Pregenerated sensors for RUVBL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003868Ensembl transcript IDs: ENSMUST00000107771.12, ENSMUST00000209426.2, ENSMUST00000210271.2, ENSMUST00000210439.2, ENSMUST00000211214.2, ENSMUST00000211440.2, ENSMUST00000211666.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGATCTTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTACCCAGGTCGTAGATaGTCTCCATCTCCGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: EILPVALSMVMTSPAWTLYPGRR*SPSPWS Trigger: AGACCACGGAGATGGAGACCATCTACGACCTGGGTA...CAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAAGATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACAGAACTTGTAGAAAATaGGGTGGGAAGGGCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PNKGFPTALPCSLVGSEDRTCRK*GGKGWG Trigger: ACCCCAGCCCTTCCCACCCCATTTTCTACAAGTTCT...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR TCA 90 bp | GCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTCCTTGGTCTGGCTGGCCTGCAATaGGGACGGCCCGCCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: AGGLVNGDDVSGLDLVLGLAGLQ*GRPALQ Trigger: TTGCAGGGCGGGCCGTCCTCATTGCAGGCCAGCCAG...ACCAAGGACAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR GCA 90 bp | GCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTCCTTGGTCGCCGGGCAGCTAGCTaGCCCACCATTCCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: AGGLVNGDDVSGLDLVLGRRAAS*PTIPWE Trigger: TTCCCAGGGAATGGTGGGGCAGCTAGCTGCCCGGCG...ACCAAGGACAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR CCA 90 bp | GGAGATCTTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTTCGGGGCCCAGTGCCTaGGCCATGCCCATGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: GDLAGGLVNGDDVSGLDLSGPSA*AMPMAM Trigger: CATTGCCATGGGCATGGCCCAGGCACTGGGCCCCGA...AAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAAGATCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR TCA 90 bp | GTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTCCTTGGTCAGGTGCCTGCGATGGCTGTaGATGGTGTGTCGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VALSMVMTSPAWTLSLVRCLRWL*MVCRGP Trigger: TGGGCCCCGACACACCATTCACAGCCATCGCAGGCA...CCTGACCAAGGACAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR CCA 90 bp | GCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTCCTTGGTCCTGGGCCATGCCCATaGCAATGGCTGTCTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGGLVNGDDVSGLDLVLGPGPCP*QWLSSQ Trigger: CTGGGAAGACAGCCATTGCCATGGGCATGGCCCAGG...ACCAAGGACAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR CCA 90 bp | GCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTCCTTGGTTGCGATGGCTGTGAATaGTGTGTCGGGGCCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: AGGLVNGDDVSGLDLVLGCDGCE*CVGAQC Trigger: GCACTGGGCCCCGACACACCATTCACAGCCATCGCA...ACCAAGGACAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR GCA 90 bp | GGAGATCTTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGAGGACGGCCCGCCCTaGAATCTTCCCTTCTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GDLAGGLVNGDDVSGLDLEDGPP*NLPFSD Trigger: ATCCGAGAAGGGAAGATTGCAGGGCGGGCCGTCCTC...AAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAAGATCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR CCA 90 bp | GAGATCTTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTGCCCCACCATTCCCTaGGAAGCCTGTCTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EILPVALSMVMTSPAWTLCPTIP*EACLGS Trigger: GGAGCCAAGACAGGCTTCCCAGGGAATGGTGGGGCA...CAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAAGATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR CCA 90 bp | GGAGATCTTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTCTGGGAAGCCTGTCTTaGCTCCAGGGCATCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDLAGGLVNGDDVSGLDLLGSLS*LQGIIQ Trigger: CTGGATGATGCCCTGGAGCCAAGACAGGCTTCCCAG...AAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAAGATCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR CCA 90 bp | TTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTCCTTGTGTCTTCCCAGTGCCTaGCTGGCCTGCAATGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPVALSMVMTSPAWTLSLCLPSA*LACNED Trigger: GTCCTCATTGCAGGCCAGCCAGGCACTGGGAAGACA...CAAGGACAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR CCA 90 bp | GTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTCCTTGGTCAGGCCATGCCCATGGCAATaGCTGTCTTCCCAGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VALSMVMTSPAWTLSLVRPCPWQ*LSSQCL Trigger: CAGGCACTGGGAAGACAGCCATTGCCATGGGCATGG...CCTGACCAAGGACAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR TCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACCTGGCTGGCCTGCAATaGGGACGGCCCGCCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDLAGLQ*GRPALQ Trigger: TTGCAGGGCGGGCCGTCCTCATTGCAGGCCAGCCAG...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCATGTGTCGGGGCCCAGTaGCTGGGCCATGCCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGFPTALPCSLVGSEDTACVGAQ*LGHAHG Trigger: GCCATGGGCATGGCCCAGGCACTGGGCCCCGACACA...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | TTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGTCCTTGTCAGTTTGCCCACCTTaGATCCTTGATCCGGACACC | + |
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Preference number: 4 (lower is better) Translates to: LPVALSMVMTSPAWTLSLSVCPP*ILDPDT Trigger: GGTGTCCGGATCAAGGATCCAAGGTGGGCAAACTGA...CAAGGACAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCACGCCGGGCAGCTAGCTaGCCCACCATTCCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGFPTALPCSLVGSEDTARRAAS*PTIPWE Trigger: TTCCCAGGGAATGGTGGGGCAGCTAGCTGCCCGGCG...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACTCGGGGCCCAGTGCCTaGGCCATGCCCATGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDSGPSA*AMPMAM Trigger: CATTGCCATGGGCATGGCCCAGGCACTGGGCCCCGA...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR TCA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCATGCCTGCGATGGCTGTaGATGGTGTGTCGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KGFPTALPCSLVGSEDTACLRWL*MVCRGP Trigger: TGGGCCCCGACACACCATTCACAGCCATCGCAGGCA...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR TCA 90 bp | CCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAAGTCCCGTGCACGTGTaGAAGAGCGGCCCAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PSLLPNKGFPTALPCSLVSPVHV*KSGPAW Trigger: CCAAGCTGGGCCGCTCTTTCACACGTGCACGGGACT...TACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR TCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACCTCCCCTGTGTCTCCTaGGAAGAGGGCCAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDLPCVS*EEGQEA Trigger: GGCTTCCTGGCCCTCTTCTCAGGAGACACAGGGGAG...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR GCA 90 bp | GGAGATCTTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTAAAGATCTCACTGCCTaGGATGGCTGTGAATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GDLAGGLVNGDDVSGLDLKDLTA*DGCEWC Trigger: ACACCATTCACAGCCATCGCAGGCAGTGAGATCTTT...AAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAAGATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR GCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACGGCGTCGTAGTCCCGTaGACGTGTGAAAGAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDGVVVP*TCERAA Trigger: GGCCGCTCTTTCACACGTGCACGGGACTACGACGCC...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTATGGTCTGGGAGCCCATaGCGTCGTAGTCCCGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSLLPNKGFPTALPCSLVWSGSP*RRSPVH Trigger: GTGCACGGGACTACGACGCCATGGGCTCCCAGACCA...TACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAGAGGACGGCCCGCCCTaGAATCTTCCCTTCTCGGAT | + |
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Preference number: 4 (lower is better) Translates to: KGFPTALPCSLVGSEDTAEDGPP*NLPFSD Trigger: ATCCGAGAAGGGAAGATTGCAGGGCGGGCCGTCCTC...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACTGCCCCACCATTCCCTaGGAAGCCTGTCTTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDCPTIP*EACLGS Trigger: GGAGCCAAGACAGGCTTCCCAGGGAATGGTGGGGCA...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCCCTGGGCCATGCCCATaGCAATGGCTGTCTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGPGPCP*QWLSSQ Trigger: CTGGGAAGACAGCCATTGCCATGGGCATGGCCCAGG...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTGCGATGGCTGTGAATaGTGTGTCGGGGCCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGCDGCE*CVGAQC Trigger: GCACTGGGCCCCGACACACCATTCACAGCCATCGCA...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACTCCCGTGCCTGTGGCTaGCCGGTCAATCTGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDSRACG*PVNLDL Trigger: GAGATCCAGATTGACCGGCCAGCCACAGGCACGGGA...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCAAGAGCGGCCCAGCTTaGAGATCTTGCCGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGKSGPA*RSCRWP Trigger: AGGCCACCGGCAAGATCTCCAAGCTGGGCCGCTCTT...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR GCA 90 bp | GGAGATCTTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTTTAGAGCCTCAGTCTTaGTCATCTCCAGAGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GDLAGGLVNGDDVSGLDLLEPQS*SSPEKR Trigger: TCTTTTCTCTGGAGATGAGCAAGACTGAGGCTCTAA...AAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAAGATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTGGAGGGACACGGTGTaGACCACCTCCTTGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGWRDTV*TTSLRF Trigger: GAAACGCAAGGAGGTGGTGCACACCGTGTCCCTCCA...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR GCA 90 bp | AATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAGGTCGATGGGGATaGCGTGGGGACTCTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: NKGFPTALPCSLVGSEDTAGRWG*RGDSGS Trigger: GCTACCAGAGTCCCCACGGCATCCCCATCGACCTGC...TGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACTCTCAGGGACTTTGGTaGTGGCTGCCACGGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDSQGLW*WLPRLP Trigger: TGGCAACCGTGGCAGCCACCACCAAAGTCCCTGAGA...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCACTGGGAAGCCTGTCTTaGCTCCAGGGCATCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: KGFPTALPCSLVGSEDTALGSLS*LQGIIQ Trigger: CTGGATGATGCCCTGGAGCCAAGACAGGCTTCCCAG...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTATGTCTTCCCAGTGCCTaGCTGGCCTGCAATGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PSLLPNKGFPTALPCSLVCLPSA*LACNED Trigger: GTCCTCATTGCAGGCCAGCCAGGCACTGGGAAGACA...TACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCCCATGCCCATGGCAATaGCTGTCTTCCCAGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGPCPWQ*LSSQCL Trigger: CAGGCACTGGGAAGACAGCCATTGCCATGGGCATGG...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGCTGGCCGGTCAATCTaGATCTCTACCACCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PSLLPNKGFPTALPCSLVAGRSI*ISTTSP Trigger: AGGGGAGGTGGTAGAGATCCAGATTGACCGGCCAGC...TACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CCA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAATGACGTCTCCGGCCTaGACCTTGTCCTTGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KGFPTALPCSLVGSEDTAMTSPA*TLSLVR Trigger: CCTGACCAAGGACAAGGTCCAGGCCGGAGACGTCAT...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR TCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACCTCGGACTTCTGACTTaGTCTCCCCTGTGTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDLGLLT*SPLCLL Trigger: CAGGAGACACAGGGGAGATCAAGTCAGAAGTCCGAG...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR GCA 90 bp | CCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTACCAGCTTGGAGATCTTaGCGGTGGCCTTGTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: PSLLPNKGFPTALPCSLVPAWRS*RWPCQW Trigger: CCATTGACAAGGCCACCGGCAAGATCTCCAAGCTGG...TACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTGTGCACCACCTCCTTaGGTTTCTGCAGCTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGCAPPP*VSAALR Trigger: ACGGAGAGCTGCAGAAACGCAAGGAGGTGGTGCACA...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCACCCAGGAATGATCTCTaGCTTGCCCTCCTCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGFPTALPCSLVGSEDTAPRNDL*LALLSP Trigger: TGGAGAGAGGAGGGCAAGGCAGAGATCATTCCTGGG...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR TCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCCTGTTCTCGGACTTCTaGCTTGATCTCCCCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGLFSDF*LDLPCV Trigger: GACACAGGGGAGATCAAGTCAGAAGTCCGAGAACAG...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR TCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTCCAGGGCCCGGTTaGGGAAAGAGAAACTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGSPGPG*GKRNSQ Trigger: TTGAGAGTTTCTCTTTCCTCAACCGGGCCCTGGAGA...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR GCA 90 bp | AATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAACCTCCTTGCGTTTCTaGAGCTCTCCGTCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKGFPTALPCSLVGSEDTTSLRF*SSPSGH Trigger: GTGCCCAGACGGAGAGCTGCAGAAACGCAAGGAGGT...TGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCACCTCCTCACAGCGGATaGGCAGAATCTGCTTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KGFPTALPCSLVGSEDTAPPHSG*AESAWY Trigger: ATACCAAGCAGATTCTGCGCATCCGCTGTGAGGAGG...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTACCCAGGTCGTAGATaGTCTCCATCTCCGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGYPGRR*SPSPWS Trigger: AGACCACGGAGATGGAGACCATCTACGACCTGGGTA...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACGGGACTCGATCATCTTaGTACCCAGGTCGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDGTRSS*YPGRRW Trigger: CCATCTACGACCTGGGTACCAAGATGATCGAGTCCC...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAATGACGTCAATCTCATaGAGGGACACGGTGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLPNKGFPTALPCSLVMTSIS*RDTVCT Trigger: GGTGCACACCGTGTCCCTCCATGAGATTGACGTCAT...TACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR GCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACCCACTCAGCCACCTTTaGATTGATCTGTTCTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDPLSHL*IDLFSD Trigger: GTCCGAGAACAGATCAATGCAAAGGTGGCTGAGTGG...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR GCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACTTAATGTCATCGACCTaGACCTCGGTGCCCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDLMSST*TSVPFR Trigger: ACGAAAGGGCACCGAGGTGCAGGTCGATGACATTAA...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACCCTTCATGTACTGTGTaGAGCGGGATTCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDPSCTV*SGIHPG Trigger: TCCTGGATGAATCCCGCTCCACACAGTACATGAAGG...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR TCA 90 bp | AATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACACAGCCACCTTTGCATTaGTCTGTTCTCGGACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKGFPTALPCSLVGSEDTQPPLH*SVLGLL Trigger: CAGAAGTCCGAGAACAGATCAATGCAAAGGTGGCTG...TGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR GCA 90 bp | AATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAAAAGATCTCACTGCCTaGGATGGCTGTGAATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKGFPTALPCSLVGSEDTKDLTA*DGCEWC Trigger: ACACCATTCACAGCCATCGCAGGCAGTGAGATCTTT...TGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTTAGAGCCTCAGTCTTaGTCATCTCCAGAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLPNKGFPTALPCSLVGLEPQS*SSPEKR Trigger: TCTTTTCTCTGGAGATGAGCAAGACTGAGGCTCTAA...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CCA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACAAGAGGAAGGCATCTTaGTACTCCTTCATGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNKGFPTALPCSLVGSEDKRKAS*YSFMYC Trigger: ACAGTACATGAAGGAGTACCAAGATGCCTTCCTCTT...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CAA 90 bp | GAGATCTTGCCGGTGGCCTTGTCAATGGTGATGACGTCTCCGGCCTGGACCTTGCCTGGGAAGCCTGTCTaGGCTCCAGGGCATCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: EILPVALSMVMTSPAWTLPGKPV*APGHHP Trigger: TGGATGATGCCCTGGAGCCAAGACAGGCTTCCCAGG...CAAGGTCCAGGCCGGAGACGTCATCACCATTGACAAGGCCACCGGCAAGATCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211440.2 |
||
| CDS TCA 90 bp | GAATCTGCTTGGTATCCTTCTCACTGTAGGGTGACGTTGATACAATaGGCAAGCGGTCCAGCAGGTCGATGGGGATGCCGTGGGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESAWYPSHCRVTLIQ*ASGPAGRWGCRGDS Trigger: AGAGTCCCCACGGCATCCCCATCGACCTGCTGGACCGCTTGCTCATTGTATCAACGTCACCCTACAGTGAGAAGGATACCAAGCAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107771.12 ENSMUST00000209426.2 ENSMUST00000211214.2 |
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| CDS-3UTR CAA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAAAAGAGCGGCCCAGCTaGGAGATCTTGCCGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGFPTALPCSLVGSEDTAKERPS*EILPVA Trigger: GGCCACCGGCAAGATCTCCAAGCTGGGCCGCTCTTT...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCCGGATCTCAGGGACTTaGGTGGTGGCTGCCACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLPNKGFPTALPCSLVGRISGT*VVAATV Trigger: AACCGTGGCAGCCACCACCAAAGTCCCTGAGATCCG...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCACCTGGGAAGCCTGTCTaGGCTCCAGGGCATCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGFPTALPCSLVGSEDTAPGKPV*APGHHP Trigger: TGGATGATGCCCTGGAGCCAAGACAGGCTTCCCAGG...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAGTGTGCACCACCTCCTaGCGTTTCTGCAGCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KGFPTALPCSLVGSEDTAVCTTS*RFCSSP Trigger: CGGAGAGCTGCAGAAACGCAAGGAGGTGGTGCACAC...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCCGGGTGATCCCTCGGTaGGTGGCCATGATGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLLPNKGFPTALPCSLVGRVIPR*VAMMRT Trigger: TGTCCTCATCATGGCCACCAACCGAGGGATCACCCG...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCCCCAGCTTGGAGATCTaGCCGGTGGCCTTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLLPNKGFPTALPCSLVGPSLEI*PVALSM Trigger: CATTGACAAGGCCACCGGCAAGATCTCCAAGCTGGG...GCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAGGAATGATCTCTGCCTaGCCCTCCTCTCTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGFPTALPCSLVGSEDTAGMISA*PSSLHS Trigger: TGAGTGGAGAGAGGAGGGCAAGGCAGAGATCATTCC...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCACTCTCCAGGGCCCGGTaGAGGAAAGAGAAACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGFPTALPCSLVGSEDTALSRAR*RKEKLS Trigger: TGAGAGTTTCTCTTTCCTCAACCGGGCCCTGGAGAG...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTATCTCGGACTTCTGACTaGATCTCCCCTGTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSLLPNKGFPTALPCSLVSRTSD*ISPVSP Trigger: AGGAGACACAGGGGAGATCAAGTCAGAAGTCCGAGA...TACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS CCA 90 bp | GTGTCCATTGTTTCGCCTTTGAGCTCATTGAAGAGGAAGGCATCTTaGTACTCCTTCATGTACTGTGTGGAGCGGGATTCATCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSIVSPLSSLKRKAS*YSFMYCVERDSSRK Trigger: CTTCCTGGATGAATCCCGCTCCACACAGTACATGAAGGAGTACCAAGATGCCTTCCTCTTCAATGAGCTCAAAGGCGAAACAATGGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107771.12 ENSMUST00000211214.2 |
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| CDS-3UTR CAA 90 bp | AAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCATCGCCTTTGAGCTCATaGAAGAGGAAGGCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGFPTALPCSLVGSEDTASPLSS*KRKASW Trigger: CCAAGATGCCTTCCTCTTCAATGAGCTCAAAGGCGA...TGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CAA 90 bp | CCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACTCAGCCACCTTTGCATaGATCTGTTCTCGGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PNKGFPTALPCSLVGSEDSATFA*ICSRTS Trigger: AGAAGTCCGAGAACAGATCAATGCAAAGGTGGCTGA...GTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS-3UTR CAA 90 bp | AATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACATCCATTGTTTCGCCTTaGAGCTCATTGAAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKGFPTALPCSLVGSEDTSIVSP*SSLKRK Trigger: CTTCCTCTTCAATGAGCTCAAAGGCGAAACAATGGA...TGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211214.2 |
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| CDS CCA 72 bp | GCTGCACGCCGGGCAGCTAGCTGCCCCACCATTCCCTaGGAAGCCTGTCTTGGCTCCAGGGCATCATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AARRAASCPTIP*EACLGSRASSS Trigger: ACTGGATGATGCCCTGGAGCCAAGACAGGCTTCCCAGGGAATGGTGGGGCAGCTAGCTGCCCGGCGTGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107771.12 ENSMUST00000211214.2 ENSMUST00000211440.2 ENSMUST00000211666.2 |
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| CDS CCA 72 bp | GGCCATGCCCATGGCAATGGCTGTCTTCCCAGTGCCTaGCTGGCCTGCAATGAGGACGGCCCGCCCTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GHAHGNGCLPSA*LACNEDGPPCN Trigger: ATTGCAGGGCGGGCCGTCCTCATTGCAGGCCAGCCAGGCACTGGGAAGACAGCCATTGCCATGGGCATGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 ENSMUST00000211440.2 ENSMUST00000211666.2 |
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| CDS CCA 72 bp | ATGCCCATGGCAATGGCTGTCTTCCCAGTGCCTGGCTaGCCTGCAATGAGGACGGCCCGCCCTGCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MPMAMAVFPVPG*PAMRTARPAIF Trigger: GAAGATTGCAGGGCGGGCCGTCCTCATTGCAGGCCAGCCAGGCACTGGGAAGACAGCCATTGCCATGGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 ENSMUST00000211440.2 ENSMUST00000211666.2 |
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| CDS GCA 72 bp | GCTGGATGGCATAGCGCAGGGAGGTCTCGAGCCCAATaGGGGTCAGCACTGTGTAGGCGTCCTCACTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: AGWHSAGRSRAQ*GSALCRRPHSS Trigger: AGATGAGTGAGGACGCCTACACAGTGCTGACCCGCATTGGGCTCGAGACCTCCCTGCGCTATGCCATCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107771.12 ENSMUST00000209426.2 ENSMUST00000210271.2 ENSMUST00000211214.2 |
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| CDS CCA 72 bp | CCGCCCTGCAATCTTCCCTTCTCGGATCATCTGTCTTaGCTCCAGGGCATCATCCAGTCCCAGCCCCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPCNLPFSDHLS*LQGIIQSQPPD Trigger: ATCCGGGGGCTGGGACTGGATGATGCCCTGGAGCCAAGACAGATGATCCGAGAAGGGAAGATTGCAGGGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210439.2 |
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| CDS GCA 72 bp | TGGAGGGACACGGTGTGCACCACCTCCTTGCGTTTCTaGAGCTCTCCGTCTGGGCACTGCACAAACTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WRDTVCTTSLRF*SSPSGHCTNLV Trigger: GACCAAGTTTGTGCAGTGCCCAGACGGAGAGCTGCAGAAACGCAAGGAGGTGGTGCACACCGTGTCCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 |
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| CDS GCA 72 bp | CAATCTCATGGAGGGACACGGTGTGCACCACCTCCTTaGGTTTCTGCAGCTCTCCGTCTGGGCACTGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: QSHGGTRCAPPP*VSAALRLGTAQ Trigger: TTGTGCAGTGCCCAGACGGAGAGCTGCAGAAACGCAAGGAGGTGGTGCACACCGTGTCCCTCCATGAGATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 |
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| CDS CAA 72 bp | TCAATCTCATGGAGGGACACGGTGTGCACCACCTCCTaGCGTTTCTGCAGCTCTCCGTCTGGGCACTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: SISWRDTVCTTS*RFCSSPSGHCT Trigger: TGTGCAGTGCCCAGACGGAGAGCTGCAGAAACGCAAGGAGGTGGTGCACACCGTGTCCCTCCATGAGATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 |
||
| CDS CCA 72 bp | ACCTTGGATCCCGTGCCTGTGGCTGGCCGGTCAATCTaGATCTCTACCACCTCCCCTTCAATGATCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TLDPVPVAGRSI*ISTTSPSMISV Trigger: GACAGAGATCATTGAAGGGGAGGTGGTAGAGATCCAGATTGACCGGCCAGCCACAGGCACGGGATCCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 ENSMUST00000211666.2 |
||
| CDS CAA 90 bp | TTGATGACGTCAATCTCATGGAGGGACACGGTGTGCACCACCTCCTaGCGTTTCTGCAGCTCTCCGTCTGGGCACTGCACAAACTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LMTSISWRDTVCTTS*RFCSSPSGHCTNLV Trigger: GACCAAGTTTGTGCAGTGCCCAGACGGAGAGCTGCAGAAACGCAAGGAGGTGGTGCACACCGTGTCCCTCCATGAGATTGACGTCATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 |
||
| CDS CAA 90 bp | ATCTGGATCTCTACCACCTCCCCTTCAATGATCTCTGTCTCCTCCTaGATCCGGACACCAATGGAACGGCGGAAGGCTTGCGTTAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: IWISTTSPSMISVSS*IRTPMERRKACVRA Trigger: GGCTCTAACGCAAGCCTTCCGCCGTTCCATTGGTGTCCGGATCAAGGAGGAGACAGAGATCATTGAAGGGGAGGTGGTAGAGATCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 ENSMUST00000211666.2 |
||
| CDS TCA 72 bp | TGGTATCCTTCTCACTGTAGGGTGACGTTGATACAATaGGCAAGCGGTCCAGCAGGTCGATGGGGATGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: WYPSHCRVTLIQ*ASGPAGRWGCR Trigger: ACGGCATCCCCATCGACCTGCTGGACCGCTTGCTCATTGTATCAACGTCACCCTACAGTGAGAAGGATACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107771.12 ENSMUST00000209426.2 ENSMUST00000211214.2 |
||
| CDS GCA 72 bp | TGGAACGGCGGAAGGCTTGCGTTAGAGCCTCAGTCTTaGTCATCTCCAGAGAAAAGATCTCACTGCCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: WNGGRLALEPQS*SSPEKRSHCLR Trigger: TCGCAGGCAGTGAGATCTTTTCTCTGGAGATGAGCAAGACTGAGGCTCTAACGCAAGCCTTCCGCCGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 ENSMUST00000211440.2 ENSMUST00000211666.2 |
||
| CDS GCA 72 bp | TCCTTGATCCGGACACCAATGGAACGGCGGAAGGCTTaGGTTAGAGCCTCAGTCTTGCTCATCTCCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLIRTPMERRKA*VRASVLLISRE Trigger: TTCTCTGGAGATGAGCAAGACTGAGGCTCTAACGCAAGCCTTCCGCCGTTCCATTGGTGTCCGGATCAAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000107771.12 ENSMUST00000210439.2 ENSMUST00000211214.2 ENSMUST00000211440.2 ENSMUST00000211666.2 |
||
| CDS CAA 72 bp | GCCACCTTTGCATTGATCTGTTCTCGGACTTCTGACTaGATCTCCCCTGTGTCTCCTGAGAAGAGGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ATFALICSRTSD*ISPVSPEKRAR Trigger: CCTGGCCCTCTTCTCAGGAGACACAGGGGAGATCAAGTCAGAAGTCCGAGAACAGATCAATGCAAAGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107771.12 ENSMUST00000211214.2 |
||
| CDS CCA 72 bp | AGAGGAAGGCATCTTGGTACTCCTTCATGTACTGTGTaGAGCGGGATTCATCCAGGAAGAGGGAGTATACAC | + |
|
Preference number: 6 (lower is better) Translates to: RGRHLGTPSCTV*SGIHPGRGSIH Trigger: GTGTATACTCCCTCTTCCTGGATGAATCCCGCTCCACACAGTACATGAAGGAGTACCAAGATGCCTTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107771.12 ENSMUST00000211214.2 |
||
| CDS CAA 90 bp | GGTGTCCATTGTTTCGCCTTTGAGCTCATTGAAGAGGAAGGCATCTaGGTACTCCTTCATGTACTGTGTGGAGCGGGATTCATCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GVHCFAFELIEEEGI*VLLHVLCGAGFIQE Trigger: TTCCTGGATGAATCCCGCTCCACACAGTACATGAAGGAGTACCAAGATGCCTTCCTCTTCAATGAGCTCAAAGGCGAAACAATGGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107771.12 ENSMUST00000211214.2 |
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| CDS CCA 72 bp | GTTTCGCCTTTGAGCTCATTGAAGAGGAAGGCATCTTaGTACTCCTTCATGTACTGTGTGGAGCGGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: VSPLSSLKRKAS*YSFMYCVERDS Trigger: TGAATCCCGCTCCACACAGTACATGAAGGAGTACCAAGATGCCTTCCTCTTCAATGAGCTCAAAGGCGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107771.12 ENSMUST00000211214.2 |
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| CDS CCA 72 bp | GTTTCGCCTTTGAGCTCATTGAAGAGGAAGGCATCTTaGTACTCCTTCATGTACTTTCGTTTCCGGCACACC | + |
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Preference number: 6 (lower is better) Translates to: VSPLSSLKRKAS*YSFMYFRFRHT Trigger: GGTGTGCCGGAAACGAAAGTACATGAAGGAGTACCAAGATGCCTTCCTCTTCAATGAGCTCAAAGGCGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209426.2 |
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