTGTGGATTCAAAGATGCACTACCGCACTGGGGCTAATGTCCTaGTCTTTCTCTGGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGCRLLPWVVWIQRCTTALGLMS*SFSGFS Trigger: AGAAAAGCCAGAGAAAGACAAGGACATTAGCCCCAG...TGCGGTAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | AGAGGATGTAGACTGCTTCCCTGGGTGGTGTGGATTCAAAGATGCACTACCGCATTGTTGGTGTTTTTCTaGGTGACACTGGGGCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: RGCRLLPWVVWIQRCTTALLVFF*VTLGLM Trigger: CATTAGCCCCAGTGTCACCAAGAAAAACACCAACAA...TGCGGTAGTGCATCTTTGAATCCACACCACCCAGGGAAGCAGTCTACATCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | CAACAAAGAACACCTACTATTCATTCACTCTCCTGGGAAGTGAGCTTTCCCCGCATAATGACGGTGACGTaGCCCACAGTTACTGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QQRTPTIHSLSWEVSFPRIMTVT*PTVTAN Trigger: GTTGGCAGTAACTGTGGGCAACGTCACCGTCATTAT...GCGGGGAAAGCTCACTTCCCAGGAGAGTGAATGAATAGTAGGTGTTCTTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | GTACACAGTGTTTCTGAACAAAGTGCATACCAACACTTATTGGTTCAAAGAGCAGCCTTGAGGTGTGGTTaGTTTCGCTGGTCTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VHSVSEQSAYQHLLVQRAALRCG*FRWSLL Trigger: CAACAAAGACCAGCGAAACAAACCACACCTCAAGGC...TGCTCTTTGAACCAATAAGTGTTGGTATGCACTTTGTTCAGAAACACTGTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS-3UTR CAA 90 bp | GTACACAGTGTTTCTGAACAAAGTGCATACCAACACTTATTGGTTCAAAGAGCATTCTCTGGCTTTTCTTaGTCAGGCTTTTCGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHSVSEQSAYQHLLVQRAFSGFS*SGFSTF Trigger: GAAGGTCGAAAAGCCTGACAAAGAAAAGCCAGAGAA...TGCTCTTTGAACCAATAAGTGTTGGTATGCACTTTGTTCAGAAACACTGTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 72 bp | CCTTTGGCGTGGAGGAGCGGGAGGAGCCTTTGTCTGTaGTCTCTGAGCCCGAGCTGCTCTGGTTCTGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PLAWRSGRSLCL*SLSPSCSGSAV Trigger: AACAGCAGAACCAGAGCAGCTCGGGCTCAGAGAGCACAGACAAAGGCTCCTCCCGCTCCTCCACGCCAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 72 bp | GGGAGGTGGAGTGGCGTACTGCTGTGCCACCTGCTGTaGCACCAGCTGAGAATTGATGCGAGGTTTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRWSGVLLCHLL*HQLRIDARFPG Trigger: ACCAGGAAACCTCGCATCAATTCTCAGCTGGTGGCACAGCAGGTGGCACAGCAGTACGCCACTCCACCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 72 bp | CTCCTTCTTAGGGGGAGGTGGAGTGGCGTACTGCTGTaGCACCTGCTGTGCCACCAGCTGAGAATTGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLLRGRWSGVLL*HLLCHQLRIDA Trigger: CGCATCAATTCTCAGCTGGTGGCACAGCAGGTGGCACAGCAGTACGCCACTCCACCTCCCCCTAAGAAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS GCA 72 bp | TTGTCTGTGCTCTCTGAGCCCGAGCTGCTCTGGTTCTaGTGTTCTGACCCTGCACTGGAGGTCACTGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSVLSEPELLWF*CSDPALEVTVE Trigger: TTCCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGCTCAGAGAGCACAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS CCA 72 bp | ATTCATCATTCACTGCTGACATGTCGCCCTTTGGCGTaGAGGAGCGGGAGGAGCCTTTGTCTGTGCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IHHSLLTCRPLA*RSGRSLCLCSL Trigger: CAGAGAGCACAGACAAAGGCTCCTCCCGCTCCTCCACGCCAAAGGGCGACATGTCAGCAGTGAATGATGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
||
| CDS CAA 72 bp | ACAATCCCAAAAGCCTTCGTCTGCGGCAGGTTTCGCTaGTCTTTTTGGCCTGGTCGGGCTCTTCTTGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: TIPKAFVCGRFR*SFWPGRALLVA Trigger: GGCGACAAGAAGAGCCCGACCAGGCCAAAAAGACAAGCGAAACCTGCCGCAGACGAAGGCTTTTGGGATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| CDS CAA 72 bp | AGAAAGATTCATCATTCACTGCTGACATGTCGCCCTTaGGCGTGGAGGAGCGGGAGGAGCCTTTGTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RKIHHSLLTCRP*AWRSGRSLCLC Trigger: GCACAGACAAAGGCTCCTCCCGCTCCTCCACGCCAAAGGGCGACATGTCAGCAGTGAATGATGAATCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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| CDS GCA 72 bp | GTCTGTGATAATGACGGTGACGTTGCCCACAGTTACTaGCAACTGCTGTGCGGTGCTCCTGTCCACATTCTT | + |
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Preference number: 6 (lower is better) Translates to: VCDNDGDVAHSY*QLLCGAPVHIL Trigger: AAGAATGTGGACAGGAGCACCGCACAGCAGTTGGCAGTAACTGTGGGCAACGTCACCGTCATTATCACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101118.4 |
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