Pregenerated sensors for RXRB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039656Ensembl transcript IDs: ENSMUST00000044858.16, ENSMUST00000116612.3, ENSMUST00000173354.9, ENSMUST00000174299.9
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGACCAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTaGGCAAGTCCCCTCCTGCTCTGCACCTGTCCCATGGCTCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: ETKRTLLSVARSLAG*ASPLLLCTCPMALP Trigger: GGGCAGAGCCATGGGACAGGTGCAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTGGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR TCA 90 bp | ACAGGAGTCAGAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTaGGAGGATAAAGGCTGTCAGAGCCCTGCTCCCATGATCATCAGC | + |
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Preference number: 1 (lower is better) Translates to: TGVRGRSLLCPICQV*EDKGCQSPAPMIIS Trigger: GCTGATGATCATGGGAGCAGGGCTCTGACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTCTGACTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR TCA 90 bp | ACTGAAGGTAGACATATAGTCCTCACAGGGATCTGGGGTCCCCTCTaGCTTGGAGACCAAACGAACCCTGCTAAGTGTTGCCAGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: TEGRHIVLTGIWGPL*LGDQTNPAKCCQIP Trigger: AGGGATCTGGCAACACTTAGCAGGGTTCGTTTGGTCTCCAAGTCAGAGGGGACCCCAGATCCCTGTGAGGACTATATGTCTACCTTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTCCTGTCCCATGGCTCTaGCCCCTGCCCAGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LWDSPPEGPPCPHAISSPPVPWL*PLPRLK Trigger: CTTGAGCCTGGGCAGGGGGCAGAGCCATGGGACAGG...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTCTGTGGAAATGGGGCTaGCAGGAGTCAGAGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LWDSPPEGPPCPHAISSPLWKWG*QESEAG Trigger: ACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAG...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGTTGGGACAGCCCACCTaGGGGGCCTCCTTGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: PSMSPLAPSLAVLRTREELGQPT*GASLPT Trigger: TGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAA...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTGAGAGGATAAAGGCTGTCCCTGTCCCATGGCTCTaGCCCCTGCCCAGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: EAGPSSAPSVKSERIKAVPVPWL*PLPRLK Trigger: CTTGAGCCTGGGCAGGGGGCAGAGCCATGGGACAGG...GACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCCAAATGAGAAGGAAGCAGGGCAGTGCTTTGTGCTGGGGAGCCAGGATGGGCAAGTCCCCTCCTaGTCTGCACCTGTCCCATGG | + |
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Preference number: 2 (lower is better) Translates to: VRPNEKEAGQCFVLGSQDGQVPS*SAPVPW Trigger: CCATGGGACAGGTGCAGAGCAGGAGGGGACTTGCCC...ATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTTCTCATTTGGCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGCCTGAGGGGCCTCCTTaGCCACATGCCATCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PSMSPLAPSLAVLRTREEPEGPP*PHAISS Trigger: GCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGG...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCAGGTCCCTCCTCTGCCCCATCAACCCTGCTAAGTGTTaGCAGATCCCTGGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TVEMGLTGVRGRSLLCPINPAKC*QIPGRL Trigger: CAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTT...GATGGGGCAGAGGAGGGACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGGGCTGACAGGAGTCAGAGGAAGGAAGCAGGGCAGTaGTTTGTGCTGGGGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LQSDCRRDCGNGADRSQRKEAGQ*FVLGSQ Trigger: CTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTT...CCTCTGACTCCTGTCAGCCCCATTTCCACAGTCCCTCCTGCAGTCAGACTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCAGGTCCCTCCTCTGCCCCATCAGGCTGTCAGAGCCCTaGTCCCATGATCATCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: TVEMGLTGVRGRSLLCPIRLSEP*SHDHQL Trigger: AAGCTGATGATCATGGGAGCAGGGCTCTGACAGCCT...GATGGGGCAGAGGAGGGACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAAAGATCCCTGGCAGGCTaGGCAAGTCCCCTCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LGELCSTLQKGVRPNEKERSLAG*ASPLLL Trigger: GAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCT...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCGTGTTGCCAGATCCCTaGCAGGCTGGGCAAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: FLHLQQPLHYPFILQSDCVLPDP*QAGQVP Trigger: GGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACAC...GCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCAGGTCCCTCCTCTGCCCCATCGGCAGTGCTTTGTGCTaGGGAGCCAGGATGAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TVEMGLTGVRGRSLLCPIGSALC*GARMKN Trigger: ATTCTTCATCCTGGCTCCCCAGCACAAAGCACTGCC...GATGGGGCAGAGGAGGGACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCGGGCAAGTCCCCTCCTaGTCTGCACCTGTCCCATGG | + |
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Preference number: 2 (lower is better) Translates to: VSPHRKLKEQWVPPPPAAGQVPS*SAPVPW Trigger: CCATGGGACAGGTGCAGAGCAGGAGGGGACTTGCCC...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTATTCTTCAGTCTGACTaGAGGAGGGACTGTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LWDSPPEGPPCPHAISSPILQSD*RRDCGN Trigger: ATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAAT...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCAGGTCCCTCCTCTGCCCCATCGAATCACCTGCACCATaGGAGACCCCGACAAATTCA | + |
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Preference number: 2 (lower is better) Translates to: TVEMGLTGVRGRSLLCPIESPAP*ETPTNS Trigger: TGAATTTGTCGGGGTCTCCCATGGTGCAGGTGATTC...GATGGGGCAGAGGAGGGACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | GGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTCTGTGGAAATGGGGCTaGCAGGAGTCAGAGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GSSTSSSPFTTPLFFSLTLWKWG*QESEAG Trigger: ACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAG...AGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGTGCCATCTCCAGCCCTaGCATTTAAGTCAACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PSMSPLAPSLAVLRTREECHLQP*HLSQPG Trigger: CCCAGGTTGACTTAAATGTCAGGGCTGGAGATGGCA...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | CGACAAATTCAGAGACTCAAGGCCACTGAAGGTAGACATATAGTCCTCACAGGGCCTGTCCCATGGCTCTaGCCCCTGCCCAGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: RQIQRLKATEGRHIVLTGPVPWL*PLPRLK Trigger: CTTGAGCCTGGGCAGGGGGCAGAGCCATGGGACAGG...CCCTGTGAGGACTATATGTCTACCTTCAGTGGCCTTGAGTCTCTGAATTTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAAAGGAAGCAGGGCAGTaGTTTGTGCTGGGGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSKEAGQ*FVLGSQ Trigger: CTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTT...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAAGGAAGCAGGGCAGTaGTTTGTGCTGGGGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: QPLHYPFILQSDCRRDCGKEAGQ*FVLGSQ Trigger: CTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTT...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGAGATCCCTGGCAGGCTaGGCAAGTCCCCTCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMRSLAG*ASPLLL Trigger: GAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCT...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTGAGAGGATAAAGGCTGTCGGCAGTGCTTTGTGCTaGGGAGCCAGGATGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: EAGPSSAPSVKSERIKAVGSALC*GARMKN Trigger: ATTCTTCATCCTGGCTCCCCAGCACAAAGCACTGCC...GACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCGGGAGTGAGGCCAAATaGGAAGGAAGCAGGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: VSPHRKLKEQWVPPPPAAGSEAK*EGSRAV Trigger: CACTGCCCTGCTTCCTTCTCATTTGGCCTCACTCCC...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGCTCTTCAGAAGGGAGTaGGGCCAAATGAGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PSMSPLAPSLAVLRTREELFRRE*GQMRRK Trigger: CTTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAG...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAAAACCCTGCTAAGTGTTaGCAGATCCCTGGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGELCSTLQKGVRPNEKENPAKC*QIPGRL Trigger: CAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTT...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGGGCTGACAGGAGTCAGAGGGAATCACCTGCACCATaGGAGACCCCGACAAATTCA | + |
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Preference number: 2 (lower is better) Translates to: LQSDCRRDCGNGADRSQRESPAP*ETPTNS Trigger: TGAATTTGTCGGGGTCTCCCATGGTGCAGGTGATTC...CCTCTGACTCCTGTCAGCCCCATTTCCACAGTCCCTCCTGCAGTCAGACTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAAACCCTGCTAAGTGTTaGCAGATCCCTGGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SPFTTPLFFSLTAGGTVENPAKC*QIPGRL Trigger: CAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTT...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGAAGGAAGCAGGGCAGTaGTTTGTGCTGGGGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMKEAGQ*FVLGSQ Trigger: CTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTT...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAAGGCTGTCAGAGCCCTaGTCCCATGATCATCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSRLSEP*SHDHQL Trigger: AAGCTGATGATCATGGGAGCAGGGCTCTGACAGCCT...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGCAACTTTATGTGCAAGTGAAAGATGGGAGGGAACCCCCAAAAGAGGTCCTGAGGGGCCTCCTTaGCCACATGCCATCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: WKATLCASERWEGTPKRGPEGPP*PHAISS Trigger: GCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGG...ACCTCTTTTGGGGGTTCCCTCCCATCTTTCACTTGCACATAAAGTTGCTTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAGCAACTTTATGTGCAAGTGAAAGATGGGAGGGAACCCCCAAAAGAGGTGTGTTGCCAGATCCCTaGCAGGCTGGGCAAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: WKATLCASERWEGTPKRGVLPDP*QAGQVP Trigger: GGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACAC...ACCTCTTTTGGGGGTTCCCTCCCATCTTTCACTTGCACATAAAGTTGCTTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCAGGCTGTCAGAGCCCTaGTCCCATGATCATCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: VSPHRKLKEQWVPPPPAARLSEP*SHDHQL Trigger: AAGCTGATGATCATGGGAGCAGGGCTCTGACAGCCT...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR CCA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCAGATCCCTGGCAGGCTaGGCAAGTCCCCTCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LSQPGDVQYFFESNSQSLRSLAG*ASPLLL Trigger: GAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCT...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAGCAACTTTATGTGCAAGTGAAAGATGGGAGGGAACCCCCAAAAGAGGTGGGAGTGAGGCCAAATaGGAAGGAAGCAGGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: WKATLCASERWEGTPKRGGSEAK*EGSRAV Trigger: CACTGCCCTGCTTCCTTCTCATTTGGCCTCACTCCC...ACCTCTTTTGGGGGTTCCCTCCCATCTTTCACTTGCACATAAAGTTGCTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCCTCTTCAGAAGGGAGTaGGGCCAAATGAGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VSPHRKLKEQWVPPPPAALFRRE*GQMRRK Trigger: CTTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAG...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAACCCATCTGTCAAGTCTaGGAGGATAAAGGCTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SPFTTPLFFSLTAGGTVEPICQV*EDKGCQ Trigger: CTGACAGCCTTTATCCTCTCAGACTTGACAGATGGG...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAGCAACTTTATGTGCAAGTGAAAGATGGGAGGGAACCCCCAAAAGAGGTCTGTGGAAATGGGGCTaGCAGGAGTCAGAGGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: WKATLCASERWEGTPKRGLWKWG*QESEAG Trigger: ACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAG...ACCTCTTTTGGGGGTTCCCTCCCATCTTTCACTTGCACATAAAGTTGCTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGAAAGCAACTTTATGTGCAAGTGAAAGATGGGAGGGAACCCCCAAAAGAGGTTGCCATCTCCAGCCCTaGCATTTAAGTCAACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: WKATLCASERWEGTPKRGCHLQP*HLSQPG Trigger: CCCAGGTTGACTTAAATGTCAGGGCTGGAGATGGCA...ACCTCTTTTGGGGGTTCCCTCCCATCTTTCACTTGCACATAAAGTTGCTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| 3UTR CCA 72 bp | CGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTaGGCAAGTCCCCTCCTGCTCTGCACCTGTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: RTLLSVARSLAG*ASPLLLCTCPM Trigger: CATGGGACAGGTGCAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTGAGAGGATAAAGGCTGTCAAGCAGGGCAGTGCTTaGTGCTGGGGAGCCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: EAGPSSAPSVKSERIKAVKQGSA*CWGARM Trigger: CATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTT...GACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAAAGCAGGGCAGTGCTTaGTGCTGGGGAGCCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSKQGSA*CWGARM Trigger: CATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTT...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAAAGCAGGGCAGTGCTTaGTGCTGGGGAGCCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SPFTTPLFFSLTAGGTVEKQGSA*CWGARM Trigger: CATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTT...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| 3UTR CCA 72 bp | CTCCCAGTCTCTCCTCACAGGAAATTAAAAGAGCAATaGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCC | + |
|
Preference number: 3 (lower is better) Translates to: LPVSPHRKLKEQ*VPPPPAAPSLP Trigger: GGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGACTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| 3UTR TCA 72 bp | AGACATATAGTCCTCACAGGGATCTGGGGTCCCCTCTaGCTTGGAGACCAAACGAACCCTGCTAAGTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RHIVLTGIWGPL*LGDQTNPAKCC Trigger: GCAACACTTAGCAGGGTTCGTTTGGTCTCCAAGTCAGAGGGGACCCCAGATCCCTGTGAGGACTATATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| 3UTR CCA 72 bp | TTTAACTGGAAAGCAACTTTATGTGCAAGTGAAAGATaGGAGGGAACCCCCAAAAGAGGTCCAGGGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FNWKATLCASER*EGTPKRGPGQK Trigger: TTTTTGCCCTGGACCTCTTTTGGGGGTTCCCTCCCATCTTTCACTTGCACATAAAGTTGCTTTCCAGTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGTGCCACCACCCCCGGTaGCCCCAGGACCCTCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PAKCCQIPGRLGKSPPALCHHPR*PQDPQR Trigger: GCGTTGAGGGTCCTGGGGCCACCGGGGGTGGTGGCA...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTGGTGCTCCAGACACTTaGGGCCGATGGAGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWDSPPEGPPCPHAISSPGAPDT*GRWSGG Trigger: CCCTCCGCTCCATCGGCCTCAAGTGTCTGGAGCACC...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGGGTGCTCCAGACACTTaGGGCCGATGGAGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAKCCQIPGRLGKSPPALGAPDT*GRWSGG Trigger: CCCTCCGCTCCATCGGCCTCAAGTGTCTGGAGCACC...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGTGGGGAGGAGCTGTCTaGGCTTCGGGAATCCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PAKCCQIPGRLGKSPPALWGGAV*ASGIPP Trigger: GGGCGGGATTCCCGAAGCCCAGACAGCTCCTCCCCA...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCATCCGGCTCCAGGGCTTaGTGCTCTCCGGCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSSGSRA*CSPAAA Trigger: GGCGGCGGCCGGAGAGCAGCAAGCCCTGGAGCCGGA...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCCAAATGAGAAGGAAGCAGGGCAGTGCTTTGTGCTGGGGAGCCAGGATACCACCTGGAGGGGGTaGACAGTGCAGGCCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VRPNEKEAGQCFVLGSQDTTWRG*TVQAPD Trigger: GTCCGGGGCCTGCACTGTCCACCCCCTCCAGGTGGT...ATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTTCTCATTTGGCCTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTGGGACCGATCAAAGATaGCTCCCACGCCTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LWDSPPEGPPCPHAISSPGTDQR*LPRLRN Trigger: ATTCCGCAGGCGTGGGAGCCATCTTTGATCGGTCCC...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000173354.9 |
||
| CDS-3UTR TCA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGTGGAGGTGGAGGTGCTaGAGGGGTAAGAGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSMSPLAPSLAVLRTREEWRWRC*RGKRWA Trigger: GGCCCACCTCTTACCCCTTCAGCACCTCCACCTCCA...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCAGGTCCCTCCTCTGCCCCATCGCAATAGGTCTCCAGTaGGGCGTACACCTTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TVEMGLTGVRGRSLLCPIAIGLQ*GVHLLP Trigger: CGGGAGAAGGTGTACGCCTCACTGGAGACCTATTGC...GATGGGGCAGAGGAGGGACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGGACGCGACCCCACAATaGATCTCTTTTCTCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PAKCCQIPGRLGKSPPALDATPQ*ISFLTP Trigger: GGGGGTGAGAAAAGAGATGCATTGTGGGGTCGCGTC...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGTCCGGCTCCAGGGCTTaGTGCTCTCCGGCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMSGSRA*CSPAAA Trigger: GGCGGCGGCCGGAGAGCAGCAAGCCCTGGAGCCGGA...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTTCGGTCCCCGCAGATTaGACAGAGCCGTTTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPSVPAD*TEPFAS Trigger: GCTGGCAAACGGCTCTGTGCAATCTGCGGGGACCGA...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCAGGTCCCTCCTCTGCCCCATCGCAAACCGGCCCTGCTaGTCAGGGTACTTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVEMGLTGVRGRSLLCPIANRPC*SGYFCL Trigger: CAAGCAGAAGTACCCTGAGCAGCAGGGCCGGTTTGC...GATGGGGCAGAGGAGGGACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAGCCCAGTGGCGGGGGTaGCATTGGAGGTGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPLHYPFILQSDCRRDCGAQWRG*HWRWRC Trigger: GCACCTCCACCTCCAATGCCACCCCCGCCACTGGGC...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAACCACCTGGAGGGGGTaGACAGTGCAGGCCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSTTWRG*TVQAPD Trigger: GTCCGGGGCCTGCACTGTCCACCCCCTCCAGGTGGT...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAATGCCACCACCCCCGGTaGCCCCAGGACCCTCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTTPLFFSLTAGGTVECHHPR*PQDPQR Trigger: GCGTTGAGGGTCCTGGGGCCACCGGGGGTGGTGGCA...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTGCAGATGTTAGTCACTaGGTCATTTGGGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWDSPPEGPPCPHAISSPADVSH*VIWAAA Trigger: GGCAGCAGCCCAAATGACCCAGTGACTAACATCTGC...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGGCTCTGTCAGCACCCTaGAGAGGGACCGATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PAKCCQIPGRLGKSPPALALSAP*RGTDQR Trigger: TCTTTGATCGGTCCCTCTCCAGGGTGCTGACAGAGC...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000173354.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTGAGAGGATAAAGGCTGTCCCACCTCTCCAGGGTTaGAGAGGCCCTTGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAGPSSAPSVKSERIKAVPPLQG*RGPWRL Trigger: CAGACGCCAAGGGCCTCTCCAACCCTGGAGAGGTGG...GACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGCCACCTCTCCAGGGTTaGAGAGGCCCTTGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSMSPLAPSLAVLRTREEPPLQG*RGPWRL Trigger: CAGACGCCAAGGGCCTCTCCAACCCTGGAGAGGTGG...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTGCAATAGGTCTCCAGTaGGGCGTACACCTTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPAIGLQ*GVHLLP Trigger: CGGGAGAAGGTGTACGCCTCACTGGAGACCTATTGC...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTGGTAGGGAGGAGAAGTaGGGGATCCTCTTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPGREEK*GILFAH Trigger: GTGGGCAAAGAGGATCCCGCACTTCTCCTCCCTACC...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAGCCCAGTGGCGGGGGTaGCATTGGAGGTGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTTPLFFSLTAGGTVEAQWRG*HWRWRC Trigger: GCACCTCCACCTCCAATGCCACCCCCGCCACTGGGC...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGAGGCCCGGAGAATCCTaGGGGAGCCGGAGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMRPGES*GSRRGQ Trigger: CTGCCCCCTCCGGCTCCCCCAGGATTCTCCGGGCCT...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCACCACCTGGAGGGGGTaGACAGTGCAGGCCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSPHRKLKEQWVPPPPAATTWRG*TVQAPD Trigger: GTCCGGGGCCTGCACTGTCCACCCCCTCCAGGTGGT...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGGCAGATGTTAGTCACTaGGTCATTTGGGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAKCCQIPGRLGKSPPALADVSH*VIWAAA Trigger: GGCAGCAGCCCAAATGACCCAGTGACTAACATCTGC...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGATGGAGGTGGAGGTGCTaGAGGGGTAAGAGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPLHYPFILQSDCRRDCGWRWRC*RGKRWA Trigger: GGCCCACCTCTTACCCCTTCAGCACCTCCACCTCCA...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAGGTGCTCCAGACACTTaGGGCCGATGGAGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFTTPLFFSLTAGGTVEGAPDT*GRWSGG Trigger: CCCTCCGCTCCATCGGCCTCAAGTGTCTGGAGCACC...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGCAGCTGTTTGTCAGCTaGCTGGCAGATGTTAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PAKCCQIPGRLGKSPPALQLFVS*LADVSH Trigger: GTGACTAACATCTGCCAGGCAGCTGACAAACAGCTG...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGGGCTGACAGGAGTCAGAGGGGTAGGGAGGAGAAGTaGGGGATCCTCTTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSDCRRDCGNGADRSQRGREEK*GILFAH Trigger: GTGGGCAAAGAGGATCCCGCACTTCTCCTCCCTACC...CCTCTGACTCCTGTCAGCCCCATTTCCACAGTCCCTCCTGCAGTCAGACTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTATTAAACAGTATGATTaGCCGCAGGCAGCCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWDSPPEGPPCPHAISSPIKQYD*PQAAKL Trigger: GAGCTTGGCTGCCTGCGGGCAATCATACTGTTTAAT...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGGCCAAATGAGAAGGAAGCAGGGCAGTGCTTTGTGCTGGGGAGCCAGGATTTGGCAAACCGGCCCTaGTGCTCAGGGTACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRPNEKEAGQCFVLGSQDLANRP*CSGYFC Trigger: GCAGAAGTACCCTGAGCAGCAGGGCCGGTTTGCCAA...ATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTTCTCATTTGGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGTTGAAGAAGAACAGGTaGTCCAGACACTTGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PAKCCQIPGRLGKSPPALLKKNR*SRHLRP Trigger: CGGCCTCAAGTGTCTGGAGCACCTGTTCTTCTTCAA...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | GAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTGAGAGGATAAAGGCTGTCGGAAGAACTGATGACTaGGAAGGGGGAGCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAGPSSAPSVKSERIKAVGRTDD*EGGAQW Trigger: CCACTGGGCTCCCCCTTCCCAGTCATCAGTTCTTCC...GACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTGGACCCTCAACGCCTTaGTCACTCTTCTGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPGPSTP*SLFCST Trigger: TGTGGAGCAGAAGAGTGACCAAGGCGTTGAGGGTCC...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTCCACCTCTCCAGGGTTaGAGAGGCCCTTGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSTSSSPFTTPLFFSLTPPLQG*RGPWRL Trigger: CAGACGCCAAGGGCCTCTCCAACCCTGGAGAGGTGG...AGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGACCACCTCTCCAGGGTTaGAGAGGCCCTTGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLHYPFILQSDCRRDCGPPLQG*RGPWRL Trigger: CAGACGCCAAGGGCCTCTCCAACCCTGGAGAGGTGG...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGGGCTGACAGGAGTCAGAGGGCACCCGATCAAAGATaGCTCCCACGCCTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQSDCRRDCGNGADRSQRAPDQR*LPRLRN Trigger: ATTCCGCAGGCGTGGGAGCCATCTTTGATCGGGTGC...CCTCTGACTCCTGTCAGCCCCATTTCCACAGTCCCTCCTGCAGTCAGACTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116612.3 ENSMUST00000174299.9 |
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| CDS-3UTR TCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAAACTGTGGAGTTGATCTaGGGGCTGCTGACAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGELCSTLQKGVRPNEKETVELI*GLLTGP Trigger: CGGGCCTGTCAGCAGCCCTCAGATCAACTCCACAGT...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCCACTCAACGAGTGTaGACAGCTGTTTGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPPTQRV*TAVCQL Trigger: CAGCTGACAAACAGCTGTTCACACTCGTTGAGTGGG...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCCTTGGTCACTCTTCTaGTCCACAGCAAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSDCRRDCGNGADRSQRPWSLF*STASSA Trigger: GGCAGAGCTTGCTGTGGAGCAGAAGAGTGACCAAGG...CCTCTGACTCCTGTCAGCCCCATTTCCACAGTCCCTCCTGCAGTCAGACTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTGTGCGGGATCCTCTTTaGCCACTCAACGAGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPVRDPL*PLNECE Trigger: TTCACACTCGTTGAGTGGGCAAAGAGGATCCCGCAC...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAAGCAACTTTATGTGCAAGTGAAAGATGGGAGGGAACCCCCAAAAGAGGTAGGCCCGGAGAATCCTaGGGGAGCCGGAGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WKATLCASERWEGTPKRGRPGES*GSRRGQ Trigger: CTGCCCCCTCCGGCTCCCCCAGGATTCTCCGGGCCT...ACCTCTTTTGGGGGTTCCCTCCCATCTTTCACTTGCACATAAAGTTGCTTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CGACAAATTCAGAGACTCAAGGCCACTGAAGGTAGACATATAGTCCTCACAGGGACCACCTGGAGGGGGTaGACAGTGCAGGCCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQIQRLKATEGRHIVLTGTTWRG*TVQAPD Trigger: GTCCGGGGCCTGCACTGTCCACCCCCTCCAGGTGGT...CCCTGTGAGGACTATATGTCTACCTTCAGTGGCCTTGAGTCTCTGAATTTGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | GTGAGGCCAAATGAGAAGGAAGCAGGGCAGTGCTTTGTGCTGGGGAGCCAGGATGGACCCTCAACGCCTTaGTCACTCTTCTGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VRPNEKEAGQCFVLGSQDGPSTP*SLFCST Trigger: TGTGGAGCAGAAGAGTGACCAAGGCGTTGAGGGTCC...ATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTTCTCATTTGGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR TCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCACTGTGGAGTTGATCTaGGGGCTGCTGACAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSPHRKLKEQWVPPPPAATVELI*GLLTGP Trigger: CGGGCCTGTCAGCAGCCCTCAGATCAACTCCACAGT...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | GAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTGAGAGGATAAAGGCTGTCCCCACTCAACGAGTGTaGACAGCTGTTTGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAGPSSAPSVKSERIKAVPTQRV*TAVCQL Trigger: CAGCTGACAAACAGCTGTTCACACTCGTTGAGTGGG...GACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGGTAGGGAGGAGAAGTaGGGGATCCTCTTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSSTSSSPFTTPLFFSLTGREEK*GILFAH Trigger: GTGGGCAAAGAGGATCCCGCACTTCTCCTCCCTACC...AGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGCAAACCGGCCCTGCTaGTCAGGGTACTTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSANRPC*SGYFCL Trigger: CAAGCAGAAGTACCCTGAGCAGCAGGGCCGGTTTGC...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCATTGGCAAACCGGCCCTaGTGCTCAGGGTACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSLANRP*CSGYFC Trigger: GCAGAAGTACCCTGAGCAGCAGGGCCGGTTTGCCAA...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGATTGGCAAACCGGCCCTaGTGCTCAGGGTACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPLHYPFILQSDCRRDCGLANRP*CSGYFC Trigger: GCAGAAGTACCCTGAGCAGCAGGGCCGGTTTGCCAA...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTTTGAAGAAGAACAGGTaGTCCAGACACTTGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPLKKNR*SRHLRP Trigger: CGGCCTCAAGTGTCTGGAGCACCTGTTCTTCTTCAA...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAAGGAAGAACTGATGACTaGGAAGGGGGAGCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGELCSTLQKGVRPNEKEGRTDD*EGGAQW Trigger: CCACTGGGCTCCCCCTTCCCAGTCATCAGTTCTTCC...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAGGAAGAACTGATGACTaGGAAGGGGGAGCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLHYPFILQSDCRRDCGGRTDD*EGGAQW Trigger: CCACTGGGCTCCCCCTTCCCAGTCATCAGTTCTTCC...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCAGGCCCGGAGAATCCTaGGGGAGCCGGAGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQPGDVQYFFESNSQSLRPGES*GSRRGQ Trigger: CTGCCCCCTCCGGCTCCCCCAGGATTCTCCGGGCCT...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCTGCCACCACCCCCGGTaGCCCCAGGACCCTCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQPGDVQYFFESNSQSLCHHPR*PQDPQR Trigger: GCGTTGAGGGTCCTGGGGCCACCGGGGGTGGTGGCA...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAAGCACCCGATCAAAGATaGCTCCCACGCCTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGELCSTLQKGVRPNEKEAPDQR*LPRLRN Trigger: ATTCCGCAGGCGTGGGAGCCATCTTTGATCGGGTGC...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116612.3 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGACTGTGGAGTTGATCTaGGGGCTGCTGACAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMTVELI*GLLTGP Trigger: CGGGCCTGTCAGCAGCCCTCAGATCAACTCCACAGT...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAGCAATAGGTCTCCAGTaGGGCGTACACCTTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPFTTPLFFSLTAGGTVEAIGLQ*GVHLLP Trigger: CGGGAGAAGGTGTACGCCTCACTGGAGACCTATTGC...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCCCGCCTCCCTTTTCATaGCAGTGGCCAGGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPHRKLKEQWVPPPPAAPPPFS*QWPGTS Trigger: AGAAGTGCCTGGCCACTGGCATGAAAAGGGAGGCGG...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAACCGCCTCCCTTTTCATaGCAGTGGCCAGGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPFTTPLFFSLTAGGTVEPPPFS*QWPGTS Trigger: AGAAGTGCCTGGCCACTGGCATGAAAAGGGAGGCGG...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAACCTTGGTCACTCTTCTaGTCCACAGCAAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGELCSTLQKGVRPNEKEPWSLF*STASSA Trigger: GGCAGAGCTTGCTGTGGAGCAGAAGAGTGACCAAGG...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCGGTAGGGAGGAGAAGTaGGGGATCCTCTTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSPHRKLKEQWVPPPPAAGREEK*GILFAH Trigger: GTGGGCAAAGAGGATCCCGCACTTCTCCTCCCTACC...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGCAGGGTACTTCTGCTTaGAATAGGTCTCCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSMSPLAPSLAVLRTREEQGTSA*NRSPVR Trigger: CCTCACTGGAGACCTATTGCAAGCAGAAGTACCCTG...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTGAGAGGATAAAGGCTGTCCAGGGTACTTCTGCTTaGAATAGGTCTCCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAGPSSAPSVKSERIKAVQGTSA*NRSPVR Trigger: CCTCACTGGAGACCTATTGCAAGCAGAAGTACCCTG...GACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCGCAAACCGGCCCTGCTaGTCAGGGTACTTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSPHRKLKEQWVPPPPAAANRPC*SGYFCL Trigger: CAAGCAGAAGTACCCTGAGCAGCAGGGCCGGTTTGC...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCACTGAGAAAGGGGATTTaGGGAGGAGCTGTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSLRKGI*GGAVWA Trigger: AGCCCAGACAGCTCCTCCCCAAATCCCCTTTCTCAG...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAACTGAGAAAGGGGATTTaGGGAGGAGCTGTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGELCSTLQKGVRPNEKELRKGI*GGAVWA Trigger: AGCCCAGACAGCTCCTCCCCAAATCCCCTTTCTCAG...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAGGAAGAACTGATGACTaGGAAGGGGGAGCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFTTPLFFSLTAGGTVEGRTDD*EGGAQW Trigger: CCACTGGGCTCCCCCTTCCCAGTCATCAGTTCTTCC...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGGACCCTCAACGCCTTaGTCACTCTTCTGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSTSSSPFTTPLFFSLTGPSTP*SLFCST Trigger: TGTGGAGCAGAAGAGTGACCAAGGCGTTGAGGGTCC...AGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCGGGACCGATCAAAGATaGCTCCCACGCCTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPHRKLKEQWVPPPPAAGTDQR*LPRLRN Trigger: ATTCCGCAGGCGTGGGAGCCATCTTTGATCGGTCCC...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000173354.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGCTCTGTCAGCACCCTaGAGAGGGACCGATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSALSAP*RGTDQR Trigger: TCTTTGATCGGTCCCTCTCCAGGGTGCTGACAGAGC...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000173354.9 |
||
| CDS-3UTR TCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAACCCACTCAACGAGTGTaGACAGCTGTTTGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGELCSTLQKGVRPNEKEPTQRV*TAVCQL Trigger: CAGCTGACAAACAGCTGTTCACACTCGTTGAGTGGG...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGCAATAGGTCTCCAGTaGGGCGTACACCTTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMAIGLQ*GVHLLP Trigger: CGGGAGAAGGTGTACGCCTCACTGGAGACCTATTGC...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCGGTGCTCCAGACACTTaGGGCCGATGGAGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQPGDVQYFFESNSQSLGAPDT*GRWSGG Trigger: CCCTCCGCTCCATCGGCCTCAAGTGTCTGGAGCACC...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAGACGCGACCCCACAATaGATCTCTTTTCTCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTTPLFFSLTAGGTVEDATPQ*ISFLTP Trigger: GGGGGTGAGAAAAGAGATGCATTGTGGGGTCGCGTC...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGTGCGGGATCCTCTTTaGCCACTCAACGAGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSTSSSPFTTPLFFSLTVRDPL*PLNECE Trigger: TTCACACTCGTTGAGTGGGCAAAGAGGATCCCGCAC...AGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAAGTGCGGGATCCTCTTTaGCCACTCAACGAGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGELCSTLQKGVRPNEKEVRDPL*PLNECE Trigger: TTCACACTCGTTGAGTGGGCAAAGAGGATCCCGCAC...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGGTCCCTCCTCTGCCCCATCTGTCAAGTCTGAGAGGATAAAGGCTGTCATTAAACAGTATGATTaGCCGCAGGCAGCCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EAGPSSAPSVKSERIKAVIKQYD*PQAAKL Trigger: GAGCTTGGCTGCCTGCGGGCAATCATACTGTTTAAT...GACAGCCTTTATCCTCTCAGACTTGACAGATGGGGCAGAGGAGGGACCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGCAAACCGGCCCTGCTaGTCAGGGTACTTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMANRPC*SGYFCL Trigger: CAAGCAGAAGTACCCTGAGCAGCAGGGCCGGTTTGC...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAAGCAGATGTTAGTCACTaGGTCATTTGGGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGELCSTLQKGVRPNEKEADVSH*VIWAAA Trigger: GGCAGCAGCCCAAATGACCCAGTGACTAACATCTGC...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGCCTTGGTCACTCTTCTaGTCCACAGCAAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMPWSLF*STASSA Trigger: GGCAGAGCTTGCTGTGGAGCAGAAGAGTGACCAAGG...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGACAGCTGTTTGTCAGCTaGCTGGCAGATGTTAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLHYPFILQSDCRRDCGQLFVS*LADVSH Trigger: GTGACTAACATCTGCCAGGCAGCTGACAAACAGCTG...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGCAACTTTATGTGCAAGTGAAAGATGGGAGGGAACCCCCAAAAGAGGTCCGCCTCCCTTTTCATaGCAGTGGCCAGGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKATLCASERWEGTPKRGPPPFS*QWPGTS Trigger: AGAAGTGCCTGGCCACTGGCATGAAAAGGGAGGCGG...ACCTCTTTTGGGGGTTCCCTCCCATCTTTCACTTGCACATAAAGTTGCTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAATTGAAGAAGAACAGGTaGTCCAGACACTTGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPFTTPLFFSLTAGGTVELKKNR*SRHLRP Trigger: CGGCCTCAAGTGTCTGGAGCACCTGTTCTTCTTCAA...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGCAGCTGTTTGTCAGCTaGCTGGCAGATGTTAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMQLFVS*LADVSH Trigger: GTGACTAACATCTGCCAGGCAGCTGACAAACAGCTG...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCATTAAACAGTATGATTaGCCGCAGGCAGCCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSPHRKLKEQWVPPPPAAIKQYD*PQAAKL Trigger: GAGCTTGGCTGCCTGCGGGCAATCATACTGTTTAAT...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGTTGAAGAAGAACAGGTaGTCCAGACACTTGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMLKKNR*SRHLRP Trigger: CGGCCTCAAGTGTCTGGAGCACCTGTTCTTCTTCAA...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CGACAAATTCAGAGACTCAAGGCCACTGAAGGTAGACATATAGTCCTCACAGGGGCAGATGTTAGTCACTaGGTCATTTGGGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQIQRLKATEGRHIVLTGADVSH*VIWAAA Trigger: GGCAGCAGCCCAAATGACCCAGTGACTAACATCTGC...CCCTGTGAGGACTATATGTCTACCTTCAGTGGCCTTGAGTCTCTGAATTTGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCTCATGTCACGCATTTTaGACACTAGCTCTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLHLQQPLHYPFILQSDCSCHAF*TLALSA Trigger: TGCTGACAGAGCTAGTGTCCAAAATGCGTGACATGA...GCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTTCATGTCACGCATTTTaGACACTAGCTCTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSTSSSPFTTPLFFSLTSCHAF*TLALSA Trigger: TGCTGACAGAGCTAGTGTCCAAAATGCGTGACATGA...AGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CGACAAATTCAGAGACTCAAGGCCACTGAAGGTAGACATATAGTCCTCACAGGGCAGCTGTTTGTCAGCTaGCTGGCAGATGTTAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQIQRLKATEGRHIVLTGQLFVS*LADVSH Trigger: GTGACTAACATCTGCCAGGCAGCTGACAAACAGCTG...CCCTGTGAGGACTATATGTCTACCTTCAGTGGCCTTGAGTCTCTGAATTTGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | CGACAAATTCAGAGACTCAAGGCCACTGAAGGTAGACATATAGTCCTCACAGGGCAGGGTACTTCTGCTTaGAATAGGTCTCCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQIQRLKATEGRHIVLTGQGTSA*NRSPVR Trigger: CCTCACTGGAGACCTATTGCAAGCAGAAGTACCCTG...CCCTGTGAGGACTATATGTCTACCTTCAGTGGCCTTGAGTCTCTGAATTTGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR TCA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCCCCACTCAACGAGTGTaGACAGCTGTTTGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQPGDVQYFFESNSQSLPTQRV*TAVCQL Trigger: CAGCTGACAAACAGCTGTTCACACTCGTTGAGTGGG...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CCA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGTCATGTCACGCATTTTaGACACTAGCTCTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMSCHAF*TLALSA Trigger: TGCTGACAGAGCTAGTGTCCAAAATGCGTGACATGA...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCCAGGGTACTTCTGCTTaGAATAGGTCTCCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQPGDVQYFFESNSQSLQGTSA*NRSPVR Trigger: CCTCACTGGAGACCTATTGCAAGCAGAAGTACCCTG...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CCA 90 bp | CGACAAATTCAGAGACTCAAGGCCACTGAAGGTAGACATATAGTCCTCACAGGGTCATGTCACGCATTTTaGACACTAGCTCTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQIQRLKATEGRHIVLTGSCHAF*TLALSA Trigger: TGCTGACAGAGCTAGTGTCCAAAATGCGTGACATGA...CCCTGTGAGGACTATATGTCTACCTTCAGTGGCCTTGAGTCTCTGAATTTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTCTCCGGCTCCAGGGCTaGCTGCTCTCCGGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LWDSPPEGPPCPHAISSPLRLQG*LLSGRR Trigger: GCGGCGGCCGGAGAGCAGCAAGCCCTGGAGCCGGAG...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS CCA 90 bp | TGGGCCAGGAGGAGAAGACGGACGGATCCCCTGAGAAAGGGGATTTaGGGAGGAGCTGTCTGGGCTTCGGGAATCCCGCCCGCTGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WARRRRRTDPLRKGI*GGAVWASGIPPAVA Trigger: GGCGACAGCGGGCGGGATTCCCGAAGCCCAGACAGCTCCTCCCCAAATCCCCTTTCTCAGGGGATCCGTCCGTCTTCTCCTCCTGGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGACTCCGGCTCCAGGGCTaGCTGCTCTCCGGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QPLHYPFILQSDCRRDCGLRLQG*LLSGRR Trigger: GCGGCGGCCGGAGAGCAGCAAGCCCTGGAGCCGGAG...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044858.16 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTTTTGTCCTTCCCCCGTaGACGCTCCTCCTGAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: LWDSPPEGPPCPHAISSPFVLPP*TLLLNR Trigger: GCGGTTCAGGAGGAGCGTCAACGGGGGAAGGACAAA...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGACAGCCCACCTGAGGGGCCTCCTTGCCCACATGCCATCTCCAGCCCTTTCCGAATGGTGCGCTaGAAGAAACCCTTGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LWDSPPEGPPCPHAISSPFRMVR*KKPLQP Trigger: GGGCTGCAAGGGTTTCTTCAAGCGCACCATTCGGAA...AGGGCTGGAGATGGCATGTGGGCAAGGAGGCCCCTCAGGTGGGCTGTCCCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTTCCACCTCTCCAGGGTaGGAGAGGCCCTTGGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPSTSPG*ERPLAS Trigger: AGACGCCAAGGGCCTCTCCAACCCTGGAGAGGTGGA...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGGCCAAATGAGAAGGAAGCAGGGCAGTGCTTTGTGCTGGGGAGCCAGGATTCCACCTCTCCAGGGTaGGAGAGGCCCTTGGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VRPNEKEAGQCFVLGSQDSTSPG*ERPLAS Trigger: AGACGCCAAGGGCCTCTCCAACCCTGGAGAGGTGGA...ATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTTCTCATTTGGCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCAGGTCCCTCCTCTGCCCCATCCAGCCAAGCTCTGTCTaGTCCATCCTCATGTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: TVEMGLTGVRGRSLLCPIQPSSV*SILMSR Trigger: GCGTGACATGAGGATGGACAAGACAGAGCTTGGCTG...GATGGGGCAGAGGAGGGACCTGCCTCTGACTCCTGTCAGCCCCATTTCCACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCCTGCTCTGGTGTCGCCAATGAGCTaGAAGAAGAACAGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PAKCCQIPGRLGKSPPALVSPMS*KKNRCS Trigger: GGAGCACCTGTTCTTCTTCAAGCTCATTGGCGACAC...CAGAGCAGGAGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGGCCAAATGAGAAGGAAGCAGGGCAGTGCTTTGTGCTGGGGAGCCAGGATAGGACCCTCAACGCCTaGGTCACTCTTCTGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VRPNEKEAGQCFVLGSQDRTLNA*VTLLLH Trigger: GTGGAGCAGAAGAGTGACCAAGGCGTTGAGGGTCCT...ATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTTCTCATTTGGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTCAGCCAAGCTCTGTCTaGTCCATCCTCATGTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPQPSSV*SILMSR Trigger: GCGTGACATGAGGATGGACAAGACAGAGCTTGGCTG...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CAAACGAACCCTGCTAAGTGTTGCCAGATCCCTGGCAGGCTGGGCAAGTCCCCTGGGTTGGAGAGGCCCTaGGCGTCTGGATTAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTNPAKCCQIPGRLGKSPGLERP*ASGLNS Trigger: ACTGTTTAATCCAGACGCCAAGGGCCTCTCCAACCC...AGGGGACTTGCCCAGCCTGCCAGGGATCTGGCAACACTTAGCAGGGTTCGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGATCCACCTCTCCAGGGTaGGAGAGGCCCTTGGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPLHYPFILQSDCRRDCGSTSPG*ERPLAS Trigger: AGACGCCAAGGGCCTCTCCAACCCTGGAGAGGTGGA...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAATGGGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCATTCGGTCCCCGCAGATaGCACAGAGCCGTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EQWVPPPPAAPSLPLYSSFGPRR*HRAVCQ Trigger: CTGGCAAACGGCTCTGTGCAATCTGCGGGGACCGAA...TGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACCCATTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
||
| CDS-3UTR CAA 90 bp | GGTTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTTTCGGTCCCCGCAGATaGCACAGAGCCGTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSTSSSPFTTPLFFSLTFGPRR*HRAVCQ Trigger: CTGGCAAACGGCTCTGTGCAATCTGCGGGGACCGAA...AGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGGGCTGACAGGAGTCAGAGGCGATTCCGCTGGCGCTaGTCCACTGTACAGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LQSDCRRDCGNGADRSQRRFRWR*STVQSL Trigger: CAAAGACTGTACAGTGGACAAGCGCCAGCGGAATCG...CCTCTGACTCCTGTCAGCCCCATTTCCACAGTCCCTCCTGCAGTCAGACTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | TTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCTTTGTCCTTCCCCCGTaGACGCTCCTCCTGAACCGC | + |
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Preference number: 5 (lower is better) Translates to: FLHLQQPLHYPFILQSDCFVLPP*TLLLNR Trigger: GCGGTTCAGGAGGAGCGTCAACGGGGGAAGGACAAA...GCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGCAGCCAAGCTCTGTCTaGTCCATCCTCATGTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: PSMSPLAPSLAVLRTREEQPSSV*SILMSR Trigger: GCGTGACATGAGGATGGACAAGACAGAGCTTGGCTG...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CCATCAATGTCCCCACTTGCTCCCAGCCTAGCTGTGCTGAGGACTAGGGAAGAGGGGTTGGAGAGGCCCTaGGCGTCTGGATTAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSMSPLAPSLAVLRTREEGLERP*ASGLNS Trigger: ACTGTTTAATCCAGACGCCAAGGGCCTCTCCAACCC...CTCTTCCCTAGTCCTCAGCACAGCTAGGCTGGGAGCAAGTGGGGACATTGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | GTCTCTCCTCACAGGAAATTAAAAGAGCAATGGGTTCCTCCACCTCCAGCAGCCTTTGTCCTTCCCCCGTaGACGCTCCTCCTGAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: VSPHRKLKEQWVPPPPAAFVLPP*TLLLNR Trigger: GCGGTTCAGGAGGAGCGTCAACGGGGGAAGGACAAA...GGCTGCTGGAGGTGGAGGAACCCATTGCTCTTTTAATTTCCTGTGAGGAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAGGACCCTCAACGCCTaGGTCACTCTTCTGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: QPLHYPFILQSDCRRDCGRTLNA*VTLLLH Trigger: GTGGAGCAGAAGAGTGACCAAGGCGTTGAGGGTCCT...TCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAAAGGACCCTCAACGCCTaGGTCACTCTTCTGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LGELCSTLQKGVRPNEKERTLNA*VTLLLH Trigger: GTGGAGCAGAAGAGTGACCAAGGCGTTGAGGGTCCT...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGTCCACCTCTCCAGGGTaGGAGAGGCCCTTGGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMSTSPG*ERPLAS Trigger: AGACGCCAAGGGCCTCTCCAACCCTGGAGAGGTGGA...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCCAAATGAGAAGGAAGCAGGGCAGTGCTTTGTGCTGGGGAGCCAGGATGTGTCGCCAATGAGCTaGAAGAAGAACAGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRPNEKEAGQCFVLGSQDVSPMS*KKNRCS Trigger: GGAGCACCTGTTCTTCTTCAAGCTCATTGGCGACAC...ATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTTCTCATTTGGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAATTCCGAATGGTGCGCTaGAAGAAACCCTTGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGELCSTLQKGVRPNEKEFRMVR*KKPLQP Trigger: GGGCTGCAAGGGTTTCTTCAAGCGCACCATTCGGAA...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | TTCCTCCACCTCCAGCAGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCTTCCGAATGGTGCGCTaGAAGAAACCCTTGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLHLQQPLHYPFILQSDCFRMVR*KKPLQP Trigger: GGGCTGCAAGGGTTTCTTCAAGCGCACCATTCGGAA...GCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCTGCTGGAGGTGGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAACGATTCCGCTGGCGCTaGTCCACTGTACAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGELCSTLQKGVRPNEKERFRWR*STVQSL Trigger: CAAAGACTGTACAGTGGACAAGCGCCAGCGGAATCG...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGCCAAATGAGAAGGAAGCAGGGCAGTGCTTTGTGCTGGGGAGCCAGGATCTCATGTCACGCATTTaGGACACTAGCTCTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRPNEKEAGQCFVLGSQDLMSRI*DTSSVS Trigger: GCTGACAGAGCTAGTGTCCAAAATGCGTGACATGAG...ATCCTGGCTCCCCAGCACAAAGCACTGCCCTGCTTCCTTCTCATTTGGCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CGACAAATTCAGAGACTCAAGGCCACTGAAGGTAGACATATAGTCCTCACAGGGAGGACCCTCAACGCCTaGGTCACTCTTCTGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQIQRLKATEGRHIVLTGRTLNA*VTLLLH Trigger: GTGGAGCAGAAGAGTGACCAAGGCGTTGAGGGTCCT...CCCTGTGAGGACTATATGTCTACCTTCAGTGGCCTTGAGTCTCTGAATTTGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CTGGGGGAGCTCTGTTCCACTCTTCAGAAGGGAGTGAGGCCAAATGAGAAGGAACTCATGTCACGCATTTaGGACACTAGCTCTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGELCSTLQKGVRPNEKELMSRI*DTSSVS Trigger: GCTGACAGAGCTAGTGTCCAAAATGCGTGACATGAG...TTCCTTCTCATTTGGCCTCACTCCCTTCTGAAGAGTGGAACAGAGCTCCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGCAGCCAAGCTCTGTCTaGTCCATCCTCATGTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMQPSSV*SILMSR Trigger: GCGTGACATGAGGATGGACAAGACAGAGCTTGGCTG...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGGGGTTGGAGAGGCCCTaGGCGTCTGGATTAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMGLERP*ASGLNS Trigger: ACTGTTTAATCCAGACGCCAAGGGCCTCTCCAACCC...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCTTCGGTCCCCGCAGATaGCACAGAGCCGTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSQPGDVQYFFESNSQSLFGPRR*HRAVCQ Trigger: CTGGCAAACGGCTCTGTGCAATCTGCGGGGACCGAA...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CGACAAATTCAGAGACTCAAGGCCACTGAAGGTAGACATATAGTCCTCACAGGGCGATTCCGCTGGCGCTaGTCCACTGTACAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RQIQRLKATEGRHIVLTGRFRWR*STVQSL Trigger: CAAAGACTGTACAGTGGACAAGCGCCAGCGGAATCG...CCCTGTGAGGACTATATGTCTACCTTCAGTGGCCTTGAGTCTCTGAATTTGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCTTTGTCCTTCCCCCGTaGACGCTCCTCCTGAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQPGDVQYFFESNSQSLFVLPP*TLLLNR Trigger: GCGGTTCAGGAGGAGCGTCAACGGGGGAAGGACAAA...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | AGCCCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAACTCATGTCACGCATTTaGGACACTAGCTCTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPFTTPLFFSLTAGGTVELMSRI*DTSSVS Trigger: GCTGACAGAGCTAGTGTCCAAAATGCGTGACATGAG...TTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | CCCTTCACTACCCCTTTATTCTTCAGTCTGACTGCAGGAGGGACTGTGGAAATGCTCATGTCACGCATTTaGGACACTAGCTCTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFTTPLFFSLTAGGTVEMLMSRI*DTSSVS Trigger: GCTGACAGAGCTAGTGTCCAAAATGCGTGACATGAG...CATTTCCACAGTCCCTCCTGCAGTCAGACTGAAGAATAAAGGGGTAGTGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCCGATTCCGCTGGCGCTaGTCCACTGTACAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSQPGDVQYFFESNSQSLRFRWR*STVQSL Trigger: CAAAGACTGTACAGTGGACAAGCGCCAGCGGAATCG...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS-3UTR CAA 90 bp | TTAAGTCAACCTGGGGATGTACAGTACTTCTTTGAGTCTAACTCCCAGTCTCTCGTGTCGCCAATGAGCTaGAAGAAGAACAGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQPGDVQYFFESNSQSLVSPMS*KKNRCS Trigger: GGAGCACCTGTTCTTCTTCAAGCTCATTGGCGACAC...GAGAGACTGGGAGTTAGACTCAAAGAAGTACTGTACATCCCCAGGTTGACTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS CAA 72 bp | GCCACCACCCCCGGTGGCCCCAGGACCCTCAACGCCTaGGTCACTCTTCTGCTCCACAGCAAGCTCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATTPGGPRTLNA*VTLLLHSKLCL Trigger: GAGGCAGAGCTTGCTGTGGAGCAGAAGAGTGACCAAGGCGTTGAGGGTCCTGGGGCCACCGGGGGTGGTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS CAA 90 bp | AAGTGCGGGATCCTCTTTGCCCACTCAACGAGTGTGAACAGCTGTTaGTCAGCTGCCTGGCAGATGTTAGTCACTGGGTCATTTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KCGILFAHSTSVNSC*SAAWQMLVTGSFGL Trigger: CAGCCCAAATGACCCAGTGACTAACATCTGCCAGGCAGCTGACAAACAGCTGTTCACACTCGTTGAGTGGGCAAAGAGGATCCCGCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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| CDS CAA 72 bp | ATCCTCTTTGCCCACTCAACGAGTGTGAACAGCTGTTaGTCAGCTGCCTGGCAGATGTTAGTCACTGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ILFAHSTSVNSC*SAAWQMLVTGS Trigger: TGACCCAGTGACTAACATCTGCCAGGCAGCTGACAAACAGCTGTTCACACTCGTTGAGTGGGCAAAGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044858.16 ENSMUST00000116612.3 ENSMUST00000173354.9 ENSMUST00000174299.9 |
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