Pregenerated sensors for RXYLT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034620Ensembl transcript IDs: ENSMUST00000038772.13, ENSMUST00000140299.3
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCAGCAGCTCCACGAGCAGCACTATGATACAGCACGGTCGAAGCTaGGACTTGGACTATGTGTGGCCTGCAGAGCTGCCGCCACCACAG | + |
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Preference number: 1 (lower is better) Translates to: TSSSTSSTMIQHGRS*DLDYVWPAELPPPQ Trigger: CTGTGGTGGCGGCAGCTCTGCAGGCCACACATAGTCCAAGTCCCAGCTTCGACCGTGCTGTATCATAGTGCTGCTCGTGGAGCTGCTGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR TCA 90 bp | TACAGCTGGGCCTGTGATGAAGCTGTAATGCGTTCTTCCTACAACTaGCTGTCCTTCCCTCCACTGAGCAGTCACATCAGCAGGATCAAG | + |
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Preference number: 1 (lower is better) Translates to: YSWACDEAVMRSSYN*LSFPPLSSHISRIK Trigger: CTTGATCCTGCTGATGTGACTGCTCAGTGGAGGGAAGGACAGTCAGTTGTAGGAAGAACGCATTACAGCTTCATCACAGGCCCAGCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR TCA 90 bp | GCCTGCAGAGCTGCCGCCACCACAGCTCTAGCTTCAGCTCCCTCCTaGGTTCCTTATATATTTTGGGTATTAGTCCTCTATCAGACCTTG | + |
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Preference number: 1 (lower is better) Translates to: ACRAAATTALASAPS*VPYIFWVLVLYQTL Trigger: CAAGGTCTGATAGAGGACTAATACCCAAAATATATAAGGAACTCAGGAGGGAGCTGAAGCTAGAGCTGTGGTGGCGGCAGCTCTGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CCA 90 bp | CTTCTATTATGTGGCTTCGGGGGATTGAACTTAGGTCATCAGGCTTaGGAGCAAGCACCTTTAACCACTCAACCATCCTGCCAGTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: LLLCGFGGLNLGHQA*EQAPLTTQPSCQFK Trigger: CTTGAACTGGCAGGATGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACATAATAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR GCA 90 bp | ACTGTCCTTCCCTCCACTGAGCAGTCACATCAGCAGGATCAAGAGTaGCTTCAAAAATATGTTCCCAGAGATACAGACCAATGGCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: TVLPSTEQSHQQDQE*LQKYVPRDTDQWQL Trigger: AAGCTGCCATTGGTCTGTATCTCTGGGAACATATTTTTGAAGGCACTCTTGATCCTGCTGATGTGACTGCTCAGTGGAGGGAAGGACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR GCA 90 bp | CTCTCATCATGCAGCATTGTCCAGCTGGCTTCAACTACAGGAAACTaGCTATATGTTGCTACACCTAAAGGCCACTGGAGAATGTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: LSSCSIVQLASTTGN*LYVATPKGHWRMSA Trigger: TGCAGACATTCTCCAGTGGCCTTTAGGTGTAGCAACATATAGGCAGTTTCCTGTAGTTGAAGCCAGCTGGACAATGCTGCATGATGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR CCA 90 bp | AAGTCACAAGACAGTCGTGAGACTCATTTCTCTCCTTCTATTATGTaGCTTCGGGGGATTGAACTTAGGTCATCAGGCTTGGGAGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: KSQDSRETHFSPSIM*LRGIELRSSGLGAS Trigger: GCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACATAATAGAAGGAGAGAAATGAGTCTCACGACTGTCTTGTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR GCA 90 bp | ATCACTGCCAGCAATCCCAGAGGCTTAACCCTTTGTTTTGAGAAATaGAGGTTTCCAGGTGAGGAATTCGCTCTTCCTAAGTGCCAACAA | + |
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Preference number: 1 (lower is better) Translates to: ITASNPRGLTLCFEK*RFPGEEFALPKCQQ Trigger: TTGTTGGCACTTAGGAAGAGCGAATTCCTCACCTGGAAACCTGCATTTCTCAAAACAAAGGGTTAAGCCTCTGGGATTGCTGGCAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR TCA 90 bp | AGACTATTAGTAAAAGCAGAACTTGTCAGTCCCATCCATGTGGGCTaGCAACATGTACTTCCCTCTAGACTCTCGATCTCCTTTACAGAG | + |
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Preference number: 1 (lower is better) Translates to: RLLVKAELVSPIHVG*QHVLPSRLSISFTE Trigger: CTCTGTAAAGGAGATCGAGAGTCTAGAGGGAAGTACATGTTGTCAGCCCACATGGATGGGACTGACAAGTTCTGCTTTTACTAATAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CCA 90 bp | TTCTCTCCCAGACTTCCATGTACTCCTCCTGTTCGTGCTTCACAGTaGTCATTATCACTGCCAGTTCATTACTCACTTCTAGCTTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: FSPRLPCTPPVRASQ*SLSLPVHYSLLACY Trigger: ATAACAAGCTAGAAGTGAGTAATGAACTGGCAGTGATAATGACCACTGTGAAGCACGAACAGGAGGAGTACATGGAAGTCTGGGAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CCA 90 bp | GACAGACTATGCAGCTCAAGGGAAACAGCAGTCTGTTCTGACACTTaGGAAACTGGATTCAACAGACAGCTAAGTTATTGGCTGTTTATG | + |
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Preference number: 1 (lower is better) Translates to: DRLCSSRETAVCSDT*ETGFNRQLSYWLFM Trigger: CATAAACAGCCAATAACTTAGCTGTCTGTTGAATCCAGTTTCCCAAGTGTCAGAACAGACTGCTGTTTCCCTTGAGCTGCATAGTCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CCA 90 bp | AGAAATTACATATGTAGGGCCTCTCATCATGCAGCATTGTCCAGCTaGCTTCAACTACAGGAAACTGCCTATATGTTGCTACACCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: RNYICRASHHAALSS*LQLQETAYMLLHLK Trigger: CTTTAGGTGTAGCAACATATAGGCAGTTTCCTGTAGTTGAAGCCAGCTGGACAATGCTGCATGATGAGAGGCCCTACATATGTAATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR CCA 90 bp | TTTATTTATTTACTTATCTGCTGCGTGTTTCTGTGTGCATGCTGGTaGGGAAGTCACAAGACAGTCGTGAGACTCATTTCTCTCCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: FIYLLICCVFLCACW*GSHKTVVRLISLLL Trigger: TAGAAGGAGAGAAATGAGTCTCACGACTGTCTTGTGACTTCCCCACCAGCATGCACACAGAAACACGCAGCAGATAAGTAAATAAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR GCA 90 bp | GAAGAGAAGATTCTATCTTCACTTTATATAAACAAAACTGGCATGTaGCAGAAGAGAAAGACCCCAGAGGACAAACAAACCCTAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: EEKILSSLYINKTGM*QKRKTPEDKQTLVL Trigger: CAGCACTAGGGTTTGTTTGTCCTCTGGGGTCTTTCTCTTCTGGCACATGCCAGTTTTGTTTATATAAAGTGAAGATAGAATCTTCTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CCA 90 bp | TTATTTATTTATTTACTTATCTGCTGCGTGTTTCTGTGTGCATGCTaGTGGGGAAGTCACAAGACAGTCGTGAGACTCATTTCTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LFIYLLICCVFLCAC*WGSHKTVVRLISLL Trigger: AAGGAGAGAAATGAGTCTCACGACTGTCTTGTGACTTCCCCACCAGCATGCACACAGAAACACGCAGCAGATAAGTAAATAAATAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR GCA 90 bp | TCAGATTGGGTGTGGACCACCCACACCCAAAGCAGAGCACCTTTCGTTAAACCTGTGGCTGCCTATCACTaGCAGCAATCCCAGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SDWVWTTHTQSRAPFVKPVAAYH*QQSQRL Trigger: AAGCCTCTGGGATTGCTGGCAGTGATAGGCAGCCAC...AGGTTTAACGAAAGGTGCTCTGCTTTGGGTGTGGGTGGTCCACACCCAATCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR CCA 90 bp | CATCTTCTACCACAGGAATGGAGCCAAAGGAGCAGGCCTCATAGATCCTGTAACCCCAGGAACTACAGCTaGGCCTGTGATGAAGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: HLLPQEWSQRSRPHRSCNPRNYS*ACDEAV Trigger: TACAGCTTCATCACAGGCCCAGCTGTAGTTCCTGGG...GTTACAGGATCTATGAGGCCTGCTCCTTTGGCTCCATTCCTGTGGTAGAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTCAAGACAAAGTGTGAGTGACCACACGGGTAACATGCCCCATCAGGTCCTGTGTGCATGCTGGTaGGGAAGTCACAAGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: SNSRQSVSDHTGNMPHQVLCACW*GSHKTV Trigger: GACTGTCTTGTGACTTCCCCACCAGCATGCACACAG...GACCTGATGGGGCATGTTACCCGTGTGGTCACTCACACTTTGTCTTGAGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR TCA 90 bp | GAAACTGCCTATATGTTGCTACACCTAAAGGCCACTGGAGAATGTCTGCACCATTGTCCTTCCCTCCACTaGGCAGTCACATCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ETAYMLLHLKATGECLHHCPSLH*AVTSAG Trigger: TCCTGCTGATGTGACTGCTCAGTGGAGGGAAGGACA...ATGGTGCAGACATTCTCCAGTGGCCTTTAGGTGTAGCAACATATAGGCAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR GCA 90 bp | TATGGAGAAGTACCCAGGAACTACAGCTGGGCCTGTGATGAAGCTGTAATGCGTGACCAATGGCAGCTTTaGCCCAGATTTGCACCCTAT | + |
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Preference number: 2 (lower is better) Translates to: YGEVPRNYSWACDEAVMRDQWQL*PRFAPY Trigger: ATAGGGTGCAAATCTGGGGCAAAGCTGCCATTGGTC...ACGCATTACAGCTTCATCACAGGCCCAGCTGTAGTTCCTGGGTACTTCTCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR TCA 90 bp | CATCTTCTACCACAGGAATGGAGCCAAAGGAGCAGGCCTCATAGATCCTGTAACCTACAGGGCACAATGTaGGATCACTGTGAAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: HLLPQEWSQRSRPHRSCNLQGTM*DHCEAK Trigger: CTTTGCTTCACAGTGATCTCACATTGTGCCCTGTAG...GTTACAGGATCTATGAGGCCTGCTCCTTTGGCTCCATTCCTGTGGTAGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR TCA 90 bp | AAAGAAGCACTTCTCAGCATGTGTGTCGATGCTGACAAAGTAGCCCAGGGCCCTGCTTCAGCTCCCTCCTaGGTTCCTTATATATTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KEALLSMCVDADKVAQGPASAPS*VPYIFW Trigger: CCAAAATATATAAGGAACTCAGGAGGGAGCTGAAGC...AGGGCCCTGGGCTACTTTGTCAGCATCGACACACATGCTGAGAAGTGCTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCACAGTGACCAGCTGTCATCACATCTTCTACCACAGGAATGGAGCCAAACCACTGGAGAATGTCTaGACCATTAATCCAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: VSTVTSCHHIFYHRNGAKPLENV*TINPGA Trigger: AGCCCCTGGATTAATGGTGCAGACATTCTCCAGTGG...TTTGGCTCCATTCCTGTGGTAGAAGATGTGATGACAGCTGGTCACTGTGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTCAAGACAAAGTGTGAGTGACCACACGGGTAACATGCCCCATCAGGTCTTTCTGTGTGCATGCTaGTGGGGAAGTCACAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SNSRQSVSDHTGNMPHQVFLCAC*WGSHKT Trigger: TGTCTTGTGACTTCCCCACCAGCATGCACACAGAAA...GACCTGATGGGGCATGTTACCCGTGTGGTCACTCACACTTTGTCTTGAGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTCAAGACAAAGTGTGAGTGACCACACGGGTAACATGCCCCATCAGGTCAGTATTGTCAGGCTGTaGGCTACTTCCTGGATAACC | + |
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Preference number: 2 (lower is better) Translates to: SNSRQSVSDHTGNMPHQVSIVRL*ATSWIT Trigger: GGTTATCCAGGAAGTAGCCCACAGCCTGACAATACT...GACCTGATGGGGCATGTTACCCGTGTGGTCACTCACACTTTGTCTTGAGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CAA 90 bp | GTCGTGAGACTCATTTCTCTCCTTCTATTATGTGGCTTCGGGGGATaGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCTTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: VVRLISLLLLCGFGG*NLGHQAWEQAPLTT Trigger: AGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACATAATAGAAGGAGAGAAATGAGTCTCACGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR CCA 90 bp | GAATGGAGCCAAAGGAGCAGGCCTCATAGATCCTGTAACATTCCGTGTTCACTCAGAGATACAGACCAATaGCAGCTTTGCCCCAGATTT | + |
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Preference number: 2 (lower is better) Translates to: EWSQRSRPHRSCNIPCSLRDTDQ*QLCPRF Trigger: AAATCTGGGGCAAAGCTGCCATTGGTCTGTATCTCT...GAGTGAACACGGAATGTTACAGGATCTATGAGGCCTGCTCCTTTGGCTCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR CAA 90 bp | CACTCCTACAGGGCACAATGTGAGATCACTGTGAAGCAAAGCATCTaGGTAATTCTTAAGGCTTTCATTTGTCTCCTGAGGCTGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: HSYRAQCEITVKQSI*VILKAFICLLRLPL Trigger: CAGTGGCAGCCTCAGGAGACAAATGAAAGCCTTAAGAATTACCAAGATGCTTTGCTTCACAGTGATCTCACATTGTGCCCTGTAGGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR GCA 90 bp | TCAGATTGGGTGTGGACCACCCACACCCAAAGCAGAGCACCTTTCGTTAAACCTTTTATTATCTGGTCCTaGGATCTCCATGTTGATGTC | + |
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Preference number: 2 (lower is better) Translates to: SDWVWTTHTQSRAPFVKPFIIWS*DLHVDV Trigger: GACATCAACATGGAGATCGCAGGACCAGATAATAAA...AGGTTTAACGAAAGGTGCTCTGCTTTGGGTGTGGGTGGTCCACACCCAATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAGAAGCACTTCTCAGCATGTGTGTCGATGCTGACAAAGTAGCCCAGGGCCTTCAGTCCCATAAGTaGGTTCAAGTTAATGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LKEALLSMCVDADKVAQGLQSHK*VQVNEK Trigger: TTTCTCATTAACTTGAACTCACTTATGGGACTGAAG...GCCCTGGGCTACTTTGTCAGCATCGACACACATGCTGAGAAGTGCTTCTTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCACAGTGACCAGCTGTCATCACATCTTCTACCACAGGAATGGAGCCAAAAAGACAACAGCCAGATaGTGCAGTTTTTGGGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VSTVTSCHHIFYHRNGAKKTTAR*CSFWVF Trigger: GAAAACCCAAAAACTGCAGCATCTGGCTGTTGTCTT...TTTGGCTCCATTCCTGTGGTAGAAGATGTGATGACAGCTGGTCACTGTGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR GCA 90 bp | TCAGATTGGGTGTGGACCACCCACACCCAAAGCAGAGCACCTTTCGTTAAACCTGATTCAGATCGCTGTTaGTGTAATAACAAAATGAGC | + |
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Preference number: 2 (lower is better) Translates to: SDWVWTTHTQSRAPFVKPDSDRC*CNNKMS Trigger: GCTCATTTTGTTATTACAGCAACAGCGATCTGAATC...AGGTTTAACGAAAGGTGCTCTGCTTTGGGTGTGGGTGGTCCACACCCAATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CAA 90 bp | CAGTTCCTAAGAAATTACATATGTAGGGCCTCTCATCATGCAGCATaGTCCAGCTGGCTTCAACTACAGGAAACTGCCTATATGTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: QFLRNYICRASHHAA*SSWLQLQETAYMLL Trigger: TAGCAACATATAGGCAGTTTCCTGTAGTTGAAGCCAGCTGGACAATGCTGCATGATGAGAGGCCCTACATATGTAATTTCTTAGGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR GCA 90 bp | GACCTTGGCACACCGAAGCCTGAACTAGGAGCCAAAAGAAACCTTTTCCCTCTTATCTCTTTAATCTTGTaGATAGTAGTAGCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: DLGTPKPELGAKRNLFPLISLIL*IVVAKG Trigger: TCCTTTGGCTACTACTATGCACAAGATTAAAGAGAT...AAGAGGGAAAAGGTTTCTTTTGGCTCCTAGTTCAGGCTTCGGTGTGCCAAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR GCA 90 bp | TCAAACTCAAGACAAAGTGTGAGTGACCACACGGGTAACATGCCCCATCAGGTCATTTATTTACTTATCTaGTGCGTGTTTCTGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SNSRQSVSDHTGNMPHQVIYLLI*CVFLCA Trigger: TGCACACAGAAACACGCAGCAGATAAGTAAATAAAT...GACCTGATGGGGCATGTTACCCGTGTGGTCACTCACACTTTGTCTTGAGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR GCA 90 bp | GAAACTGCCTATATGTTGCTACACCTAAAGGCCACTGGAGAATGTCTGCACCATGATTTGTTTAAGATTTaGAGGTTGGTCTTAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: ETAYMLLHLKATGECLHHDLFKI*RLVLTL Trigger: CAGAGTTAAGACCAACCTGCAAATCTTAAACAAATC...ATGGTGCAGACATTCTCCAGTGGCCTTTAGGTGTAGCAACATATAGGCAGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR GCA 90 bp | ATTAATCCAGGGGCTGTCATATGTTATGAAAAGCAGATCCACAAAGCCTCCATTCAGTCATTTTCACAGTaGTCATTTCCAAGCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: INPGAVICYEKQIHKASIQSFSQ*SFPSKT Trigger: TGTCTTGCTTGGAAATGAGCACTGTGAAAATGACTG...AATGGAGGCTTTGTGGATCTGCTTTTCATAACATATGACAGCCCCTGGATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGAAGATTCTATCTTCACTTTATATAAACAAAACTGGCATGTGCCAGAAGGTCATGTGTGTTACGTaGACTGTGTACCTGTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: EEKILSSLYINKTGMCQKVMCVT*TVYLCL Trigger: TAGACACAGGTACACAGTGCACGTAACACACATGAC...CTTCTGGCACATGCCAGTTTTGTTTATATAAAGTGAAGATAGAATCTTCTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAATTTTCATAGGCAGTTCCTAAGAAATTACATATGTAGGGCCTCTCATCATAAATTAACCACTGGGTaGCATGAAAGATCTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: MNFHRQFLRNYICRASHHKLTTG*HERSLL Trigger: AAGCAAAGATCTTTCATGCCACCCAGTGGTTAATTT...ATGATGAGAGGCCCTACATATGTAATTTCTTAGGAACTGCCTATGAAAATTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR GCA 72 bp | GAAGCTGGGACTTGGACTATGTGTGGCCTGCAGAGCTaGCGCCACCACAGCTCTAGCTTCAGCTCCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: EAGTWTMCGLQS*RHHSSSFSSLL Trigger: CAGGAGGGAGCTGAAGCTAGAGCTGTGGTGGCGGCAGCTCTGCAGGCCACACATAGTCCAAGTCCCAGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CCA 72 bp | TCCACGAGCAGCACTATGATACAGCACGGTCGAAGCTaGGACTTGGACTATGTGTGGCCTGCAGAGCTGCCG | + |
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Preference number: 3 (lower is better) Translates to: STSSTMIQHGRS*DLDYVWPAELP Trigger: CGGCAGCTCTGCAGGCCACACATAGTCCAAGTCCCAGCTTCGACCGTGCTGTATCATAGTGCTGCTCGTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CCA 72 bp | TGTGGCTTCGGGGGATTGAACTTAGGTCATCAGGCTTaGGAGCAAGCACCTTTAACCACTCAACCATCCTGC | + |
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Preference number: 3 (lower is better) Translates to: CGFGGLNLGHQA*EQAPLTTQPSC Trigger: GCAGGATGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR-3UTR CAA 90 bp | TATGGAGAAGTACCCAGGAACTACAGCTGGGCCTGTGATGAAGCTGTAATGCGTAGACCAATGGCAGCTTaGCCCCAGATTTGCACCCTA | + |
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Preference number: 3 (lower is better) Translates to: YGEVPRNYSWACDEAVMRRPMAA*PQICTL Trigger: TAGGGTGCAAATCTGGGGCAAAGCTGCCATTGGTCT...ACGCATTACAGCTTCATCACAGGCCCAGCTGTAGTTCCTGGGTACTTCTCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR TCA 72 bp | TGCGTTCTTCCTACAACTGACTGTCCTTCCCTCCACTaGGCAGTCACATCAGCAGGATCAAGAGTGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: CVLPTTDCPSLH*AVTSAGSRVPS Trigger: TGAAGGCACTCTTGATCCTGCTGATGTGACTGCTCAGTGGAGGGAAGGACAGTCAGTTGTAGGAAGAACGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR TCA 72 bp | GCCTGTGATGAAGCTGTAATGCGTTCTTCCTACAACTaGCTGTCCTTCCCTCCACTGAGCAGTCACATCAGC | + |
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Preference number: 3 (lower is better) Translates to: ACDEAVMRSSYN*LSFPPLSSHIS Trigger: GCTGATGTGACTGCTCAGTGGAGGGAAGGACAGTCAGTTGTAGGAAGAACGCATTACAGCTTCATCACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR CCA 72 bp | GTCCACATCTATGGAGAAGTACCCAGGAACTACAGCTaGGCCTGTGATGAAGCTGTAATGCGTTCTTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: VHIYGEVPRNYS*ACDEAVMRSSY Trigger: GTAGGAAGAACGCATTACAGCTTCATCACAGGCCCAGCTGTAGTTCCTGGGTACTTCTCCATAGATGTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
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| 3UTR CCA 72 bp | AGTGACCAGCTGTCATCACATCTTCTACCACAGGAATaGAGCCAAAGGAGCAGGCCTCATAGATCCTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SDQLSSHLLPQE*SQRSRPHRSCN Trigger: GTTACAGGATCTATGAGGCCTGCTCCTTTGGCTCCATTCCTGTGGTAGAAGATGTGATGACAGCTGGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| 3UTR-3UTR CAA 90 bp | CATCTTCTACCACAGGAATGGAGCCAAAGGAGCAGGCCTCATAGATCCTGTAACTCTCATCATGCAGCATaGTCCAGCTGGCTTCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: HLLPQEWSQRSRPHRSCNSHHAA*SSWLQL Trigger: TAGTTGAAGCCAGCTGGACAATGCTGCATGATGAGA...GTTACAGGATCTATGAGGCCTGCTCCTTTGGCTCCATTCCTGTGGTAGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| 3UTR TCA 72 bp | GCTGCCGCCACCACAGCTCTAGCTTCAGCTCCCTCCTaGGTTCCTTATATATTTTGGGTATTAGTCCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: AAATTALASAPS*VPYIFWVLVLY Trigger: ATAGAGGACTAATACCCAAAATATATAAGGAACTCAGGAGGGAGCTGAAGCTAGAGCTGTGGTGGCGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR GCA 72 bp | TGCAGCATTGTCCAGCTGGCTTCAACTACAGGAAACTaGCTATATGTTGCTACACCTAAAGGCCACTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSIVQLASTTGN*LYVATPKGHWR Trigger: TCTCCAGTGGCCTTTAGGTGTAGCAACATATAGGCAGTTTCCTGTAGTTGAAGCCAGCTGGACAATGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| 3UTR GCA 72 bp | CCCTCCACTGAGCAGTCACATCAGCAGGATCAAGAGTaGCTTCAAAAATATGTTCCCAGAGATACAGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: PSTEQSHQQDQE*LQKYVPRDTDQ Trigger: TTGGTCTGTATCTCTGGGAACATATTTTTGAAGGCACTCTTGATCCTGCTGATGTGACTGCTCAGTGGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| 3UTR CCA 72 bp | GACAGTCGTGAGACTCATTTCTCTCCTTCTATTATGTaGCTTCGGGGGATTGAACTTAGGTCATCAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: DSRETHFSPSIM*LRGIELRSSGL Trigger: CAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACATAATAGAAGGAGAGAAATGAGTCTCACGACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR CCA 72 bp | TTACTTATCTGCTGCGTGTTTCTGTGTGCATGCTGGTaGGGAAGTCACAAGACAGTCGTGAGACTCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLICCVFLCACW*GSHKTVVRLIS Trigger: AGAAATGAGTCTCACGACTGTCTTGTGACTTCCCCACCAGCATGCACACAGAAACACGCAGCAGATAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR GCA 72 bp | ATTCTCTCCCAGACTTCCATGTACTCCTCCTGTTCGTaGTTCACAGTGGTCATTATCACTGCCAGTTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: ILSQTSMYSSCS*FTVVIITASSL Trigger: TAATGAACTGGCAGTGATAATGACCACTGTGAAGCACGAACAGGAGGAGTACATGGAAGTCTGGGAGAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR GCA 72 bp | AGCAATCCCAGAGGCTTAACCCTTTGTTTTGAGAAATaGAGGTTTCCAGGTGAGGAATTCGCTCTTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SNPRGLTLCFEK*RFPGEEFALPK Trigger: CTTAGGAAGAGCGAATTCCTCACCTGGAAACCTGCATTTCTCAAAACAAAGGGTTAAGCCTCTGGGATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR CCA 72 bp | TATTTACTTATCTGCTGCGTGTTTCTGTGTGCATGCTaGTGGGGAAGTCACAAGACAGTCGTGAGACTCATT | + |
|
Preference number: 3 (lower is better) Translates to: YLLICCVFLCAC*WGSHKTVVRLI Trigger: AATGAGTCTCACGACTGTCTTGTGACTTCCCCACCAGCATGCACACAGAAACACGCAGCAGATAAGTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR CCA 72 bp | TGCAGCTCAAGGGAAACAGCAGTCTGTTCTGACACTTaGGAAACTGGATTCAACAGACAGCTAAGTTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSSRETAVCSDT*ETGFNRQLSYW Trigger: CCAATAACTTAGCTGTCTGTTGAATCCAGTTTCCCAAGTGTCAGAACAGACTGCTGTTTCCCTTGAGCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATTGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCTTTAACCACTCAACCAGCCATCTCTTTAATCTaGTGCATAGTAGTAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLNLGHQAWEQAPLTTQPAISLI*CIVVAK Trigger: TTTGGCTACTACTATGCACAAGATTAAAGAGATGGC...TGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR GCA 72 bp | GCTTGGGAGCAAGCACCTTTAACCACTCAACCATCCTaGCAGTTCAAGCTTAGAAAAATATTGCCATCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AWEQAPLTTQPS*QFKLRKILPSL Trigger: AAGAGATGGCAATATTTTTCTAAGCTTGAACTGGCAGGATGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR CCA 72 bp | AGACTTCCATGTACTCCTCCTGTTCGTGCTTCACAGTaGTCATTATCACTGCCAGTTCATTACTCACTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: RLPCTPPVRASQ*SLSLPVHYSLL Trigger: TAGAAGTGAGTAATGAACTGGCAGTGATAATGACCACTGTGAAGCACGAACAGGAGGAGTACATGGAAGTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR GCA 72 bp | TCACAGTGCTCATTTCCAAGCAAGACAACAGCCAGATaGTGCAGTTTTTGGGTTTTCATTAAATTCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQCSFPSKTTAR*CSFWVFIKFCA Trigger: TGCACAGAATTTAATGAAAACCCAAAAACTGCAGCATCTGGCTGTTGTCTTGCTTGGAAATGAGCACTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| 3UTR-3UTR CAA 90 bp | GCTCATTTCCAAGCAAGACAACAGCCAGATGCTGCAGTTTTTGGGTTTTCATTAAAAACAAGAACCACATaGTCCACATCTATGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AHFQARQQPDAAVFGFSLKTRTT*STSMEK Trigger: CTTCTCCATAGATGTGGACAATGTGGTTCTTGTTTT...TAATGAAAACCCAAAAACTGCAGCATCTGGCTGTTGTCTTGCTTGGAAATGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCCTCCTGAGTTCCTTATATATTTTGGGTATTAGTCCTCTATCAGACCTTGAAACCTTTTCCCTCTaGTTTCTTCCGGGTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLLSSLYILGISPLSDLETFSL*FLPGIL Trigger: CAAAATACCCGGAAGAAACAAGAGGGAAAAGGTTTC...AAGGTCTGATAGAGGACTAATACCCAAAATATATAAGGAACTCAGGAGGGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR GCA 72 bp | ATATACACACACAAACACAAATTAGCATACAACAGCTaGCCTATGGTGAGTCACCTTACCAACAAACTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: IYTHKHKLAYNS*PMVSHLTNKLL Trigger: CAACAGTTTGTTGGTAAGGTGACTCACCATAGGGCAGCTGTTGTATGCTAATTTGTGTTTGTGTGTGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR TCA 72 bp | TTGTCCCAGTGTCAAGAGAGGAAATACCTTTCATATTaGAATACAACTAAGACACAGCATGACTGGTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSQCQERKYLSY*NTTKTQHDWLA Trigger: AGCTAACCAGTCATGCTGTGTCTTAGTTGTATTTCAATATGAAAGGTATTTCCTCTCTTGACACTGGGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR GCA 72 bp | ATTCTATCTTCACTTTATATAAACAAAACTGGCATGTaGCAGAAGAGAAAGACCCCAGAGGACAAACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: ILSSLYINKTGM*QKRKTPEDKQT Trigger: GGTTTGTTTGTCCTCTGGGGTCTTTCTCTTCTGGCACATGCCAGTTTTGTTTATATAAAGTGAAGATAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGAAGATTCTATCTTCACTTTATATAAACAAAACTGGCATGTGCCAGAAGCAGACAGCTAAGTTATaGGCTGTTTATGTCAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: EEKILSSLYINKTGMCQKQTAKL*AVYVNS Trigger: TGAATTGACATAAACAGCCAATAACTTAGCTGTCTG...CTTCTGGCACATGCCAGTTTTGTTTATATAAAGTGAAGATAGAATCTTCTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR GCA 90 bp | ATCTCCTTCCCAAGGATTCCATTCTTCACTCTCCAAAGCGGACTGCTCTGCAGACGCCTCTCCTTCGCCTaGGCCGCCGCCGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISFPRIPFFTLQSGLLCRRLSFA*AAAAFL Trigger: CAGGAAGGCGGCGGCGGCGCAGGCGAAGGAGAGGCG...TCTGCAGAGCAGTCCGCTTTGGAGAGTGAAGAATGGAATCCTTGGGAAGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| CDS-3UTR CCA 90 bp | GAATGGAGCCAAAGGAGCAGGCCTCATAGATCCTGTAACATTCCGTGTTCACTCCCGCCGCCGCCTTCCTaGAGTTCCGAGAGGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EWSQRSRPHRSCNIPCSLPPPPS*SSERSC Trigger: GCACGACCTCTCGGAACTCCAGGAAGGCGGCGGCGG...GAGTGAACACGGAATGTTACAGGATCTATGAGGCCTGCTCCTTTGGCTCCATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| 3UTR CAA 72 bp | AGCAGCACTATGATACAGCACGGTCGAAGCTGGGACTaGGACTATGTGTGGCCTGCAGAGCTGCCGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTMIQHGRSWD*DYVWPAELPPP Trigger: TGGTGGCGGCAGCTCTGCAGGCCACACATAGTCCAAGTCCCAGCTTCGACCGTGCTGTATCATAGTGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR TCA 90 bp | TCAGATTGGGTGTGGACCACCCACACCCAAAGCAGAGCACCTTTCGTTAAACCTGGGCCCCCATGGCCTTaGGTAACTGCAGAGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDWVWTTHTQSRAPFVKPGPPWP*VTAEEH Trigger: GTGCTCCTCTGCAGTTACTCAAGGCCATGGGGGCCC...AGGTTTAACGAAAGGTGCTCTGCTTTGGGTGTGGGTGGTCCACACCCAATCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR CCA 90 bp | CATCTTCTACCACAGGAATGGAGCCAAAGGAGCAGGCCTCATAGATCCTGTAACGGTAGGCGGCGTAGATaGAGAAGAGGCAGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPQEWSQRSRPHRSCNGRRRR*RRGSTG Trigger: CCCTGTACTGCCTCTTCTCCATCTACGCCGCCTACC...GTTACAGGATCTATGAGGCCTGCTCCTTTGGCTCCATTCCTGTGGTAGAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| CDS-3UTR CCA 90 bp | GACCTTGGCACACCGAAGCCTGAACTAGGAGCCAAAAGAAACCTTTTCCCTCTTGGTAGGCGGCGTAGATaGAGAAGAGGCAGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLGTPKPELGAKRNLFPLGRRRR*RRGSTG Trigger: CCCTGTACTGCCTCTTCTCCATCTACGCCGCCTACC...AAGAGGGAAAAGGTTTCTTTTGGCTCCTAGTTCAGGCTTCGGTGTGCCAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAGATTCTATCTTCACTTTATATAAACAAAACTGGCATGTGCCAGAAGCGCCTCTCCTTCGCCTaGGCCGCCGCCGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEKILSSLYINKTGMCQKRLSFA*AAAAFL Trigger: CAGGAAGGCGGCGGCGGCGCAGGCGAAGGAGAGGCG...CTTCTGGCACATGCCAGTTTTGTTTATATAAAGTGAAGATAGAATCTTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR CCA 90 bp | GACCTTGGCACACCGAAGCCTGAACTAGGAGCCAAAAGAAACCTTTTCCCTCTTCCCAGGAACTACAGCTaGGCCTGTGATGAAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DLGTPKPELGAKRNLFPLPRNYS*ACDEAV Trigger: TACAGCTTCATCACAGGCCCAGCTGTAGTTCCTGGG...AAGAGGGAAAAGGTTTCTTTTGGCTCCTAGTTCAGGCTTCGGTGTGCCAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR GCA 90 bp | GACCTTGGCACACCGAAGCCTGAACTAGGAGCCAAAAGAAACCTTTTCCCTCTTCCACTGGAGAATGTCTaGACCATTAATCCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLGTPKPELGAKRNLFPLPLENV*TINPGA Trigger: AGCCCCTGGATTAATGGTGCAGACATTCTCCAGTGG...AAGAGGGAAAAGGTTTCTTTTGGCTCCTAGTTCAGGCTTCGGTGTGCCAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCTTTAACCACTCAACCACTTCTACCACAGGAATaGAGCCAAAGGAGCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGHQAWEQAPLTTQPLLPQE*SQRSRP Trigger: AGGCCTGCTCCTTTGGCTCCATTCCTGTGGTAGAAG...TGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCTTTAACCACTCAACCAGACCAATGGCAGCTTTaGCCCAGATTTGCACCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGHQAWEQAPLTTQPDQWQL*PRFAPY Trigger: ATAGGGTGCAAATCTGGGGCAAAGCTGCCATTGGTC...TGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAAGATTCTATCTTCACTTTATATAAACAAAACTGGCATGTGCCAGAAGCCGCCGCCGCCTTCCTaGAGTTCCGAGAGGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEKILSSLYINKTGMCQKPPPPS*SSERSC Trigger: GCACGACCTCTCGGAACTCCAGGAAGGCGGCGGCGG...CTTCTGGCACATGCCAGTTTTGTTTATATAAAGTGAAGATAGAATCTTCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR CAA 72 bp | CTCATTTCTCTCCTTCTATTATGTGGCTTCGGGGGATaGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LISLLLLCGFGG*NLGHQAWEQAP Trigger: AGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACATAATAGAAGGAGAGAAATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR TCA 90 bp | GGATTGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCTTTAACCACTCAACCACTACAGGGCACAATGTaGGATCACTGTGAAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGHQAWEQAPLTTQPLQGTM*DHCEAK Trigger: CTTTGCTTCACAGTGATCTCACATTGTGCCCTGTAG...TGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCTTTAACCACTCAACCAACACCTAAAGGCCACTaGAGAATGTCTGCACCATTA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGHQAWEQAPLTTQPTPKGH*RMSAPL Trigger: TAATGGTGCAGACATTCTCCAGTGGCCTTTAGGTGT...TGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCTCCTGAGTTCCTTATATATTTTGGGTATTAGTCCTCTATCAGACCTTCGTTCTTCCTACAACTaGCTGTCCTTCCCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSSLYILGISPLSDLRSSYN*LSFPPL Trigger: CAGTGGAGGGAAGGACAGTCAGTTGTAGGAAGAACG...AAGGTCTGATAGAGGACTAATACCCAAAATATATAAGGAACTCAGGAGGGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAACTTGTCAGTCCCATCCATGTGGGCTGACAACATGTACTTCCCTCTAGGCTGTCATATGTTATaGAAAGCAGATCCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQNLSVPSMWADNMYFPLGCHML*KADPQS Trigger: GCTTTGTGGATCTGCTTTTCATAACATATGACAGCC...TAGAGGGAAGTACATGTTGTCAGCCCACATGGATGGGACTGACAAGTTCTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR TCA 90 bp | GGTAAAAACATAATAAAGACCATAGTCCCATACACCATTAACAGCCTCTGGATTTGTCCTTCCCTCCACTaGGCAGTCACATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKNIIKTIVPYTINSLWICPSLH*AVTSAG Trigger: TCCTGCTGATGTGACTGCTCAGTGGAGGGAAGGACA...AATCCAGAGGCTGTTAATGGTGTATGGGACTATGGTCTTTATTATGTTTTTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCCTTCTATTATGTGGCTTCGGGGGATTGAACTTAGGTCATCAGGCTTGAACCACTGGGTGGCATaGAAGATCTTTGCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSPSIMWLRGIELRSSGLNHWVA*KIFAFS Trigger: AGAAAAAGCAAAGATCTTTCATGCCACCCAGTGGTT...CAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACATAATAGAAGGAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR CAA 72 bp | AGAAATTACATATGTAGGGCCTCTCATCATGCAGCATaGTCCAGCTGGCTTCAACTACAGGAAACTGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RNYICRASHHAA*SSWLQLQETAY Trigger: ATAGGCAGTTTCCTGTAGTTGAAGCCAGCTGGACAATGCTGCATGATGAGAGGCCCTACATATGTAATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCTCCTGAGTTCCTTATATATTTTGGGTATTAGTCCTCTATCAGACCTTGTTGTGTTTCCACAGTaGCCAGCTGTCATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSSLYILGISPLSDLVVFPQ*PAVITS Trigger: AGATGTGATGACAGCTGGTCACTGTGGAAACACAAC...AAGGTCTGATAGAGGACTAATACCCAAAATATATAAGGAACTCAGGAGGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCCTTCTATTATGTGGCTTCGGGGGATTGAACTTAGGTCATCAGGCTTGCAGTCATTTTCACAGTaGTCATTTCCAAGCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSPSIMWLRGIELRSSGLQSFSQ*SFPSKT Trigger: TGTCTTGCTTGGAAATGAGCACTGTGAAAATGACTG...CAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACATAATAGAAGGAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCTTTAACCACTCAACCAAAATTAACCACTGGGTaGCATGAAAGATCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGHQAWEQAPLTTQPKLTTG*HERSLL Trigger: AAGCAAAGATCTTTCATGCCACCCAGTGGTTAATTT...TGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCTCCTGAGTTCCTTATATATTTTGGGTATTAGTCCTCTATCAGACCTTAGAGATACAGACCAATaGCAGCTTTGCCCCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSSLYILGISPLSDLRDTDQ*QLCPRF Trigger: AAATCTGGGGCAAAGCTGCCATTGGTCTGTATCTCT...AAGGTCTGATAGAGGACTAATACCCAAAATATATAAGGAACTCAGGAGGGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCTCCTGAGTTCCTTATATATTTTGGGTATTAGTCCTCTATCAGACCTTAAGACAACAGCCAGATaGTGCAGTTTTTGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSSLYILGISPLSDLKTTAR*CSFWVF Trigger: GAAAACCCAAAAACTGCAGCATCTGGCTGTTGTCTT...AAGGTCTGATAGAGGACTAATACCCAAAATATATAAGGAACTCAGGAGGGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| CDS-3UTR CCA 90 bp | GGTAAAAACATAATAAAGACCATAGTCCCATACACCATTAACAGCCTCTGGATTGCAGCATTGTCCAGCTaGCTTCAACTACAGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GKNIIKTIVPYTINSLWIAALSS*LQLQET Trigger: AGTTTCCTGTAGTTGAAGCCAGCTGGACAATGCTGC...AATCCAGAGGCTGTTAATGGTGTATGGGACTATGGTCTTTATTATGTTTTTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
||
| 3UTR CAA 72 bp | GTTATGAAAAGCAGATCCACAAAGCCTCCATTTCTTTaGAGGAACTGCATTATCCAGTCATTTTCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VMKSRSTKPPFL*RNCIIQSFSQC Trigger: GCACTGTGAAAATGACTGGATAATGCAGTTCCTCAAAAGAAATGGAGGCTTTGTGGATCTGCTTTTCATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038772.13 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCTCCTGAGTTCCTTATATATTTTGGGTATTAGTCCTCTATCAGACCTTGATTTGTTTAAGATTTaGAGGTTGGTCTTAACTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSSLYILGISPLSDLDLFKI*RLVLTL Trigger: CAGAGTTAAGACCAACCTGCAAATCTTAAACAAATC...AAGGTCTGATAGAGGACTAATACCCAAAATATATAAGGAACTCAGGAGGGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| 3UTR CAA 72 bp | CACTTGGGAAACTGGATTCAACAGACAGCTAAGTTATaGGCTGTTTATGTCAATTCAGTTATAGGTGAATCA | + |
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Preference number: 4 (lower is better) Translates to: HLGNWIQQTAKL*AVYVNSVIGES Trigger: TGATTCACCTATAACTGAATTGACATAAACAGCCAATAACTTAGCTGTCTGTTGAATCCAGTTTCCCAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS CCA 90 bp | GCGGCCGGCGGCGGCGCCCGAAGAAGACGTGGTAGGCGGCGTAGATaGAGAAGAGGCAGTACAGGGCGACGAGGAGGGAGCACAGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: AAGGGARRRRGRRRR*RRGSTGRRGGSTAV Trigger: CACGGCTGTGCTCCCTCCTCGTCGCCCTGTACTGCCTCTTCTCCATCTACGCCGCCTACCACGTCTTCTTCGGGCGCCGCCGCCGGCCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038772.13 ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | GGGACTTGGACTATGTGTGGCCTGCAGAGCTGCCGCCACCACAGCTCTAGCTTCAGACCAATGGCAGCTTaGCCCCAGATTTGCACCCTA | + |
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Preference number: 5 (lower is better) Translates to: GTWTMCGLQSCRHHSSSFRPMAA*PQICTL Trigger: TAGGGTGCAAATCTGGGGCAAAGCTGCCATTGGTCT...GAAGCTAGAGCTGTGGTGGCGGCAGCTCTGCAGGCCACACATAGTCCAAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | GACCTTGGCACACCGAAGCCTGAACTAGGAGCCAAAAGAAACCTTTTCCCTCTTTCTCATCATGCAGCATaGTCCAGCTGGCTTCAACTA | + |
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Preference number: 5 (lower is better) Translates to: DLGTPKPELGAKRNLFPLSHHAA*SSWLQL Trigger: TAGTTGAAGCCAGCTGGACAATGCTGCATGATGAGA...AAGAGGGAAAAGGTTTCTTTTGGCTCCTAGTTCAGGCTTCGGTGTGCCAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | TTCTCTCCTTCTATTATGTGGCTTCGGGGGATTGAACTTAGGTCATCAGGCTTGAGCTCCTTCCAGTTCTaGATGAAGATGAAGGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FSPSIMWLRGIELRSSGLSSFQF*MKMKGA Trigger: GGCCCCCTTCATCTTCATCAAGAACTGGAAGGAGCT...CAAGCCTGATGACCTAAGTTCAATCCCCCGAAGCCACATAATAGAAGGAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | CTCAAAGAAGCACTTCTCAGCATGTGTGTCGATGCTGACAAAGTAGCCCAGGGCTTTAAGATTTGCAGGTaGGTCTTAACTCTGTGTCGC | + |
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Preference number: 5 (lower is better) Translates to: LKEALLSMCVDADKVAQGFKICR*VLTLCR Trigger: GCGACACAGAGTTAAGACCAACCTGCAAATCTTAAA...GCCCTGGGCTACTTTGTCAGCATCGACACACATGCTGAGAAGTGCTTCTTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGTCATCAGGCTTGGGAGCAAGCACCTTTAACCACTCAACCAGAAACTGCCTATATGTaGCTACACCTAAAGGCCACT | + |
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Preference number: 5 (lower is better) Translates to: GLNLGHQAWEQAPLTTQPETAYM*LHLKAT Trigger: AGTGGCCTTTAGGTGTAGCAACATATAGGCAGTTTC...TGGTTGAGTGGTTAAAGGTGCTTGCTCCCAAGCCTGATGACCTAAGTTCAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGAACTTGTCAGTCCCATCCATGTGGGCTGACAACATGTACTTCCCTCTAAAGCCTCCATTTCTTTaGAGGAACTGCATTATCCAG | + |
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Preference number: 5 (lower is better) Translates to: KQNLSVPSMWADNMYFPLKPPFL*RNCIIQ Trigger: CTGGATAATGCAGTTCCTCAAAAGAAATGGAGGCTT...TAGAGGGAAGTACATGTTGTCAGCCCACATGGATGGGACTGACAAGTTCTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | TCAGATTGGGTGTGGACCACCCACACCCAAAGCAGAGCACCTTTCGTTAAACCTTCATTAGTGCTTGTCTaGATGAATTTTCATAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SDWVWTTHTQSRAPFVKPSLVLV*MNFHRQ Trigger: CTGCCTATGAAAATTCATCAAGACAAGCACTAATGA...AGGTTTAACGAAAGGTGCTCTGCTTTGGGTGTGGGTGGTCCACACCCAATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | GACCTTGGCACACCGAAGCCTGAACTAGGAGCCAAAAGAAACCTTTTCCCTCTTGTGAAGCAAAGCATCTaGGTAATTCTTAAGGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: DLGTPKPELGAKRNLFPLVKQSI*VILKAF Trigger: GAAAGCCTTAAGAATTACCAAGATGCTTTGCTTCAC...AAGAGGGAAAAGGTTTCTTTTGGCTCCTAGTTCAGGCTTCGGTGTGCCAAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS-3UTR CAA 90 bp | AAGCAGAACTTGTCAGTCCCATCCATGTGGGCTGACAACATGTACTTCCCTCTAAAAACAAGAACCACATaGTCCACATCTATGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: KQNLSVPSMWADNMYFPLKTRTT*STSMEK Trigger: CTTCTCCATAGATGTGGACAATGTGGTTCTTGTTTT...TAGAGGGAAGTACATGTTGTCAGCCCACATGGATGGGACTGACAAGTTCTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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| CDS GCA 72 bp | GCGCCGCCGCCGCCTTCCTGGAGTTCCGAGAGGTCGTaGCCAGCGGCCGGCGGCGGCGCCCGAAGAAGACGT | + |
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Preference number: 6 (lower is better) Translates to: APPPPSWSSERS*PAAGGGARRRR Trigger: ACGTCTTCTTCGGGCGCCGCCGCCGGCCGCTGGGCACGACCTCTCGGAACTCCAGGAAGGCGGCGGCGGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038772.13 ENSMUST00000140299.3 |
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| CDS GCA 72 bp | TCCCAAGGATTCCATTCTTCACTCTCCAAAGCGGACTaGTCTCGGCCGCGCCTCTCCTTCGCCTGCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SQGFHSSLSKAD*SRPRLSFACAA Trigger: GGCGGCGCAGGCGAAGGAGAGGCGCGGCCGAGAGCAGTCCGCTTTGGAGAGTGAAGAATGGAATCCTTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140299.3 |
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