Pregenerated sensors for RXFP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060735Ensembl transcript IDs: ENSMUST00000058007.7
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGCTCTCTTTGGCACCTCATGCCACTGCCTAAAGACTCCCGGTaGCATCTCTGCTCAGATGCGTGGTATGGCGAGGAGGAGATCAGT | + |
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Preference number: 1 (lower is better) Translates to: QCSLWHLMPLPKDSR*HLCSDAWYGEEEIS Trigger: ACTGATCTCCTCCTCGCCATACCACGCATCTGAGCAGAGATGTCACCGGGAGTCTTTAGGCAGTGGCATGAGGTGCCAAAGAGAGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 90 bp | AAGGGAGCCAGAATGGGAACAGGGAAGAAACGTGAAGGTAGGAGCTaGTGTAGAAGCCATGGAAGAGTGGTGCTTACTGGCTTGCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: KGARMGTGKKREGRS*CRSHGRVVLTGLLP Trigger: GGGGAGCAAGCCAGTAAGCACCACTCTTCCATGGCTTCTACATCAGCTCCTACCTTCACGTTTCTTCCCTGTTCCCATTCTGGCTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 90 bp | CTCTGTTTCGTACCCTCTAATCACAGTGCTCTCTTTGGCACCTCATaGCACTGCCTAAAGACTCCCGGTGACATCTCTGCTCAGATGCGT | + |
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Preference number: 1 (lower is better) Translates to: LCFVPSNHSALFGTS*HCLKTPGDISAQMR Trigger: ACGCATCTGAGCAGAGATGTCACCGGGAGTCTTTAGGCAGTGGCATGAGGTGCCAAAGAGAGCACTGTGATTAGAGGGTACGAAACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 90 bp | CAGACTGTTCCTAGAACTGAGCTGTCACGAGGAGTGGCCTCACTCTaGAGAGACAGCCCTGCAGCTGTCCTGCATATTCAGATGAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: QTVPRTELSRGVASL*RDSPAAVLHIQMSK Trigger: TTTACTCATCTGAATATGCAGGACAGCTGCAGGGCTGTCTCTGCAGAGTGAGGCCACTCCTCGTGACAGCTCAGTTCTAGGAACAGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CCA 90 bp | AGGTATTCCTTCCTTAATGTGATTTCTGCAGGGACAGTCCTCCTCTaGCGCCGTCACAGTGCTCTTCCCCACATCCCTTTCCCAGGAATT | + |
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Preference number: 1 (lower is better) Translates to: RYSFLNVISAGTVLL*RRHSALPHIPFPGI Trigger: AATTCCTGGGAAAGGGATGTGGGGAAGAGCACTGTGACGGCGCCAGAGGAGGACTGTCCCTGCAGAAATCACATTAAGGAAGGAATACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 90 bp | CTTGCTTGGGACACTCCCAGGTCAAAGAGCTTAGGAAAGGCTATATaGGCACCAACTCCTACACAACTCAATCCCTCTGCTTCTCTGATC | + |
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Preference number: 1 (lower is better) Translates to: LAWDTPRSKSLGKAI*APTPTQLNPSASLI Trigger: GATCAGAGAAGCAGAGGGATTGAGTTGTGTAGGAGTTGGTGCTCATATAGCCTTTCCTAAGCTCTTTGACCTGGGAGTGTCCCAAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 90 bp | CCTCACTCTGCAGAGACAGCCCTGCAGCTGTCCTGCATATTCAGATaGGTAAAATATTCAAGCCCCTGGAACTTGGTTAGGGTAGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: PHSAETALQLSCIFR*VKYSSPWNLVRVVY Trigger: GTAGACTACCCTAACCAAGTTCCAGGGGCTTGAATATTTTACTCATCTGAATATGCAGGACAGCTGCAGGGCTGTCTCTGCAGAGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 90 bp | AAAGAGCAATCTTCGGCTTCTAGAGAACAACTAGACAGCATCTCCTaGGCTTCTAACATCATTGAACCATCTCTCTATCTGCCAATCCAG | + |
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Preference number: 1 (lower is better) Translates to: KEQSSASREQLDSIS*ASNIIEPSLYLPIQ Trigger: CTGGATTGGCAGATAGAGAGATGGTTCAATGATGTTAGAAGCGCAGGAGATGCTGTCTAGTTGTTCTCTAGAAGCCGAAGATTGCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 90 bp | TTAACTTCTCATTCTTTCCCAGATGGTTACAGCAAGTTAGATGCTTaGTTGGGACACTCCCAGGTCAAAGAGCTTAGGAAAGGCTATATG | + |
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Preference number: 1 (lower is better) Translates to: LTSHSFPDGYSKLDA*LGHSQVKELRKGYM Trigger: CATATAGCCTTTCCTAAGCTCTTTGACCTGGGAGTGTCCCAAGCAAGCATCTAACTTGCTGTAACCATCTGGGAAAGAATGAGAAGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CCA 90 bp | AAAACACTAGAGCCAAAAGGCAAGTTCATGAAGAAAGGGCTTATTTaGCTTGCACGTCTACATTATAGTTCATCACTGAAGGGAGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: KTLEPKGKFMKKGLI*LARLHYSSSLKGAR Trigger: TCTGGCTCCCTTCAGTGATGAACTATAATGTAGACGTGCAAGCCAAATAAGCCCTTTCTTCATGAACTTGCCTTTTGGCTCTAGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGCTCAGATGCGTGGTATGGCGAGGAGGAGATCAGTCTCAGCTCGTGCACGCTGCTTGCTCTATCTaGTCCCAGGTATTCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SLLRCVVWRGGDQSQLVHAACSI*SQVFLP Trigger: AGGAAGGAATACCTGGGACCAGATAGAGCAAGCAGC...GTGCACGAGCTGAGACTGATCTCCTCCTCGCCATACCACGCATCTGAGCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR TCA 90 bp | TCCCCCATGGGTTTCTCAGCTTGCTTTGCTATAGAACCTAGGACCACTAGACAGCCTAAAGACTCCCGGTaGCATCTCTGCTCAGATGCG | + |
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Preference number: 2 (lower is better) Translates to: SPMGFSACFAIEPRTTRQPKDSR*HLCSDA Trigger: CGCATCTGAGCAGAGATGTCACCGGGAGTCTTTAGG...CTGTCTAGTGGTCCTAGGTTCTATAGCAAAGCAAGCTGAGAAACCCATGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCTTACTGGCTTGCTCCCCCATGGGTTTCTCAGCTTGCTTTGCTATAGAAAGCTGTCACGAGGAGTaGCCTCACTCTGCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: WCLLACSPMGFSACFAIESCHEE*PHSAET Trigger: TGTCTCTGCAGAGTGAGGCCACTCCTCGTGACAGCT...TTCTATAGCAAAGCAAGCTGAGAAACCCATGGGGGAGCAAGCCAGTAAGCACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CCA 90 bp | TTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCCAGTCAGCTCGGTTCTCCTTCCCCAGCTTCTaGGTGTCCCAGTGTTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: LNHLSICQSSLSSQSARFSFPSF*VSQCSA Trigger: CGCTGAACACTGGGACACCCAGAAGCTGGGGAAGGA...GAACCGAGCTGACTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCAATCCAGTTTATCATCCCAGTCAGCTCGGTTCCCAAAGAGTAAGGAGGAGCAAGTTAGATGCTTaGTTGGGACACTCCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SANPVYHPSQLGSQRVRRSKLDA*LGHSQV Trigger: GACCTGGGAGTGTCCCAAGCAAGCATCTAACTTGCT...CCTCCTTACTCTTTGGGAACCGAGCTGACTGGGATGATAAACTGGATTGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTGCACGTCTACATTATAGTTCATCACTGAAGGGAGCCAGAATGGGAACAACAACTCAATCCCTCTaGTTCTCTGATCCTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: WLARLHYSSSLKGARMGTTTQSL*FSDPSP Trigger: TGGGGAAGGATCAGAGAAGCAGAGGGATTGAGTTGT...TGTTCCCATTCTGGCTCCCTTCAGTGATGAACTATAATGTAGACGTGCAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CAA 90 bp | ACTTCTCATTCTTTCCCAGATGGTTACAGCAAGTTAGATGCTTGCTaGGGACACTCCCAGGTCAAAGAGCTTAGGAAAGGCTATATGAGC | + |
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Preference number: 2 (lower is better) Translates to: TSHSFPDGYSKLDAC*GHSQVKELRKGYMS Trigger: GCTCATATAGCCTTTCCTAAGCTCTTTGACCTGGGAGTGTCCCAAGCAAGCATCTAACTTGCTGTAACCATCTGGGAAAGAATGAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR TCA 90 bp | TGGTGCTTACTGGCTTGCTCCCCCATGGGTTTCTCAGCTTGCTTTGCTATAGAAAGTCTACTCAAGTTCTaGCTCTCACCTTCTTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: WCLLACSPMGFSACFAIESLLKF*LSPSFV Trigger: AACAAAAGAAGGTGAGAGTCAGAACTTGAGTAGACT...TTCTATAGCAAAGCAAGCTGAGAAACCCATGGGGGAGCAAGCCAGTAAGCACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CCA 90 bp | CTTCTAACATCATTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCCAGTGCAGAAATGGGGCTTaGGATAGAAGGCATGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: LLTSLNHLSICQSSLSSQCRNGA*DRRHGV Trigger: CACTCCATGCCTTCTATCCCAAGCCCCATTTCTGCA...CTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAATGATGTTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTGCACGTCTACATTATAGTTCATCACTGAAGGGAGCCAGAATGGGAACACACCCTTTGTTGTTCTaGTTGCTAGCCAATACCAAT | + |
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Preference number: 2 (lower is better) Translates to: WLARLHYSSSLKGARMGTHPLLF*LLANTN Trigger: ATTGGTATTGGCTAGCAACCAGAACAACAAAGGGTG...TGTTCCCATTCTGGCTCCCTTCAGTGATGAACTATAATGTAGACGTGCAAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR GCA 90 bp | TGTAACAGTGCAATTTTGACAAAATTATCAACCAATCCCATAGTTCAGAAGGTCTTACAGCAAGTTAGATaGTTGCTTGGGACACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: CNSAILTKLSTNPIVQKVLQQVR*LLGTLP Trigger: TGGGAGTGTCCCAAGCAAGCATCTAACTTGCTGTAA...GACCTTCTGAACTATGGGATTGGTTGATAATTTTGTCAAAATTGCACTGTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CAA 90 bp | AATTTTGACAAAATTATCAACCAATCCCATAGTTCAGAAGGTCATTaGAGCAGCAAGGCTTCTCTAATGGTCCCTTATGGTATTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: NFDKIINQSHSSEGH*SSKASLMVPYGIKV Trigger: CACTTTAATACCATAAGGGACCATTAGAGAAGCCTTGCTGCTCAAATGACCTTCTGAACTATGGGATTGGTTGATAATTTTGTCAAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | TTCTGCAGGGACAGTCCTCCTCTGGCGCCGTCACAGTaGTCTTCCCCACATCCCTTTCCCAGGAATTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: FCRDSPPLAPSQ*SSPHPFPRNFS Trigger: GGAGAAATTCCTGGGAAAGGGATGTGGGGAAGAGCACTGTGACGGCGCCAGAGGAGGACTGTCCCTGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CCA 72 bp | TCCCACACCCCCAGCAGAGCTTTTCCGGATGCTTGCTaGTTCACCTCCAACAATAGACCAGAGCGCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: SHTPSRAFPDAC*FTSNNRPERQV Trigger: GACCTGGCGCTCTGGTCTATTGTTGGAGGTGAACCAGCAAGCATCCGGAAAAGCTCTGCTGGGGGTGTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CCA 72 bp | CTCAGACTGTTCCTAGAACTGAGCTGTCACGAGGAGTaGCCTCACTCTGCAGAGACAGCCCTGCAGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: LRLFLELSCHEE*PHSAETALQLS Trigger: GGACAGCTGCAGGGCTGTCTCTGCAGAGTGAGGCCACTCCTCGTGACAGCTCAGTTCTAGGAACAGTCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 72 bp | CTTTGGCACCTCATGCCACTGCCTAAAGACTCCCGGTaGCATCTCTGCTCAGATGCGTGGTATGGCGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: LWHLMPLPKDSR*HLCSDAWYGEE Trigger: CTCCTCGCCATACCACGCATCTGAGCAGAGATGTCACCGGGAGTCTTTAGGCAGTGGCATGAGGTGCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | TGTTCCCACACCCCCAGCAGAGCTTTTCCGGATGCTTaGTGGTTCACCTCCAACAATAGACCAGAGCGCCAG | + |
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Preference number: 3 (lower is better) Translates to: CSHTPSRAFPDA*WFTSNNRPERQ Trigger: CTGGCGCTCTGGTCTATTGTTGGAGGTGAACCAGCAAGCATCCGGAAAAGCTCTGCTGGGGGTGTGGGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | CCTAGAACTGAGCTGTCACGAGGAGTGGCCTCACTCTaGAGAGACAGCCCTGCAGCTGTCCTGCATATTCAG | + |
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Preference number: 3 (lower is better) Translates to: PRTELSRGVASL*RDSPAAVLHIQ Trigger: CTGAATATGCAGGACAGCTGCAGGGCTGTCTCTGCAGAGTGAGGCCACTCCTCGTGACAGCTCAGTTCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CCA 72 bp | TCCCAGTGTTCAGCGCGCACGTGCAGAAATGGGGCTTaGGATAGAAGGCATGGAGTGGGAACTAGGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SQCSARTCRNGA*DRRHGVGTRRQ Trigger: TTGCCTCCTAGTTCCCACTCCATGCCTTCTATCCCAAGCCCCATTTCTGCACGTGCGCGCTGAACACTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | GCGTGGTATGGCGAGGAGGAGATCAGTCTCAGCTCGTaGACATTAGCCCTGTCGAGGGTGATAAAGGATACC | + |
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Preference number: 3 (lower is better) Translates to: AWYGEEEISLSS*TLALSRVIKDT Trigger: GGTATCCTTTATCACCCTCGACAGGGCTAATGTGCACGAGCTGAGACTGATCTCCTCCTCGCCATACCACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGCTCAGATGCGTGGTATGGCGAGGAGGAGATCAGTCTCAGCTCGTGCACTCCCTCTCCTTTTCCTaGAAAGACCTTGAGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SLLRCVVWRGGDQSQLVHSLSFS*KDLEPW Trigger: CCAAGGCTCAAGGTCTTTCAAGGAAAAGGAGAGGGA...GTGCACGAGCTGAGACTGATCTCCTCCTCGCCATACCACGCATCTGAGCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 72 bp | TTGCTCTATCTGGTCCCAGGTATTCCTTCCTTAATGTaGTTTCTGCAGGGACAGTCCTCCTCTGGCGCCGTC | + |
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Preference number: 3 (lower is better) Translates to: LLYLVPGIPSLM*FLQGQSSSGAV Trigger: GACGGCGCCAGAGGAGGACTGTCCCTGCAGAAATCACATTAAGGAAGGAATACCTGGGACCAGATAGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | GTACCCTCTAATCACAGTGCTCTCTTTGGCACCTCATaGCACTGCCTAAAGACTCCCGGTGACATCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: VPSNHSALFGTS*HCLKTPGDISA Trigger: AGCAGAGATGTCACCGGGAGTCTTTAGGCAGTGGCATGAGGTGCCAAAGAGAGCACTGTGATTAGAGGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | AAGGTAGGAGCTGATGTAGAAGCCATGGAAGAGTGGTaGTTACTGGCTTGCTCCCCCATGGGTTTCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: KVGADVEAMEEW*LLACSPMGFSA Trigger: AGCTGAGAAACCCATGGGGGAGCAAGCCAGTAAGCACCACTCTTCCATGGCTTCTACATCAGCTCCTACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CCA 72 bp | GTGAAGGTAGGAGCTGATGTAGAAGCCATGGAAGAGTaGTGCTTACTGGCTTGCTCCCCCATGGGTTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: VKVGADVEAMEE*CLLACSPMGFS Trigger: TGAGAAACCCATGGGGGAGCAAGCCAGTAAGCACCACTCTTCCATGGCTTCTACATCAGCTCCTACCTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | TCTAATCACAGTGCTCTCTTTGGCACCTCATGCCACTaGCTAAAGACTCCCGGTGACATCTCTGCTCAGATG | + |
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Preference number: 3 (lower is better) Translates to: SNHSALFGTSCH*LKTPGDISAQM Trigger: CATCTGAGCAGAGATGTCACCGGGAGTCTTTAGGCAGTGGCATGAGGTGCCAAAGAGAGCACTGTGATTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CAA 90 bp | GACAGCATCTCCTGCGCTTCTAACATCATTGAACCATCTCTCTATCTGCCAATCATCACAGTGCTCTCTTaGGCACCTCATGCCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: DSISCASNIIEPSLYLPIITVLS*APHATA Trigger: GGCAGTGGCATGAGGTGCCAAAGAGAGCACTGTGAT...GATTGGCAGATAGAGAGATGGTTCAATGATGTTAGAAGCGCAGGAGATGCTGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 72 bp | AGAATGGGAACAGGGAAGAAACGTGAAGGTAGGAGCTaGTGTAGAAGCCATGGAAGAGTGGTGCTTACTGGC | + |
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Preference number: 3 (lower is better) Translates to: RMGTGKKREGRS*CRSHGRVVLTG Trigger: GCCAGTAAGCACCACTCTTCCATGGCTTCTACATCAGCTCCTACCTTCACGTTTCTTCCCTGTTCCCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | GATGTAGAAGCCATGGAAGAGTGGTGCTTACTGGCTTaGTCCCCCATGGGTTTCTCAGCTTGCTTTGCTATA | + |
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Preference number: 3 (lower is better) Translates to: DVEAMEEWCLLA*SPMGFSACFAI Trigger: TATAGCAAAGCAAGCTGAGAAACCCATGGGGGAGCAAGCCAGTAAGCACCACTCTTCCATGGCTTCTACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 72 bp | GACACTCCCAGGTCAAAGAGCTTAGGAAAGGCTATATaGGCACCAACTCCTACACAACTCAATCCCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: DTPRSKSLGKAI*APTPTQLNPSA Trigger: AGCAGAGGGATTGAGTTGTGTAGGAGTTGGTGCTCATATAGCCTTTCCTAAGCTCTTTGACCTGGGAGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 72 bp | GCAGAGACAGCCCTGCAGCTGTCCTGCATATTCAGATaGGTAAAATATTCAAGCCCCTGGAACTTGGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: AETALQLSCIFR*VKYSSPWNLVR Trigger: CCTAACCAAGTTCCAGGGGCTTGAATATTTTACTCATCTGAATATGCAGGACAGCTGCAGGGCTGTCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | CCTGCGCTTCTAACATCATTGAACCATCTCTCTATCTaGCAATCCAGTTTATCATCCCAGTCAGCTCGGTTC | + |
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Preference number: 3 (lower is better) Translates to: PALLTSLNHLSI*QSSLSSQSARF Trigger: GAACCGAGCTGACTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAATGATGTTAGAAGCGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR TCA 72 bp | CTGAGTGTAACTACTATATGGCAGAAAGCATGGCTTTaGTGGCAGGCGTGTAGACTCCATATCCCAAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LSVTTIWQKAWL*WQACRLHIPSF Trigger: AAAGCTTGGGATATGGAGTCTACACGCCTGCCATCAAAGCCATGCTTTCTGCCATATAGTAGTTACACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | CATTCTTTCCCAGATGGTTACAGCAAGTTAGATGCTTaGTTGGGACACTCCCAGGTCAAAGAGCTTAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: HSFPDGYSKLDA*LGHSQVKELRK Trigger: TTTCCTAAGCTCTTTGACCTGGGAGTGTCCCAAGCAAGCATCTAACTTGCTGTAACCATCTGGGAAAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CAA 90 bp | CAAAACACTAGAGCCAAAAGGCAAGTTCATGAAGAAAGGGCTTATTTGGCTTGCATCCTCCTTCCCACTTaGAAAGAGCAATCTTCGGCT | + |
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Preference number: 3 (lower is better) Translates to: QNTRAKRQVHEERAYLACILLPT*KEQSSA Trigger: AGCCGAAGATTGCTCTTTCAAAGTGGGAAGGAGGAT...GCAAGCCAAATAAGCCCTTTCTTCATGAACTTGCCTTTTGGCTCTAGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR GCA 72 bp | TCTTCGGCTTCTAGAGAACAACTAGACAGCATCTCCTaGGCTTCTAACATCATTGAACCATCTCTCTATCTG | + |
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Preference number: 3 (lower is better) Translates to: SSASREQLDSIS*ASNIIEPSLYL Trigger: CAGATAGAGAGATGGTTCAATGATGTTAGAAGCGCAGGAGATGCTGTCTAGTTGTTCTCTAGAAGCCGAAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR-3UTR CAA 90 bp | ATTATCAACCAATCCCATAGTTCAGAAGGTCATTTGAGCAGCAAGGCTTCTCTAGCGCTTCTAACATCATaGAACCATCTCTCTATCTGC | + |
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Preference number: 3 (lower is better) Translates to: IINQSHSSEGHLSSKASLALLTS*NHLSIC Trigger: GCAGATAGAGAGATGGTTCAATGATGTTAGAAGCGC...TAGAGAAGCCTTGCTGCTCAAATGACCTTCTGAACTATGGGATTGGTTGATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CCA 72 bp | GAGCCAAAAGGCAAGTTCATGAAGAAAGGGCTTATTTaGCTTGCACGTCTACATTATAGTTCATCACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: EPKGKFMKKGLI*LARLHYSSSLK Trigger: CTTCAGTGATGAACTATAATGTAGACGTGCAAGCCAAATAAGCCCTTTCTTCATGAACTTGCCTTTTGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR TCA 90 bp | CTAAAGACTCCCGGTGACATCTCTGCTCAGATGCGTGGTATGGCGAGGAGGAGAGCCACAGCAGGTTCTTaGGCGCCTTGCGGAACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LKTPGDISAQMRGMARRRATAGS*APCGTR Trigger: GCGAGTTCCGCAAGGCGCTCAAGAACCTGCTGTGGC...TCTCCTCCTCGCCATACCACGCATCTGAGCAGAGATGTCACCGGGAGTCTTTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR GCA 90 bp | CACAGTGCTCTTCCCCACATCCCTTTCCCAGGAATTTCTCCATTCTCACCCCTTTGGCCTCAGTGTCTGTaGTCTCTGCCCCGCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSALPHIPFPGISPFSPLWPQCL*SLPRRH Trigger: GTGGCGGCGGGGCAGAGAGCACAGACACTGAGGCCA...AAGGGGTGAGAATGGAGAAATTCCTGGGAAAGGGATGTGGGGAAGAGCACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR TCA 90 bp | GGCACCTCATGCCACTGCCTAAAGACTCCCGGTGACATCTCTGCTCAGATGCGTACACAGCACCTTGGCTaGAAAACAGCAGCTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSCHCLKTPGDISAQMRTQHLG*KTAALP Trigger: AGGGAGAGCTGCTGTTTTTCAGCCAAGGTGCTGTGT...ACGCATCTGAGCAGAGATGTCACCGGGAGTCTTTAGGCAGTGGCATGAGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR TCA 90 bp | AGAAATGGGGCTTGGGATAGAAGGCATGGAGTGGGAACTAGGAGGCAAGGCTGCGCGTACACTTGGCACTaGAAGTACTCCTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNGAWDRRHGVGTRRQGCAYTWH*KYSWLK Trigger: CTTCAGCCAGGAGTACTTTCAGTGCCAAGTGTACGC...GCAGCCTTGCCTCCTAGTTCCCACTCCATGCCTTCTATCCCAAGCCCCATTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR GCA 90 bp | TCTCTGCTCAGATGCGTGGTATGGCGAGGAGGAGATCAGTCTCAGCTCGTGCACTGCTGCTGCTCCTACTaGATCTGTTGTCCCAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLRCVVWRGGDQSQLVHCCCSY*ICCPNY Trigger: GTAGTTGGGACAACAGATGCAGTAGGAGCAGCAGCA...GTGCACGAGCTGAGACTGATCTCCTCCTCGCCATACCACGCATCTGAGCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR TCA 90 bp | CACAGTGCTCTTCCCCACATCCCTTTCCCAGGAATTTCTCCATTCTCACCCCTTTGCCGAAGGGCCACTTaGAGTCTAGTGCGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSALPHIPFPGISPFSPLCRRAT*SLVRSP Trigger: TGGAGAACGCACTAGACTTCAAGTGGCCCTTCGGCA...AAGGGGTGAGAATGGAGAAATTCCTGGGAAAGGGATGTGGGGAAGAGCACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR GCA 90 bp | GACAGCATCTCCTGCGCTTCTAACATCATTGAACCATCTCTCTATCTGCCAATCGCTGCAGCGACGCATTaGCGCTGGCGTTGGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: DSISCASNIIEPSLYLPIAAATH*RWRWPL Trigger: AAGTGGCCAACGCCAGCGGCAATGCGTCGCTGCAGC...GATTGGCAGATAGAGAGATGGTTCAATGATGTTAGAAGCGCAGGAGATGCTGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR GCA 90 bp | TGGTGCTTACTGGCTTGCTCCCCCATGGGTTTCTCAGCTTGCTTTGCTATAGAACCCAGCAGCACCTTCTaGAGGTGGTACAAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WCLLACSPMGFSACFAIEPSSTF*RWYKPS Trigger: GCTGGGTTTGTACCACCTGCAGAAGGTGCTGCTGGG...TTCTATAGCAAAGCAAGCTGAGAAACCCATGGGGGAGCAAGCCAGTAAGCACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CCA 90 bp | GGCACCTCATGCCACTGCCTAAAGACTCCCGGTGACATCTCTGCTCAGATGCGTTGGCGTACATGTTCATaGATGTCACCATGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: GTSCHCLKTPGDISAQMRWRTCS*MSPWTR Trigger: TCGTGTCCATGGTGACATCCATGAACATGTACGCCA...ACGCATCTGAGCAGAGATGTCACCGGGAGTCTTTAGGCAGTGGCATGAGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR TCA 90 bp | CAAAACACTAGAGCCAAAAGGCAAGTTCATGAAGAAAGGGCTTATTTGGCTTGCGGGTCCGATGGCTCTTaGGAGCCGAGGCCACCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNTRAKRQVHEERAYLACGSDGS*EPRPPS Trigger: ACTCGGTGGCCTCGGCTCTCAAGAGCCATCGGACCC...GCAAGCCAAATAAGCCCTTTCTTCATGAACTTGCCTTTTGGCTCTAGTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR GCA 90 bp | CTATCTGGTCCCAGGTATTCCTTCCTTAATGTGATTTCTGCAGGGACAGTCCTCCCCAGGCGCTGCTGCTaGTCCTACTGCATCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGPRYSFLNVISAGTVLPRRCC*SYCICC Trigger: ACAACAGATGCAGTAGGAGCAGCAGCAGCGCCTGGG...GAGGACTGTCCCTGCAGAAATCACATTAAGGAAGGAATACCTGGGACCAGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CCA 90 bp | TGCGCTTCTAACATCATTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCGCCCTCGGGTCCGATaGCTCTTGAGAGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CASNIIEPSLYLPIQFIIRPRVR*LLRAEA Trigger: GGCCTCGGCTCTCAAGAGCCATCGGACCCGAGGGCG...GATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAATGATGTTAGAAGCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR TCA 90 bp | CAAAACACTAGAGCCAAAAGGCAAGTTCATGAAGAAAGGGCTTATTTGGCTTGCGCGCCAGGCACACGCTaGCTGGGAACGCGTACACTT | + |
|
Preference number: 4 (lower is better) Translates to: QNTRAKRQVHEERAYLACAPGTR*LGTRTL Trigger: AAGTGTACGCGTTCCCAGTCAGCGTGTGCCTGGCGC...GCAAGCCAAATAAGCCCTTTCTTCATGAACTTGCCTTTTGGCTCTAGTGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CCA 90 bp | TGGTGCTTACTGGCTTGCTCCCCCATGGGTTTCTCAGCTTGCTTTGCTATAGAAACACGATCTTACACATaGCCTTGCCGAAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WCLLACSPMGFSACFAIETRSYT*PCRRAT Trigger: AGTGGCCCTTCGGCAAGGCCATGTGTAAGATCGTGT...TTCTATAGCAAAGCAAGCTGAGAAACCCATGGGGGAGCAAGCCAGTAAGCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CCA 90 bp | ACATCATTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCCAGTCAGCTCAGGTGGTAAGCGCCTaGTTGGGCAGCCAACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLNHLSICQSSLSSQSAQVVSA*LGSQHR Trigger: CCTGTGTTGGCTGCCCAACCAGGCGCTTACCACCTG...AGCTGACTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAATGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR GCA 90 bp | CACAGTGCTCTTCCCCACATCCCTTTCCCAGGAATTTCTCCATTCTCACCCCTTCTGAAAGTCAGTCAGTaGCAGGTTAGTGACAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSALPHIPFPGISPFSPLLKVSQ*QVSDKE Trigger: CTCTTTGTCACTAACCTGGCACTGACTGACTTTCAG...AAGGGGTGAGAATGGAGAAATTCCTGGGAAAGGGATGTGGGGAAGAGCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CCA 90 bp | CTATCTGGTCCCAGGTATTCCTTCCTTAATGTGATTTCTGCAGGGACAGTCCTCACCCACACAGCACCTTaGCTGAAAAACAGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGPRYSFLNVISAGTVLTHTAP*LKNSSS Trigger: AGAGCTGCTGTTTTTCAGCCAAGGTGCTGTGTGGGT...GAGGACTGTCCCTGCAGAAATCACATTAAGGAAGGAATACCTGGGACCAGATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CCA 90 bp | CAAAACACTAGAGCCAAAAGGCAAGTTCATGAAGAAAGGGCTTATTTGGCTTGCCAGGCACACGCTGACTaGGAACGCGTACACTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QNTRAKRQVHEERAYLACQAHAD*ERVHLA Trigger: TGCCAAGTGTACGCGTTCCCAGTCAGCGTGTGCCTG...GCAAGCCAAATAAGCCCTTTCTTCATGAACTTGCCTTTTGGCTCTAGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| 3UTR CAA 72 bp | TCTTTCCCAGATGGTTACAGCAAGTTAGATGCTTGCTaGGGACACTCCCAGGTCAAAGAGCTTAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPDGYSKLDAC*GHSQVKELRKG Trigger: GCCTTTCCTAAGCTCTTTGACCTGGGAGTGTCCCAAGCAAGCATCTAACTTGCTGTAACCATCTGGGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR TCA 90 bp | ACATCATTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCCAGTCAGCTTGTCTGGAAAGTGCATaGGGCAGAGCTCCTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLNHLSICQSSLSSQSACLESA*GRAPHP Trigger: TGGGTGAGGAGCTCTGCCTCATGCACTTTCCAGACA...AGCTGACTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAATGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR GCA 90 bp | TTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCCAGTCAGCTCGGTTCTGCGCCAGCCTTGCTTaGTCTTCATCAGGTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNHLSICQSSLSSQSARFCASLA*SSSGRE Trigger: TTCTCTACCTGATGAAGAGCAAGCAAGGCTGGCGCA...GAACCGAGCTGACTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGCACGTCTACATTATAGTTCATCACTGAAGGGAGCCAGAATGGGAACATCATGGATGTCACCATaGACACGATCTTACACATGG | + |
|
Preference number: 4 (lower is better) Translates to: WLARLHYSSSLKGARMGTSWMSP*TRSYTW Trigger: CCATGTGTAAGATCGTGTCCATGGTGACATCCATGA...TGTTCCCATTCTGGCTCCCTTCAGTGATGAACTATAATGTAGACGTGCAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR GCA 90 bp | CTTCTAACATCATTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCCAGAGCTTGTCTGGAAAGTaGATGAGGCAGAGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLTSLNHLSICQSSLSSQSLSGK*MRQSSS Trigger: TGAGGAGCTCTGCCTCATGCACTTTCCAGACAAGCT...CTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAATGATGTTAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| 3UTR CAA 72 bp | AGGGTAGTCTACTCAAGTTCTGACTCTCACCTTCTTTaGTTAGTTACAGGAGCAATACCTTTACTCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVVYSSSDSHLL*LVTGAIPLLIR Trigger: TCTTATGAGTAAAGGTATTGCTCCTGTAACTAACAAAAGAAGGTGAGAGTCAGAACTTGAGTAGACTACCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 90 bp | CCACACAGCACCTTGGCTGAAAAACAGCAGCTCTCCCTCAAGCTCTaGCCGCAGCAGTCGCCACGGCCACGCCCTCGGGTCCGATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHSTLAEKQQLSLKL*PQQSPRPRPRVRWL Trigger: GAGCCATCGGACCCGAGGGCGTGGCCGTGGCGACTGCTGCGGCCAGAGCTTGAGGGAGAGCTGCTGTTTTTCAGCCAAGGTGCTGTGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS GCA 90 bp | GGAGCGTCTCCTAGCGCTGGCTGTACTCAGGCCTCCCCCAGGCGCTaGTGCTGCTCCTACTGCATCTGTTGTCCCAACTACGCGACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GASPSAGCTQASPRR*CCSYCICCPNYATV Trigger: GACCGTCGCGTAGTTGGGACAACAGATGCAGTAGGAGCAGCAGCAGCGCCTGGGGGAGGCCTGAGTACAGCCAGCGCTAGGAGACGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS TCA 90 bp | TCAGGTTCGGCAGCAGCATTAAGCGGCGCCAGGGCCTGCAGCCCGTaGTCTTCAGGTTCTGGCTTGGTGGTGGCGGTGAAAGGGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SGSAAALSGARACSP*SSGSGLVVAVKGRM Trigger: CATGCGCCCTTTCACCGCCACCACCAAGCCAGAACCTGAAGATCACGGGCTGCAGGCCCTGGCGCCGCTTAATGCTGCTGCCGAACCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS GCA 90 bp | CTAGCCCCAGCTCCCACCACAGATCCTGAAGCTGCAGCGACGCATTaGCGCTGGCGTTGGCCACTTCCAGCAAGTCTGGGGTCAGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LAPAPTTDPEAAATH*RWRWPLPASLGSER Trigger: TCGCTCTGACCCCAGACTTGCTGGAAGTGGCCAACGCCAGCGGCAATGCGTCGCTGCAGCTTCAGGATCTGTGGTGGGAGCTGGGGCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS TCA 90 bp | GGCGTTGGCCACTTCCAGCAAGTCTGGGGTCAGAGCGAAGAATTCTaGGAGCTCATCACCCGCAGCTGCTTTCCTCACGGTGGCCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVGHFQQVWGQSEEF*ELITRSCFPHGGRG Trigger: CCCGCGGCCACCGTGAGGAAAGCAGCTGCGGGTGATGAGCTCTCAGAATTCTTCGCTCTGACCCCAGACTTGCTGGAAGTGGCCAACGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 90 bp | GCGAGGCCAGCGCAGCCGAAGCCCAGATCAACCCACACAGCACCTTaGCTGAAAAACAGCAGCTCTCCCTCAAGCTCTGGCCGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARPAQPKPRSTHTAP*LKNSSSPSSSGRSS Trigger: ACTGCTGCGGCCAGAGCTTGAGGGAGAGCTGCTGTTTTTCAGCCAAGGTGCTGTGTGGGTTGATCTGGGCTTCGGCTGCGCTGGCCTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 90 bp | AGCATTAAGCGGCGCCAGGGCCTGCAGCCCGTGATCTTCAGGTTCTaGCTTGGTGGTGGCGGTGAAAGGGCGCATGTTGGTGAGCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SIKRRQGLQPVIFRF*LGGGGERAHVGERR Trigger: CCTTCGCTCACCAACATGCGCCCTTTCACCGCCACCACCAAGCCAGAACCTGAAGATCACGGGCTGCAGGCCCTGGCGCCGCTTAATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 90 bp | AGGGAGCAGGTCGTAGCGACCCCCGCTGTAGACCACCACACCGGGTaGATAGTAGATCAGGTCAGGTTCGGCAGCAGCATTAAGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: REQVVATPAVDHHTG*IVDQVRFGSSIKRR Trigger: GCGCCGCTTAATGCTGCTGCCGAACCTGACCTGATCTACTATCCACCCGGTGTGGTGGTCTACAGCGGGGGTCGCTACGACCTGCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 90 bp | CCAGCTCCCACCACAGATCCTGAAGCTGCAGCGACGCATTGCCGCTaGCGTTGGCCACTTCCAGCAAGTCTGGGGTCAGAGCGAAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: PAPTTDPEAAATHCR*RWPLPASLGSERRI Trigger: AATTCTTCGCTCTGACCCCAGACTTGCTGGAAGTGGCCAACGCCAGCGGCAATGCGTCGCTGCAGCTTCAGGATCTGTGGTGGGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS TCA 90 bp | GAGTGCGCCAGGCACACGCTGACTGGGAACGCGTACACTTGGCACTaGAAGTACTCCTGGCTGAAGGGCACGGCGTTGAACTTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ECARHTLTGNAYTWH*KYSWLKGTALNLMR Trigger: CCTCATCAAGTTCAACGCCGTGCCCTTCAGCCAGGAGTACTTTCAGTGCCAAGTGTACGCGTTCCCAGTCAGCGTGTGCCTGGCGCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS GCA 90 bp | CCCAGCCAGAACTGCCTGTCCCAGCCCAGTAGCTTGTCTGGAAAGTaGATGAGGCAGAGCTCCTCACCCAACACCCTGATGGTGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSQNCLSQPSSLSGK*MRQSSSPNTLMVVE Trigger: TTCCACCACCATCAGGGTGTTGGGTGAGGAGCTCTGCCTCATGCACTTTCCAGACAAGCTACTGGGCTGGGACAGGCAGTTCTGGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 90 bp | CCCACCACAGATCCTGAAGCTGCAGCGACGCATTGCCGCTGGCGTTaGCCACTTCCAGCAAGTCTGGGGTCAGAGCGAAGAATTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PTTDPEAAATHCRWR*PLPASLGSERRILR Trigger: TCTCAGAATTCTTCGCTCTGACCCCAGACTTGCTGGAAGTGGCCAACGCCAGCGGCAATGCGTCGCTGCAGCTTCAGGATCTGTGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CAA 90 bp | TCTCTGCTCAGATGCGTGGTATGGCGAGGAGGAGATCAGTCTCAGCTCGTGCACACGATGGTCACCGACTaGGTGACCTTGGAGCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLRCVVWRGGDQSQLVHTMVTD*VTLERL Trigger: GAGACGCTCCAAGGTCACCAAGTCGGTGACCATCGT...GTGCACGAGCTGAGACTGATCTCCTCCTCGCCATACCACGCATCTGAGCAGAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CAA 90 bp | AGAAATGGGGCTTGGGATAGAAGGCATGGAGTGGGAACTAGGAGGCAAGGCTGCGTGGTAAGCGCCTGGTaGGGCAGCCAACACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RNGAWDRRHGVGTRRQGCVVSAW*GSQHRK Trigger: CTTCCTGTGTTGGCTGCCCAACCAGGCGCTTACCAC...GCAGCCTTGCCTCCTAGTTCCCACTCCATGCCTTCTATCCCAAGCCCCATTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CAA 90 bp | CTAAAGACTCCCGGTGACATCTCTGCTCAGATGCGTGGTATGGCGAGGAGGAGATCTTCAGGTTCTGGCTaGGTGGTGGCGGTGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKTPGDISAQMRGMARRRSSGSG*VVAVKG Trigger: CCCTTTCACCGCCACCACCAAGCCAGAACCTGAAGA...TCTCCTCCTCGCCATACCACGCATCTGAGCAGAGATGTCACCGGGAGTCTTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CAA 90 bp | CTATCTGGTCCCAGGTATTCCTTCCTTAATGTGATTTCTGCAGGGACAGTCCTCGGGTTGAGGCAGCTGTaGGAGTGCGCCAGGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: LSGPRYSFLNVISAGTVLGLRQL*ECARHT Trigger: CGTGTGCCTGGCGCACTCCAACAGCTGCCTCAACCC...GAGGACTGTCCCTGCAGAAATCACATTAAGGAAGGAATACCTGGGACCAGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CAA 90 bp | AGGATACCGGGGTTTAACTTCTCATTCTTTCCCAGATGGTTACAGCAAGTTAGACGGGTCCGATGGCTCTaGAGAGCCGAGGCCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RIPGFNFSFFPRWLQQVRRVRWL*RAEATE Trigger: CTCGGTGGCCTCGGCTCTCAAGAGCCATCGGACCCG...TCTAACTTGCTGTAACCATCTGGGAAAGAATGAGAAGTTAAACCCCGGTATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CAA 90 bp | TCCCCCATGGGTTTCTCAGCTTGCTTTGCTATAGAACCTAGGACCACTAGACAGTTGCCGAAGGGCCACTaGAAGTCTAGTGCGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPMGFSACFAIEPRTTRQLPKGH*KSSAFS Trigger: GGAGAACGCACTAGACTTCAAGTGGCCCTTCGGCAA...CTGTCTAGTGGTCCTAGGTTCTATAGCAAAGCAAGCTGAGAAACCCATGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CAA 90 bp | TCCCCCATGGGTTTCTCAGCTTGCTTTGCTATAGAACCTAGGACCACTAGACAGCTGAAGGGCACGGCGTaGAACTTGATGAGGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPMGFSACFAIEPRTTRQLKGTA*NLMRML Trigger: GAGCATCCTCATCAAGTTCAACGCCGTGCCCTTCAG...CTGTCTAGTGGTCCTAGGTTCTATAGCAAAGCAAGCTGAGAAACCCATGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CAA 90 bp | TGGTGCTTACTGGCTTGCTCCCCCATGGGTTTCTCAGCTTGCTTTGCTATAGAAAACCCACACAGCACCTaGGCTGAAAAACAGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WCLLACSPMGFSACFAIENPHST*AEKQQL Trigger: GAGCTGCTGTTTTTCAGCCAAGGTGCTGTGTGGGTT...TTCTATAGCAAAGCAAGCTGAGAAACCCATGGGGGAGCAAGCCAGTAAGCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGCACGTCTACATTATAGTTCATCACTGAAGGGAGCCAGAATGGGAACAGGCACGGCGTTGAACTaGATGAGGATGCTCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WLARLHYSSSLKGARMGTGTALN*MRMLQV Trigger: CACCTGGAGCATCCTCATCAAGTTCAACGCCGTGCC...TGTTCCCATTCTGGCTCCCTTCAGTGATGAACTATAATGTAGACGTGCAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CAA 90 bp | ACATCATTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCCAGTCAGCTAGGTTCTTGAGCGCCTaGCGGAACTCGCGGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TSLNHLSICQSSLSSQSARFLSA*RNSRRT Trigger: AGTGCGCCGCGAGTTCCGCAAGGCGCTCAAGAACCT...AGCTGACTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAATGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
||
| CDS-3UTR CAA 90 bp | CAAAACACTAGAGCCAAAAGGCAAGTTCATGAAGAAAGGGCTTATTTGGCTTGCCGCCACAGCAGGTTCTaGAGCGCCTTGCGGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: QNTRAKRQVHEERAYLACRHSRF*SALRNS Trigger: CGAGTTCCGCAAGGCGCTCAAGAACCTGCTGTGGCG...GCAAGCCAAATAAGCCCTTTCTTCATGAACTTGCCTTTTGGCTCTAGTGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CAA 90 bp | ATTATCAACCAATCCCATAGTTCAGAAGGTCATTTGAGCAGCAAGGCTTCTCTAACCGACTTGGTGACCTaGGAGCGTCTCCTAGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: IINQSHSSEGHLSSKASLTDLVT*ERLLAL Trigger: CAGCGCTAGGAGACGCTCCAAGGTCACCAAGTCGGT...TAGAGAAGCCTTGCTGCTCAAATGACCTTCTGAACTATGGGATTGGTTGATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CAA 90 bp | CAAAACACTAGAGCCAAAAGGCAAGTTCATGAAGAAAGGGCTTATTTGGCTTGCGGATTTGCGCCAGCCTaGCTTGCTCTTCATCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: QNTRAKRQVHEERAYLACGFAPA*LALHQV Trigger: TACCTGATGAAGAGCAAGCAAGGCTGGCGCAAATCC...GCAAGCCAAATAAGCCCTTTCTTCATGAACTTGCCTTTTGGCTCTAGTGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CAA 90 bp | ACATCATTGAACCATCTCTCTATCTGCCAATCCAGTTTATCATCCCAGTCAGCTATCTTACACATGGCCTaGCCGAAGGGCCACTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: TSLNHLSICQSSLSSQSAILHMA*PKGHLK Trigger: CTTCAAGTGGCCCTTCGGCAAGGCCATGTGTAAGAT...AGCTGACTGGGATGATAAACTGGATTGGCAGATAGAGAGATGGTTCAATGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS-3UTR CAA 90 bp | TGTAACAGTGCAATTTTGACAAAATTATCAACCAATCCCATAGTTCAGAAGGTCTTAGTGACAAAGAGGTaGATGGAGGATTTGCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: CNSAILTKLSTNPIVQKVLVTKR*MEDLRQ Trigger: CTGGCGCAAATCCTCCATCAACCTCTTTGTCACTAA...GACCTTCTGAACTATGGGATTGGTTGATAATTTTGTCAAAATTGCACTGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS TCA 72 bp | AGTCGCCACGGCCACGCCCTCGGGTCCGATGGCTCTTaGGAGCCGAGGCCACCGAGTGGTAGCGCGCCACGC | + |
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Preference number: 6 (lower is better) Translates to: SRHGHALGSDGS*EPRPPSGSAPR Trigger: GCGTGGCGCGCTACCACTCGGTGGCCTCGGCTCTCAAGAGCCATCGGACCCGAGGGCGTGGCCGTGGCGACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 72 bp | CGGCGCCAGGGCCTGCAGCCCGTGATCTTCAGGTTCTaGCTTGGTGGTGGCGGTGAAAGGGCGCATGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: RRQGLQPVIFRF*LGGGGERAHVG Trigger: ACCAACATGCGCCCTTTCACCGCCACCACCAAGCCAGAACCTGAAGATCACGGGCTGCAGGCCCTGGCGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS GCA 72 bp | GCTCCCACCACAGATCCTGAAGCTGCAGCGACGCATTaGCGCTGGCGTTGGCCACTTCCAGCAAGTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: APTTDPEAAATH*RWRWPLPASLG Trigger: CCCCAGACTTGCTGGAAGTGGCCAACGCCAGCGGCAATGCGTCGCTGCAGCTTCAGGATCTGTGGTGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 72 bp | GGTTCTGGCTTGGTGGTGGCGGTGAAAGGGCGCATGTaGGTGAGCGAAGGCGAGGCTATCCGCCACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSGLVVAVKGRM*VSEGEAIRHSR Trigger: CCTGCTGTGGCGGATAGCCTCGCCTTCGCTCACCAACATGCGCCCTTTCACCGCCACCACCAAGCCAGAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 90 bp | AGCGAGGCCAGCGCAGCCGAAGCCCAGATCAACCCACACAGCACCTaGGCTGAAAAACAGCAGCTCTCCCTCAAGCTCTGGCCGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SEASAAEAQINPHST*AEKQQLSLKLWPQQ Trigger: CTGCTGCGGCCAGAGCTTGAGGGAGAGCTGCTGTTTTTCAGCCAAGGTGCTGTGTGGGTTGATCTGGGCTTCGGCTGCGCTGGCCTCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 90 bp | CACAGGAAGAAGGAGAGGACGACGATGGTCACCGACTTGGTGACCTaGGAGCGTCTCCTAGCGCTGGCTGTACTCAGGCCTCCCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: HRKKERTTMVTDLVT*ERLLALAVLRPPPG Trigger: GCCTGGGGGAGGCCTGAGTACAGCCAGCGCTAGGAGACGCTCCAAGGTCACCAAGTCGGTGACCATCGTCGTCCTCTCCTTCTTCCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 72 bp | ACCACAGATCCTGAAGCTGCAGCGACGCATTGCCGCTaGCGTTGGCCACTTCCAGCAAGTCTGGGGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TTDPEAAATHCR*RWPLPASLGSE Trigger: CTCTGACCCCAGACTTGCTGGAAGTGGCCAACGCCAGCGGCAATGCGTCGCTGCAGCTTCAGGATCTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 72 bp | GCGCAGCCGAAGCCCAGATCAACCCACACAGCACCTTaGCTGAAAAACAGCAGCTCTCCCTCAAGCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: AQPKPRSTHTAP*LKNSSSPSSSG Trigger: GCCAGAGCTTGAGGGAGAGCTGCTGTTTTTCAGCCAAGGTGCTGTGTGGGTTGATCTGGGCTTCGGCTGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 72 bp | GTCGTAGCGACCCCCGCTGTAGACCACCACACCGGGTaGATAGTAGATCAGGTCAGGTTCGGCAGCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: VVATPAVDHHTG*IVDQVRFGSSI Trigger: AATGCTGCTGCCGAACCTGACCTGATCTACTATCCACCCGGTGTGGTGGTCTACAGCGGGGGTCGCTACGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 72 bp | AAGGAGAGGACGACGATGGTCACCGACTTGGTGACCTaGGAGCGTCTCCTAGCGCTGGCTGTACTCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: KERTTMVTDLVT*ERLLALAVLRP Trigger: AGGCCTGAGTACAGCCAGCGCTAGGAGACGCTCCAAGGTCACCAAGTCGGTGACCATCGTCGTCCTCTCCTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 90 bp | GCTGTTGGAGTGCGCCAGGCACACGCTGACTGGGAACGCGTACACTaGGCACTGAAAGTACTCCTGGCTGAAGGGCACGGCGTTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: AVGVRQAHADWERVH*ALKVLLAEGHGVEL Trigger: AAGTTCAACGCCGTGCCCTTCAGCCAGGAGTACTTTCAGTGCCAAGTGTACGCGTTCCCAGTCAGCGTGTGCCTGGCGCACTCCAACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 90 bp | AGGTGGTACAAACCCAGCCAGAACTGCCTGTCCCAGCCCAGTAGCTaGTCTGGAAAGTGCATGAGGCAGAGCTCCTCACCCAACACCCTG | + |
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Preference number: 6 (lower is better) Translates to: RWYKPSQNCLSQPSS*SGKCMRQSSSPNTL Trigger: CAGGGTGTTGGGTGAGGAGCTCTGCCTCATGCACTTTCCAGACAAGCTACTGGGCTGGGACAGGCAGTTCTGGCTGGGTTTGTACCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS TCA 72 bp | AGGCACACGCTGACTGGGAACGCGTACACTTGGCACTaGAAGTACTCCTGGCTGAAGGGCACGGCGTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: RHTLTGNAYTWH*KYSWLKGTALN Trigger: GTTCAACGCCGTGCCCTTCAGCCAGGAGTACTTTCAGTGCCAAGTGTACGCGTTCCCAGTCAGCGTGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 72 bp | CACAGGAAGAAGGAGAGGACGACGATGGTCACCGACTaGGTGACCTTGGAGCGTCTCCTAGCGCTGGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: HRKKERTTMVTD*VTLERLLALAV Trigger: TACAGCCAGCGCTAGGAGACGCTCCAAGGTCACCAAGTCGGTGACCATCGTCGTCCTCTCCTTCTTCCTGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS GCA 72 bp | AACTGCCTGTCCCAGCCCAGTAGCTTGTCTGGAAAGTaGATGAGGCAGAGCTCCTCACCCAACACCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: NCLSQPSSLSGK*MRQSSSPNTLM Trigger: CATCAGGGTGTTGGGTGAGGAGCTCTGCCTCATGCACTTTCCAGACAAGCTACTGGGCTGGGACAGGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 72 bp | TTGAACTTGATGAGGATGCTCCAGGTGGTAAGCGCCTaGTTGGGCAGCCAACACAGGAAGAAGGAGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: LNLMRMLQVVSA*LGSQHRKKERT Trigger: CGTCCTCTCCTTCTTCCTGTGTTGGCTGCCCAACCAGGCGCTTACCACCTGGAGCATCCTCATCAAGTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 90 bp | TGCCAGGTTAGTGACAAAGAGGTTGATGGAGGATTTGCGCCAGCCTaGCTTGCTCTTCATCAGGTAGAGAACCAGCAGGTTGCCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: CQVSDKEVDGGFAPA*LALHQVENQQVAGQ Trigger: CTGGCCGGCAACCTGCTGGTTCTCTACCTGATGAAGAGCAAGCAAGGCTGGCGCAAATCCTCCATCAACCTCTTTGTCACTAACCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CCA 72 bp | AGAAGACGCTGGCGTACATGTTCATGGATGTCACCATaGACACGATCTTACACATGGCCTTGCCGAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRRWRTCSWMSP*TRSYTWPCRRA Trigger: GGCCCTTCGGCAAGGCCATGTGTAAGATCGTGTCCATGGTGACATCCATGAACATGTACGCCAGCGTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 72 bp | ATGGATGTCACCATGGACACGATCTTACACATGGCCTaGCCGAAGGGCCACTTGAAGTCTAGTGCGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: MDVTMDTILHMA*PKGHLKSSAFS Trigger: GGAGAACGCACTAGACTTCAAGTGGCCCTTCGGCAAGGCCATGTGTAAGATCGTGTCCATGGTGACATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 90 bp | TACATGTTCATGGATGTCACCATGGACACGATCTTACACATGGCCTaGCCGAAGGGCCACTTGAAGTCTAGTGCGTTCTCCACAGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: YMFMDVTMDTILHMA*PKGHLKSSAFSTAQ Trigger: TTGGGCTGTGGAGAACGCACTAGACTTCAAGTGGCCCTTCGGCAAGGCCATGTGTAAGATCGTGTCCATGGTGACATCCATGAACATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS CAA 72 bp | AGTGACAAAGAGGTTGATGGAGGATTTGCGCCAGCCTaGCTTGCTCTTCATCAGGTAGAGAACCAGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SDKEVDGGFAPA*LALHQVENQQV Trigger: AACCTGCTGGTTCTCTACCTGATGAAGAGCAAGCAAGGCTGGCGCAAATCCTCCATCAACCTCTTTGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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| CDS GCA 72 bp | AAAGGGCAGAGTGAGCACGAACTGAAAGTCAGTCAGTaGCAGGTTAGTGACAAAGAGGTTGATGGAGGATTT | + |
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Preference number: 6 (lower is better) Translates to: KGQSEHELKVSQ*QVSDKEVDGGF Trigger: AAATCCTCCATCAACCTCTTTGTCACTAACCTGGCACTGACTGACTTTCAGTTCGTGCTCACTCTGCCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058007.7 |
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