RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RXFP4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049741

Ensembl transcript IDs: ENSMUST00000063119.5

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp ACCCACACTGCCAGGGTGACCACACGGGCCCAAAAGACTGAGAGGTaGCTACCTGGTCCCACAGCCATGGCTACCACCCAGTATCGCGCG +
Preference number: 5 (lower is better)
Translates to: THTARVTTRAQKTER*LPGPTAMATTQYRA
Trigger: CGCGCGATACTGGGTGGTAGCCATGGCTGTGGGACCAGGTAGTCACCTCTCAGTCTTTTGGGCCCGTGTGGTCACCCTGGCAGTGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 90 bp GAAGCCACCAGGACACGGACAGAGCGGGCTACCACTCGGCTGTCCTaGCATTGTCGTGGCCTGCATCTTTGCTGCCGCTCTAGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: EATRTRTERATTRLS*HCRGLHLCCRSRKA
Trigger: GGCCTTTCTAGAGCGGCAGCAAAGATGCAGGCCACGACAATGGCAGGACAGCCGAGTGGTAGCCCGCTCTGTCCGTGTCCTGGTGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 90 bp AGCTGCCACCCACACTGCCAGGGTGACCACACGGGCCCAAAAGACTaGGAGGTGACTACCTGGTCCCACAGCCATGGCTACCACCCAGTA +
Preference number: 5 (lower is better)
Translates to: SCHPHCQGDHTGPKD*EVTTWSHSHGYHPV
Trigger: TACTGGGTGGTAGCCATGGCTGTGGGACCAGGTAGTCACCTCTCAGTCTTTTGGGCCCGTGTGGTCACCCTGGCAGTGTGGGTGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 90 bp AGCCACTCTCCTGGGTGCTGGCTACCGTTCTCCCGCCTACCTCCTTaGGGGCCATTTGTTCCATGCAGGCCTTCCTTTGAGGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: SHSPGCWLPFSRLPP*GPFVPCRPSFEATV
Trigger: GACTGTGGCCTCAAAGGAAGGCCTGCATGGAACAAATGGCCCTCAAGGAGGTAGGCGGGAGAACGGTAGCCAGCACCCAGGAGAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 90 bp AAGACAGAGGCACACGCCCCACAACTCAACTTCAGCCCCAAAGATTaGTGTGGGCACAGTCACCAGGGCAGCTGCCACCCACACTGCCAG +
Preference number: 5 (lower is better)
Translates to: KTEAHAPQLNFSPKD*CGHSHQGSCHPHCQ
Trigger: CTGGCAGTGTGGGTGGCAGCTGCCCTGGTGACTGTGCCCACAGCAATCTTTGGGGCTGAAGTTGAGTTGTGGGGCGTGTGCCTCTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 90 bp GGACAGAGCGGGCTACCACTCGGCTGTCCTGCCATTGTCGTGGCCTaGATCTTTGCTGCCGCTCTAGAAAGGCCAACAGCAGCAGGTAAC +
Preference number: 5 (lower is better)
Translates to: GQSGLPLGCPAIVVA*IFAAALERPTAAGN
Trigger: GTTACCTGCTGCTGTTGGCCTTTCTAGAGCGGCAGCAAAGATGCAGGCCACGACAATGGCAGGACAGCCGAGTGGTAGCCCGCTCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 90 bp GAGGGCCATTTGTTCCATGCAGGCCTTCCTTTGAGGCCACAGTCTTaGCCAGAGAGCTCTGAAGGAGCTGACAAGAACCTGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: EGHLFHAGLPLRPQS*PESSEGADKNLLGL
Trigger: GAGCCCCAGCAGGTTCTTGTCAGCTCCTTCAGAGCTCTCTGGTCAAGACTGTGGCCTCAAAGGAAGGCCTGCATGGAACAAATGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 90 bp AGGCCAGAACTACCCTCTGTAGCTGGTAAGCTCCCAGCCAGTATCTaGTGGGGAAACGCAGAAGACAGAGGCACACGCCCCACAACTCAA +
Preference number: 5 (lower is better)
Translates to: RPELPSVAGKLPASI*WGNAEDRGTRPTTQ
Trigger: TTGAGTTGTGGGGCGTGTGCCTCTGTCTTCTGCGTTTCCCCAGCAGATACTGGCTGGGAGCTTACCAGCTACAGAGGGTAGTTCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 90 bp GTGGTGGTCAGGACTACCTTGCAGAGGGCACTTCCGAAAGGCCAGTaGAAGTCCATTGCTGACTCGGTTGCCCAGAAAGGGAGAGTAAGG +
Preference number: 5 (lower is better)
Translates to: VVVRTTLQRALPKGQ*KSIADSVAQKGRVR
Trigger: CCTTACTCTCCCTTTCTGGGCAACCGAGTCAGCAATGGACTTCCACTGGCCTTTCGGAAGTGCCCTCTGCAAGGTAGTCCTGACCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 90 bp GGCACCAGGTCAAACCTTACCAGAATTTCCCAGAGAGTGACTACATaGTTGGGAACCCAGCAGAGGGCGAAGGAAGCCACCAGGACACGG +
Preference number: 5 (lower is better)
Translates to: GTRSNLTRISQRVTT*LGTQQRAKEATRTR
Trigger: CCGTGTCCTGGTGGCTTCCTTCGCCCTCTGCTGGGTTCCCAACCATGTAGTCACTCTCTGGGAAATTCTGGTAAGGTTTGACCTGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 90 bp GCCAGGCTGAAGACAAAGGTATCAGAAGACAGGCCGGGCACACGCTaGCCACAGTTACCTAGAACCCACAGTACGGCCAAATTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: ARLKTKVSEDRPGTR*PQLPRTHSTAKFPS
Trigger: GCTGGGAAATTTGGCCGTACTGTGGGTTCTAGGTAACTGTGGTCAGCGTGTGCCCGGCCTGTCTTCTGATACCTTTGTCTTCAGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 90 bp TGTCCCAGGGCACCAGGTCAAACCTTACCAGAATTTCCCAGAGAGTaGCTACATGGTTGGGAACCCAGCAGAGGGCGAAGGAAGCCACCA +
Preference number: 5 (lower is better)
Translates to: CPRAPGQTLPEFPRE*LHGWEPSRGRRKPP
Trigger: TGGTGGCTTCCTTCGCCCTCTGCTGGGTTCCCAACCATGTAGTCACTCTCTGGGAAATTCTGGTAAGGTTTGACCTGGTGCCCTGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 90 bp CCGCCTACCTCCTTGAGGGCCATTTGTTCCATGCAGGCCTTCCTTTaGGGCCACAGTCTTGACCAGAGAGCTCTGAAGGAGCTGACAAGA +
Preference number: 5 (lower is better)
Translates to: PPTSLRAICSMQAFL*GHSLDQRALKELTR
Trigger: TCTTGTCAGCTCCTTCAGAGCTCTCTGGTCAAGACTGTGGCCTCAAAGGAAGGCCTGCATGGAACAAATGGCCCTCAAGGAGGTAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 90 bp CCAGAACTACCCTCTGTAGCTGGTAAGCTCCCAGCCAGTATCTGCTaGGGAAACGCAGAAGACAGAGGCACACGCCCCACAACTCAACTT +
Preference number: 5 (lower is better)
Translates to: PELPSVAGKLPASIC*GNAEDRGTRPTTQL
Trigger: AAGTTGAGTTGTGGGGCGTGTGCCTCTGTCTTCTGCGTTTCCCCAGCAGATACTGGCTGGGAGCTTACCAGCTACAGAGGGTAGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 90 bp AGGTGTTCCATTGTGTTTGTGTGTGTCCTAGAAGAGCCACTCTCCTaGGTGCTGGCTACCGTTCTCCCGCCTACCTCCTTGAGGGCCATT +
Preference number: 5 (lower is better)
Translates to: RCSIVFVCVLEEPLS*VLATVLPPTSLRAI
Trigger: AATGGCCCTCAAGGAGGTAGGCGGGAGAACGGTAGCCAGCACCCAGGAGAGTGGCTCTTCTAGGACACACACAAACACAATGGAACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 90 bp CAAATTTCCCAGCAAGCCAATGATACCTACAAGTCCATAGGCCAGTaGAACCATGATCCTCAGAACAAGGAACTGGACAGGCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: QISQQANDTYKSIGQ*NHDPQNKELDRHGS
Trigger: GCTGCCATGCCTGTCCAGTTCCTTGTTCTGAGGATCATGGTTGCACTGGCCTATGGACTTGTAGGTATCATTGGCTTGCTGGGAAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 72 bp CCCAAAGATTGCTGTGGGCACAGTCACCAGGGCAGCTaGCACCCACACTGCCAGGGTGACCACACGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PKDCCGHSHQGS*HPHCQGDHTGP
Trigger: TGGGCCCGTGTGGTCACCCTGGCAGTGTGGGTGGCAGCTGCCCTGGTGACTGTGCCCACAGCAATCTTTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 72 bp CCACACTGCCAGGGTGACCACACGGGCCCAAAAGACTaGGAGGTGACTACCTGGTCCCACAGCCATGGCTAC +
Preference number: 6 (lower is better)
Translates to: PHCQGDHTGPKD*EVTTWSHSHGY
Trigger: GTAGCCATGGCTGTGGGACCAGGTAGTCACCTCTCAGTCTTTTGGGCCCGTGTGGTCACCCTGGCAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 72 bp GCACACGCCCCACAACTCAACTTCAGCCCCAAAGATTaGTGTGGGCACAGTCACCAGGGCAGCTGCCACCCA +
Preference number: 6 (lower is better)
Translates to: AHAPQLNFSPKD*CGHSHQGSCHP
Trigger: TGGGTGGCAGCTGCCCTGGTGACTGTGCCCACAGCAATCTTTGGGGCTGAAGTTGAGTTGTGGGGCGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 72 bp CGCCCCACAACTCAACTTCAGCCCCAAAGATTGCTGTaGGCACAGTCACCAGGGCAGCTGCCACCCACACTG +
Preference number: 6 (lower is better)
Translates to: RPTTQLQPQRLL*AQSPGQLPPTL
Trigger: CAGTGTGGGTGGCAGCTGCCCTGGTGACTGTGCCCACAGCAATCTTTGGGGCTGAAGTTGAGTTGTGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 72 bp CCTGGGTGCTGGCTACCGTTCTCCCGCCTACCTCCTTaGGGGCCATTTGTTCCATGCAGGCCTTCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: PGCWLPFSRLPP*GPFVPCRPSFE
Trigger: CTCAAAGGAAGGCCTGCATGGAACAAATGGCCCTCAAGGAGGTAGGCGGGAGAACGGTAGCCAGCACCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 72 bp CTACCCTCTGTAGCTGGTAAGCTCCCAGCCAGTATCTaGTGGGGAAACGCAGAAGACAGAGGCACACGCCCC +
Preference number: 6 (lower is better)
Translates to: LPSVAGKLPASI*WGNAEDRGTRP
Trigger: GGGGCGTGTGCCTCTGTCTTCTGCGTTTCCCCAGCAGATACTGGCTGGGAGCTTACCAGCTACAGAGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 72 bp GGGCTACCACTCGGCTGTCCTGCCATTGTCGTGGCCTaGATCTTTGCTGCCGCTCTAGAAAGGCCAACAGCA +
Preference number: 6 (lower is better)
Translates to: GLPLGCPAIVVA*IFAAALERPTA
Trigger: TGCTGTTGGCCTTTCTAGAGCGGCAGCAAAGATGCAGGCCACGACAATGGCAGGACAGCCGAGTGGTAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 72 bp CCCTCTGTAGCTGGTAAGCTCCCAGCCAGTATCTGCTaGGGAAACGCAGAAGACAGAGGCACACGCCCCACA +
Preference number: 6 (lower is better)
Translates to: PSVAGKLPASIC*GNAEDRGTRPT
Trigger: TGTGGGGCGTGTGCCTCTGTCTTCTGCGTTTCCCCAGCAGATACTGGCTGGGAGCTTACCAGCTACAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 72 bp GAGGGCACTTCCGAAAGGCCAGTGGAAGTCCATTGCTaGCTCGGTTGCCCAGAAAGGGAGAGTAAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: EGTSERPVEVHC*LGCPERESKGQ
Trigger: CTGGCCCTTACTCTCCCTTTCTGGGCAACCGAGTCAGCAATGGACTTCCACTGGCCTTTCGGAAGTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CAA 72 bp GGCTACCGTTCTCCCGCCTACCTCCTTGAGGGCCATTaGTTCCATGCAGGCCTTCCTTTGAGGCCACAGTCT +
Preference number: 6 (lower is better)
Translates to: GYRSPAYLLEGH*FHAGLPLRPQS
Trigger: AGACTGTGGCCTCAAAGGAAGGCCTGCATGGAACAAATGGCCCTCAAGGAGGTAGGCGGGAGAACGGTAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 72 bp AGGACTACCTTGCAGAGGGCACTTCCGAAAGGCCAGTaGAAGTCCATTGCTGACTCGGTTGCCCAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: RTTLQRALPKGQ*KSIADSVAQKG
Trigger: CCCTTTCTGGGCAACCGAGTCAGCAATGGACTTCCACTGGCCTTTCGGAAGTGCCCTCTGCAAGGTAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 72 bp ATTGTGTTTGTGTGTGTCCTAGAAGAGCCACTCTCCTaGGTGCTGGCTACCGTTCTCCCGCCTACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: IVFVCVLEEPLS*VLATVLPPTSL
Trigger: CAAGGAGGTAGGCGGGAGAACGGTAGCCAGCACCCAGGAGAGTGGCTCTTCTAGGACACACACAAACACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CAA 90 bp ACCAGGTCAAACCTTACCAGAATTTCCCAGAGAGTGACTACATGGTaGGGAACCCAGCAGAGGGCGAAGGAAGCCACCAGGACACGGACA +
Preference number: 6 (lower is better)
Translates to: TRSNLTRISQRVTTW*GTQQRAKEATRTRT
Trigger: TGTCCGTGTCCTGGTGGCTTCCTTCGCCCTCTGCTGGGTTCCCAACCATGTAGTCACTCTCTGGGAAATTCTGGTAAGGTTTGACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 72 bp GCACCAGGTCAAACCTTACCAGAATTTCCCAGAGAGTaGCTACATGGTTGGGAACCCAGCAGAGGGCGAAGG +
Preference number: 6 (lower is better)
Translates to: APGQTLPEFPRE*LHGWEPSRGRR
Trigger: CCTTCGCCCTCTGCTGGGTTCCCAACCATGTAGTCACTCTCTGGGAAATTCTGGTAAGGTTTGACCTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 72 bp TCCTTGAGGGCCATTTGTTCCATGCAGGCCTTCCTTTaGGGCCACAGTCTTGACCAGAGAGCTCTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: SLRAICSMQAFL*GHSLDQRALKE
Trigger: CTCCTTCAGAGCTCTCTGGTCAAGACTGTGGCCTCAAAGGAAGGCCTGCATGGAACAAATGGCCCTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS TCA 72 bp TTGTTCCATGCAGGCCTTCCTTTGAGGCCACAGTCTTaGCCAGAGAGCTCTGAAGGAGCTGACAAGAACCTG +
Preference number: 6 (lower is better)
Translates to: LFHAGLPLRPQS*PESSEGADKNL
Trigger: CAGGTTCTTGTCAGCTCCTTCAGAGCTCTCTGGTCAAGACTGTGGCCTCAAAGGAAGGCCTGCATGGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS CCA 72 bp TCAAACCTTACCAGAATTTCCCAGAGAGTGACTACATaGTTGGGAACCCAGCAGAGGGCGAAGGAAGCCACC +
Preference number: 6 (lower is better)
Translates to: SNLTRISQRVTT*LGTQQRAKEAT
Trigger: GGTGGCTTCCTTCGCCCTCTGCTGGGTTCCCAACCATGTAGTCACTCTCTGGGAAATTCTGGTAAGGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 72 bp CAGCAAGCCAATGATACCTACAAGTCCATAGGCCAGTaGAACCATGATCCTCAGAACAAGGAACTGGACAGG +
Preference number: 6 (lower is better)
Translates to: QQANDTYKSIGQ*NHDPQNKELDR
Trigger: CCTGTCCAGTTCCTTGTTCTGAGGATCATGGTTGCACTGGCCTATGGACTTGTAGGTATCATTGGCTTGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5
CDS GCA 72 bp GCCCCTGATAGGTCTCAGAAAGGAGAGTGTTCAGGCTaGATCCTTCATCCAGGTGTTCCATTGTGTTTGTGT +
Preference number: 6 (lower is better)
Translates to: APDRSQKGECSG*ILHPGVPLCLC
Trigger: ACACAAACACAATGGAACACCTGGATGAAGGATGCAGCCTGAACACTCTCCTTTCTGAGACCTATCAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063119.5