Pregenerated sensors for RXFP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034009Ensembl transcript IDs: ENSMUST00000078527.13, ENSMUST00000182491.7
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTTGCTGGGCTGTGGAGCAGGCCTTCCTGAATCCTCCCACCCCTaGCAAACCTTGAGCATTGCGGAGGCCCTAATCCTGAGTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: LLLGCGAGLPESSHP*QTLSIAEALILSLS Trigger: AGACAGACTCAGGATTAGGGCCTCCGCAATGCTCAAGGTTTGGCAGGGGTGGGAGGATTCAGGAAGGCCTGCTCCACAGCCCAGCAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR TCA 90 bp | ATACGGTTGCCTTCAAAGTCCAGCCAGTGCAGGCGGGGCATGTGCTaGCAGAGGGGTTTGTCAGGCAAACGGGTGAGGGCATTATTCATC | + |
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Preference number: 1 (lower is better) Translates to: IRLPSKSSQCRRGMC*QRGLSGKRVRALFI Trigger: GATGAATAATGCCCTCACCCGTTTGCCTGACAAACCCCTCTGTCAGCACATGCCCCGCCTGCACTGGCTGGACTTTGAAGGCAACCGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR GCA 90 bp | GGGTCTGTGAAAGCGCCTGGCTTCATGAACCCAGAGGACATCTCCTaGAAGGGCCACATTTCCACCCAGATGAATGATGGAGCATATGCC | + |
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Preference number: 1 (lower is better) Translates to: GSVKAPGFMNPEDIS*KGHISTQMNDGAYA Trigger: GGCATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCCTTGCAGGAGATGTCCTCTGGGTTCATGAAGCCAGGCGCTTTCACAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR TCA 90 bp | TTAGTGAGGCTGCGCAGTCCTCTGAAGGCAGAGACGCTCACGGAGTaGATCCTATTGTTTTGCAGGCACAGCTTCTGCAGCTCATGGTAC | + |
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Preference number: 1 (lower is better) Translates to: LVRLRSPLKAETLTE*ILLFCRHSFCSSWY Trigger: GTACCATGAGCTGCAGAAGCTGTGCCTGCAAAACAATAGGATTCACTCCGTGAGCGTCTCTGCCTTCAGAGGACTGCGCAGCCTCACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR GCA 90 bp | ACTACCTCCAATATTGTCTCAAAGGGTCTCTCTGTCTTTCCTCTCTaGCTCCATTTGCTGGGGGTTCTGCAGCTCCTCTGGACCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: TTSNIVSKGLSVFPL*LHLLGVLQLLWTQA Trigger: AGCCTGGGTCCAGAGGAGCTGCAGAACCCCCAGCAAATGGAGGCAGAGAGGAAAGACAGAGAGACCCTTTGAGACAATATTGGAGGTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR GCA 90 bp | CAACGACCCCATGAACTGACAATGAACACTCTCCATCCACGGCTGTaGGTGCTTATTGTACTCTCCCCGAAACTTGAGGTCAAAGGCACC | + |
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Preference number: 1 (lower is better) Translates to: QRPHELTMNTLHPRL*VLIVLSPKLEVKGT Trigger: GGTGCCTTTGACCTCAAGTTTCGGGGAGAGTACAATAAGCACGCACAGCCGTGGATGGAGAGTGTTCATTGTCAGTTCATGGGGTCGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR TCA 90 bp | CCCAGAGGACATCTCCTGCAAGGGCCACATTTCCACCCAGATGAATaGTGGAGCATATGCCTTCTGAGTCTCTTTCCTGTCAACAGACCT | + |
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Preference number: 1 (lower is better) Translates to: PRGHLLQGPHFHPDE*WSICLLSLFPVNRP Trigger: AGGTCTGTTGACAGGAAAGAGACTCAGAAGGCATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCCTTGCAGGAGATGTCCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR TCA 90 bp | TCTCCATCCACGGCTGTGCGTGCTTATTGTACTCTCCCCGAAACTTaGGGTCAAAGGCACCAATCACAAATAGATACACCCCCATTAGGC | + |
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Preference number: 1 (lower is better) Translates to: SPSTAVRAYCTLPET*GQRHQSQIDTPPLG Trigger: GCCTAATGGGGGTGTATCTATTTGTGATTGGTGCCTTTGACCTCAAGTTTCGGGGAGAGTACAATAAGCACGCACAGCCGTGGATGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CCA 90 bp | GTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTaGGTTCCAGATACTGAGCTCAGGTCACCATGCTTGTGTAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: VRGQFSRVSSPSTLP*VPDTELRSPCLCSN Trigger: ATTACTACACAAGCATGGTGACCTGAGCTCAGTATCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| 3UTR CCA 90 bp | ACCTGCAAAATTGGTGCTGATTTGAGTTTCATTCTTCACCTCATGTaGATGGTTTACCTGCTGGCCATGATGCTGCCCAGGTCTCCATCA | + |
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Preference number: 1 (lower is better) Translates to: TCKIGADLSFILHLM*MVYLLAMMLPRSPS Trigger: TGATGGAGACCTGGGCAGCATCATGGCCAGCAGGTAAACCATCCACATGAGGTGAAGAATGAAACTCAAATCAGCACCAATTTTGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR GCA 90 bp | CTGCGAGATACCCTAGCAAGAGCTGGGACCCAGGAAGGCTTGCAATaGAGGATTTCTTACCAAGAAAAATTACCACTGAATAAATCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LRDTLARAGTQEGLQ*RISYQEKLPLNKSG Trigger: CCCAGATTTATTCAGTGGTAATTTTTCTTGGTAAGAAATCCTGCATTGCAAGCCTTCCTGGGTCCCAGCTCTTGCTAGGGTATCTCGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR TCA 90 bp | GCCAGTGAGAATCAAATAGGCAATCTTTACTCTCCTTCCTGTCTTTaGTTCCAGTTCCCTAGTCTCATCCCTAGCCTAGTAGCAGACCAT | + |
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Preference number: 1 (lower is better) Translates to: ASENQIGNLYSPSCL*FQFPSLIPSLVADH Trigger: ATGGTCTGCTACTAGGCTAGGGATGAGACTAGGGAACTGGAATCAAAGACAGGAAGGAGAGTAAAGATTGCCTATTTGATTCTCACTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR GCA 90 bp | CCCATTAGGCAGTCAGCACAGCAGAGAGAAATGATCGACATGGCATaGAGCTTGTTCTCAGATCTGATGTATGGTCGCATACAAATAACA | + |
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Preference number: 1 (lower is better) Translates to: PIRQSAQQREMIDMA*SLFSDLMYGRIQIT Trigger: TGTTATTTGTATGCGACCATACATCAGATCTGAGAACAAGCTGCATGCCATGTCGATCATTTCTCTCTGCTGTGCTGACTGCCTAATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CCA 90 bp | CCTGTTCTGTTTCCTCATGATAACACTAACTTAGAGCGAAGCCACTaGAGAACTCAGTATGGAGTGACAGAACAAATGCTGGTTCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: PVLFPHDNTNLERSH*RTQYGVTEQMLVLG Trigger: ACCCAGAACCAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAGTGGCTTCGCTCTAAGTTAGTGTTATCATGAGGAAACAGAACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR TCA 90 bp | GAGGCACTGCATAGAAACAGGAACATAGGCACAGGACAAAGTGTTTaGGGAACCAGACGTATTAAACATGCGAGCCTATTTCTTCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: EALHRNRNIGTGQSV*GTRRIKHASLFLQR Trigger: CCTTTGAAGAAATAGGCTCGCATGTTTAATACGTCTGGTTCCTCAAACACTTTGTCCTGTGCCTATGTTCCTGTTTCTATGCAGTGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR TCA 90 bp | AGCACAAAACAGGAAATCTGGGACATCATGAAAAGACCAAATCAATaGCTGGTAGGAATAGAGGAAGGAGAAGAAACCCAGGCCAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: STKQEIWDIMKRPNQ*LVGIEEGEETQAKD Trigger: GTCTTTGGCCTGGGTTTCTTCTCCTTCCTCTATTCCTACCAGTCATTGATTTGGTCTTTTCATGATGTCCCAGATTTCCTGTTTTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR GCA 90 bp | AAAATAAACTCCAAGGTCAGGTTCTGGAAATTTAGGGCCAGCACCTaGAAAATTGGTGCTGATTTGAGTTTCATTCTTCACCTCATGTGG | + |
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Preference number: 1 (lower is better) Translates to: KINSKVRFWKFRAST*KIGADLSFILHLMW Trigger: CCACATGAGGTGAAGAATGAAACTCAAATCAGCACCAATTTTGCAGGTGCTGGCCCTAAATTTCCAGAACCTGACCTTGGAGTTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR CCA 90 bp | ACGGTGCTTAAATGTGTAAGAAAAATAAACTCCAAGGTCAGGTTCTaGAAATTTAGGGCCAGCACCTGCAAAATTGGTGCTGATTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: TVLKCVRKINSKVRF*KFRASTCKIGADLS Trigger: ACTCAAATCAGCACCAATTTTGCAGGTGCTGGCCCTAAATTTCCAGAACCTGACCTTGGAGTTTATTTTTCTTACACATTTAAGCACCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR TCA 90 bp | TATCTCTGGGTTATGTTAACACTGAGTACTTTGGGTGTATGCCCATaGGTTGACTGGCTAGGTCACATGGTGTATAGATTATATTTTGAG | + |
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Preference number: 1 (lower is better) Translates to: YLWVMLTLSTLGVCP*VDWLGHMVYRLYFE Trigger: CTCAAAATATAATCTATACACCATGTGACCTAGCCAGTCAACTCATGGGCATACACCCAAAGTACTCAGTGTTAACATAACCCAGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR GCA 90 bp | CTATGTTGTGTGCTCAGCACTTTACTTCCATGCAGTGTGCATAAATaGATGCTAGAAATAGATTTCCCTTCATCAGCTATGCAAATATGT | + |
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Preference number: 1 (lower is better) Translates to: LCCVLSTLLPCSVHK*MLEIDFPSSAMQIC Trigger: ACATATTTGCATAGCTGATGAAGGGAAATCTATTTCTAGCATGCATTTATGCACACTGCATGGAAGTAAAGTGCTGAGCACACAACATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| 3UTR CAA 90 bp | GGCTGTGGAGCAGGCCTTCCTGAATCCTCCCACCCCTGCCAAACCTaGAGCATTGCGGAGGCCCTAATCCTGAGTCTGTCTCTCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GCGAGLPESSHPCQT*SIAEALILSLSLSE Trigger: CTCACTGAGAGACAGACTCAGGATTAGGGCCTCCGCAATGCTCAAGGTTTGGCAGGGGTGGGAGGATTCAGGAAGGCCTGCTCCACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTGGGTTCCAGACCCTCTACCCTTCCGTaGGTTCCAGATACTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: QRTVFQSLFSLYPSVGSRPSTLP*VPDTEL Trigger: GAGCTCAGTATCTGGAACCCACGGAAGGGTAGAGGG...TCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTGGGTTCCAGACTACAGGTCTGTCCATaGCATCTGGCAACAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: QRTVFQSLFSLYPSVGSRLQVCP*HLATKP Trigger: AGGCTTTGTTGCCAGATGTCATGGACAGACCTGTAG...TCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR-3UTR TCA 90 bp | GACAGATCACAGGGGTCTGTGAAAGCGCCTGGCTTCATGAACCCAGAGGACATCCAAAGACTCTCTGGATaGTGCTTGCCAAGAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: DRSQGSVKAPGFMNPEDIQRLSG*CLPRGS Trigger: AGAACCTCTTGGCAAGCATCATCCAGAGAGTCTTTG...GATGTCCTCTGGGTTCATGAAGCCAGGCGCTTTCACAGACCCCTGTGATCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CAA 90 bp | CTCTCCATCCACGGCTGTGCGTGCTTATTGTACTCTCCCCGAAACTaGAGGTCAAAGGCACCAATCACAAATAGATACACCCCCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: LSIHGCACLLYSPRN*RSKAPITNRYTPIR Trigger: CCTAATGGGGGTGTATCTATTTGTGATTGGTGCCTTTGACCTCAAGTTTCGGGGAGAGTACAATAAGCACGCACAGCCGTGGATGGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR TCA 90 bp | GACAGATCACAGGGGTCTGTGAAAGCGCCTGGCTTCATGAACCCAGAGGACATCGAATACCAAATAGACTaGGCCAGAAAAGAAATTCCC | + |
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Preference number: 2 (lower is better) Translates to: DRSQGSVKAPGFMNPEDIEYQID*ARKEIP Trigger: GGGAATTTCTTTTCTGGCTCAGTCTATTTGGTATTC...GATGTCCTCTGGGTTCATGAAGCCAGGCGCTTTCACAGACCCCTGTGATCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR GCA 90 bp | ATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCAGGCTCTATGTTGTGTaGTCAGCACTTTACTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: MPWCASGGQRTVFQSLFSRLYVV*SALYFH Trigger: ATGGAAGTAAAGTGCTGAGCACACAACATAGAGCCT...GGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCATTCTTGAGACTCCGGTGGCCACACCATaGAGGGGAATCAAAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: IPSYRQIPLEALHSILETPVATP*RGIKST Trigger: AGTGCTTTTGATTCCCCTGCATGGTGTGGCCACCGG...AGTCTCAAGAATGCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CAA 90 bp | GGAATCCAGCACAGCGCGTCGGTGAAAACGATAAAGAAAAAGCGTTaGGCGAGAACCACCTCCTTCTTCACTTGCTTCTGTATTTCGGTT | + |
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Preference number: 2 (lower is better) Translates to: GIQHSASVKTIKKKR*ARTTSFFTCFCISV Trigger: AACCGAAATACAGAAGCAAGTGAAGAAGGAGGTGGTTCTCGCCAAACGCTTTTTCTTTATCGTTTTCACCGACGCGCTGTGCTGGATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR TCA 90 bp | AGCATATGCCTTCTGAGTCTCTTTCCTGTCAACAGACCTTCTTTGTCTGTAGTTGAGGGCAACAGAAACTaGGGAGTGGAACACTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SICLLSLFPVNRPSLSVVEGNRN*GVEHSA Trigger: GGCTGAGTGTTCCACTCCTCAGTTTCTGTTGCCCTC...AACTACAGACAAAGAAGGTCTGTTGACAGGAAAGAGACTCAGAAGGCATATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR GCA 90 bp | ATCCAGAGAGGGCAACAGAAACTGAGGAGTGGAACACTCAGCCAACAAGGACAAATGATCGACATGGCATaGAGCTTGTTCTCAGATCTG | + |
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Preference number: 2 (lower is better) Translates to: IQRGQQKLRSGTLSQQGQMIDMA*SLFSDL Trigger: CAGATCTGAGAACAAGCTGCATGCCATGTCGATCAT...TTGTCCTTGTTGGCTGAGTGTTCCACTCCTCAGTTTCTGTTGCCCTCTCTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CAA 90 bp | GATCAGGGCTGTGTTGGGTTTGTAGAGTGTGTTTGCTCGTGTTCCTaGGATTTTCATCTGAGGAACAGTGTGAGTAGCACTAGTGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: DQGCVGFVECVCSCS*DFHLRNSVSSTSVS Trigger: GCTAACACTAGTGCTACTCACACTGTTCCTCAGATGAAAATCCAAGGAACACGAGCAAACACACTCTACAAACCCAACACAGCCCTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR CAA 90 bp | AGGTTCTGGAAATTTAGGGCCAGCACCTGCAAAATTGGTGCTGATTaGAGTTTCATTCTTCACCTCATGTGGATGGTTTACCTGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RFWKFRASTCKIGAD*SFILHLMWMVYLLA Trigger: GGCCAGCAGGTAAACCATCCACATGAGGTGAAGAATGAAACTCAAATCAGCACCAATTTTGCAGGTGCTGGCCCTAAATTTCCAGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTATGGGCATGAGTAATACATGTGTGTGGCAGTCAGAGGCTGGCAGTAGGATAAATATGCTGTGTTaGCTCTCAAGTGTGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: VCMGMSNTCVWQSEAGSRINMLC*LSSVVT Trigger: AGTCACCACACTTGAGAGTCAACACAGCATATTTAT...CCTACTGCCAGCCTCTGACTGCCACACACATGTATTACTCATGCCCATACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTCTGGCCTCAAACTTGTaGCCCTTCTGCTTTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VSTSSALGLKVCSTIAGFLASNL*PFCFFL Trigger: GAGGAAAAAGCAGAAGGGTCACAAGTTTGAGGCCAG...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR-3UTR TCA 90 bp | AAGCCACTGGAGAACTCAGTATGGAGTGACAGAACAAATGCTGGTTCTGGGTTTGTGTGTGTATGGGCATaGGTAATACATGTGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: KPLENSVWSDRTNAGSGFVCVWA*VIHVCG Trigger: GCCACACACATGTATTACTCATGCCCATACACACAC...AAACCCAGAACCAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAGTGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR-3UTR GCA 90 bp | CGACATGGCATGCAGCTTGTTCTCAGATCTGATGTATGGTCGCATACAAATAACGCTGCGCACATGTGGTaGGTATCCACAGTACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: RHGMQLVLRSDVWSHTNNAAHMW*VSTVLK Trigger: TTTCAGTACTGTGGATACGCACCACATGTGCGCAGC...GTTATTTGTATGCGACCATACATCAGATCTGAGAACAAGCTGCATGCCATGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR GCA 90 bp | GTGTATCAGATCTCCTTCCTGGCCTCCATTTCCAATTATACAGTCTCATCTCTATGTTGGGCTTACAGCTaGGCACATGTGGTGCGTATC | + |
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Preference number: 2 (lower is better) Translates to: VYQISFLASISNYTVSSLCWAYS*AHVVRI Trigger: GATACGCACCACATGTGCGCAGCTGTAAGCCCAACA...TAGAGATGAGACTGTATAATTGGAAATGGAGGCCAGGAAGGAGATCTGATACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAATGAGTTTCATACTGCGAGATACCCTAGCAAGAGCTGGGACCCAGGAAGGTCCGTAAAATGTGAGTaGGGAAATTCGACTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: INEFHTARYPSKSWDPGRSVKCE*GNSTEV Trigger: CACCTCAGTCGAATTTCCCCACTCACATTTTACGGA...CCTTCCTGGGTCCCAGCTCTTGCTAGGGTATCTCGCAGTATGAAACTCATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGAGAGGGCAACAGAAACTGAGGAGTGGAACACTCAGCCAACAAGGACAAGAAATTCGACTGAGGTaGTTGTCTTCAATTATCAGC | + |
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Preference number: 2 (lower is better) Translates to: IQRGQQKLRSGTLSQQGQEIRLR*LSSIIS Trigger: GCTGATAATTGAAGACAATCACCTCAGTCGAATTTC...TTGTCCTTGTTGGCTGAGTGTTCCACTCCTCAGTTTCTGTTGCCCTCTCTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCATTCTTGAGACTCCCGTGTCTTCTGAATaGAGAGGAAAGCATACTCCA | + |
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Preference number: 2 (lower is better) Translates to: IPSYRQIPLEALHSILETPVSSE*RGKHTP Trigger: TGGAGTATGCTTTCCTCTTCATTCAGAAGACACGGG...AGTCTCAAGAATGCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR TCA 90 bp | GATCCAGAGAGGGCAACAGAAACTGAGGAGTGGAACACTCAGCCAACAAGGACAAACCACATTTATCTATaGAATCCTCTGGAGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: DPERATETEEWNTQPTRTNHIYL*NPLEKS Trigger: TGACTTCTCCAGAGGATTTCATAGATAAATGTGGTT...TGTCCTTGTTGGCTGAGTGTTCCACTCCTCAGTTTCTGTTGCCCTCTCTGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTGGGTTCCAGATGCAGTGTGCATAAATaGATGCTAGAAATAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: QRTVFQSLFSLYPSVGSRCSVHK*MLEIDF Trigger: GAAATCTATTTCTAGCATGCATTTATGCACACTGCA...TCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| 3UTR-3UTR CCA 90 bp | CATCATGAAAAGACCAAATCAATGACTGGTAGGAATAGAGGAAGGAGAAGAAACCCCTCTACCCTTCCGTaGGTTCCAGATACTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: HHEKTKSMTGRNRGRRRNPSTLP*VPDTEL Trigger: GAGCTCAGTATCTGGAACCCACGGAAGGGTAGAGGG...GTTTCTTCTCCTTCCTCTATTCCTACCAGTCATTGATTTGGTCTTTTCATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CAA 90 bp | TGGAGCATATGCCTTCTGAGTCTCTTTCCTGTCAACAGACCTTCTTaGTCTGTAGTTGTGCCAGAGTTGATGGATCATTTCCTTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: WSICLLSLFPVNRPS*SVVVPELMDHFLER Trigger: CCTTTCAAGGAAATGATCCATCAACTCTGGCACAACTACAGACAAAGAAGGTCTGTTGACAGGAAAGAGACTCAGAAGGCATATGCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGAGAGGGCAACAGAAACTGAGGAGTGGAACACTCAGCCAACAAGGACAAAAGGTTATTCTGTTATaGCTGAGGTACAGTTTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: IQRGQQKLRSGTLSQQGQKVILL*LRYSLV Trigger: CACTAAACTGTACCTCAGTCATAACAGAATAACCTT...TTGTCCTTGTTGGCTGAGTGTTCCACTCCTCAGTTTCTGTTGCCCTCTCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCATTCTTGAGACTACTTCCCGTGTCTTCTaGATGAAGAGGAAAGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: IPSYRQIPLEALHSILETTSRVF*MKRKAY Trigger: GTATGCTTTCCTCTTCATTCAGAAGACACGGGAAGT...AGTCTCAAGAATGCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR TCA 90 bp | AAATACAGTCCTCCTGCCTCAGATTATAAATGTGTATCAGATCTCCTTCCTGGCTCTCTCAGTGGAGACTaGCAGTCAGAAGAGGCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: KYSPPASDYKCVSDLLPGSLSGD*QSEEAK Trigger: TTTAGCCTCTTCTGACTGTCAGTCTCCACTGAGAGA...GCCAGGAAGGAGATCTGATACACATTTATAATCTGAGGCAGGAGGACTGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTATGGGCATGAGTAATACATGTGTGTGGCAGTCAGAGGCTGGCAGTAGGTGCAGTGTGCATAAATaGATGCTAGAAATAGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: VCMGMSNTCVWQSEAGSRCSVHK*MLEIDF Trigger: GAAATCTATTTCTAGCATGCATTTATGCACACTGCA...CCTACTGCCAGCCTCTGACTGCCACACACATGTATTACTCATGCCCATACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTGAATTCAGACTCAGTTaGTTGTGTGCGAGCAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: VSTSSALGLKVCSTIAGFEFRLS*LCASNK Trigger: CTTGTTGCTCGCACACAACCAACTGAGTCTGAATTC...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 90 bp | AGGCAGTCAGCACAGCAGAGAGAAATGATCGACATGGCATGCAGCTaGTTCTCAGATCTGATGTATGGTCGCATACAAATAACAAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: RQSAQQREMIDMACS*FSDLMYGRIQITKM Trigger: CATTTTTGTTATTTGTATGCGACCATACATCAGATCTGAGAACAAGCTGCATGCCATGTCGATCATTTCTCTCTGCTGTGCTGACTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CAA 90 bp | TTCATACTGCGAGATACCCTAGCAAGAGCTGGGACCCAGGAAGGCTaGCAATGCAGGATTTCTTACCAAGAAAAATTACCACTGAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: FILRDTLARAGTQEG*QCRISYQEKLPLNK Trigger: TTTATTCAGTGGTAATTTTTCTTGGTAAGAAATCCTGCATTGCAAGCCTTCCTGGGTCCCAGCTCTTGCTAGGGTATCTCGCAGTATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CAA 90 bp | TCCATTTCCAATTATACAGTCTCATCTCTAGCACTACCTCCAATATaGTCTCAAAGGGTCTCTCTGTCTTTCCTCTCTGCCTCCATTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SISNYTVSSLALPPI*SQRVSLSFLSASIC Trigger: GCAAATGGAGGCAGAGAGGAAAGACAGAGAGACCCTTTGAGACAATATTGGAGGTAGTGCTAGAGATGAGACTGTATAATTGGAAATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CAA 90 bp | CTCTTTCCTGTCAACAGACCTTCTTTGTCTGTAGTTGTGCCAGAGTaGATGGATCATTTCCTTGAAAGGTCTAGTGGTCAACGTGTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LFPVNRPSLSVVVPE*MDHFLERSSGQRVD Trigger: ATCTACACGTTGACCACTAGACCTTTCAAGGAAATGATCCATCAACTCTGGCACAACTACAGACAAAGAAGGTCTGTTGACAGGAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR GCA 90 bp | GGTGAAAACGATAAAGAAAAAGCGTTTGGCGAGAACCACCTCCTTCTTCACTTGAATTATGGATACGGTTaGCTTCAAAGTCCAGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GENDKEKAFGENHLLLHLNYGYG*LQSPAS Trigger: ACTGGCTGGACTTTGAAGGCAACCGTATCCATAATT...CAAGTGAAGAAGGAGGTGGTTCTCGCCAAACGCTTTTTCTTTATCGTTTTCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CAA 90 bp | AACGATAAAGAAAAAGCGTTTGGCGAGAACCACCTCCTTCTTCACTaGCTTCTGTATTTCGGTTACTGTTACGGAGCTTTGATGAACACT | + |
|
Preference number: 2 (lower is better) Translates to: NDKEKAFGENHLLLH*LLYFGYCYGALMNT Trigger: AGTGTTCATCAAAGCTCCGTAACAGTAACCGAAATACAGAAGCAAGTGAAGAAGGAGGTGGTTCTCGCCAAACGCTTTTTCTTTATCGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR TCA 90 bp | AAATACAGTCCTCCTGCCTCAGATTATAAATGTGTATCAGATCTCCTTCCTGGCGTGGGGAAATTCGACTaGGGTGATTGTCTTCAATTA | + |
|
Preference number: 2 (lower is better) Translates to: KYSPPASDYKCVSDLLPGVGKFD*GDCLQL Trigger: TAATTGAAGACAATCACCTCAGTCGAATTTCCCCAC...GCCAGGAAGGAGATCTGATACACATTTATAATCTGAGGCAGGAGGACTGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTTATTGCCAAGTGGAGCAAAAGCCACTATAAACCCAATAATCCAAATGAACACAGCAGAGAGAAATaGTCGACATGGCATGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLIAKWSKSHYKPNNPNEHSREK*STWHAA Trigger: AGCTGCATGCCATGTCGATCATTTCTCTCTGCTGTG...TTCATTTGGATTATTGGGTTTATAGTGGCTTTTGCTCCACTTGGCAATAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR GCA 90 bp | GTGTATCAGATCTCCTTCCTGGCCTCCATTTCCAATTATACAGTCTCATCTCTAAGGCTCTATGTTGTGTaGTCAGCACTTTACTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: VYQISFLASISNYTVSSLRLYVV*SALYFH Trigger: ATGGAAGTAAAGTGCTGAGCACACAACATAGAGCCT...TAGAGATGAGACTGTATAATTGGAAATGGAGGCCAGGAAGGAGATCTGATACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCACTGGAGAACTCAGTATGGAGTGACAGAACAAATGCTGGTTCTGGGTTTATGTTCTACCATAGCTaGCTTTTTAATGGTCGTACT | + |
|
Preference number: 2 (lower is better) Translates to: KPLENSVWSDRTNAGSGFMFYHS*LFNGRT Trigger: AGTACGACCATTAAAAAGCCAGCTATGGTAGAACAT...AAACCCAGAACCAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAGTGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 90 bp | CTCTCAGTGAGTAGAACCCAACTTACAAAGGAGGCTCAAAGTCCTTaGTATCCTCCATCAGTAATCGATCATTATTACAAATCCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LSVSRTQLTKEAQSP*YPPSVIDHYYKSFL Trigger: GAGGAAGGATTTGTAATAATGATCGATTACTGATGGAGGATACAAAGGACTTTGAGCCTCCTTTGTAAGTTGGGTTCTACTCACTGAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 90 bp | TCCATGACATCTGGCAACAAAGCCTCCTTTAATAAATATGCTGTGTaGACTCTCAAGTGTGGTGACTCAATGAAGAATGCAAAGGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: SMTSGNKASFNKYAV*TLKCGDSMKNAKDS Trigger: TGAATCCTTTGCATTCTTCATTGAGTCACCACACTTGAGAGTCAACACAGCATATTTATTAAAGGAGGCTTTGTTGCCAGATGTCATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR-3UTR TCA 90 bp | AGCATATGCCTTCTGAGTCTCTTTCCTGTCAACAGACCTTCTTTGTCTGTAGTTAAATCTGGGACATCATaGAAAGACCAAATCAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: SICLLSLFPVNRPSLSVVKSGTS*KDQIND Trigger: GTCATTGATTTGGTCTTTTCATGATGTCCCAGATTT...AACTACAGACAAAGAAGGTCTGTTGACAGGAAAGAGACTCAGAAGGCATATGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CAA 90 bp | CAGCAAAATTATAGTTATGAAGTAGCAATGAAAGTAATTCTATGGTaGGGGTCACCACACATGAGGAAATGTATTAAGGGTCACAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: QQNYSYEVAMKVILW*GSPHMRKCIKGHSI Trigger: AATGCTGTGACCCTTAATACATTTCCTCATGTGTGGTGACCCCAACCATAGAATTACTTTCATTGCTACTTCATAACTATAATTTTGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR CCA 90 bp | CATCATGAAAAGACCAAATCAATGACTGGTAGGAATAGAGGAAGGAGAAGAAACCTCAGATCTGATGTATaGTCGCATACAAATAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: HHEKTKSMTGRNRGRRRNLRSDV*SHTNNK Trigger: TTTGTTATTTGTATGCGACCATACATCAGATCTGAG...GTTTCTTCTCCTTCCTCTATTCCTACCAGTCATTGATTTGGTCTTTTCATGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR GCA 72 bp | GGCTGTGGAGCAGGCCTTCCTGAATCCTCCCACCCCTaGCAAACCTTGAGCATTGCGGAGGCCCTAATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GCGAGLPESSHP*QTLSIAEALIL Trigger: CAGGATTAGGGCCTCCGCAATGCTCAAGGTTTGGCAGGGGTGGGAGGATTCAGGAAGGCCTGCTCCACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR TCA 72 bp | CTGCGCAGTCCTCTGAAGGCAGAGACGCTCACGGAGTaGATCCTATTGTTTTGCAGGCACAGCTTCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LRSPLKAETLTE*ILLFCRHSFCS Trigger: GCTGCAGAAGCTGTGCCTGCAAAACAATAGGATTCACTCCGTGAGCGTCTCTGCCTTCAGAGGACTGCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR CAA 90 bp | GACAGATCACAGGGGTCTGTGAAAGCGCCTGGCTTCATGAACCCAGAGGACATCCTCACCCCATCTCTTTaGTGTCAGCCACCAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: DRSQGSVKAPGFMNPEDILTPSL*CQPPIP Trigger: GGGTATTGGTGGCTGACACAAAAGAGATGGGGTGAG...GATGTCCTCTGGGTTCATGAAGCCAGGCGCTTTCACAGACCCCTGTGATCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CCA 72 bp | CATGTTAGCTCCCAAAACCTAGAAACACATTCAGCCTaGGACTCCCGGTGGCCACACCATGCAGGGGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: HVSSQNLETHSA*DSRWPHHAGES Trigger: TGATTCCCCTGCATGGTGTGGCCACCGGGAGTCCCAGGCTGAATGTGTTTCTAGGTTTTGGGAGCTAACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR GCA 72 bp | AAAGCGCCTGGCTTCATGAACCCAGAGGACATCTCCTaGAAGGGCCACATTTCCACCCAGATGAATGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: KAPGFMNPEDIS*KGHISTQMNDG Trigger: TCCATCATTCATCTGGGTGGAAATGTGGCCCTTGCAGGAGATGTCCTCTGGGTTCATGAAGCCAGGCGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CCA 72 bp | CAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTaGGTTCCAGATACTGAGCTCAGGTCACCATGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QFSRVSSPSTLP*VPDTELRSPCL Trigger: CAAGCATGGTGACCTGAGCTCAGTATCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| 3UTR CCA 72 bp | CCAAGAGGTTCTCTAGAGATGAAATCCCATCCGTGTTaGGCTTACAGCTGCGCACATGTGGTGCGTATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PRGSLEMKSHPC*AYSCAHVVRIH Trigger: GTGGATACGCACCACATGTGCGCAGCTGTAAGCCCAACACGGATGGGATTTCATCTCTAGAGAACCTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR CAA 90 bp | TCACAGGGGTCTGTGAAAGCGCCTGGCTTCATGAACCCAGAGGACATCTCCTGCGACATGGCATGCAGCTaGTTCTCAGATCTGATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQGSVKAPGFMNPEDISCDMACS*FSDLMY Trigger: ATACATCAGATCTGAGAACAAGCTGCATGCCATGTC...GCAGGAGATGTCCTCTGGGTTCATGAAGCCAGGCGCTTTCACAGACCCCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR-3UTR CAA 90 bp | GATCCAGAGAGGGCAACAGAAACTGAGGAGTGGAACACTCAGCCAACAAGGACAGGGACCCAGGAAGGCTaGCAATGCAGGATTTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: DPERATETEEWNTQPTRTGTQEG*QCRISY Trigger: GTAAGAAATCCTGCATTGCAAGCCTTCCTGGGTCCC...TGTCCTTGTTGGCTGAGTGTTCCACTCCTCAGTTTCTGTTGCCCTCTCTGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR GCA 72 bp | CTTCCGTGGGTTCCAGATACTGAGCTCAGGTCACCATaGTTGTGTAGTAATCACCTTTCTCCACCGAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: LPWVPDTELRSP*LCSNHLSPPSI Trigger: GATGCTCGGTGGAGAAAGGTGATTACTACACAAGCATGGTGACCTGAGCTCAGTATCTGGAACCCACGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| 3UTR GCA 72 bp | AATATTGTCTCAAAGGGTCTCTCTGTCTTTCCTCTCTaGCTCCATTTGCTGGGGGTTCTGCAGCTCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NIVSKGLSVFPL*LHLLGVLQLLW Trigger: CCAGAGGAGCTGCAGAACCCCCAGCAAATGGAGGCAGAGAGGAAAGACAGAGAGACCCTTTGAGACAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTATGGGCATGAGTAATACATGTGTGTaGCAGTCAGAGGCTGGCAGTAGGTGTCTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VCVCMGMSNTCV*QSEAGSRCLPQ Trigger: CTGAGGAAGACACCTACTGCCAGCCTCTGACTGCCACACACATGTATTACTCATGCCCATACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR TCA 72 bp | CATCTCCTGCAAGGGCCACATTTCCACCCAGATGAATaGTGGAGCATATGCCTTCTGAGTCTCTTTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HLLQGPHFHPDE*WSICLLSLFPV Trigger: GACAGGAAAGAGACTCAGAAGGCATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCCTTGCAGGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR TCA 72 bp | AGGACATCTCCTGCAAGGGCCACATTTCCACCCAGATaGATGATGGAGCATATGCCTTCTGAGTCTCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTSPARATFPPR*MMEHMPSESLS Trigger: GGAAAGAGACTCAGAAGGCATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCCTTGCAGGAGATGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR GCA 72 bp | TTAAAATTGCGTGTGTGTGTGTGTGATGTGCATGTGTaGACACACATGCCATGGTGCGCAAGTGGAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LKLRVCVCDVHV*THMPWCASGGQ Trigger: CTGACCTCCACTTGCGCACCATGGCATGTGTGTGCACACATGCACATCACACACACACACACGCAATTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
||
| 3UTR GCA 72 bp | CATGAACTGACAATGAACACTCTCCATCCACGGCTGTaGGTGCTTATTGTACTCTCCCCGAAACTTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HELTMNTLHPRL*VLIVLSPKLEV Trigger: GACCTCAAGTTTCGGGGAGAGTACAATAAGCACGCACAGCCGTGGATGGAGAGTGTTCATTGTCAGTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR TCA 72 bp | CTTTTCCAAGTGAGAGCCAGGATTTTTCGATGTGGCTaGGGCTGGCCTCAAACTTGTGACCCTTCTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFQVRARIFRCG*GWPQTCDPSAF Trigger: AAAAGCAGAAGGGTCACAAGTTTGAGGCCAGCCTCAGCCACATCGAAAAATCCTGGCTCTCACTTGGAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR TCA 72 bp | ACGGCTGTGCGTGCTTATTGTACTCTCCCCGAAACTTaGGGTCAAAGGCACCAATCACAAATAGATACACCC | + |
|
Preference number: 3 (lower is better) Translates to: TAVRAYCTLPET*GQRHQSQIDTP Trigger: GGGTGTATCTATTTGTGATTGGTGCCTTTGACCTCAAGTTTCGGGGAGAGTACAATAAGCACGCACAGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR GCA 72 bp | CTAGAGATGAAATCCCATCCGTGTTGGGCTTACAGCTaGGCACATGTGGTGCGTATCCACAGTACTGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: LEMKSHPCWAYS*AHVVRIHSTEI Trigger: AATTTCAGTACTGTGGATACGCACCACATGTGCGCAGCTGTAAGCCCAACACGGATGGGATTTCATCTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CCA 72 bp | ATTGGTGCTGATTTGAGTTTCATTCTTCACCTCATGTaGATGGTTTACCTGCTGGCCATGATGCTGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IGADLSFILHLM*MVYLLAMMLPR Trigger: CCTGGGCAGCATCATGGCCAGCAGGTAAACCATCCACATGAGGTGAAGAATGAAACTCAAATCAGCACCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTGGGTTCCAGACAACCACATTTAAAATaGCGTGTGTGTGTGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QRTVFQSLFSLYPSVGSRQPHLK*RVCVCD Trigger: ATCACACACACACACACGCAATTTTAAATGTGGTTG...TCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
||
| 3UTR TCA 72 bp | ACATGCGAGCCTATTTCTTCAAAGGAAGAAAATAACTaGCACCGGTTGCCTAGGAAGCTGGGATGGGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TCEPISSKEENN*HRLPRKLGWVL Trigger: CAACACCCATCCCAGCTTCCTAGGCAACCGGTGTCAGTTATTTTCTTCCTTTGAAGAAATAGGCTCGCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR GCA 72 bp | CAGAACAAATGCTGGTTCTGGGTTTATAACAAAGCTTaGCTCCCTCCTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QNKCWFWVYNKA*LPPVCVCVCVC Trigger: ACACACACACACACACACACACACAGGAGGGAGGCAAGCTTTGTTATAAACCCAGAACCAGCATTTGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR GCA 72 bp | CTATTTCTTCAAAGGAAGAAAATAACTGACACCGGTTaGCTAGGAAGCTGGGATGGGTGTTGTCCGACAACC | + |
|
Preference number: 3 (lower is better) Translates to: LFLQRKKITDTG*LGSWDGCCPTT Trigger: GGTTGTCGGACAACACCCATCCCAGCTTCCTAGGCAACCGGTGTCAGTTATTTTCTTCCTTTGAAGAAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR GCA 72 bp | CAGTCAGCACAGCAGAGAGAAATGATCGACATGGCATaGAGCTTGTTCTCAGATCTGATGTATGGTCGCATA | + |
|
Preference number: 3 (lower is better) Translates to: QSAQQREMIDMA*SLFSDLMYGRI Trigger: TATGCGACCATACATCAGATCTGAGAACAAGCTGCATGCCATGTCGATCATTTCTCTCTGCTGTGCTGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CCA 72 bp | AATGAGTTTCATACTGCGAGATACCCTAGCAAGAGCTaGGACCCAGGAAGGCTTGCAATGCAGGATTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: NEFHTARYPSKS*DPGRLAMQDFL Trigger: TAAGAAATCCTGCATTGCAAGCCTTCCTGGGTCCCAGCTCTTGCTAGGGTATCTCGCAGTATGAAACTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CCA 72 bp | CTTCTTCCCTTCCTGTTCTTCTTTGATTCCACTCTCTaGAAACTCAAACAACCCTCACAGCAGACCCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLPFLFFFDSTL*KLKQPSQQTQL Trigger: AAGCTGGGTCTGCTGTGAGGGTTGTTTGAGTTTCCAGAGAGTGGAATCAAAGAAGAACAGGAAGGGAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAGAGAGGGCAACAGAAACTGAGGAGTGGAACACTCAGCCAACAAGGACAACAACCACATTTAAAATaGCGTGTGTGTGTGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IQRGQQKLRSGTLSQQGQQPHLK*RVCVCD Trigger: ATCACACACACACACACGCAATTTTAAATGTGGTTG...TTGTCCTTGTTGGCTGAGTGTTCCACTCCTCAGTTTCTGTTGCCCTCTCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTGGAATTCAGACTCAGTaGGTTGTGTGCGAGCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: VSTSSALGLKVCSTIAGFGIQTQ*VVCEQQ Trigger: TTGTTGCTCGCACACAACCAACTGAGTCTGAATTCC...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR GCA 72 bp | CCCATCCGTGTTGGGCTTACAGCTGCGCACATGTGGTaGGTATCCACAGTACTGAAATTTCTTAAAATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PIRVGLTAAHMW*VSTVLKFLKID Trigger: ATCTATTTTAAGAAATTTCAGTACTGTGGATACGCACCACATGTGCGCAGCTGTAAGCCCAACACGGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR GCA 72 bp | ACCCTAGCAAGAGCTGGGACCCAGGAAGGCTTGCAATaGAGGATTTCTTACCAAGAAAAATTACCACTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TLARAGTQEGLQ*RISYQEKLPLN Trigger: ATTCAGTGGTAATTTTTCTTGGTAAGAAATCCTGCATTGCAAGCCTTCCTGGGTCCCAGCTCTTGCTAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTTTAATGGTCGTACTAGGACTACCTGTCCCTACCTaGGGCCACTCTAAGCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: LGLKVCSTIAGFLMVVLGLPVPT*GHSKLT Trigger: AGTTAGCTTAGAGTGGCCCAAGGTAGGGACAGGTAG...TCCTAGTACGACCATTAAAAAGCCAGCTATGGTAGAACATACTTTTAATCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAAATCTGGGACATCATGAAAAGACCAAATCAATGACTGGTAGGAATAGACTACCTGTCCCTACCTaGGGCCACTCTAAGCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: TGNLGHHEKTKSMTGRNRLPVPT*GHSKLT Trigger: AGTTAGCTTAGAGTGGCCCAAGGTAGGGACAGGTAG...TCTATTCCTACCAGTCATTGATTTGGTCTTTTCATGATGTCCCAGATTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCATTCTTGAGACTTTTTTCCCTAAGGTTTaGATCAGGGCTGTGTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IPSYRQIPLEALHSILETFFPKV*IRAVLG Trigger: ACCCAACACAGCCCTGATCAAAACCTTAGGGAAAAA...AGTCTCAAGAATGCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCATTCTTGAGACTAAATTATGGATACGGTaGCCTTCAAAGTCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: IPSYRQIPLEALHSILETKLWIR*PSKSSQ Trigger: CTGGCTGGACTTTGAAGGCAACCGTATCCATAATTT...AGTCTCAAGAATGCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR TCA 72 bp | ATTTCCACCCAGATGAATGATGGAGCATATGCCTTCTaGGTCTCTTTCCTGTCAACAGACCTTCTTTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ISTQMNDGAYAF*VSFLSTDLLCL Trigger: CAGACAAAGAAGGTCTGTTGACAGGAAAGAGACTCAGAAGGCATATGCTCCATCATTCATCTGGGTGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR GCA 72 bp | TTTGATCAGGGCTGTGTTGGGTTTGTAGAGTGTGTTTaGTCGTGTTCCTTGGATTTTCATCTGAGGAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: FDQGCVGFVECV*SCSLDFHLRNS Trigger: ACTGTTCCTCAGATGAAAATCCAAGGAACACGAGCAAACACACTCTACAAACCCAACACAGCCCTGATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CCA 72 bp | AATCCCATCCGTGTTGGGCTTACAGCTGCGCACATGTaGTGCGTATCCACAGTACTGAAATTTCTTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: NPIRVGLTAAHM*CVSTVLKFLKI Trigger: TATTTTAAGAAATTTCAGTACTGTGGATACGCACCACATGTGCGCAGCTGTAAGCCCAACACGGATGGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCATATGCCTTCTGAGTCTCTTTCCTGTCAACAGACCTTCTTTGTCTGTAGTTCCTTCCTGTTCTTCTTaGATTCCACTCTCTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SICLLSLFPVNRPSLSVVPSCSS*IPLSGN Trigger: GTTTCCAGAGAGTGGAATCAAAGAAGAACAGGAAGG...AACTACAGACAAAGAAGGTCTGTTGACAGGAAAGAGACTCAGAAGGCATATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CCA 72 bp | TTTCCTCATGATAACACTAACTTAGAGCGAAGCCACTaGAGAACTCAGTATGGAGTGACAGAACAAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FPHDNTNLERSH*RTQYGVTEQML Trigger: CAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAGTGGCTTCGCTCTAAGTTAGTGTTATCATGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR-3UTR CAA 90 bp | CATCATGAAAAGACCAAATCAATGACTGGTAGGAATAGAGGAAGGAGAAGAAACGTGAATCCTATTGTTTaGCAGGCACAGCTTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HHEKTKSMTGRNRGRRRNVNPIV*QAQLLQ Trigger: CTGCAGAAGCTGTGCCTGCAAAACAATAGGATTCAC...GTTTCTTCTCCTTCCTCTATTCCTACCAGTCATTGATTTGGTCTTTTCATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR TCA 72 bp | TGCAATGCAGGATTTCTTACCAAGAAAAATTACCACTaGATAAATCTGGGCTCCAGTACTTCCCGTGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CNAGFLTKKNYH*INLGSSTSRVF Trigger: GAAGACACGGGAAGTACTGGAGCCCAGATTTATTCAGTGGTAATTTTTCTTGGTAAGAAATCCTGCATTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGAACTCAGTATGGAGTGACAGAACAAATGCTGGTTCTGGGTTTATAACAAATAAATATGCTGTGTaGACTCTCAAGTGTGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LENSVWSDRTNAGSGFITNKYAV*TLKCGD Trigger: GTCACCACACTTGAGAGTCAACACAGCATATTTATT...TGTTATAAACCCAGAACCAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CCA 72 bp | CTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTaGCTTTTTAATGGTCGTACTAGGAATTCAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSTGIKSMFYHS*LFNGRTRNSDS Trigger: TGAGTCTGAATTCCTAGTACGACCATTAAAAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CCA 72 bp | AAATGTGTAAGAAAAATAAACTCCAAGGTCAGGTTCTaGAAATTTAGGGCCAGCACCTGCAAAATTGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KCVRKINSKVRF*KFRASTCKIGA Trigger: AGCACCAATTTTGCAGGTGCTGGCCCTAAATTTCCAGAACCTGACCTTGGAGTTTATTTTTCTTACACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CCA 72 bp | ACTTCTATAGGGACTTTCATCGTGATAACTGTCACATaGAAACCTTCCCCTAAAGTTTTACGGTGCTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSIGTFIVITVT*KPSPKVLRCLN Trigger: ATTTAAGCACCGTAAAACTTTAGGGGAAGGTTTCCATGTGACAGTTATCACGATGAAAGTCCCTATAGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CCA 72 bp | TTCCTTGAAAGGTCTAGTGGTCAACGTGTAGATAATTaGGTTCAAAGCACTGTTGATAGGCAGAATAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLERSSGQRVDN*VQSTVDRQNKN Trigger: ATTTTTATTCTGCCTATCAACAGTGCTTTGAACCCAATTATCTACACGTTGACCACTAGACCTTTCAAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR TCA 90 bp | CGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCAAGCGCCTGGCTTCATaGACCCAGAGGACATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKWRSEDSFPESLLPLPFKRLAS*TQRTSP Trigger: AGGAGATGTCCTCTGGGTTCATGAAGCCAGGCGCTT...GAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | GACAGATCACAGGGGTCTGTGAAAGCGCCTGGCTTCATGAACCCAGAGGACATCAGTCGTCCACACCATTaGAGTGAAGCAGCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRSQGSVKAPGFMNPEDISRPHH*SEAAEA Trigger: TGCCTCAGCTGCTTCACTGCAATGGTGTGGACGACT...GATGTCCTCTGGGTTCATGAAGCCAGGCGCTTTCACAGACCCCTGTGATCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR TCA 90 bp | GCACACACATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCCACAGCAGAGAGAAATaGTCGACATGGCATGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHTCHGAQVEVRGQFSRVHSREK*STWHAA Trigger: AGCTGCATGCCATGTCGATCATTTCTCTCTGCTGTG...GACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCATGTGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | ATAAATGAGTTTCATACTGCGAGATACCCTAGCAAGAGCTGGGACCCAGGAAGGGCTGAGGCAGGCACCTaGTCATGTTCCCACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: INEFHTARYPSKSWDPGRAEAGT*SCSHRG Trigger: TCCCCTGTGGGAACATGAGCAGGTGCCTGCCTCAGC...CCTTCCTGGGTCCCAGCTCTTGCTAGGGTATCTCGCAGTATGAAACTCATTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR GCA 90 bp | ATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCCATCCACGGCTGTaGGTGCTTATTGTACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPWCASGGQRTVFQSLFSLHPRL*VLIVLS Trigger: GGAGAGTACAATAAGCACGCACAGCCGTGGATGGAG...GGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | CCGTGGGTTCCAGATACTGAGCTCAGGTCACCATGCTaGTGTAGTAATCACCTTTCTCCACCGAGCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PWVPDTELRSPC*CSNHLSPPSIS Trigger: CGAGATGCTCGGTGGAGAAAGGTGATTACTACACAAGCATGGTGACCTGAGCTCAGTATCTGGAACCCACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
||
| 3UTR CAA 72 bp | GCCAAGAGGTTCTCTAGAGATGAAATCCCATCCGTGTaGGGCTTACAGCTGCGCACATGTGGTGCGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKRFSRDEIPSV*GLQLRTCGAYP Trigger: TGGATACGCACCACATGTGCGCAGCTGTAAGCCCAACACGGATGGGATTTCATCTCTAGAGAACCTCTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR GCA 90 bp | ATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCATTCTTGAGACTGCTGAGGCAGGCACCTaGTCATGTTCCCACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPSYRQIPLEALHSILETAEAGT*SCSHRG Trigger: TCCCCTGTGGGAACATGAGCAGGTGCCTGCCTCAGC...AGTCTCAAGAATGCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
||
| CDS-3UTR CCA 90 bp | CGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCAGACAAAGACTCTCTaGATGATGCTTGCCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKWRSEDSFPESLLPLPFQTKTL*MMLAKR Trigger: CCTCTTGGCAAGCATCATCCAGAGAGTCTTTGTCTG...GAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | GAAGGCAGAGACGCTCACGGAGTGAATCCTATTGTTTaGCAGGCACAGCTTCTGCAGCTCATGGTACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGRDAHGVNPIV*QAQLLQLMVLP Trigger: AGGAAGTACCATGAGCTGCAGAAGCTGTGCCTGCAAAACAATAGGATTCACTCCGTGAGCGTCTCTGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR TCA 90 bp | GGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCGCTTGTTCTCAGATCTaGTGTATGGTCGCATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAQVEVRGQFSRVSSPSTACSQI*CMVAYK Trigger: TTTGTATGCGACCATACATCAGATCTGAGAACAAGC...GGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR TCA 90 bp | GTGTGTATGGGCATGAGTAATACATGTGTGTGGCAGTCAGAGGCTGGCAGTAGGTTCCACCCAGATGAATaGTGGAGCATATGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCMGMSNTCVWQSEAGSRFHPDE*WSICLL Trigger: CAGAAGGCATATGCTCCATCATTCATCTGGGTGGAA...CCTACTGCCAGCCTCTGACTGCCACACACATGTATTACTCATGCCCATACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | ATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCTCCGTAAAATGTGAGTaGGGAAATTCGACTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MPWCASGGQRTVFQSLFSSVKCE*GNSTEV Trigger: CACCTCAGTCGAATTTCCCCACTCACATTTTACGGA...GGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | AGATGTCGGCATATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCGTCTGTGAAAGCGCCTaGCTTCATGAACCCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCRHIPSYRQIPLEALHSVCESA*LHEPRG Trigger: TCCTCTGGGTTCATGAAGCCAGGCGCTTTCACAGAC...GCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGATATGCCGACATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR TCA 90 bp | GGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCGAAATTCGACTGAGGTaGTTGTCTTCAATTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAQVEVRGQFSRVSSPSTEIRLR*LSSIIS Trigger: GCTGATAATTGAAGACAATCACCTCAGTCGAATTTC...GGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | CAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTGGGTTCCAGACTTATGAAGTTCCTCTaGAGGGACATTACAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QRTVFQSLFSLYPSVGSRLMKFL*RDITVT Trigger: TGTGACTGTAATGTCCCTGCAGAGGAACTTCATAAG...TCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | AGATGTCGGCATATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCGCTGCGCACATGTGGTaGGTATCCACAGTACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCRHIPSYRQIPLEALHSAAHMW*VSTVLK Trigger: TTTCAGTACTGTGGATACGCACCACATGTGCGCAGC...GCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGATATGCCGACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTGGGTTCCAGAAGCCATTCCAGTCTGTaGAGATCTTCAAAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRTVFQSLFSLYPSVGSRSHSSL*RSSKTP Trigger: AGGAGTTTTTGAAGATCTCCACAGACTGGAATGGCT...TCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | AGATGTCGGCATATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCAAATCCCATCCGTGTTaGGCTTACAGCTGCGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RCRHIPSYRQIPLEALHSKSHPC*AYSCAH Trigger: ATGTGCGCAGCTGTAAGCCCAACACGGATGGGATTT...GCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGATATGCCGACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | TTCTCTCTGTATGAACACCAGCTACCTGTCCCTACCTaGGGCCACTCTAAGCTAACTTGTCTTAGATGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLYEHQLPVPT*GHSKLTCLRCR Trigger: CCGACATCTAAGACAAGTTAGCTTAGAGTGGCCCAAGGTAGGGACAGGTAGCTGGTGTTCATACAGAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
||
| 3UTR CAA 72 bp | CACGGCTGTGCGTGCTTATTGTACTCTCCCCGAAACTaGAGGTCAAAGGCACCAATCACAAATAGATACACC | + |
|
Preference number: 4 (lower is better) Translates to: HGCACLLYSPRN*RSKAPITNRYT Trigger: GGTGTATCTATTTGTGATTGGTGCCTTTGACCTCAAGTTTCGGGGAGAGTACAATAAGCACGCACAGCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR TCA 90 bp | CGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCTCTGGTATTTCCACCTaGAGCAGTGAAAGAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKWRSEDSFPESLLPLPFSGIST*SSERNF Trigger: GAAATTTCTTTCACTGCTTCAGGTGGAAATACCAGA...GAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTAGTCGTCCACACCATTaGAGTGAAGCAGCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTSSALGLKVCSTIAGFSRPHH*SEAAEA Trigger: TGCCTCAGCTGCTTCACTGCAATGGTGTGGACGACT...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | GTGTGTATGGGCATGAGTAATACATGTGTGTGGCAGTCAGAGGCTGGCAGTAGGAATTATGGATACGGTTaGCTTCAAAGTCCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCMGMSNTCVWQSEAGSRNYGYG*LQSPAS Trigger: ACTGGCTGGACTTTGAAGGCAACCGTATCCATAATT...CCTACTGCCAGCCTCTGACTGCCACACACATGTATTACTCATGCCCATACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTTGTTGGGCTTACAGCTaGGCACATGTGGTGCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSSALGLKVCSTIAGFCWAYS*AHVVRI Trigger: GATACGCACCACATGTGCGCAGCTGTAAGCCCAACA...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | ATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCATTCTTGAGACTGGCACAAACAATGCATaGGCACAGAGCCAACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPSYRQIPLEALHSILETGTNNA*AQSQPS Trigger: GCTTGGTTGGCTCTGTGCCCATGCATTGTTTGTGCC...AGTCTCAAGAATGCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR TCA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTTGTCAGGCAAACGGGTaGGGGCATTATTCATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTSSALGLKVCSTIAGFCQANG*GHYSSA Trigger: TGCTGATGAATAATGCCCTCACCCGTTTGCCTGACA...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAACTCAGTATGGAGTGACAGAACAAATGCTGGTTCTGGGTTTATAACATCTCGGCACAAACAATaGATGGGCACAGAGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LENSVWSDRTNAGSGFITSRHKQ*MGTEPT Trigger: GGTTGGCTCTGTGCCCATGCATTGTTTGTGCCGAGA...TGTTATAAACCCAGAACCAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | GTGTGTATGGGCATGAGTAATACATGTGTGTGGCAGTCAGAGGCTGGCAGTAGGACATTACAGTCACATTaGAAGAAACTGATGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VCMGMSNTCVWQSEAGSRTLQSH*KKLMGQ Trigger: CTGTCCCATCAGTTTCTTCCAATGTGACTGTAATGT...CCTACTGCCAGCCTCTGACTGCCACACACATGTATTACTCATGCCCATACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | ATTGATCTAAATGCCATCAGTCCTGCTTCTCTGGCTTACCCCTTTGCAATATTCACAGCTGCGCACATGTaGTGCGTATCCACAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: IDLNAISPASLAYPFAIFTAAHM*CVSTVL Trigger: CAGTACTGTGGATACGCACCACATGTGCGCAGCTGT...GAATATTGCAAAGGGGTAAGCCAGAGAAGCAGGACTGATGGCATTTAGATCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | CGAGATACCCTAGCAAGAGCTGGGACCCAGGAAGGCTaGCAATGCAGGATTTCTTACCAAGAAAAATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: RDTLARAGTQEG*QCRISYQEKLP Trigger: TGGTAATTTTTCTTGGTAAGAAATCCTGCATTGCAAGCCTTCCTGGGTCCCAGCTCTTGCTAGGGTATCTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR TCA 90 bp | ATTGATCTAAATGCCATCAGTCCTGCTTCTCTGGCTTACCCCTTTGCAATATTCGAGGGAGTGTTCTTATaGAGTTCCTCTGCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IDLNAISPASLAYPFAIFEGVFL*SSSAGT Trigger: TGTCCCTGCAGAGGAACTTCATAAGAACACTCCCTC...GAATATTGCAAAGGGGTAAGCCAGAGAAGCAGGACTGATGGCATTTAGATCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCCTCCCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTCCTTATTGCCAAGTaGAGCAAAAGCCACTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPPSCVCVCVCVCVCVYFLIAK*SKSHYK Trigger: TTTATAGTGGCTTTTGCTCCACTTGGCAATAAGGAA...ATACACACACACACACACACACACACACACACACACACAGGAGGGAGGCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| CDS-3UTR TCA 90 bp | CTGGAGAACTCAGTATGGAGTGACAGAACAAATGCTGGTTCTGGGTTTATAACACAAAGACTCTCTGGATaGTGCTTGCCAAGAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LENSVWSDRTNAGSGFITQRLSG*CLPRGS Trigger: AGAACCTCTTGGCAAGCATCATCCAGAGAGTCTTTG...TGTTATAAACCCAGAACCAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR TCA 90 bp | ATTGATCTAAATGCCATCAGTCCTGCTTCTCTGGCTTACCCCTTTGCAATATTCGGAGCATATGCCTTCTaGGTCTCTTTCCTGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: IDLNAISPASLAYPFAIFGAYAF*VSFLST Trigger: TGTTGACAGGAAAGAGACTCAGAAGGCATATGCTCC...GAATATTGCAAAGGGGTAAGCCAGAGAAGCAGGACTGATGGCATTTAGATCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTATGATCGACATGGCATaGAGCTTGTTCTCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSTSSALGLKVCSTIAGFMIDMA*SLFSDL Trigger: CAGATCTGAGAACAAGCTGCATGCCATGTCGATCAT...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | GTGTGTATGGGCATGAGTAATACATGTGTGTGGCAGTCAGAGGCTGGCAGTAGGAATTCATCTAGTTTCTaGAGGTGTGTAAATGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VCMGMSNTCVWQSEAGSRNSSSF*RCVNAC Trigger: ACATGCATTTACACACCTCCAGAAACTAGATGAATT...CCTACTGCCAGCCTCTGACTGCCACACACATGTATTACTCATGCCCATACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | TGTGTTGGGTTTGTAGAGTGTGTTTGCTCGTGTTCCTaGGATTTTCATCTGAGGAACAGTGTGAGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CVGFVECVCSCS*DFHLRNSVSST Trigger: AGTGCTACTCACACTGTTCCTCAGATGAAAATCCAAGGAACACGAGCAAACACACTCTACAAACCCAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | GCACAGCAGAGAGAAATGATCGACATGGCATGCAGCTaGTTCTCAGATCTGATGTATGGTCGCATACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: AQQREMIDMACS*FSDLMYGRIQI Trigger: TATTTGTATGCGACCATACATCAGATCTGAGAACAAGCTGCATGCCATGTCGATCATTTCTCTCTGCTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| 3UTR CAA 72 bp | TGCCTTCTGAGTCTCTTTCCTGTCAACAGACCTTCTTaGTCTGTAGTTGTGCCAGAGTTGATGGATCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLSLFPVNRPS*SVVVPELMDHF Trigger: GAAATGATCCATCAACTCTGGCACAACTACAGACAAAGAAGGTCTGTTGACAGGAAAGAGACTCAGAAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR GCA 90 bp | AAGCCACTGGAGAACTCAGTATGGAGTGACAGAACAAATGCTGGTTCTGGGTTTACCTCCTTCTTCACTTaGTTCTGTATTTCGGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: KPLENSVWSDRTNAGSGFTSFFT*FCISVT Trigger: AGTAACCGAAATACAGAAGCAAGTGAAGAAGGAGGT...AAACCCAGAACCAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAGTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | GTCAACAGACCTTCTTTGTCTGTAGTTGTGCCAGAGTaGATGGATCATTTCCTTGAAAGGTCTAGTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VNRPSLSVVVPE*MDHFLERSSGQ Trigger: TTGACCACTAGACCTTTCAAGGAAATGATCCATCAACTCTGGCACAACTACAGACAAAGAAGGTCTGTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
||
| CDS-3UTR TCA 90 bp | ATTGATCTAAATGCCATCAGTCCTGCTTCTCTGGCTTACCCCTTTGCAATATTCGTGGGGAAATTCGACTaGGGTGATTGTCTTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: IDLNAISPASLAYPFAIFVGKFD*GDCLQL Trigger: TAATTGAAGACAATCACCTCAGTCGAATTTCCCCAC...GAATATTGCAAAGGGGTAAGCCAGAGAAGCAGGACTGATGGCATTTAGATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR GCA 90 bp | AGATGTCGGCATATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCGAAAAGGATACACAATaGAGATGTACTTTTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RCRHIPSYRQIPLEALHSEKDTQ*RCTFPM Trigger: CATTGGAAAAGTACATCTGCATTGTGTATCCTTTTC...GCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGATATGCCGACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| CDS-3UTR CCA 90 bp | ATTGATCTAAATGCCATCAGTCCTGCTTCTCTGGCTTACCCCTTTGCAATATTCGGACAGCTCGTAAATTaGCTTCATCACAGTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IDLNAISPASLAYPFAIFGQLVN*LHHSQV Trigger: AACTTGACTGTGATGAAGCCAATTTACGAGCTGTCC...GAATATTGCAAAGGGGTAAGCCAGAGAAGCAGGACTGATGGCATTTAGATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| CDS-3UTR CCA 90 bp | AGATGTCGGCATATCCCTTCATATCGGCAAATCCCTCTAGAAGCACTTCACAGCCTCAGATCTGATGTATaGTCGCATACAAATAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCRHIPSYRQIPLEALHSLRSDV*SHTNNK Trigger: TTTGTTATTTGTATGCGACCATACATCAGATCTGAG...GCTGTGAAGTGCTTCTAGAGGGATTTGCCGATATGAAGGGATATGCCGACATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | CTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTTTAATGGTCGTACTAGGAAAACGGATACTTCTGTaGACAGAATGGCCAACGACC | + |
|
Preference number: 4 (lower is better) Translates to: LGLKVCSTIAGFLMVVLGKRILL*TEWPTT Trigger: GGTCGTTGGCCATTCTGTCCACAGAAGTATCCGTTT...TCCTAGTACGACCATTAAAAAGCCAGCTATGGTAGAACATACTTTTAATCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | AAATTTAGGGCCAGCACCTGCAAAATTGGTGCTGATTaGAGTTTCATTCTTCACCTCATGTGGATGGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KFRASTCKIGAD*SFILHLMWMVY Trigger: GTAAACCATCCACATGAGGTGAAGAATGAAACTCAAATCAGCACCAATTTTGCAGGTGCTGGCCCTAAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR TCA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTAAGAAAAATTACCACTaGATAAATCTGGGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSTSSALGLKVCSTIAGFKKNYH*INLGSS Trigger: ACTGGAGCCCAGATTTATTCAGTGGTAATTTTTCTT...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | ATTGATCTAAATGCCATCAGTCCTGCTTCTCTGGCTTACCCCTTTGCAATATTCAGAGGTAATAGAATCTaGTATTTCCACCTGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IDLNAISPASLAYPFAIFRGNRI*YFHLKQ Trigger: CTGCTTCAGGTGGAAATACCAGATTCTATTACCTCT...GAATATTGCAAAGGGGTAAGCCAGAGAAGCAGGACTGATGGCATTTAGATCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CCA 90 bp | GTCTCTACCTCCTCAGCACTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTCAACGTGTAGATAATTaGGTTCAAAGCACTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTSSALGLKVCSTIAGFQRVDN*VQSTVD Trigger: ATCAACAGTGCTTTGAACCCAATTATCTACACGTTG...AAAGCCAGCTATGGTAGAACATACTTTTAATCCCAGTGCTGAGGAGGTAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR TCA 90 bp | ATTGATCTAAATGCCATCAGTCCTGCTTCTCTGGCTTACCCCTTTGCAATATTCAAGGTTATTCTGTTATaGCTGAGGTACAGTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IDLNAISPASLAYPFAIFKVILL*LRYSLV Trigger: CACTAAACTGTACCTCAGTCATAACAGAATAACCTT...GAATATTGCAAAGGGGTAAGCCAGAGAAGCAGGACTGATGGCATTTAGATCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | TCTGGCAACAAAGCCTCCTTTAATAAATATGCTGTGTaGACTCTCAAGTGTGGTGACTCAATGAAGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGNKASFNKYAV*TLKCGDSMKNA Trigger: TGCATTCTTCATTGAGTCACCACACTTGAGAGTCAACACAGCATATTTATTAAAGGAGGCTTTGTTGCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| CDS-3UTR GCA 90 bp | CTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTTTAATGGTCGTACTAGGAAAATATTTGTCCAGTTaGAGAGACCACCCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLKVCSTIAGFLMVVLGKYLSS*RDHPLL Trigger: CAACAATGGGTGGTCTCTGCAACTGGACAAATATTT...TCCTAGTACGACCATTAAAAAGCCAGCTATGGTAGAACATACTTTTAATCCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| 3UTR CAA 72 bp | ACAGCTTTGTTTTATATGACCTTTATTAGGCTAGTTTaGGCTCCTTCAATTCTTAGTTTCCACGGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TALFYMTFIRLV*APSILSFHGAF Trigger: AAAAGCCCCGTGGAAACTAAGAATTGAAGGAGCCAAAACTAGCCTAATAAAGGTCATATAAAACAAAGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| 3UTR CAA 72 bp | AAGGCTGAGAGACTTGAGTTTGGCAAGACAATCGAATaGATTTACTTCAATTTTCTGGATTGGGTTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAERLEFGKTIE*IYFNFLDWVIR Trigger: TCTTATAACCCAATCCAGAAAATTGAAGTAAATCAATTCGATTGTCTTGCCAAACTCAAGTCTCTCAGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182491.7 |
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| CDS GCA 90 bp | CGCAGTGGTCCTCATCAGCTCGGTTCCCGCAGTCGTCCACACCATTaGAGTGAAGCAGCTGAGGCAGGCACCTGCTCATGTTCCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSGPHQLGSRSRPHH*SEAAEAGTCSCSHR Trigger: CCTGTGGGAACATGAGCAGGTGCCTGCCTCAGCTGCTTCACTGCAATGGTGTGGACGACTGCGGGAACCGAGCTGATGAGGACCACTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| CDS-3UTR CAA 90 bp | ATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCTGCAGAGACCACCCATaGTTGTCTCCGCAGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MPWCASGGQRTVFQSLFSCRDHP*LSPQWS Trigger: GGACCACTGCGGAGACAACAATGGGTGGTCTCTGCA...GGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| CDS-3UTR CAA 90 bp | AGCTTGCCTCCCTCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAAATCCCATCCGTGTaGGGCTTACAGCTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SLPPSCVCVCVCVCVCVYEIPSV*GLQLRT Trigger: TGTGCGCAGCTGTAAGCCCAACACGGATGGGATTTC...ATACACACACACACACACACACACACACACACACACACAGGAGGGAGGCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| CDS-3UTR CAA 90 bp | GGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCGGGACAGCTCGTAAATaGGCTTCATCACAGTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAQVEVRGQFSRVSSPSTGTARK*ASSQSS Trigger: ACTTGACTGTGATGAAGCCAATTTACGAGCTGTCCC...GGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | GCACACACATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCGTGAATCCTATTGTTTaGCAGGCACAGCTTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AHTCHGAQVEVRGQFSRVVNPIV*QAQLLQ Trigger: CTGCAGAAGCTGTGCCTGCAAAACAATAGGATTCAC...GACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCATGTGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCTACTCTCCCCGAAACTaGAGGTCAAAGGCACCAATC | + |
|
Preference number: 5 (lower is better) Translates to: MPWCASGGQRTVFQSLFSYSPRN*RSKAPI Trigger: GATTGGTGCCTTTGACCTCAAGTTTCGGGGAGAGTA...GGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | GCACACACATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCCACCTCCTTCTTCACTaGCTTCTGTATTTCGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: AHTCHGAQVEVRGQFSRVHLLLH*LLYFGY Trigger: GTAACCGAAATACAGAAGCAAGTGAAGAAGGAGGTG...GACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCATGTGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGTATGGGCATGAGTAATACATGTGTGTGGCAGTCAGAGGCTGGCAGTAGGTCAAGGCTGAGAGACTaGAGTTTGGCAAGACAATCG | + |
|
Preference number: 5 (lower is better) Translates to: VCMGMSNTCVWQSEAGSRSRLRD*SLARQS Trigger: CGATTGTCTTGCCAAACTCAAGTCTCTCAGCCTTGA...CCTACTGCCAGCCTCTGACTGCCACACACATGTATTACTCATGCCCATACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS CCA 90 bp | TGGCTTCATCACAGTCAAGTTCTAGATCTCGGCACAAACAATGCATaGGCACAGAGCCAACCAAGCATTCGGAAGTTTCTGCCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WLHHSQVLDLGTNNA*AQSQPSIRKFLPQR Trigger: CCTTTGAGGCAGAAACTTCCGAATGCTTGGTTGGCTCTGTGCCCATGCATTGTTTGTGCCGAGATCTAGAACTTGACTGTGATGAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGTGCGCAAGTGGAGGTCAGAGGACAGTTTTCCAGAGTCTCTTCTCCGACATTACAGTCACATaGGAAGAAACTGATGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MPWCASGGQRTVFQSLFSDITVT*EETDGT Trigger: TGTCCCATCAGTTTCTTCCAATGTGACTGTAATGTC...GGAGAAGAGACTCTGGAAAACTGTCCTCTGACCTCCACTTGCGCACCATGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS GCA 90 bp | TACTTCCTGAAGCCGTTGGGAGGGAGTGTTCTTATGAAGTTCCTCTaGAGGGACATTACAGTCACATTGGAAGAAACTGATGGGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YFLKPLGGSVLMKFL*RDITVTLEETDGTA Trigger: AGCTGTCCCATCAGTTTCTTCCAATGTGACTGTAATGTCCCTGCAGAGGAACTTCATAAGAACACTCCCTCCCAACGGCTTCAGGAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | CAGAGGACAGTTTTCCAGAGTCTCTTCTCCCTCTACCCTTCCGTGGGTTCCAGATTGAAAAATTCCTTATaGCCAAGTGGAGCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRTVFQSLFSLYPSVGSRLKNSL*PSGAKA Trigger: GGCTTTTGCTCCACTTGGCAATAAGGAATTTTTCAA...TCTGGAACCCACGGAAGGGTAGAGGGAGAAGAGACTCTGGAAAACTGTCCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS GCA 90 bp | AAATTGGCTTCATCACAGTCAAGTTCTAGATCTCGGCACAAACAATaGATGGGCACAGAGCCAACCAAGCATTCGGAAGTTTCTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLASSQSSSRSRHKQ*MGTEPTKHSEVSAS Trigger: TGAGGCAGAAACTTCCGAATGCTTGGTTGGCTCTGTGCCCATGCATTGTTTGTGCCGAGATCTAGAACTTGACTGTGATGAAGCCAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | CTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTTTAATGGTCGTACTAGGATGCAGAGACCACCCATaGTTGTCTCCGCAGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLKVCSTIAGFLMVVLGCRDHP*LSPQWS Trigger: GGACCACTGCGGAGACAACAATGGGTGGTCTCTGCA...TCCTAGTACGACCATTAAAAAGCCAGCTATGGTAGAACATACTTTTAATCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | AAGCCACTGGAGAACTCAGTATGGAGTGACAGAACAAATGCTGGTTCTGGGTTTGTAGTTGTGCCAGAGTaGATGGATCATTTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KPLENSVWSDRTNAGSGFVVVPE*MDHFLE Trigger: TTCAAGGAAATGATCCATCAACTCTGGCACAACTAC...AAACCCAGAACCAGCATTTGTTCTGTCACTCCATACTGAGTTCTCCAGTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | CTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTTTAATGGTCGTACTAGGAAAATTATGGATACGGTaGCCTTCAAAGTCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLKVCSTIAGFLMVVLGKLWIR*PSKSSQ Trigger: CTGGCTGGACTTTGAAGGCAACCGTATCCATAATTT...TCCTAGTACGACCATTAAAAAGCCAGCTATGGTAGAACATACTTTTAATCCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS-3UTR CAA 90 bp | CTGGGATTAAAAGTATGTTCTACCATAGCTGGCTTTTTAATGGTCGTACTAGGAGACATGGCATGCAGCTaGTTCTCAGATCTGATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGLKVCSTIAGFLMVVLGDMACS*FSDLMY Trigger: ATACATCAGATCTGAGAACAAGCTGCATGCCATGTC...TCCTAGTACGACCATTAAAAAGCCAGCTATGGTAGAACATACTTTTAATCCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
||
| CDS CAA 72 bp | GCAAAATATTTGTCCAGTTGCAGAGACCACCCATTGTaGTCTCCGCAGTGGTCCTCATCAGCTCGGTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AKYLSSCRDHPL*SPQWSSSARFP Trigger: CGGGAACCGAGCTGATGAGGACCACTGCGGAGACAACAATGGGTGGTCTCTGCAACTGGACAAATATTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
||
| CDS CCA 72 bp | CACAGTCAAGTTCTAGATCTCGGCACAAACAATGCATaGGCACAGAGCCAACCAAGCATTCGGAAGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSQVLDLGTNNA*AQSQPSIRKFL Trigger: CAGAAACTTCCGAATGCTTGGTTGGCTCTGTGCCCATGCATTGTTTGTGCCGAGATCTAGAACTTGACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| CDS CAA 72 bp | TTAGCAAAATATTTGTCCAGTTGCAGAGACCACCCATaGTTGTCTCCGCAGTGGTCCTCATCAGCTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LAKYLSSCRDHP*LSPQWSSSARF Trigger: GAACCGAGCTGATGAGGACCACTGCGGAGACAACAATGGGTGGTCTCTGCAACTGGACAAATATTTTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| CDS GCA 72 bp | TCATCACAGTCAAGTTCTAGATCTCGGCACAAACAATaGATGGGCACAGAGCCAACCAAGCATTCGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SSQSSSRSRHKQ*MGTEPTKHSEV Trigger: AACTTCCGAATGCTTGGTTGGCTCTGTGCCCATGCATTGTTTGTGCCGAGATCTAGAACTTGACTGTGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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| CDS CAA 90 bp | GTTAGTGGAAGCCAGTTTATAGTAATTAGCAAAATATTTGTCCAGTaGCAGAGACCACCCATTGTTGTCTCCGCAGTGGTCCTCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VSGSQFIVISKIFVQ*QRPPIVVSAVVLIS Trigger: GCTGATGAGGACCACTGCGGAGACAACAATGGGTGGTCTCTGCAACTGGACAAATATTTTGCTAATTACTATAAACTGGCTTCCACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078527.13 ENSMUST00000182491.7 |
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| CDS TCA 72 bp | AAATGCCACCAGGTTAATACCAAGAAAAATTACCACTaGATAAATCTGGGCTCCAGTACTTCCCGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KCHQVNTKKNYH*INLGSSTSRVF Trigger: GAAGACACGGGAAGTACTGGAGCCCAGATTTATTCAGTGGTAATTTTTCTTGGTATTAACCTGGTGGCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078527.13 |
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