Pregenerated sensors for RXRG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015843Ensembl transcript IDs: ENSMUST00000015987.10, ENSMUST00000111380.2, ENSMUST00000111384.8, ENSMUST00000111386.8
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCGGCCAGAGTGGAAGATaGGGGAGAGTGTGCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: MYRGLATLPKNCRKDLSPGQSGR*GRVCRV Trigger: TACCCTGCACACTCTCCCCCATCTTCCACTCTGGCC...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAAAGATGGGGGAGAGTGTaGAGGGTAGGGCCACACACA | + |
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Preference number: 2 (lower is better) Translates to: QRLGHSSQELPERPQPLKRWGRV*RVGPHT Trigger: TGTGTGTGGCCCTACCCTGCACACTCTCCCCCATCT...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| 3UTR-3UTR GCA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCAGATGGGGGAGAGTGTaGAGGGTAGGGCCACACACA | + |
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Preference number: 2 (lower is better) Translates to: ICTEAWPLFPRTAGKTSARWGRV*RVGPHT Trigger: TGTGTGTGGCCCTACCCTGCACACTCTCCCCCATCT...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTACGCCCAGGGTCACCCTaGGTGGGGAAGCTGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: QPYKTPPRKVSCVERLSLRPGSP*VGKLQL Trigger: CAGCTGCAGCTTCCCCACCCAGGGTGACCCTGGGCG...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCAACAAGCATCACATTTTaGGGACAGGAAGGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPTSITF*GQEGRP Trigger: TGGCCTCCCTTCCTGTCCCCAAAATGTGATGCTTGT...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| 3UTR-3UTR CCA 90 bp | TTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGACAAGCATCACATTTTaGGGACAGGAAGGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LYVQRLGHSSQELPERPQTSITF*GQEGRP Trigger: TGGCCTCCCTTCCTGTCCCCAAAATGTGATGCTTGT...CTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCATCACATTTTGGGGACGGCCAGAGTGGAAGATaGGGGAGAGTGTGCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: KVSCVERLSLLQASHFGDGQSGR*GRVCRV Trigger: TACCCTGCACACTCTCCCCCATCTTCCACTCTGGCC...GTCCCCAAAATGTGATGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCAAGATGGGGGAGAGTGTaGAGGGTAGGGCCACACACA | + |
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Preference number: 2 (lower is better) Translates to: KTPPRKVSCVERLSLLQARWGRV*RVGPHT Trigger: TGTGTGTGGCCCTACCCTGCACACTCTCCCCCATCT...TGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| 3UTR GCA 72 bp | AGGAAGGGAGGCCAGAGTGGAAGATGGGGGAGAGTGTaGAGGGTAGGGCCACACACACACACCCGCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RKGGQSGRWGRV*RVGPHTHTRPG Trigger: CCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTCCCCCATCTTCCACTCTGGCCTCCCTTCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| 3UTR-3UTR CAA 90 bp | TTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGTACAAGCATCACATTTaGGGGACAGGAAGGGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: LYVQRLGHSSQELPERPQYKHHI*GTGREA Trigger: GGCCTCCCTTCCTGTCCCCAAAATGTGATGCTTGTA...CTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGGGGTGGCTGTCCATTaGCTTCCCCGTGGGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEGVAVH*LPRGQG Trigger: GCCTTGCCCACGGGGAAGCCAATGGACAGCCACCCC...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTGCACGTGGAGGCCCGTaGCCAGCAGGATGCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEAARGGP*PAGCHP Trigger: AGGATGGCATCCTGCTGGCCACGGGCCTCCACGTGC...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR TCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGACGTCGAGCCAGTGTaGCCAGGGGAGCCACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEDVEPV*PGEPPK Trigger: CTTTGGTGGCTCCCCTGGTCACACTGGCTCGACGTC...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAACCGTGGCCAGCAGGATaGCATCCTGGACGGAAACCG | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEPWPAG*HPGRKP Trigger: CGGTTTCCGTCCAGGATGGCATCCTGCTGGCCACGG...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCCGTGGCCAGCAGGATaGCATCCTGGACGGAAACCG | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEAPWPAG*HPGRKP Trigger: CGGTTTCCGTCCAGGATGGCATCCTGCTGGCCACGG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAACCGAGGGGCACTCACTaGGGTGTCTGTGTAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEPRGTH*GVCVAG Trigger: CCCAGCTACACAGACACCCCAGTGAGTGCCCCTCGG...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGCACGTGGAGGCCCGTaGCCAGCAGGATGCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGARGGP*PAGCHP Trigger: AGGATGGCATCCTGCTGGCCACGGGCCTCCACGTGC...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR TCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGACGTCGAGCCAGTGTaGCCAGGGGAGCCACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGDVEPV*PGEPPK Trigger: CTTTGGTGGCTCCCCTGGTCACACTGGCTCGACGTC...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGAGCAGGATGCCATCCTaGACGGAAACCGAGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGSRMPS*TETERW Trigger: CCACCGCTCGGTTTCCGTCCAGGATGGCATCCTGCT...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAATTCTGCCTCACTCTCTaGTCGCTCTCGGCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEFCLTL*SLSAPL Trigger: CAGAGGAGCCGAGAGCGAGCAGAGAGTGAGGCAGAA...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTCCATTGGCTTCCCCGTaGGCAAGGCTACTGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGPLASP*ARLLKG Trigger: GCCCTTCAGTAGCCTTGCCCACGGGGAAGCCAATGG...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTTGGCAGCGGTTGCGCTaGCGCTTGTCGATGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEAWQRLR*RLSMRQ Trigger: TTGTCTCATCGACAAGCGCCAGCGCAACCGCTGCCA...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGTGGCAGCGGTTGCGCTaGCGCTTGTCGATGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGWQRLR*RLSMRQ Trigger: TTGTCTCATCGACAAGCGCCAGCGCAACCGCTGCCA...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAACGGAAACCGAGCGGTaGGAGAAGGAGGCAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGETETER*EKEAMS Trigger: GCTCATTGCCTCCTTCTCCCACCGCTCGGTTTCCGT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTAGCAGGATGCCATCCTaGACGGAAACCGAGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGSRMPS*TETERW Trigger: CCACCGCTCGGTTTCCGTCCAGGATGGCATCCTGCT...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR TCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGACCGTAGTGCTTCCCTaGGGATCTGTCCCCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGTVVLP*GSVPTD Trigger: ATCTGTGGGGACAGATCCTCAGGGAAGCACTACGGT...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR TCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAACCGTAGTGCTTCCCTaGGGATCTGTCCCCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGETVVLP*GSVPTD Trigger: ATCTGTGGGGACAGATCCTCAGGGAAGCACTACGGT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCGCTCTCGGCTCCTCTaGCTTTCTTCTTGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEARSRLL*LSSCTA Trigger: AGCTGTGCAAGAAGAAAGGCAGAGGAGCCGAGAGCG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCTACTGAAGGGCTCATaGACGTCGAGCCAGTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEALLKGS*TSSQCD Trigger: GTCACACTGGCTCGACGTCCATGAGCCCTTCAGTAG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGTGTCTGTGTAGCTaGGGTGGCTGTCCATTGGCT | + |
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Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGGCLCS*GGCPLA Trigger: AGCCAATGGACAGCCACCCCAGCTACACAGACACCC...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAACACCAAGTTGATTCCTaGAGGAGCTGCCAGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEHQVDS*RSCQCS Trigger: GGAGCACTGGCAGCTCCTCCAGGAATCAACTTGGTG...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGCACCAAGTTGATTCCTaGAGGAGCTGCCAGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGHQVDS*RSCQCS Trigger: GGAGCACTGGCAGCTCCTCCAGGAATCAACTTGGTG...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTTTGACCACATTTAGCTaGGAGCTGGGTGGAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEALTTFS*ELGGAT Trigger: GGTGGCTCCACCCAGCTCCCAGCTAAATGTGGTCAA...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTACGGAAACCGAGCGGTaGGAGAAGGAGGCAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGTETER*EKEAMS Trigger: GCTCATTGCCTCCTTCTCCCACCGCTCGGTTTCCGT...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCCGGATACTTCTGCTTaGTATAGGCCTCCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEAPDTSA*YRPPGW Trigger: CCACCCTGGAGGCCTATACCAAGCAGAAGTATCCGG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGACGCAGCAGAAGCTTaGCAAACCTGCCTGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGDAAEA*QTCLAV Trigger: AACAGCCAGGCAGGTTTGCCAAGCTTCTGCTGCGTC...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR TCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGTCTCCAACATCTCCATaGGGAAGCTGTCGATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGSPTSP*GSCRWE Trigger: CTCCCATCGACAGCTTCCTCATGGAGATGTTGGAGA...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTACTACTGGCACATTCTaGCTCACTCTCTGCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEATTGTF*LTLCSL Trigger: GAGCGAGCAGAGAGTGAGGCAGAATGTGCCAGTAGT...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAACTACTGGCACATTCTaGCTCACTCTCTGCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGETTGTF*LTLCSL Trigger: GAGCGAGCAGAGAGTGAGGCAGAATGTGCCAGTAGT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTGAAGCTTGGCAAACCTaGCTGGCTGTTCCGGATACT | + |
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Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEAEAWQT*LAVPDT Trigger: AGTATCCGGAACAGCCAGGCAGGTTTGCCAAGCTTC...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGAAGCTTGGCAAACCTaGCTGGCTGTTCCGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEEAWQT*LAVPDT Trigger: AGTATCCGGAACAGCCAGGCAGGTTTGCCAAGCTTC...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTCACCAAGTTGATTCCTaGAGGAGCTGCCAGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGHQVDS*RSCQCS Trigger: GGAGCACTGGCAGCTCCTCCAGGAATCAACTTGGTG...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCCAGAGACCCAGGGCTaGTGGATGGGTAGTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEAPETQG*WMGSSY Trigger: ATATGAACTACCCATCCACCAGCCCTGGGTCTCTGG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAACCAGAGACCCAGGGCTaGTGGATGGGTAGTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEPETQG*WMGSSY Trigger: ATATGAACTACCCATCCACCAGCCCTGGGTCTCTGG...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGCCACCTCAGAGGGGTTaGATAAACCCTTGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGPPQRG*INPWHL Trigger: CAGATGCCAAGGGTTTATCCAACCCCTCTGAGGTGG...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGCTTGGCAAACCTGCCTaGCTGTTCCGGATACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGLGKPA*LFRILL Trigger: CAGAAGTATCCGGAACAGCCAGGCAGGTTTGCCAAG...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGACGCAGCAGAAGCTTaGCAAACCTGCCTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGDAAEA*QTCLAV Trigger: AACAGCCAGGCAGGTTTGCCAAGCTTCTGCTGCGTC...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCGGGGTGGCTGTCCATTaGCTTCCCCGTGGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MYRGLATLPKNCRKDLSPGVAVH*LPRGQG Trigger: GCCTTGCCCACGGGGAAGCCAATGGACAGCCACCCC...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTGAGACCCAGGGCTGGTaGATGGGTAGTTCATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEAETQGW*MGSSYF Trigger: GAAATATGAACTACCCATCCACCAGCCCTGGGTCTC...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGAGACCCAGGGCTGGTaGATGGGTAGTTCATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEETQGW*MGSSYF Trigger: GAAATATGAACTACCCATCCACCAGCCCTGGGTCTC...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCTTCGTGGCTACTACTaGCACATTCTGCCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEALRGYY*HILPHS Trigger: AGAGTGAGGCAGAATGTGCCAGTAGTAGCCACGAAG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAACGGAGTAGAATGACCTaGTCCTCCAAGGTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGERSRMT*SSKVRS Trigger: AGATCTCACCTTGGAGGACCAGGTCATTCTACTCCG...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCGGAGTAGAATGACCTaGTCCTCCAAGGTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEARSRMT*SSKVRS Trigger: AGATCTCACCTTGGAGGACCAGGTCATTCTACTCCG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTCCACCTCAGAGGGGTTaGATAAACCCTTGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGPPQRG*INPWHL Trigger: CAGATGCCAAGGGTTTATCCAACCCCTCTGAGGTGG...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGTCAGGTGATCTGCAGTaGGGTCTCCAACATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGSGDLQ*GLQHLH Trigger: ATGGAGATGTTGGAGACCCCACTGCAGATCACCTGA...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTCCCACTCAACGAGGGTaGAAAGTTGCTTATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGPTQRG*KVAYLQ Trigger: CTGCAGATAAGCAACTTTTCACCCTCGTTGAGTGGG...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTCTCTGCCTTTCTTCTTaGACAGCTTCCCGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGLCLSS*TASRFM Trigger: CATGAAGCGGGAAGCTGTGCAAGAAGAAAGGCAGAG...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCCCAGGGCTGGTGGATaGGTAGTTCATATTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEAPRAGG*VVHISN Trigger: ATTGGAAATATGAACTACCCATCCACCAGCCCTGGG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAATCTGTCCCCACAGATaGCACAGATGTGTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEICPHR*HRCVSP Trigger: TGGTGAAACACATCTGTGCCATCTGTGGGGACAGAT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGATCTGTCCCCACAGATaGCACAGATGTGTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGICPHR*HRCVSP Trigger: TGGTGAAACACATCTGTGCCATCTGTGGGGACAGAT...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGTAGGATTCTGTCTTTaGTTCCACAGCAAGTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGEVGFCL*FHSKFG Trigger: GCCGAACTTGCTGTGGAACCAAAGACAGAATCCTAC...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGTAGGATTCTGTCTTTaGTTCCACAGCAAGTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGVGFCL*FHSKFG Trigger: GCCGAACTTGCTGTGGAACCAAAGACAGAATCCTAC...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTCGGAGTAGAATGACCTaGTCCTCCAAGGTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGRSRMT*SSKVRS Trigger: AGATCTCACCTTGGAGGACCAGGTCATTCTACTCCG...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGTATAGGCCTCCAGGGTaGCATAAACCTTCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGYRPPG*HKPSLE Trigger: TTCGAGAGAAGGTTTATGCCACCCTGGAGGCCTATA...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTTCAGGTGATCTGCAGTaGGGTCTCCAACATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGSGDLQ*GLQHLH Trigger: ATGGAGATGTTGGAGACCCCACTGCAGATCACCTGA...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAAAGCTGCCAGTGCTCCTaGGGGTGGACCCATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKSCQCS*GWTHGR Trigger: TCTGCCATGGGTCCACCCTCAGGAGCACTGGCAGCT...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
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| CDS-3UTR GCA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAACGAGGGTGAAAAGTTaGTTATCTGCAGCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VQGRATHTHPPRVTLGGETRVKS*LSAAWH Trigger: ATGCCATGCTGCAGATAAGCAACTTTTCACCCTCGT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS-3UTR GCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTACGAGGGTGAAAAGTTaGTTATCTGCAGCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEATRVKS*LSAAWH Trigger: ATGCCATGCTGCAGATAAGCAACTTTTCACCCTCGT...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAACCGAGGGGCACTCACTaGGGTGTCTGTGTAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKPRGTH*GVCVAG Trigger: CCCAGCTACACAGACACCCCAGTGAGTGCCCCTCGG...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTTATAGGCCTCCAGGGTaGCATAAACCTTCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGYRPPG*HKPSLE Trigger: TTCGAGAGAAGGTTTATGCCACCCTGGAGGCCTATA...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAAAGCAGGATGCCATCCTaGACGGAAACCGAGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKSRMPS*TETERW Trigger: CCACCGCTCGGTTTCCGTCCAGGATGGCATCCTGCT...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR TCA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCACCGTAGTGCTTCCCTaGGGATCTGTCCCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MYRGLATLPKNCRKDLSPTVVLP*GSVPTD Trigger: ATCTGTGGGGACAGATCCTCAGGGAAGCACTACGGT...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAAAGTTGCTTATCTaGAGCATGGCATATGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVQGRATHTHPPRVTLGGEKLLI*SMAYVG Trigger: ACCAACATATGCCATGCTGCAGATAAGCAACTTTTC...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCACCGTGGCCAGCAGGATaGCATCCTGGACGGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPPWPAG*HPGRKP Trigger: CGGTTTCCGTCCAGGATGGCATCCTGCTGGCCACGG...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTTCTGACTTATCCATCTaGATGTCTTTCATCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGRATHTHPPRVTLGGEASDLSI*MSFILD Trigger: GTCCAAGATGAAAGACATGCAGATGGATAAGTCAGA...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCATTGGCTTCCCCGTaGGCAAGGCTACTGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICTEAWPLFPRTAGKTSAPLASP*ARLLKG Trigger: GCCCTTCAGTAGCCTTGCCCACGGGGAAGCCAATGG...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCACCGAGGGGCACTCACTaGGGTGTCTGTGTAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPPRGTH*GVCVAG Trigger: CCCAGCTACACAGACACCCCAGTGAGTGCCCCTCGG...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCACTACTGGCACATTCTaGCTCACTCTCTGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MYRGLATLPKNCRKDLSPTTGTF*LTLCSL Trigger: GAGCGAGCAGAGAGTGAGGCAGAATGTGCCAGTAGT...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTTCTGACTTATCCATCTaGATGTCTTTCATCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ESVQGRATHTHPPRVTLGSDLSI*MSFILD Trigger: GTCCAAGATGAAAGACATGCAGATGGATAAGTCAGA...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAACTACTGAAGGGCTCATaGACGTCGAGCCAGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKLLKGS*TSSQCD Trigger: GTCACACTGGCTCGACGTCCATGAGCCCTTCAGTAG...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGGGGTGGCTGTCCATTaGCTTCCCCGTGGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSGVAVH*LPRGQG Trigger: GCCTTGCCCACGGGGAAGCCAATGGACAGCCACCCC...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCACGGAAACCGAGCGGTaGGAGAAGGAGGCAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICTEAWPLFPRTAGKTSATETER*EKEAMS Trigger: GCTCATTGCCTCCTTCTCCCACCGCTCGGTTTCCGT...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCCTTGGCAAACCTGCCTaGCTGTTCCGGATACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MYRGLATLPKNCRKDLSPLGKPA*LFRILL Trigger: CAGAAGTATCCGGAACAGCCAGGCAGGTTTGCCAAG...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR TCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGACGTCGAGCCAGTGTaGCCAGGGGAGCCACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSDVEPV*PGEPPK Trigger: CTTTGGTGGCTCCCCTGGTCACACTGGCTCGACGTC...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAAGAAGCTTGGCAAACCTaGCTGGCTGTTCCGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKEAWQT*LAVPDT Trigger: AGTATCCGGAACAGCCAGGCAGGTTTGCCAAGCTTC...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCTTGACCACATTTAGCTaGGAGCTGGGTGGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ICTEAWPLFPRTAGKTSALTTFS*ELGGAT Trigger: GGTGGCTCCACCCAGCTCCCAGCTAAATGTGGTCAA...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR TCA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCTCTCCAACATCTCCATaGGGAAGCTGTCGATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ICTEAWPLFPRTAGKTSASPTSP*GSCRWE Trigger: CTCCCATCGACAGCTTCCTCATGGAGATGTTGGAGA...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCACGCTCTCGGCTCCTCTaGCTTTCTTCTTGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPRSRLL*LSSCTA Trigger: AGCTGTGCAAGAAGAAAGGCAGAGGAGCCGAGAGCG...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAAGAGACCCAGGGCTGGTaGATGGGTAGTTCATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKETQGW*MGSSYF Trigger: GAAATATGAACTACCCATCCACCAGCCCTGGGTCTC...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAACTTCGTGGCTACTACTaGCACATTCTGCCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKLRGYY*HILPHS Trigger: AGAGTGAGGCAGAATGTGCCAGTAGTAGCCACGAAG...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAAGCAGGATGCCATCCTaGACGGAAACCGAGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSSRMPS*TETERW Trigger: CCACCGCTCGGTTTCCGTCCAGGATGGCATCCTGCT...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTATAGGCCTCCAGGGTaGCATAAACCTTCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: MYRGLATLPKNCRKDLSPYRPPG*HKPSLE Trigger: TTCGAGAGAAGGTTTATGCCACCCTGGAGGCCTATA...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR TCA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCCACTCAACGAGGGTaGAAAGTTGCTTATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICTEAWPLFPRTAGKTSAPTQRG*KVAYLQ Trigger: CTGCAGATAAGCAACTTTTCACCCTCGTTGAGTGGG...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCAGAAGCTTGGCAAACCTaGCTGGCTGTTCCGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPEAWQT*LAVPDT Trigger: AGTATCCGGAACAGCCAGGCAGGTTTGCCAAGCTTC...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCTTCGTGGCTACTACTaGCACATTCTGCCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ICTEAWPLFPRTAGKTSALRGYY*HILPHS Trigger: AGAGTGAGGCAGAATGTGCCAGTAGTAGCCACGAAG...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAAGTAGGATTCTGTCTTTaGTTCCACAGCAAGTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKVGFCL*FHSKFG Trigger: GCCGAACTTGCTGTGGAACCAAAGACAGAATCCTAC...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAACGGAAACCGAGCGGTaGGAGAAGGAGGCAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSTETER*EKEAMS Trigger: GCTCATTGCCTCCTTCTCCCACCGCTCGGTTTCCGT...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCACCCACTCAACGAGGGTaGAAAGTTGCTTATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPPTQRG*KVAYLQ Trigger: CTGCAGATAAGCAACTTTTCACCCTCGTTGAGTGGG...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCACCGGATACTTCTGCTTaGTATAGGCCTCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSPDTSA*YRPPGW Trigger: CCACCCTGGAGGCCTATACCAAGCAGAAGTATCCGG...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | TTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCGGAGTAGAATGACCTaGTCCTCCAAGGTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LYVQRLGHSSQELPERPQRSRMT*SSKVRS Trigger: AGATCTCACCTTGGAGGACCAGGTCATTCTACTCCG...CTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCACCACCTCAGAGGGGTTaGATAAACCCTTGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSPPQRG*INPWHL Trigger: CAGATGCCAAGGGTTTATCCAACCCCTCTGAGGTGG...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATCTGACTTATCCATCTaGATGTCTTTCATCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRLGHSSQELPERPQPLKSDLSI*MSFILD Trigger: GTCCAAGATGAAAGACATGCAGATGGATAAGTCAGA...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCACTTCGTGGCTACTACTaGCACATTCTGCCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSLRGYY*HILPHS Trigger: AGAGTGAGGCAGAATGTGCCAGTAGTAGCCACGAAG...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | TTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGACGAGGGTGAAAAGTTaGTTATCTGCAGCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYVQRLGHSSQELPERPQTRVKS*LSAAWH Trigger: ATGCCATGCTGCAGATAAGCAACTTTTCACCCTCGT...CTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTAGGGTGTCTGTGTAGCTaGGGTGGCTGTCCATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPYKTPPRKVSCVERLSLGCLCS*GGCPLA Trigger: AGCCAATGGACAGCCACCCCAGCTACACAGACACCC...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCAGCACGTGGAGGCCCGTaGCCAGCAGGATGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTPPRKVSCVERLSLLQAARGGP*PAGCHP Trigger: AGGATGGCATCCTGCTGGCCACGGGCCTCCACGTGC...TGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCATATAGGCCTCCAGGGTaGCATAAACCTTCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSYRPPG*HKPSLE Trigger: TTCGAGAGAAGGTTTATGCCACCCTGGAGGCCTATA...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR TCA 90 bp | AAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCAAGCTGCCAGTGCTCCTaGGGGTGGACCCATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTPPRKVSCVERLSLLQASCQCS*GWTHGR Trigger: TCTGCCATGGGTCCACCCTCAGGAGCACTGGCAGCT...TGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTACCGGATACTTCTGCTTaGTATAGGCCTCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPYKTPPRKVSCVERLSLPDTSA*YRPPGW Trigger: CCACCCTGGAGGCCTATACCAAGCAGAAGTATCCGG...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTAGACGCAGCAGAAGCTTaGCAAACCTGCCTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPYKTPPRKVSCVERLSLDAAEA*QTCLAV Trigger: AACAGCCAGGCAGGTTTGCCAAGCTTCTGCTGCGTC...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCATCACATTTTGGGGACTTCTGCCTCACTCTCTaGTCGCTCTCGGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVSCVERLSLLQASHFGDFCLTL*SLSAPL Trigger: CAGAGGAGCCGAGAGCGAGCAGAGAGTGAGGCAGAA...GTCCCCAAAATGTGATGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTAACTACTGGCACATTCTaGCTCACTCTCTGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPYKTPPRKVSCVERLSLTTGTF*LTLCSL Trigger: GAGCGAGCAGAGAGTGAGGCAGAATGTGCCAGTAGT...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCACCATTGGCTTCCCCGTaGGCAAGGCTACTGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTPPRKVSCVERLSLLQAPLASP*ARLLKG Trigger: GCCCTTCAGTAGCCTTGCCCACGGGGAAGCCAATGG...TGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCATCACATTTTGGGGACTGGCAGCGGTTGCGCTaGCGCTTGTCGATGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KVSCVERLSLLQASHFGDWQRLR*RLSMRQ Trigger: TTGTCTCATCGACAAGCGCCAGCGCAACCGCTGCCA...GTCCCCAAAATGTGATGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTACTTGGCAAACCTGCCTaGCTGTTCCGGATACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPYKTPPRKVSCVERLSLLGKPA*LFRILL Trigger: CAGAAGTATCCGGAACAGCCAGGCAGGTTTGCCAAG...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR GCA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGAAAAGTTGCTTATCTaGAGCATGGCATATGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IICTEAWPLFPRTAGKTSEKLLI*SMAYVG Trigger: ACCAACATATGCCATGCTGCAGATAAGCAACTTTTC...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCAGGGTGTCTGTGTAGCTaGGGTGGCTGTCCATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTPPRKVSCVERLSLLQAGCLCS*GGCPLA Trigger: AGCCAATGGACAGCCACCCCAGCTACACAGACACCC...TGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATCAGGTGATCTGCAGTaGGGTCTCCAACATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPYKTPPRKVSCVERLSLSGDLQ*GLQHLH Trigger: ATGGAGATGTTGGAGACCCCACTGCAGATCACCTGA...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCATCACATTTTGGGGACTCTCCAACATCTCCATaGGGAAGCTGTCGATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSCVERLSLLQASHFGDSPTSP*GSCRWE Trigger: CTCCCATCGACAGCTTCCTCATGGAGATGTTGGAGA...GTCCCCAAAATGTGATGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTACCCAGGGCTGGTGGATaGGTAGTTCATATTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPYKTPPRKVSCVERLSLPRAGG*VVHISN Trigger: ATTGGAAATATGAACTACCCATCCACCAGCCCTGGG...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCATCACATTTTGGGGACCTTGGCAAACCTGCCTaGCTGTTCCGGATACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVSCVERLSLLQASHFGDLGKPA*LFRILL Trigger: CAGAAGTATCCGGAACAGCCAGGCAGGTTTGCCAAG...GTCCCCAAAATGTGATGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCACCCAGGGCTGGTGGATaGGTAGTTCATATTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTPPRKVSCVERLSLLQAPRAGG*VVHISN Trigger: ATTGGAAATATGAACTACCCATCCACCAGCCCTGGG...TGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGTGGGGTGGCTGTCCATaGGCTTCCCCGTGGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVQGRATHTHPPRVTLGGWGGCP*ASPWAR Trigger: CCTTGCCCACGGGGAAGCCAATGGACAGCCACCCCA...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTTGGGGTGGCTGTCCATaGGCTTCCCCGTGGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESVQGRATHTHPPRVTLGWGGCP*ASPWAR Trigger: CCTTGCCCACGGGGAAGCCAATGGACAGCCACCCCA...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAAAGTGGGGGATGCGTTaGGCCCACTCAACGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQGRATHTHPPRVTLGGEKWGMR*AHSTRV Trigger: CACCCTCGTTGAGTGGGCCAAACGCATCCCCCACTT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGAGACGCAGCAGAAGCTaGGCAAACCTGCCTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVQGRATHTHPPRVTLGGRRSRS*ANLPGC Trigger: ACAGCCAGGCAGGTTTGCCAAGCTTCTGCTGCGTCT...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAAGACGCAGCAGAAGCTaGGCAAACCTGCCTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VQGRATHTHPPRVTLGGERRSRS*ANLPGC Trigger: ACAGCCAGGCAGGTTTGCCAAGCTTCTGCTGCGTCT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS TCA 90 bp | AACTCTGTAAGGACTCTGTCGAAGATGGAGCCGACTCCCGCGCTGTaGGCGCTGCTCCTGTGCACGTGGAGGCCCGTGGCCAGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSVRTLSKMEPTPAL*ALLLCTWRPVASRM Trigger: CATCCTGCTGGCCACGGGCCTCCACGTGCACAGGAGCAGCGCTCACAGCGCGGGAGTCGGCTCCATCTTCGACAGAGTCCTTACAGAGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAAGACCTGGTAAGGGCTaGATGTCCTCAGAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQGRATHTHPPRVTLGGERPGKG*MSSELL Trigger: CAGCAGCTCTGAGGACATCAAGCCCTTACCAGGTCT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAACGGTTGCGCTGGCGCTaGTCGATGAGACAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VQGRATHTHPPRVTLGGERLRWR*SMRQSL Trigger: CAAAGATTGTCTCATCGACAAGCGCCAGCGCAACCG...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCGGTTGCGCTGGCGCTaGTCGATGAGACAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGRATHTHPPRVTLGGEARLRWR*SMRQSL Trigger: CAAAGATTGTCTCATCGACAAGCGCCAGCGCAACCG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGCGGTTGCGCTGGCGCTaGTCGATGAGACAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVQGRATHTHPPRVTLGGRLRWR*SMRQSL Trigger: CAAAGATTGTCTCATCGACAAGCGCCAGCGCAACCG...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTCCTCTGCCTTTCTTCTaGCACAGCTTCCCGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGRATHTHPPRVTLGGEAPLPFF*HSFPLH Trigger: ATGAAGCGGGAAGCTGTGCAAGAAGAAAGGCAGAGG...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGAGCTGCTGACACTGTaGACCACATTTAGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESVQGRATHTHPPRVTLGELLTL*TTFSWE Trigger: CTCCCAGCTAAATGTGGTCAACAGTGTCAGCAGCTC...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTCCTCTGCCTTTCTTCTaGCACAGCTTCCCGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ESVQGRATHTHPPRVTLGPLPFF*HSFPLH Trigger: ATGAAGCGGGAAGCTGTGCAAGAAGAAAGGCAGAGG...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGCGTAGGATTCTGTCTTaGGTTCCACAGCAAGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVQGRATHTHPPRVTLGGRRILS*VPQQVR Trigger: CCGAACTTGCTGTGGAACCAAAGACAGAATCCTACG...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGGGTTGGATAAACCCTaGGCATCTGGGTTAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VQGRATHTHPPRVTLGGEGLDKP*ASGLNS Trigger: GCTGTTTAACCCAGATGCCAAGGGTTTATCCAACCC...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGAACGAGGGTGAAAAGTaGCTTATCTGCAGCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVQGRATHTHPPRVTLGGNEGEK*LICSMA Trigger: TGCCATGCTGCAGATAAGCAACTTTTCACCCTCGTT...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAAACGAGGGTGAAAAGTaGCTTATCTGCAGCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VQGRATHTHPPRVTLGGENEGEK*LICSMA Trigger: TGCCATGCTGCAGATAAGCAACTTTTCACCCTCGTT...TTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTAACGAGGGTGAAAAGTaGCTTATCTGCAGCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGRATHTHPPRVTLGGEANEGEK*LICSMA Trigger: TGCCATGCTGCAGATAAGCAACTTTTCACCCTCGTT...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGTTGGATAAACCCTaGGCATCTGGGTTAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESVQGRATHTHPPRVTLGGLDKP*ASGLNS Trigger: GCTGTTTAACCCAGATGCCAAGGGTTTATCCAACCC...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS TCA 90 bp | GGGTGGAGCCACCAAGTTGATTCCTGGAGGAGCTGCCAGTGCTCCTaGGGGTGGACCCATGGCAGAAGTGATGACTCTATACGGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWSHQVDSWRSCQCS*GWTHGRSDDSIRRA Trigger: GGCTCTCCGTATAGAGTCATCACTTCTGCCATGGGTCCACCCTCAGGAGCACTGGCAGCTCCTCCAGGAATCAACTTGGTGGCTCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGTTCCTGATGGTCCTTTaGAAGAAGCCTTTGCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: SVQGRATHTHPPRVTLGGFLMVL*KKPLQP Trigger: AGGTTGCAAAGGCTTCTTCAAAAGGACCATCAGGAA...CCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGGGGAAGCTTTCCTGATGGTCCTTTaGAAGAAGCCTTTGCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: QGRATHTHPPRVTLGGEAFLMVL*KKPLQP Trigger: AGGTTGCAAAGGCTTCTTCAAAAGGACCATCAGGAA...AGCTTCCCCACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCAAGTGGGGGATGCGTTaGGCCCACTCAACGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MYRGLATLPKNCRKDLSPKWGMR*AHSTRV Trigger: CACCCTCGTTGAGTGGGCCAAACGCATCCCCCACTT...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS GCA 90 bp | GGGCATGTCTTCGTGGCTACTACTGGCACATTCTGCCTCACTCTCTaGTCGCTCTCGGCTCCTCTGCCTTTCTTCTTGCACAGCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GHVFVATTGTFCLTL*SLSAPLPFFLHSFP Trigger: CGGGAAGCTGTGCAAGAAGAAAGGCAGAGGAGCCGAGAGCGAGCAGAGAGTGAGGCAGAATGTGCCAGTAGTAGCCACGAAGACATGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTGCAGCATGGCATATGTaGGTAACAGGGTCATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESVQGRATHTHPPRVTLGAAWHM*VTGSFV Trigger: AACAAATGACCCTGTTACCAACATATGCCATGCTGC...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTGTGCAGGGTAGGGCCACACACACACACCCGCCCAGGGTCACCCTGGGTTGCATGTCTTTCATCTaGGACACCAACTCTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESVQGRATHTHPPRVTLGCMSFI*DTNSVR Trigger: CCTTACAGAGTTGGTGTCCAAGATGAAAGACATGCA...ACCCAGGGTGACCCTGGGCGGGTGTGTGTGTGTGGCCCTACCCTGCACACTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCCGGTTGCGCTGGCGCTaGTCGATGAGACAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MYRGLATLPKNCRKDLSPRLRWR*SMRQSL Trigger: CAAAGATTGTCTCATCGACAAGCGCCAGCGCAACCG...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCAAGTGGGGGATGCGTTaGGCCCACTCAACGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ICTEAWPLFPRTAGKTSAKWGMR*AHSTRV Trigger: CACCCTCGTTGAGTGGGCCAAACGCATCCCCCACTT...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS CCA 90 bp | TGCCTGGCTGTTCCGGATACTTCTGCTTGGTATAGGCCTCCAGGGTaGCATAAACCTTCTCTCGAAGAGTCTCCACCTCAGAGGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLAVPDTSAWYRPPG*HKPSLEESPPQRGW Trigger: CCAACCCCTCTGAGGTGGAGACTCTTCGAGAGAAGGTTTATGCCACCCTGGAGGCCTATACCAAGCAGAAGTATCCGGAACAGCCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCAGACGCAGCAGAAGCTaGGCAAACCTGCCTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ICTEAWPLFPRTAGKTSARRSRS*ANLPGC Trigger: ACAGCCAGGCAGGTTTGCCAAGCTTCTGCTGCGTCT...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCAGACCTGGTAAGGGCTaGATGTCCTCAGAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ICTEAWPLFPRTAGKTSARPGKG*MSSELL Trigger: CAGCAGCTCTGAGGACATCAAGCCCTTACCAGGTCT...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAACCTCTGCCTTTCTTCTaGCACAGCTTCCCGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QRLGHSSQELPERPQPLKPLPFF*HSFPLH Trigger: ATGAAGCGGGAAGCTGTGCAAGAAGAAAGGCAGAGG...TTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | ATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCCGTAGGATTCTGTCTTaGGTTCCACAGCAAGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: MYRGLATLPKNCRKDLSPRRILS*VPQQVR Trigger: CCGAACTTGCTGTGGAACCAAAGACAGAATCCTACG...GGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS CCA 90 bp | GCAGAAGCTTGGCAAACCTGCCTGGCTGTTCCGGATACTTCTGCTTaGTATAGGCCTCCAGGGTGGCATAAACCTTCTCTCGAAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AEAWQTCLAVPDTSA*YRPPGWHKPSLEES Trigger: AGACTCTTCGAGAGAAGGTTTATGCCACCCTGGAGGCCTATACCAAGCAGAAGTATCCGGAACAGCCAGGCAGGTTTGCCAAGCTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
||
| CDS-3UTR CAA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCGAGCTGCTGACACTGTaGACCACATTTAGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ICTEAWPLFPRTAGKTSAELLTL*TTFSWE Trigger: CTCCCAGCTAAATGTGGTCAACAGTGTCAGCAGCTC...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTCTGCCTTTCTTCTaGCACAGCTTCCCGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ICTEAWPLFPRTAGKTSAPLPFF*HSFPLH Trigger: ATGAAGCGGGAAGCTGTGCAAGAAGAAAGGCAGAGG...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCGTACAAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATGGGGTGGCTGTCCATaGGCTTCCCCGTGGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPYKTPPRKVSCVERLSLWGGCP*ASPWAR Trigger: CCTTGCCCACGGGGAAGCCAATGGACAGCCACCCCA...TAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTTGTACGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCACGTAGGATTCTGTCTTaGGTTCCACAGCAAGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPRRILS*VPQQVR Trigger: CCGAACTTGCTGTGGAACCAAAGACAGAATCCTACG...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCAACGAGGGTGAAAAGTaGCTTATCTGCAGCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ICTEAWPLFPRTAGKTSANEGEK*LICSMA Trigger: TGCCATGCTGCAGATAAGCAACTTTTCACCCTCGTT...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
||
| CDS-3UTR CAA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCTTCCTGATGGTCCTTTaGAAGAAGCCTTTGCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: ICTEAWPLFPRTAGKTSAFLMVL*KKPLQP Trigger: AGGTTGCAAAGGCTTCTTCAAAAGGACCATCAGGAA...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | TTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCGTAGGATTCTGTCTTaGGTTCCACAGCAAGTTCGG | + |
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Preference number: 5 (lower is better) Translates to: LYVQRLGHSSQELPERPQRRILS*VPQQVR Trigger: CCGAACTTGCTGTGGAACCAAAGACAGAATCCTACG...CTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | ATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGCCGCAGCATGGCATATGTaGGTAACAGGGTCATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: ICTEAWPLFPRTAGKTSAAAWHM*VTGSFV Trigger: AACAAATGACCCTGTTACCAACATATGCCATGCTGC...GGCTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCAGCAGCATGGCATATGTaGGTAACAGGGTCATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPAAWHM*VTGSFV Trigger: AACAAATGACCCTGTTACCAACATATGCCATGCTGC...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCAAGAACTGCCGGAAAGACCTCAGCCCCTTAAATAGCAAAGAAGGGCCATGCATGTCTTTCATCTaGGACACCAACTCTGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: LPKNCRKDLSPLNSKEGPCMSFI*DTNSVR Trigger: CCTTACAGAGTTGGTGTCCAAGATGAAAGACATGCA...TGGCCCTTCTTTGCTATTTAAGGGGCTGAGGTCTTTCCGGCAGTTCTTGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | TTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCAGGCAGCATGGCATATGTaGGTAACAGGGTCATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LYVQRLGHSSQELPERPQAAWHM*VTGSFV Trigger: AACAAATGACCCTGTTACCAACATATGCCATGCTGC...CTGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCATTCCTGATGGTCCTTTaGAAGAAGCCTTTGCAACCT | + |
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Preference number: 5 (lower is better) Translates to: IICTEAWPLFPRTAGKTSFLMVL*KKPLQP Trigger: AGGTTGCAAAGGCTTCTTCAAAAGGACCATCAGGAA...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | ATTATATGTACAGAGGCTTGGCCACTCTTCCCAAGAACTGCCGGAAAGACCTCATGCATGTCTTTCATCTaGGACACCAACTCTGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: IICTEAWPLFPRTAGKTSCMSFI*DTNSVR Trigger: CCTTACAGAGTTGGTGTCCAAGATGAAAGACATGCA...TGAGGTCTTTCCGGCAGTTCTTGGGAAGAGTGGCCAAGCCTCTGTACATATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | AAAACTCCACCTAGAAAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCAAAGTGGGGGATGCGTTaGGCCCACTCAACGAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: KTPPRKVSCVERLSLLQAKWGMR*AHSTRV Trigger: CACCCTCGTTGAGTGGGCCAAACGCATCCCCCACTT...TGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTTTCTAGGTGGAGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | AAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCATCACATTTTGGGGACAGACCTGGTAAGGGCTaGATGTCCTCAGAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: KVSCVERLSLLQASHFGDRPGKG*MSSELL Trigger: CAGCAGCTCTGAGGACATCAAGCCCTTACCAGGTCT...GTCCCCAAAATGTGATGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 |
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| CDS-3UTR CAA 90 bp | AAAGTCTCATGTGTAGAAAGGTTGTCTTTATTACAAGCATCACATTTTGGGGACGGGTTGGATAAACCCTaGGCATCTGGGTTAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: KVSCVERLSLLQASHFGDGLDKP*ASGLNS Trigger: GCTGTTTAACCCAGATGCCAAGGGTTTATCCAACCC...GTCCCCAAAATGTGATGCTTGTAATAAAGACAACCTTTCTACACATGAGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 |
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| CDS TCA 72 bp | AGGACTCTGTCGAAGATGGAGCCGACTCCCGCGCTGTaGGCGCTGCTCCTGTGCACGTGGAGGCCCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RTLSKMEPTPAL*ALLLCTWRPVA Trigger: GGCCACGGGCCTCCACGTGCACAGGAGCAGCGCTCACAGCGCGGGAGTCGGCTCCATCTTCGACAGAGTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS GCA 72 bp | TGTCGAAGATGGAGCCGACTCCCGCGCTGTGAGCGCTaGTCCTGTGCACGTGGAGGCCCGTGGCCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CRRWSRLPRCER*SCARGGPWPAG Trigger: TCCTGCTGGCCACGGGCCTCCACGTGCACAGGAGCAGCGCTCACAGCGCGGGAGTCGGCTCCATCTTCGACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS CCA 72 bp | GGTTCCCACAGCACTCAGCGTCCGAGGGGCACTCACTaGGGTGTCTGTGTAGCTGGGGTGGCTGTCCATTGG | + |
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Preference number: 6 (lower is better) Translates to: GSHSTQRPRGTH*GVCVAGVAVHW Trigger: CCAATGGACAGCCACCCCAGCTACACAGACACCCCAGTGAGTGCCCCTCGGACGCTGAGTGCTGTGGGAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS TCA 72 bp | GTGGCTGTCCATTGGCTTCCCCGTGGGCAAGGCTACTaGAGGGCTCATGGACGTCGAGCCAGTGTGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: VAVHWLPRGQGY*RAHGRRASVTR Trigger: CCTGGTCACACTGGCTCGACGTCCATGAGCCCTTCAGTAGCCTTGCCCACGGGGAAGCCAATGGACAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS CCA 72 bp | TTGGCTTCCCCGTGGGCAAGGCTACTGAAGGGCTCATaGACGTCGAGCCAGTGTGACCAGGGGAGCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: LASPWARLLKGS*TSSQCDQGSHQ Trigger: TTGGTGGCTCCCCTGGTCACACTGGCTCGACGTCCATGAGCCCTTCAGTAGCCTTGCCCACGGGGAAGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS CCA 72 bp | CTGTGTAGCTGGGGTGGCTGTCCATTGGCTTCCCCGTaGGCAAGGCTACTGAAGGGCTCATGGACGTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: LCSWGGCPLASP*ARLLKGSWTSS Trigger: GCTCGACGTCCATGAGCCCTTCAGTAGCCTTGCCCACGGGGAAGCCAATGGACAGCCACCCCAGCTACACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS GCA 72 bp | CATTCTGCCTCACTCTCTGCTCGCTCTCGGCTCCTCTaGCTTTCTTCTTGCACAGCTTCCCGCTTCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: HSASLSARSRLL*LSSCTASRFMP Trigger: GGGCATGAAGCGGGAAGCTGTGCAAGAAGAAAGGCAGAGGAGCCGAGAGCGAGCAGAGAGTGAGGCAGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS CAA 90 bp | ACCTTCTCTCGAAGAGTCTCCACCTCAGAGGGGTTGGATAAACCCTaGGCATCTGGGTTAAACAGCACGATGGCCCGTAGGCACCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TFSRRVSTSEGLDKP*ASGLNSTMARRHPS Trigger: GCTGGGGTGCCTACGGGCCATCGTGCTGTTTAACCCAGATGCCAAGGGTTTATCCAACCCCTCTGAGGTGGAGACTCTTCGAGAGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS CAA 72 bp | CGAAGAGTCTCCACCTCAGAGGGGTTGGATAAACCCTaGGCATCTGGGTTAAACAGCACGATGGCCCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RRVSTSEGLDKP*ASGLNSTMARR Trigger: CCTACGGGCCATCGTGCTGTTTAACCCAGATGCCAAGGGTTTATCCAACCCCTCTGAGGTGGAGACTCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS TCA 72 bp | CACCAAGTTGATTCCTGGAGGAGCTGCCAGTGCTCCTaGGGGTGGACCCATGGCAGAAGTGATGACTCTATA | + |
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Preference number: 6 (lower is better) Translates to: HQVDSWRSCQCS*GWTHGRSDDSI Trigger: TATAGAGTCATCACTTCTGCCATGGGTCCACCCTCAGGAGCACTGGCAGCTCCTCCAGGAATCAACTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015987.10 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS CCA 72 bp | TGGCAAACCTGCCTGGCTGTTCCGGATACTTCTGCTTaGTATAGGCCTCCAGGGTGGCATAAACCTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: WQTCLAVPDTSA*YRPPGWHKPSL Trigger: GAGAGAAGGTTTATGCCACCCTGGAGGCCTATACCAAGCAGAAGTATCCGGAACAGCCAGGCAGGTTTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS CCA 72 bp | GTTCCGGATACTTCTGCTTGGTATAGGCCTCCAGGGTaGCATAAACCTTCTCTCGAAGAGTCTCCACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VPDTSAWYRPPG*HKPSLEESPPQ Trigger: CTGAGGTGGAGACTCTTCGAGAGAAGGTTTATGCCACCCTGGAGGCCTATACCAAGCAGAAGTATCCGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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| CDS CAA 72 bp | AGTTCTCCACGTTCATGTCACCGTAGGATTCTGTCTTaGGTTCCACAGCAAGTTCGGCTTCTAGAATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSPRSCHRRILS*VPQQVRLLESS Trigger: AGAGGATTCTAGAAGCCGAACTTGCTGTGGAACCAAAGACAGAATCCTACGGTGACATGAACGTGGAGAACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015987.10 ENSMUST00000111380.2 ENSMUST00000111384.8 ENSMUST00000111386.8 |
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