Pregenerated sensors for RUVBL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030079Ensembl transcript IDs: ENSMUST00000032165.16, ENSMUST00000129035.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCCCCCTGTGCACGGTGTaGGGTCCGTCTCTGGGTGCG | + |
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Preference number: 2 (lower is better) Translates to: PNHHGGLIIYKETVTLQSPLCTV*GPSLGA Trigger: CGCACCCAGAGACGGACCCCACACCGTGCACAGGGG...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| 3UTR TCA 72 bp | AATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTaGGGCGAGCCCCTGTGCACGGTGTGGGGTCCGTCT | + |
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Preference number: 3 (lower is better) Translates to: NLQRNCNTAKHA*GEPLCTVWGPS Trigger: AGACGGACCCCACACCGTGCACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| 3UTR CCA 72 bp | CAAGCTAGGTGGGGAAGGGATCCTTCCAAACCACCATaGAGGTTTGATAATTTACAAAGAAACTGTAACACT | + |
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Preference number: 3 (lower is better) Translates to: QARWGRDPSKPP*RFDNLQRNCNT Trigger: AGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGGAAGGATCCCTTCCCCACCTAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| 3UTR CCA 72 bp | AATAACCTATTCAGTTTTATTAGAAAACAAGCTAGGTaGGGAAGGGATCCTTCCAAACCACCATGGAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: NNLFSFIRKQAR*GRDPSKPPWRF Trigger: AAACCTCCATGGTGGTTTGGAAGGATCCCTTCCCCACCTAGCTTGTTTTCTAATAAAACTGAATAGGTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTGGCTGTGGGAGGCGATaGGCTGCGTCTTCGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IIYKETVTLQSMLEASPCGCGRR*AASSWC Trigger: GCACCACGAAGACGCAGCGCATCGCCTCCCACAGCC...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTCCCTTCACGTGGCTGTaGGAGGCGATGCGCTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: IIYKETVTLQSMLEASPCPFTWL*EAMRCV Trigger: GACGCAGCGCATCGCCTCCCACAGCCACGTGAAGGG...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCGGGCCAAGGCTGTCTTaGCAGTTCCAGGAGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PNHHGGLIIYKETVTLQSGPRLS*QFQEAP Trigger: CGGGGCCTCCTGGAACTGGCAAGACAGCCTTGGCCC...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTCCGAAGCCGCCTGCTTaGCTAGGCCGCTCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPWRFDNLQRNCNTAKHAPKPPA*LGRSRP Trigger: TGGACGAGAGCGGCCTAGCCAAGCAGGCGGCTTCGG...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | GGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGTCTCTCGCGTTCTCCTaGCCCACGAGACCCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GGLIIYKETVTLQSMLEASLAFS*PTRPEA Trigger: GGCTTCGGGTCTCGTGGGCCAGGAGAACGCGAGAGA...CGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTCCCAGACCCTTCACGTaGCTGTGGGAGGCGATGCGC | + |
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Preference number: 4 (lower is better) Translates to: HHGGLIIYKETVTLQSMLPRPFT*LWEAMR Trigger: GCGCATCGCCTCCCACAGCCACGTGAAGGGTCTGGG...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCCCAATCTCCCCGAGGTaGTTCAGCGCCTCCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNHHGGLIIYKETVTLQSPISPR*FSASSL Trigger: CAGCGAGGAGGCGCTGAACCACCTCGGGGAGATTGG...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGCCAGCAGGTTGGCTaGGGTCAGCAGCTGCACCGA | + |
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Preference number: 4 (lower is better) Translates to: PPWRFDNLQRNCNTAKHACQQVG*GQQLHR Trigger: TCGGTGCAGCTGCTGACCCCAGCCAACCTGCTGGCA...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTTCTTTGCCAGCAGGTTaGCTGGGGTCAGCAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: IIYKETVTLQSMLEASPCSLPAG*LGSAAA Trigger: TGCAGCTGCTGACCCCAGCCAACCTGCTGGCAAAGA...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCTGGGAGGCGATGCGCTaGGTCTTCGTGGTGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PNHHGGLIIYKETVTLQSWEAMR*VFVVLF Trigger: GAAGAGCACCACGAAGACGCAGCGCATCGCCTCCCA...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | GGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGTGCCGTACCCACCCATaGGGTTCTCTGTCTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GGLIIYKETVTLQSMLEACRTHP*GSLSHR Trigger: CCTGTGAGACAGAGAACCCCATGGGTGGGTACGGCA...CGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR TCA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTCTGTCTCACAGGGAGTaGGCTCTGTCACCTCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PPWRFDNLQRNCNTAKHALSHRE*ALSPPL Trigger: AAGGGGAGGTGACAGAGCTCACTCCCTGTGAGACAG...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR TCA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATATCTTGCCCACCCTaGGGCCGCGCATTAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PNHHGGLIIYKETVTLQSISCPP*GRALAT Trigger: TGTGGCTAATGCGCGGCCTCAGGGTGGGCAAGATAT...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | GGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCGCAACCCAATGGCCCTaGGGAAGTTCTCCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GLIIYKETVTLQSMLEASATQWP*GSSPSA Trigger: TGCTGATGGAGAACTTCCGCAGGGCCATTGGGTTGC...GCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | GGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCTGCGCTGCGTCTTCGTaGTGCTCTTCACCTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: GLIIYKETVTLQSMLEASCAASS*CSSPPQ Trigger: TTGAGGAGGTGAAGAGCACCACGAAGACGCAGCGCA...GCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | GGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGACCTCAGAGTGGTCTTaGTGCCAATCTCCCCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GGLIIYKETVTLQSMLEATSEWS*CQSPRG Trigger: ACCTCGGGGAGATTGGCACCAAGACCACTCTGAGGT...CGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTCCGAATACCTCAGAGTaGTCTTGGTGCCAATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: IIYKETVTLQSMLEASPCPNTSE*SWCQSP Trigger: GGGAGATTGGCACCAAGACCACTCTGAGGTATTCGG...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR TCA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTTACTGCCCAGCTCCTaGGCAATAGCAAGGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PPWRFDNLQRNCNTAKHALLPSS*AIARAK Trigger: CTTGGCCCTTGCTATTGCTCAGGAGCTGGGCAGTAA...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR TCA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTGGTTGGATGCAAAGATaGCAATGGGGGCGATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PPWRFDNLQRNCNTAKHAGWMQR*QWGRWR Trigger: CCTCCATCGCCCCCATTGTCATCTTTGCATCCAACC...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | GGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGGTGTCACACCTGCCTTaGCTCTTCACAGCTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: GGLIIYKETVTLQSMLEAVSHLP*LFTAPL Trigger: TAGTGGAGCTGTGAAGAGGCAAGGCAGGTGTGACAC...CGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGCTGGGGTCAGCAGCTaGACCGAATACCTCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: HHGGLIIYKETVTLQSMLAGVSS*TEYLRV Trigger: CACTCTGAGGTATTCGGTGCAGCTGCTGACCCCAGC...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | GGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGGCCACATCCAGGTCATaGAAGGTCACATCCTGTATG | + |
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Preference number: 4 (lower is better) Translates to: GGLIIYKETVTLQSMLEAATSRS*KVTSCM Trigger: CATACAGGATGTGACCTTGCATGACCTGGATGTGGC...CGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCGTTGCCTCGGTTGGATaGAAAGATGACAATGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PNHHGGLIIYKETVTLQSVASVG*KDDNGG Trigger: GCCCCCATTGTCATCTTTGCATCCAACCGAGGCAAC...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | GGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGCTGATCTCTTCCACGTaGTCCTTCTCAATGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GGLIIYKETVTLQSMLEALISST*SFSMLS Trigger: GGACAGCATTGAGAAGGAGCACGTGGAAGAGATCAG...CGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTCAACGGGATGCCGTGTaGAGAAGTGATGTCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: PPWRFDNLQRNCNTAKHAQRDAV*RSDVLS Trigger: ACTGAGGACATCACTTCTCCACACGGCATCCCGTTG...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGCTGCGTCTTCGTGGTaGTCTTCACCTCCTCAATCT | + |
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Preference number: 4 (lower is better) Translates to: HHGGLIIYKETVTLQSMLAASSW*SSPPQS Trigger: AGATTGAGGAGGTGAAGAGCACCACGAAGACGCAGC...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTTTATCCGCAACCCAATaGCCCTGCGGAAGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HHGGLIIYKETVTLQSMLLSATQ*PCGSSP Trigger: TGGAGAACTTCCGCAGGGCCATTGGGTTGCGGATAA...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTAGCTCGGCCACACCCTaGTCAATGTATTTGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: PPWRFDNLQRNCNTAKHASSATP*SMYLFT Trigger: GGTGAACAAATACATTGACCAGGGTGTGGCCGAGCT...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCGGTCAGCCAAAATCTTaGCAGAGGACTTGGCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PNHHGGLIIYKETVTLQSGQPKS*QRTWRH Trigger: ATGACGCCAAGTCCTCTGCCAAGATTTTGGCTGACC...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR TCA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTTGTTCACCACTTTGTTaGTCTCCCCTCGAAGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: IIYKETVTLQSMLEASPCCSPLC*SPLEVY Trigger: ATAAACTTCGAGGGGAGATCAACAAAGTGGTGAACA...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR TCA 90 bp | AAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATTGCTGTCCTTGCCATTaGTCTTTGCCAGCAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: KPPWRFDNLQRNCNTAKHCCPCH*SLPAGW Trigger: CCAACCTGCTGGCAAAGATCAATGGCAAGGACAGCA...ATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCCGGATCTTAATGATCTaGTTCATCTCCTGTGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: PNHHGGLIIYKETVTLQSRILMI*FISCGV Trigger: CACGCCACAGGAGATGAAGCAGATCATTAAGATCCG...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTTTCATGTACTTGTCCTaGTGGTCAGCCAAAATCTTG | + |
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Preference number: 4 (lower is better) Translates to: IIYKETVTLQSMLEASPCFMYLS*WSAKIL Trigger: CAAGATTTTGGCTGACCAGCAGGACAAGTACATGAA...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | GGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCTCGATATCCAGCATGTaGACCTCATCGACAAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GLIIYKETVTLQSMLEASSISSM*TSSTKS Trigger: GCTTTTTGTCGATGAGGTCCACATGCTGGATATCGA...GCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTTTTGGCTTCATCAACTaGCCCATCATAGACAGAATA | + |
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Preference number: 4 (lower is better) Translates to: IIYKETVTLQSMLEASPCFGFIN*PIIDRI Trigger: TATTCTGTCTATGATGGGCCAGTTGATGAAGCCAAA...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | GGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCAACTTTCAAAAATACTaGGGTCCAGCTTCAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GLIIYKETVTLQSMLEASNFQKY*GPASAV Trigger: AACAGCTGAAGCTGGACCCCAGTATTTTTGAAAGTT...GCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTATTTCCTTCTTCTTGTaGACATCTCCCTTTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PPWRFDNLQRNCNTAKHAISFFL*TSPFGK Trigger: TTTGCCAAAGGGAGATGTGCACAAGAAGAAGGAAAT...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CCA 90 bp | AAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATAGCCCTATGATCACATaGCTGATAGTTTTGCCGTAC | + |
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Preference number: 4 (lower is better) Translates to: KPPWRFDNLQRNCNTAKHSPMIT*LIVLPY Trigger: GTACGGCAAAACTATCAGCCATGTGATCATAGGGCT...ATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR GCA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTCACAGCTCCACTATTTaGTTCAATGTAAATCACATC | + |
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Preference number: 4 (lower is better) Translates to: HHGGLIIYKETVTLQSMLHSSTI*FNVNHI Trigger: GATGTGATTTACATTGAAGCAAATAGTGGAGCTGTG...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS GCA 90 bp | CATGCCTCTCTCGCGTTCTCCTGGCCCACGAGACCCGAAGCCGCCTaGTTGGCTAGGCCGCTCTCGTCCAGCCCCAGACCCTTCACGTGG | + |
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Preference number: 5 (lower is better) Translates to: HASLAFSWPTRPEAA*LARPLSSSPRPFTW Trigger: CCACGTGAAGGGTCTGGGGCTGGACGAGAGCGGCCTAGCCAAGCAGGCGGCTTCGGGTCTCGTGGGCCAGGAGAACGCGAGAGAGGCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CCA 90 bp | CCTCTCTCGCGTTCTCCTGGCCCACGAGACCCGAAGCCGCCTGCTTaGCTAGGCCGCTCTCGTCCAGCCCCAGACCCTTCACGTGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PLSRSPGPRDPKPPA*LGRSRPAPDPSRGC Trigger: ACAGCCACGTGAAGGGTCTGGGGCTGGACGAGAGCGGCCTAGCCAAGCAGGCGGCTTCGGGTCTCGTGGGCCAGGAGAACGCGAGAGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CCA 90 bp | GCCTGCTTGGCTAGGCCGCTCTCGTCCAGCCCCAGACCCTTCACGTaGCTGTGGGAGGCGATGCGCTGCGTCTTCGTGGTGCTCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ACLARPLSSSPRPFT*LWEAMRCVFVVLFT Trigger: GGTGAAGAGCACCACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAGGGTCTGGGGCTGGACGAGAGCGGCCTAGCCAAGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 90 bp | TTGGCTAGGCCGCTCTCGTCCAGCCCCAGACCCTTCACGTGGCTGTaGGAGGCGATGCGCTGCGTCTTCGTGGTGCTCTTCACCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LARPLSSSPRPFTWL*EAMRCVFVVLFTSS Trigger: TGAGGAGGTGAAGAGCACCACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAGGGTCTGGGGCTGGACGAGAGCGGCCTAGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 90 bp | TGCACCGAATACCTCAGAGTGGTCTTGGTGCCAATCTCCCCGAGGTaGTTCAGCGCCTCCTCGCTGATGTTGATGCCTTCCGTCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CTEYLRVVLVPISPR*FSASSLMLMPSVWA Trigger: AGCCCAGACGGAAGGCATCAACATCAGCGAGGAGGCGCTGAACCACCTCGGGGAGATTGGCACCAAGACCACTCTGAGGTATTCGGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS GCA 90 bp | CTCTTCCACGTGCTCCTTCTCAATGCTGTCCTTGCCATTGATCTTTaGCAGCAGGTTGGCTGGGGTCAGCAGCTGCACCGAATACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFHVLLLNAVLAIDL*QQVGWGQQLHRIPQ Trigger: CTGAGGTATTCGGTGCAGCTGCTGACCCCAGCCAACCTGCTGGCAAAGATCAATGGCAAGGACAGCATTGAGAAGGAGCACGTGGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 90 bp | CTTCTCAATGCTGTCCTTGCCATTGATCTTTGCCAGCAGGTTGGCTaGGGTCAGCAGCTGCACCGAATACCTCAGAGTGGTCTTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLNAVLAIDLCQQVG*GQQLHRIPQSGLGA Trigger: GGCACCAAGACCACTCTGAGGTATTCGGTGCAGCTGCTGACCCCAGCCAACCTGCTGGCAAAGATCAATGGCAAGGACAGCATTGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 90 bp | CCTTTGGCAAAGGGACGTACTCTTCAGCTTCAAGGTCAAACTCTGTaGCATAGGTGTCACACCTGCCTTGCCTCTTCACAGCTCCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: PLAKGRTLQLQGQTL*HRCHTCLASSQLHY Trigger: ATAGTGGAGCTGTGAAGAGGCAAGGCAGGTGTGACACCTATGCCACAGAGTTTGACCTTGAAGCTGAAGAGTACGTCCCTTTGCCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS-3UTR CAA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTCCCGAAGCCGCCTGCTaGGCTAGGCCGCTCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HHGGLIIYKETVTLQSMLPEAAC*ARPLSS Trigger: GGACGAGAGCGGCCTAGCCAAGCAGGCGGCTTCGGG...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS TCA 90 bp | CCTGCGGAAGTTCTCCATCAGCACCTCTGTCTTTTTGATCTCAGTTaGGTATACCTCGCTACCCACCATCGGGCAGAAAGGGACTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: PAEVLHQHLCLFDLS*VYLATHHRAERDFT Trigger: AGTAAAGTCCCTTTCTGCCCGATGGTGGGTAGCGAGGTATACTCAACTGAGATCAAAAAGACAGAGGTGCTGATGGAGAACTTCCGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032165.16 ENSMUST00000129035.2 |
||
| CDS GCA 90 bp | TCGCTGATGTTGATGCCTTCCGTCTGGGCTCGGATCTTAATGATCTaGTTCATCTCCTGTGGCGTGTATAGCATGGTCCTGATGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: SLMLMPSVWARILMI*FISCGVYSMVLMII Trigger: GATGATCATCAGGACCATGCTATACACGCCACAGGAGATGAAGCAGATCATTAAGATCCGAGCCCAGACGGAAGGCATCAACATCAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS-3UTR CAA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCAGGGCCAAGGCTGTCTaGCCAGTTCCAGGAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PNHHGGLIIYKETVTLQSRAKAV*PVPGGP Trigger: GGGGCCTCCTGGAACTGGCAAGACAGCCTTGGCCCT...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS-3UTR CAA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTGCCTCCTCGCTGATGTaGATGCCTTCCGTCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IIYKETVTLQSMLEASPCASSLM*MPSVWA Trigger: AGCCCAGACGGAAGGCATCAACATCAGCGAGGAGGC...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 90 bp | TTCAGCTGTTTGGTTCCTTTAGCAGTCTTGAGCCCTATGATCACATaGCTGATAGTTTTGCCGTACCCACCCATGGGGTTCTCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSCLVPLAVLSPMIT*LIVLPYPPMGFSVS Trigger: TGAGACAGAGAACCCCATGGGTGGGTACGGCAAAACTATCAGCCATGTGATCATAGGGCTCAAGACTGCTAAAGGAACCAAACAGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032165.16 ENSMUST00000129035.2 |
||
| CDS-3UTR CAA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTGGTGTCACACCTGCCTaGCCTCTTCACAGCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: IIYKETVTLQSMLEASPCGVTPA*PLHSST Trigger: AGTGGAGCTGTGAAGAGGCAAGGCAGGTGTGACACC...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS GCA 90 bp | TCCAGGTCATGCAAGGTCACATCCTGTATGATTTCCTTCTTCTTGTaGACATCTCCCTTTGGCAAAGGGACGTACTCTTCAGCTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSCKVTSCMISFFL*TSPFGKGTYSSASR Trigger: CCTTGAAGCTGAAGAGTACGTCCCTTTGCCAAAGGGAGATGTGCACAAGAAGAAGGAAATCATACAGGATGTGACCTTGCATGACCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 90 bp | GGTCACATCCTGTATGATTTCCTTCTTCTTGTGCACATCTCCCTTTaGCAAAGGGACGTACTCTTCAGCTTCAAGGTCAAACTCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GHILYDFLLLVHISL*QRDVLFSFKVKLCG Trigger: GCCACAGAGTTTGACCTTGAAGCTGAAGAGTACGTCCCTTTGCCAAAGGGAGATGTGCACAAGAAGAAGGAAATCATACAGGATGTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | GGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCTACCTCAGAGTGGTCTaGGTGCCAATCTCCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLIIYKETVTLQSMLEASYLRVV*VPISPR Trigger: CCTCGGGGAGATTGGCACCAAGACCACTCTGAGGTA...GCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS-3UTR CAA 90 bp | ATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCCCCTGTTGGTCAGCCAAAATCTaGGCAGAGGACTTGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IIYKETVTLQSMLEASPCWSAKI*AEDLAS Trigger: TGACGCCAAGTCCTCTGCCAAGATTTTGGCTGACCA...ACAGGGGCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS-3UTR CAA 90 bp | GGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGGTTCCTTTAGCAGTCTaGAGCCCTATGATCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: GGLIIYKETVTLQSMLEAVPLAV*SPMITW Trigger: CCATGTGATCATAGGGCTCAAGACTGCTAAAGGAAC...CGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | GGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCACACAGTTGCCTCGGTaGGATGCAAAGATGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GLIIYKETVTLQSMLEASTQLPR*DAKMTM Trigger: CATTGTCATCTTTGCATCCAACCGAGGCAACTGTGT...GCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS-3UTR CAA 90 bp | AAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATCCCCTGATGACACAGTaGCCTCGGTTGGATGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KPPWRFDNLQRNCNTAKHPLMTQ*PRLDAK Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGGGG...ATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | GGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGAGCATGATTTCCTTCTTCTaGTGCACATCTCCCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLIIYKETVTLQSMLEASMISFF*CTSPFG Trigger: GCCAAAGGGAGATGTGCACAAGAAGAAGGAAATCAT...GCTCGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS-3UTR CAA 90 bp | CCAAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCTTCTCAATGCTGTCCTaGCCATTGATCTTTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PNHHGGLIIYKETVTLQSFSMLS*PLIFAS Trigger: GCTGGCAAAGATCAATGGCAAGGACAGCATTGAGAA...GCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS-3UTR CAA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTTCCAGCTTCAGCTGTTaGGTTCCTTTAGCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HHGGLIIYKETVTLQSMLSSFSC*VPLAVL Trigger: CAAGACTGCTAAAGGAACCAAACAGCTGAAGCTGGA...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | GGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTGAGGCGTTGTTCACCACTTTGTaGATCTCCCCTCGAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GGLIIYKETVTLQSMLEALFTTL*ISPRSL Trigger: TAAACTTCGAGGGGAGATCAACAAAGTGGTGAACAA...CGCCTCAAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | AAACCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATATGCTGTCCTTGCCATaGATCTTTGCCAGCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KPPWRFDNLQRNCNTAKHMLSLP*IFASRL Trigger: CAACCTGCTGGCAAAGATCAATGGCAAGGACAGCAT...ATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | CCACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTATTTGTTCACCACTTaGTTGATCTCCCCTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPWRFDNLQRNCNTAKHAYLFTT*LISPRS Trigger: ACTTCGAGGGGAGATCAACAAAGTGGTGAACAAATA...AGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTAGCACCTCTGTCTTTTaGATCTCAGTTGAGTATACC | + |
|
Preference number: 5 (lower is better) Translates to: HHGGLIIYKETVTLQSMLSTSVF*ISVEYT Trigger: GGTATACTCAACTGAGATCAAAAAGACAGAGGTGCT...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTCCCTGGTCAATGTATTaGTTCACCACTTTGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: HHGGLIIYKETVTLQSMLPWSMY*FTTLLI Trigger: GATCAACAAAGTGGTGAACAAATACATTGACCAGGG...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS-3UTR CAA 90 bp | CACCATGGAGGTTTGATAATTTACAAAGAAACTGTAACACTGCAAAGCATGCTTTCACAGCTCCACTATTaGCTTCAATGTAAATCACAT | + |
|
Preference number: 5 (lower is better) Translates to: HHGGLIIYKETVTLQSMLSQLHY*LQCKSH Trigger: ATGTGATTTACATTGAAGCAAATAGTGGAGCTGTGA...AAGCATGCTTTGCAGTGTTACAGTTTCTTTGTAAATTATCAAACCTCCATGGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS GCA 72 bp | CTCGCGTTCTCCTGGCCCACGAGACCCGAAGCCGCCTaGTTGGCTAGGCCGCTCTCGTCCAGCCCCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LAFSWPTRPEAA*LARPLSSSPRP Trigger: GGGTCTGGGGCTGGACGAGAGCGGCCTAGCCAAGCAGGCGGCTTCGGGTCTCGTGGGCCAGGAGAACGCGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CAA 90 bp | GCCTCTCTCGCGTTCTCCTGGCCCACGAGACCCGAAGCCGCCTGCTaGGCTAGGCCGCTCTCGTCCAGCCCCAGACCCTTCACGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASLAFSWPTRPEAAC*ARPLSSSPRPFTWL Trigger: CAGCCACGTGAAGGGTCTGGGGCTGGACGAGAGCGGCCTAGCCAAGCAGGCGGCTTCGGGTCTCGTGGGCCAGGAGAACGCGAGAGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CAA 72 bp | GCGTTCTCCTGGCCCACGAGACCCGAAGCCGCCTGCTaGGCTAGGCCGCTCTCGTCCAGCCCCAGACCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AFSWPTRPEAAC*ARPLSSSPRPF Trigger: GAAGGGTCTGGGGCTGGACGAGAGCGGCCTAGCCAAGCAGGCGGCTTCGGGTCTCGTGGGCCAGGAGAACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 72 bp | GCTAGGCCGCTCTCGTCCAGCCCCAGACCCTTCACGTaGCTGTGGGAGGCGATGCGCTGCGTCTTCGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ARPLSSSPRPFT*LWEAMRCVFVV Trigger: CACCACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAGGGTCTGGGGCTGGACGAGAGCGGCCTAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 72 bp | CGTTCTCCTGGCCCACGAGACCCGAAGCCGCCTGCTTaGCTAGGCCGCTCTCGTCCAGCCCCAGACCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSPGPRDPKPPA*LGRSRPAPDPS Trigger: TGAAGGGTCTGGGGCTGGACGAGAGCGGCCTAGCCAAGCAGGCGGCTTCGGGTCTCGTGGGCCAGGAGAACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS GCA 72 bp | CCAGCCCCAGACCCTTCACGTGGCTGTGGGAGGCGATaGGCTGCGTCTTCGTGGTGCTCTTCACCTCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PAPDPSRGCGRR*AASSWCSSPPQ Trigger: TTGAGGAGGTGAAGAGCACCACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAGGGTCTGGGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CCA 72 bp | TCTACAATGACGCCACATGCCTCTCTCGCGTTCTCCTaGCCCACGAGACCCGAAGCCGCCTGCTTGGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: STMTPHASLAFS*PTRPEAACLAR Trigger: CCTAGCCAAGCAGGCGGCTTCGGGTCTCGTGGGCCAGGAGAACGCGAGAGAGGCATGTGGCGTCATTGTAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS GCA 72 bp | CCCAGACCCTTCACGTGGCTGTGGGAGGCGATGCGCTaGGTCTTCGTGGTGCTCTTCACCTCCTCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PRPFTWLWEAMR*VFVVLFTSSIF Trigger: GAAGATTGAGGAGGTGAAGAGCACCACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAGGGTCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 72 bp | TACCTCAGAGTGGTCTTGGTGCCAATCTCCCCGAGGTaGTTCAGCGCCTCCTCGCTGATGTTGATGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: YLRVVLVPISPR*FSASSLMLMPS Trigger: GGAAGGCATCAACATCAGCGAGGAGGCGCTGAACCACCTCGGGGAGATTGGCACCAAGACCACTCTGAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 90 bp | GGAGAAGTGATGTCCTCAGTGCCCCTGATGACACAGTTGCCTCGGTaGGATGCAAAGATGACAATGGGGGCGATGGAGGACTCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GEVMSSVPLMTQLPR*DAKMTMGAMEDSRA Trigger: AGCCCTGGAGTCCTCCATCGCCCCCATTGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGGGGCACTGAGGACATCACTTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CCA 72 bp | GCTGTCCTTGCCATTGATCTTTGCCAGCAGGTTGGCTaGGGTCAGCAGCTGCACCGAATACCTCAGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AVLAIDLCQQVG*GQQLHRIPQSG Trigger: ACCACTCTGAGGTATTCGGTGCAGCTGCTGACCCCAGCCAACCTGCTGGCAAAGATCAATGGCAAGGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 90 bp | TTGGTGCCAATCTCCCCGAGGTGGTTCAGCGCCTCCTCGCTGATGTaGATGCCTTCCGTCTGGGCTCGGATCTTAATGATCTGCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LVPISPRWFSASSLM*MPSVWARILMICFI Trigger: GATGAAGCAGATCATTAAGATCCGAGCCCAGACGGAAGGCATCAACATCAGCGAGGAGGCGCTGAACCACCTCGGGGAGATTGGCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 90 bp | TCGCTGATCTCTTCCACGTGCTCCTTCTCAATGCTGTCCTTGCCATaGATCTTTGCCAGCAGGTTGGCTGGGGTCAGCAGCTGCACCGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLISSTCSFSMLSLP*IFASRLAGVSSCTE Trigger: TTCGGTGCAGCTGCTGACCCCAGCCAACCTGCTGGCAAAGATCAATGGCAAGGACAGCATTGAGAAGGAGCACGTGGAAGAGATCAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 90 bp | AAGAGCTCGCTGATCTCTTCCACGTGCTCCTTCTCAATGCTGTCCTaGCCATTGATCTTTGCCAGCAGGTTGGCTGGGGTCAGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KSSLISSTCSFSMLS*PLIFASRLAGVSSC Trigger: GCAGCTGCTGACCCCAGCCAACCTGCTGGCAAAGATCAATGGCAAGGACAGCATTGAGAAGGAGCACGTGGAAGAGATCAGCGAGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 72 bp | ATGTCCTCAGTGCCCCTGATGACACAGTTGCCTCGGTaGGATGCAAAGATGACAATGGGGGCGATGGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MSSVPLMTQLPR*DAKMTMGAMED Trigger: GTCCTCCATCGCCCCCATTGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGGGGCACTGAGGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 72 bp | GGAGAAGTGATGTCCTCAGTGCCCCTGATGACACAGTaGCCTCGGTTGGATGCAAAGATGACAATGGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GEVMSSVPLMTQ*PRLDAKMTMGA Trigger: CGCCCCCATTGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGGGGCACTGAGGACATCACTTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 90 bp | TGCTCCTTCTCAATGCTGTCCTTGCCATTGATCTTTGCCAGCAGGTaGGCTGGGGTCAGCAGCTGCACCGAATACCTCAGAGTGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSFSMLSLPLIFASR*AGVSSCTEYLRVVL Trigger: CAAGACCACTCTGAGGTATTCGGTGCAGCTGCTGACCCCAGCCAACCTGCTGGCAAAGATCAATGGCAAGGACAGCATTGAGAAGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 72 bp | CTGATCTCTTCCACGTGCTCCTTCTCAATGCTGTCCTaGCCATTGATCTTTGCCAGCAGGTTGGCTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LISSTCSFSMLS*PLIFASRLAGV Trigger: GACCCCAGCCAACCTGCTGGCAAAGATCAATGGCAAGGACAGCATTGAGAAGGAGCACGTGGAAGAGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
||
| CDS CAA 72 bp | GCAGTCTTGAGCCCTATGATCACATGGCTGATAGTTTaGCCGTACCCACCCATGGGGTTCTCTGTCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: AVLSPMITWLIV*PYPPMGFSVSQ Trigger: CTGTGAGACAGAGAACCCCATGGGTGGGTACGGCAAAACTATCAGCCATGTGATCATAGGGCTCAAGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032165.16 ENSMUST00000129035.2 |
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| CDS CAA 90 bp | GTTCCTTTAGCAGTCTTGAGCCCTATGATCACATGGCTGATAGTTTaGCCGTACCCACCCATGGGGTTCTCTGTCTCACAGGGAGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VPLAVLSPMITWLIV*PYPPMGFSVSQGVS Trigger: GCTCACTCCCTGTGAGACAGAGAACCCCATGGGTGGGTACGGCAAAACTATCAGCCATGTGATCATAGGGCTCAAGACTGCTAAAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032165.16 ENSMUST00000129035.2 |
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| CDS CAA 90 bp | AACCCAATGGCCCTGCGGAAGTTCTCCATCAGCACCTCTGTCTTTTaGATCTCAGTTGAGTATACCTCGCTACCCACCATCGGGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: NPMALRKFSISTSVF*ISVEYTSLPTIGQK Trigger: TTTCTGCCCGATGGTGGGTAGCGAGGTATACTCAACTGAGATCAAAAAGACAGAGGTGCTGATGGAGAACTTCCGCAGGGCCATTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032165.16 ENSMUST00000129035.2 |
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| CDS CCA 72 bp | AAGGGACGTACTCTTCAGCTTCAAGGTCAAACTCTGTaGCATAGGTGTCACACCTGCCTTGCCTCTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: KGRTLQLQGQTL*HRCHTCLASSQ Trigger: CTGTGAAGAGGCAAGGCAGGTGTGACACCTATGCCACAGAGTTTGACCTTGAAGCTGAAGAGTACGTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CAA 72 bp | GCCCTGCGGAAGTTCTCCATCAGCACCTCTGTCTTTTaGATCTCAGTTGAGTATACCTCGCTACCCACCATC | + |
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Preference number: 6 (lower is better) Translates to: ALRKFSISTSVF*ISVEYTSLPTI Trigger: GATGGTGGGTAGCGAGGTATACTCAACTGAGATCAAAAAGACAGAGGTGCTGATGGAGAACTTCCGCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032165.16 ENSMUST00000129035.2 |
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| CDS CAA 72 bp | CCAGGGACCAGCTCGGCCACACCCTGGTCAATGTATTaGTTCACCACTTTGTTGATCTCCCCTCGAAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PGTSSATPWSMY*FTTLLISPRSL Trigger: TAAACTTCGAGGGGAGATCAACAAAGTGGTGAACAAATACATTGACCAGGGTGTGGCCGAGCTGGTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS TCA 72 bp | GTTCTCCATCAGCACCTCTGTCTTTTTGATCTCAGTTaGGTATACCTCGCTACCCACCATCGGGCAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VLHQHLCLFDLS*VYLATHHRAER Trigger: CCTTTCTGCCCGATGGTGGGTAGCGAGGTATACTCAACTGAGATCAAAAAGACAGAGGTGCTGATGGAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032165.16 ENSMUST00000129035.2 |
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| CDS CAA 72 bp | GGGTCCAGCTTCAGCTGTTTGGTTCCTTTAGCAGTCTaGAGCCCTATGATCACATGGCTGATAGTTTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: GSSFSCLVPLAV*SPMITWLIVLP Trigger: CGGCAAAACTATCAGCCATGTGATCATAGGGCTCAAGACTGCTAAAGGAACCAAACAGCTGAAGCTGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032165.16 ENSMUST00000129035.2 |
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| CDS CAA 90 bp | AAAAGCACTCCAGGGACCAGCTCGGCCACACCCTGGTCAATGTATTaGTTCACCACTTTGTTGATCTCCCCTCGAAGTTTATCTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: KSTPGTSSATPWSMY*FTTLLISPRSLSVI Trigger: GATCACAGATAAACTTCGAGGGGAGATCAACAAAGTGGTGAACAAATACATTGACCAGGGTGTGGCCGAGCTGGTCCCTGGAGTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CAA 72 bp | TGTCACACCTGCCTTGCCTCTTCACAGCTCCACTATTaGCTTCAATGTAAATCACATCTCCAGCCTCTACTC | + |
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Preference number: 6 (lower is better) Translates to: CHTCLASSQLHY*LQCKSHLQPLL Trigger: GAGTAGAGGCTGGAGATGTGATTTACATTGAAGCAAATAGTGGAGCTGTGAAGAGGCAAGGCAGGTGTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CAA 72 bp | GCCACACCCTGGTCAATGTATTTGTTCACCACTTTGTaGATCTCCCCTCGAAGTTTATCTGTGATCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ATPWSMYLFTTL*ISPRSLSVISV Trigger: GACAGAGATCACAGATAAACTTCGAGGGGAGATCAACAAAGTGGTGAACAAATACATTGACCAGGGTGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CAA 72 bp | TCGGCCACACCCTGGTCAATGTATTTGTTCACCACTTaGTTGATCTCCCCTCGAAGTTTATCTGTGATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SATPWSMYLFTT*LISPRSLSVIS Trigger: AGAGATCACAGATAAACTTCGAGGGGAGATCAACAAAGTGGTGAACAAATACATTGACCAGGGTGTGGCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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| CDS CCA 72 bp | CTGTATGATTTCCTTCTTCTTGTGCACATCTCCCTTTaGCAAAGGGACGTACTCTTCAGCTTCAAGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LYDFLLLVHISL*QRDVLFSFKVK Trigger: TTTGACCTTGAAGCTGAAGAGTACGTCCCTTTGCCAAAGGGAGATGTGCACAAGAAGAAGGAAATCATACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032165.16 |
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