Pregenerated sensors for RUSF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030780Ensembl transcript IDs: ENSMUST00000033044.16, ENSMUST00000126263.8, ENSMUST00000137677.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATaGGCAAGAGTGGGTCAGGGAGTCCTCCGCCCACTACCGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RLQACSAGACFGSVG*ARVGQGVLRPLPRR Trigger: CCTCCTCGGTAGTGGGCGGAGGACTCCCTGACCCACTCTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR GCA 90 bp | TTCCTTCCAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTaGCTGCTTTGGTTCTGTGGGATGAGCAAGAGTGGGTCAGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: FLPEVQSPAPGLLRR*LLWFCGMSKSGSGS Trigger: ACTCCCTGACCCACTCTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTGGACCTCTGGAAGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR TCA 90 bp | TACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTaGGGATCCCCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACT | + |
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Preference number: 1 (lower is better) Translates to: YRGGGGNHQAAGGHQ*GSPLGTSSQPQCPT Trigger: AGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR CCA 90 bp | GAAGTGGCCCATCTTCCTGCAGGGCTCCGAGAATCAGCCCATGGGTaGCAGCCCTTAAGACAGTCTCGGGGCCTGCTTCTTGGCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: EVAHLPAGLRESAHG*QPLRQSRGLLLGSG Trigger: CCCTGAGCCAAGAAGCAGGCCCCGAGACTGTCTTAAGGGCTGCCACCCATGGGCTGATTCTCGGAGCCCTGCAGGAAGATGGGCCACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR GCA 90 bp | CCAGCTTTCTTTCTTAGGATCAGCCTGCACCTGGTGCCTCAGCTGTaGCAGCTCTCCCGGAAGTGGCCCATCTTCCTGCAGGGCTCCGAG | + |
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Preference number: 1 (lower is better) Translates to: PAFFLRISLHLVPQL*QLSRKWPIFLQGSE Trigger: CTCGGAGCCCTGCAGGAAGATGGGCCACTTCCGGGAGAGCTGGCACAGCTGAGGCACCAGGTGCAGGCTGATCCTAAGAAAGAAAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR CCA 90 bp | GCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGATCCCCGCTaGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTG | + |
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Preference number: 1 (lower is better) Translates to: AATTRRLEDISEDPR*ARVVNLNALLMMTV Trigger: CACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR CCA 90 bp | TCCCTGACAAGAATCCAGCTTTCTTTCTTAGGATCAGCCTGCACCTaGTGCCTCAGCTGTGCCAGCTCTCCCGGAAGTGGCCCATCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SLTRIQLSFLGSACT*CLSCASSPGSGPSS Trigger: GGAAGATGGGCCACTTCCGGGAGAGCTGGCACAGCTGAGGCACCAGGTGCAGGCTGATCCTAAGAAAGAAAGCTGGATTCTTGTCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR CCA 90 bp | TCTGGAGACAAGGGCCATGTGGCCCTCCACTCATCCACCTCTAGATaGTGTTTCTCCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: SGDKGHVALHSSTSR*CFSVFQPAACSPFK Trigger: CTTGAAAGGACTGCAGGCTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR CCA 90 bp | TTGCTCTCGGCTTCATCCTGGTCTCTGGGCTCCTGTTCTGGGTCCTaGGCTTGGAGCACGGCTGCTCATAAGACCTTCTTTTCTGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LLSASSWSLGSCSGS*AWSTAAHKTFFSGD Trigger: GTCTCCAGAAAAGAAGGTCTTATGAGCAGCCGTGCTCCAAGCCCAGGACCCAGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR GCA 90 bp | TGCCCTACTCATGATGACCGTGGCTGTGTTCCTCTGGGGCTTCTATaGATAAAGTCGAGGGTGTTGGATGCCATGAGCTACAACCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: CPTHDDRGCVPLGLL*IKSRVLDAMSYNQA Trigger: GGCCTGGTTGTAGCTCATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACGGTCATCATGAGTAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR CCA 90 bp | GCACGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGTaGCCCTCCACTCATCCACCTCTAGATGGTGTTTCTCCGTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ARLLIRPSFLETRAM*PSTHPPLDGVSPSS Trigger: GGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR CCA 90 bp | GGCCATGTTGGACCCTCACAAAGAGTAAGGGTGAGCAGCTTGGAGTaGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: GHVGPSQRVRVSSLE*IPEKEQGKNTAGRN Trigger: GTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGAGGGTCCAACATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR GCA 90 bp | CTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATaGCATGAGCTACAACCAGGCCATGTTGGACCCTCACAAAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: LCSSGASMHKVEGVG*HELQPGHVGPSQRV Trigger: TACTCTTTGTGAGGGTCCAACATGGCCTGGTTGTAGCTCATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR TCA 90 bp | TGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTGGCTaGAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: CLYKNKTALLTSCCG*NIVALGFILVSGLL Trigger: CAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTCAGCCACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| 3UTR TCA 90 bp | GCCTGCAGTCCTTTCAAGAACTTTGGGAACAGTGTGTCCAACACTTaGTGGGTCTCCCTGACAAGAATCCAGCTTTCTTTCTTAGGATCA | + |
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Preference number: 1 (lower is better) Translates to: ACSPFKNFGNSVSNT*WVSLTRIQLSFLGS Trigger: TGATCCTAAGAAAGAAAGCTGGATTCTTGTCAGGGAGACCCATCAAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR TCA 90 bp | TTGGGAAGCAGAGCAAATGACAATAGGAATATGAAGTATCAGAACTaGAGAACTATGATTCTCGGTGTAGACCTAAAACTTGGGGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LGSRANDNRNMKYQN*RTMILGVDLKLGVK Trigger: TTTCACCCCAAGTTTTAGGTCTACACCGAGAATCATAGTTCTTCAGTTCTGATACTTCATATTCCTATTGTCATTTGCTCTGCTTCCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTCTGGGCTCCTGTTCTaGGTCCTGGGCTTGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RGPVPGSRPAPPVPALVLSGLLF*VLGLEH Trigger: GTGCTCCAAGCCCAGGACCCAGAACAGGAGCCCAGA...CAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTGGACCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCATTTGGGATGAGCAAGAGTaGGTCAGGGAGTCCTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: PWGALGANSFQANCVLPIWDEQE*VRESSA Trigger: GGCGGAGGACTCCCTGACCCACTCTTGCTCATCCCA...AATGGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTCCACTCATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGTCTGGGCTCCTGTTCTaGGTCCTGGGCTTGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: WPSTHPPLDGVSPSSSQQSGLLF*VLGLEH Trigger: GTGCTCCAAGCCCAGGACCCAGAACAGGAGCCCAGA...CTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGGCTCCTGTTCTGGGTCCTGGGCTTGGAGCACGGCTGCTCATAAGACCTCTTCATCCTGGTCTCTaGGCTCCTGTTCTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LWAPVLGPGLGARLLIRPLHPGL*APVLGP Trigger: AGGACCCAGAACAGGAGCCCAGAGACCAGGATGAAG...AGGTCTTATGAGCAGCCGTGCTCCAAGCCCAGGACCCAGAACAGGAGCCCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR TCA 90 bp | GTACCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCACATCCTGTTGTGGCTaGAACATCGTTGCTCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: VPWGALGANSFQANCVLPTSCCG*NIVALG Trigger: GCCGAGAGCAACGATGTTTCAGCCACAACAGGATGT...GGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR GCA 90 bp | CCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTCAGACAGTCTCGGGGCCTaGTTCTTGGCTCAGGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: PPLDGVSPSSSQQPAVLSDSLGA*FLAQGN Trigger: GTTGCCCTGAGCCAAGAAGCAGGCCCCGAGACTGTC...TGAAAGGACTGCAGGCTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCACGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGTGGCCACATCCTGTTGTGGCTaGAACATCGTTGCTCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: WSTAAHKTFFSGDKGHVATSCCG*NIVALG Trigger: GCCGAGAGCAACGATGTTTCAGCCACAACAGGATGT...GGCCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCGTGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR TCA 90 bp | CGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTGGGGTCCAGTCCATTTaGTTGGTTGTCACTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RLLIRPSFLETRAMWPSTGVQSI*LVVTSH Trigger: GTGGGAAGTGACAACCAATCAAATGGACTGGACCCC...AGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR GCA 90 bp | CATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTTCTTAGGATCAGCCTaGACCTGGTGCCTCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HPPLDGVSPSSSQQPAVLFLGSA*TWCLSC Trigger: ACAGCTGAGGCACCAGGTGCAGGCTGATCCTAAGAA...AAGGACTGCAGGCTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR CCA 90 bp | TACCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCAACAACCAGGCCATGTTaGACCCTCACAAAGAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: YPGELWELTPSRLTVCSPTTRPC*TLTKSK Trigger: CTTACTCTTTGTGAGGGTCCAACATGGCCTGGTTGT...TGGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTCATCCACCTCTAGATCCGAGAATCAGCCCATaGGTGGCAGCCCTTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: PSFLETRAMWPSTHPPLDPRISP*VAALKT Trigger: TGTCTTAAGGGCTGCCACCCATGGGCTGATTCTCGG...ATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCCTTTCAAGAACTTTGGGAACAGTGTGTCCAACACTTGATGGGTCTCCCTCAGCTCTCCCGGAAGTaGCCCATCTTCCTGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: QSFQELWEQCVQHLMGLPQLSRK*PIFLQG Trigger: GCCCTGCAGGAAGATGGGCCACTTCCGGGAGAGCTG...AGGGAGACCCATCAAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR CAA 90 bp | CGTGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTaGGATGCCATGAGCTACAACCAGGCCATGTTGGACCCTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: RGCVPLGLLCIKSRV*DAMSYNQAMLDPHK Trigger: TTTGTGAGGGTCCAACATGGCCTGGTTGTAGCTCATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCTTTCAAGAACTTTGGGAACAGTGTGTCCAACACTTGATGGGTCTCCCTAGGAGGTACGGTTCGTaGTGGCCCTCAACCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: QSFQELWEQCVQHLMGLPRRYGS*WPSTSC Trigger: GCAGCTGGTTGAGGGCCATCACGAACCGTACCTCCT...AGGGAGACCCATCAAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCACAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGCTTCATCCTGGTCTCTaGGCTCCTGTTCTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PSQRVRVSSLEWIPEKEQLHPGL*APVLGP Trigger: AGGACCCAGAACAGGAGCCCAGAGACCAGGATGAAG...CTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR CAA 90 bp | CAACCAGGCCATGTTGGACCCTCACAAAGAGTAAGGGTGAGCAGCTaGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QPGHVGPSQRVRVSS*EWIPEKEQGKNTAG Trigger: TCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGAGGGTCCAACATGGCCTGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR CAA 90 bp | AGGAAGGAACCGGTTCCCTTCCTCTTTACCCGGGGTCCAGTCCATTaGATTGGTTGTCACTTCCCACAAGATGATGGCCAATTGGTCATA | + |
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Preference number: 2 (lower is better) Translates to: RKEPVPFLFTRGPVH*IGCHFPQDDGQLVI Trigger: TATGACCAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCGGGTAAAGAGGAAGGGAACCGGTTCCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR CCA 90 bp | TTGATGGGTCTCCCTGACAAGAATCCAGCTTTCTTTCTTAGGATCAGCCTGCACGAATCAGCCCATGGGTaGCAGCCCTTAAGACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LMGLPDKNPAFFLRISLHESAHG*QPLRQS Trigger: AGACTGTCTTAAGGGCTGCCACCCATGGGCTGATTC...GTGCAGGCTGATCCTAAGAAAGAAAGCTGGATTCTTGTCAGGGAGACCCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCTCCCTGACAAGAATCCAGCTTTCTTTCTTAGGATCAGCCTGCACCTGGTCCAGTCCATTTGATTaGTTGTCACTTCCCACAAGA | + |
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Preference number: 2 (lower is better) Translates to: WVSLTRIQLSFLGSACTWSSPFD*LSLPTR Trigger: TCTTGTGGGAAGTGACAACCAATCAAATGGACTGGA...CCAGGTGCAGGCTGATCCTAAGAAAGAAAGCTGGATTCTTGTCAGGGAGACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR CAA 90 bp | AGCCTGCAGTCCTTTCAAGAACTTTGGGAACAGTGTGTCCAACACTaGATGGGTCTCCCTGACAAGAATCCAGCTTTCTTTCTTAGGATC | + |
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Preference number: 2 (lower is better) Translates to: SLQSFQELWEQCVQH*MGLPDKNPAFFLRI Trigger: GATCCTAAGAAAGAAAGCTGGATTCTTGTCAGGGAGACCCATCAAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR-3UTR GCA 90 bp | GTATCAGAACTGAAGAACTATGATTCTCGGTGTAGACCTAAAACTTGGGGTGAAAGTGACAAAGCTGTGTaGCAGCATGGACCTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VSELKNYDSRCRPKTWGESDKAV*QHGPGV Trigger: CACCCCAGGTCCATGCTGGCACACAGCTTTGTCACT...TTCACCCCAAGTTTTAGGTCTACACCGAGAATCATAGTTCTTCAGTTCTGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR TCA 90 bp | GTATCAGAACTGAAGAACTATGATTCTCGGTGTAGACCTAAAACTTGGGGTGAATTTGGTTCTGTGGGATaGGCAAGAGTGGGTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: VSELKNYDSRCRPKTWGEFGSVG*ARVGQG Trigger: TCCCTGACCCACTCTTGCTCATCCCACAGAACCAAA...TTCACCCCAAGTTTTAGGTCTACACCGAGAATCATAGTTCTTCAGTTCTGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR CCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTCTCTCGGCTTCATCCTaGTCTCTGGGCTCCTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VIEVCLYKNKTALLTSCCLSASS*SLGSCS Trigger: AGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAG...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| 3UTR CAA 90 bp | CCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATGATGGCCAATaGGTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: PVHLIGCHFPQDDGQ*VIEVCLYKNKTALL Trigger: TAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGACCAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| 3UTR-3UTR CCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTTCCAGTCCATTTGATTaGTTGTCACTTCCCACAAGA | + |
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Preference number: 2 (lower is better) Translates to: VIEVCLYKNKTALLTSCCSSPFD*LSLPTR Trigger: TCTTGTGGGAAGTGACAACCAATCAAATGGACTGGA...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| 3UTR CCA 72 bp | CCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTaGAGGACATCAGTGAGGATCCCCGCTGGGCACGAG | + |
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Preference number: 3 (lower is better) Translates to: PLPRRWRQPPGG*RTSVRIPAGHE Trigger: CTCGTGCCCAGCGGGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR CCA 72 bp | GTGGGTCAGGGAGTCCTCCGCCCACTACCGAGGAGGTaGCGGCAACCACCAGGCGGCTGGAGGACATCAGTG | + |
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Preference number: 3 (lower is better) Translates to: VGQGVLRPLPRR*RQPPGGWRTSV Trigger: CACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGGACTCCCTGACCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR-3UTR CAA 90 bp | CCTGGTGCCTCAGCTGTGCCAGCTCTCCCGGAAGTGGCCCATCTTCCTGCAGGGCTCGGGGCCTGCTTCTaGGCTCAGGGCAACCCGTAC | + |
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Preference number: 3 (lower is better) Translates to: PGASAVPALPEVAHLPAGLGACF*AQGNPY Trigger: GTACGGGTTGCCCTGAGCCAAGAAGCAGGCCCCGAG...CCCTGCAGGAAGATGGGCCACTTCCGGGAGAGCTGGCACAGCTGAGGCACCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR CCA 72 bp | TCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTaGTTCTGTGGGATGAGCAAGAGTGGGTCAGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: SPAPGLLRRCLL*FCGMSKSGSGS Trigger: ACTCCCTGACCCACTCTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| 3UTR CCA 72 bp | CACCTGGTGCCTCAGCTGTGCCAGCTCTCCCGGAAGTaGCCCATCTTCCTGCAGGGCTCCGAGAATCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: HLVPQLCQLSRK*PIFLQGSENQP Trigger: GGGCTGATTCTCGGAGCCCTGCAGGAAGATGGGCCACTTCCGGGAGAGCTGGCACAGCTGAGGCACCAGGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| 3UTR TCA 72 bp | GGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTaGGGATCCCCGCTGGGCACGAGTAGTCAACCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGGNHQAAGGHQ*GSPLGTSSQPQ Trigger: TTGAGGTTGACTACTCGTGCCCAGCGGGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR TCA 72 bp | GCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATaGGCAAGAGTGGGTCAGGGAGTCCTCCGCCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: ACSAGACFGSVG*ARVGQGVLRPL Trigger: TAGTGGGCGGAGGACTCCCTGACCCACTCTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CCA 72 bp | GAGATGGAAGGTAAGGCCGACCCCGGGAGGGTACCCTaGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: EMEGKADPGRVP*GALGANSFQAN Trigger: GTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGGTACCCTCCCGGGGTCGGCCTTACCTTCCATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CCA 72 bp | CTGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATaGAGATGGAAGGTAAGGCCGACCCCGGGAGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LLLCRTGARNVQ*RWKVRPTPGGY Trigger: GTACCCTCCCGGGGTCGGCCTTACCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTGCACAGGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CCA 72 bp | CAGCTCAGAGCACCCTCACCAGCATGTGCTCCAACATaGCCCTGCACAGGCTGGCTGAGGTACAAGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QLRAPSPACAPT*PCTGWLRYKGC Trigger: ACAGCCCTTGTACCTCAGCCAGCCTGTGCAGGGCCATGTTGGAGCACATGCTGGTGAGGGTGCTCTGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCATTCCGCCGGTGCCTGCTTaGGTTCTGTGGGATGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PWGALGANSFQANCVLPIPPVPA*VLWDEQ Trigger: TTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGG...AATGGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR GCA 72 bp | GAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTaGTCCCCATTCCTTCCAGAGGTCCAGTCCCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ELWELTPSRLTV*SPFLPEVQSPA Trigger: AGCCGGGGACTGGACCTCTGGAAGGAATGGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR GCA 72 bp | TTTCTTAGGATCAGCCTGCACCTGGTGCCTCAGCTGTaGCAGCTCTCCCGGAAGTGGCCCATCTTCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLRISLHLVPQL*QLSRKWPIFLQ Trigger: CTGCAGGAAGATGGGCCACTTCCGGGAGAGCTGGCACAGCTGAGGCACCAGGTGCAGGCTGATCCTAAGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| 3UTR CCA 72 bp | CTGAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTaGGCTCCTGTTCTGGGTCCTGGGCTTGGAGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: LKHRCSRLHPGL*APVLGPGLGAR Trigger: CCGTGCTCCAAGCCCAGGACCCAGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| 3UTR CCA 72 bp | ACCAGGCGGCTGGAGGACATCAGTGAGGATCCCCGCTaGGCACGAGTAGTCAACCTCAATGCCCTACTCATG | + |
|
Preference number: 3 (lower is better) Translates to: TRRLEDISEDPR*ARVVNLNALLM Trigger: CATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGGATCCTCACTGATGTCCTCCAGCCGCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CCA 72 bp | CATCTTCCTGCAGGGCTCCGAGAATCAGCCCATGGGTaGCAGCCCTTAAGACAGTCTCGGGGCCTGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HLPAGLRESAHG*QPLRQSRGLLL Trigger: AAGAAGCAGGCCCCGAGACTGTCTTAAGGGCTGCCACCCATGGGCTGATTCTCGGAGCCCTGCAGGAAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| 3UTR CCA 72 bp | GTTGTGGCTGAAACATCGTTGCTCTCGGCTTCATCCTaGTCTCTGGGCTCCTGTTCTGGGTCCTGGGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VVAETSLLSASS*SLGSCSGSWAW Trigger: CCAAGCCCAGGACCCAGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTCAGCCACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| 3UTR TCA 72 bp | CAGCATGTGCTCCAACATGGCCCTGCACAGGCTGGCTaGGGTACAAGGGCTGTCTGGTCAGAGGATCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QHVLQHGPAQAG*GTRAVWSEDQK Trigger: TTTCTGATCCTCTGACCAGACAGCCCTTGTACCTCAGCCAGCCTGTGCAGGGCCATGTTGGAGCACATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTAGACAGTGACAAAGCTGTGTaGCAGCATGGACCTGGGGTGACAGCCAGAACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVDSDKAV*QHGPGVTARTP Trigger: GGGAGTTCTGGCTGTCACCCCAGGTCCATGCTGGCACACAGCTTTGTCACTGTCTACACACACACACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR GCA 72 bp | CTGACAAGAATCCAGCTTTCTTTCTTAGGATCAGCCTaGACCTGGTGCCTCAGCTGTGCCAGCTCTCCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LTRIQLSFLGSA*TWCLSCASSPG Trigger: TCCGGGAGAGCTGGCACAGCTGAGGCACCAGGTGCAGGCTGATCCTAAGAAAGAAAGCTGGATTCTTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| 3UTR TCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGACAGTaGCAAAGCTGTGTGCCAGCATGGACCTGGGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCVCRQ*QSCVPAWTWGD Trigger: GTCACCCCAGGTCCATGCTGGCACACAGCTTTGTCACTGTCTACACACACACACACACACACACACACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR GCA 72 bp | TCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATaGCATGAGCTACAACCAGGCCATGTTGGACCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGASMHKVEGVG*HELQPGHVGPS Trigger: TGAGGGTCCAACATGGCCTGGTTGTAGCTCATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CCA 72 bp | CTTCCAGCCAGCAGCCTGCAGTCCTTTCAAGAACTTTaGGAACAGTGTGTCCAACACTTGATGGGTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPASSLQSFQEL*EQCVQHLMGLP Trigger: AGGGAGACCCATCAAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGCTGCTGGCTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| 3UTR CCA 72 bp | CTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGTaGCCCTCCACTCATCCACCTCTAGATGGTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LIRPSFLETRAM*PSTHPPLDGVS Trigger: AGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| 3UTR TCA 72 bp | AAAAATAAAACTGCCCTCCTAACATCCTGTTGTGGCTaGAACATCGTTGCTCTCGGCTTCATCCTGGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KNKTALLTSCCG*NIVALGFILVS Trigger: AGAGACCAGGATGAAGCCGAGAGCAACGATGTTTCAGCCACAACAGGATGTTAGGAGGGCAGTTTTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| 3UTR TCA 72 bp | TCCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATaGTGGCCAATTGGTCATAGAGGTTTGCCTATACAA | + |
|
Preference number: 3 (lower is better) Translates to: SSPFDWLSLPTR*WPIGHRGLPIQ Trigger: TTGTATAGGCAAACCTCTATGACCAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | TCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGCGAGCCCCGTCCCACTaGAGGCTCCCATCGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAHYRGGGGNHQAAGGHQRAPSH*RLPSAA Trigger: TGCCGCCGATGGGAGCCTGCAGTGGGACGGGGCTCG...CTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | TCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATGAGCGGATCAGCCTGCACCTaGTGCCTCAGCTGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPAPGLLRRCLLWFCGMSGSACT*CLSCAS Trigger: GCTGGCACAGCTGAGGCACCAGGTGCAGGCTGATCC...GCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CAA 72 bp | GTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTaGGTTCTGTGGGATGAGCAAGAGTGGGTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGSRPAPPVPA*VLWDEQEWVRE Trigger: CTCCCTGACCCACTCTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR GCA 90 bp | ATGGAAGGTAAGGCCGACCCCGGGAGGGTACCCTGGGGAGCTCTGGGAGCTAACCTGGTGCATGGTCAGTaGAGCTCGAGTGGCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MEGKADPGRVPWGALGANLVHGQ*SSSGPA Trigger: GGCGGGGCCACTCGAGCTGCACTGACCATGCACCAG...GTTAGCTCCCAGAGCTCCCCAGGGTACCCTCCCGGGGTCGGCCTTACCTTCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGGTAAGGCCGACCCCGGGAGGGTACCCTGGGGAGCTCTGGGAGCTAACAGGAGGTACGGTTCGTaGTGGCCCTCAACCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MEGKADPGRVPWGALGANRRYGS*WPSTSC Trigger: GCAGCTGGTTGAGGGCCATCACGAACCGTACCTCCT...GTTAGCTCCCAGAGCTCCCCAGGGTACCCTCCCGGGGTCGGCCTTACCTTCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR GCA 90 bp | AGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGATCCCCGCTGGGTGGCCCTCAACCAGCTaGTTCAGCTCAGAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RWRQPPGGWRTSVRIPAGWPSTS*FSSETL Trigger: CAGTGTCTCTGAGCTGAAGCAGCTGGTTGAGGGCCA...CCCAGCGGGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGCCTCAGCTGTGCCAGCTCTCCCGGAAGTGGCCCATCTTCCTGCAGGGTCCACCAGGCAAAGATaGTACGGCCCAACATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGASAVPALPEVAHLPAGSTRQR*YGPTCQ Trigger: CTGGCATGTTGGGCCGTATCATCTTTGCCTGGTGGA...CCCTGCAGGAAGATGGGCCACTTCCGGGAGAGCTGGCACAGCTGAGGCACCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTCGAGCCCCGTCCCACTaGAGGCTCCCATCGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLIRPSFLETRAMWPSTRAPSH*RLPSAA Trigger: TGCCGCCGATGGGAGCCTGCAGTGGGACGGGGCTCG...AGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | GAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTCCTGTTCTGGGTCCAAGAGCGGTCAGTGCTaGCCAGGGTCCCCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETSLLSASSWSLGSCSGSKSGQC*PGSPAS Trigger: GGAGGCGGGGGACCCTGGGCAGCACTGACCGCTCTT...GGACCCAGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTCCACTGCTTGGCATTaGAGTCCAGTTTGCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPVPGSRPAPPVPALVLSTAWH*SPVCSP Trigger: AGGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGA...CAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTGGACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR GCA 90 bp | TCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATGAGCTTCTTAGGATCAGCCTaGACCTGGTGCCTCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPAPGLLRRCLLWFCGMSFLGSA*TWCLSC Trigger: ACAGCTGAGGCACCAGGTGCAGGCTGATCCTAAGAA...GCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGGTAAGGCCGACCCCGGGAGGGTACCCTGGGGAGCTCTGGGAGCTAACTTCACCACTGTCTCCTaGCTGCTGTCCTTGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MEGKADPGRVPWGALGANFTTVS*LLSLAD Trigger: GTCAGCCAAGGACAGCAGTCAGGAGACAGTGGTGAA...GTTAGCTCCCAGAGCTCCCCAGGGTACCCTCCCGGGGTCGGCCTTACCTTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR GCA 90 bp | GAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTCCTGTTCTGGGTCCCTGGTGCATGGTCAGTaGAGCTCGAGTGGCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETSLLSASSWSLGSCSGSLVHGQ*SSSGPA Trigger: GGCGGGGCCACTCGAGCTGCACTGACCATGCACCAG...GGACCCAGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAAGGTAAGGCCGACCCCGGGAGGGTACCCTGGGGAGCTCTGGGAGCTAACGACAAGGGCTCGGACTaGCCGGTAGTTGGCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MEGKADPGRVPWGALGANDKGSD*PVVGID Trigger: ATCTATGCCAACTACCGGGCAGTCCGAGCCCTTGTC...GTTAGCTCCCAGAGCTCCCCAGGGTACCCTCCCGGGGTCGGCCTTACCTTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | TACCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCACGGGCTGACGCTATCTaGGAAGCCCTGAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YPGELWELTPSRLTVCSPRADAI*EALRQQ Trigger: CTGCTGCCTCAGGGCTTCCCAGATAGCGTCAGCCCG...TGGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | GTACCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCGGACTGCCCGGTAGTTaGCATAGATGTGGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPWGALGANSFQANCVLPGLPGS*HRCGGR Trigger: CCGCCCTCCACATCTATGCCAACTACCGGGCAGTCC...GGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGGTAAGGCCGACCCCGGGAGGGTACCCTGGGGAGCTCTGGGAGCTAACACTGCTGTCCTTGGCTaGCACGTCTGCCATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MEGKADPGRVPWGALGANTAVLG*HVCHVV Trigger: AACAACATGGCAGACGTGTCAGCCAAGGACAGCAGT...GTTAGCTCCCAGAGCTCCCCAGGGTACCCTCCCGGGGTCGGCCTTACCTTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | GAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTCCTGTTCTGGGTCCGAGAGCCGGAGAGGCTaGAAGCAAAGGCCTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ETSLLSASSWSLGSCSGSESRRG*KQRPAR Trigger: CCGTGCAGGCCTTTGCTTCCAGCCTCTCCGGCTCTC...GGACCCAGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATGAGCTCATCCACCTCTAGATaGTGTTTCTCCGTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPAPGLLRRCLLWFCGMSSSTSR*CFSVFQ Trigger: CTGGAAGACGGAGAAACACCATCTAGAGGTGGATGA...GCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR GCA 90 bp | CCCTCACAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGAAGAGCGGTCAGTGCTaGCCAGGGTCCCCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSQRVRVSSLEWIPEKEQKSGQC*PGSPAS Trigger: GGAGGCGGGGGACCCTGGGCAGCACTGACCGCTCTT...CTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGCCTCAGCTGTGCCAGCTCTCCCGGAAGTGGCCCATCTTCCTGCAGGGGTGGCTCCATCTGATTaGCTGAAGCAGGTTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PGASAVPALPEVAHLPAGVAPSD*LKQVQV Trigger: TACTTGAACCTGCTTCAGCCAATCAGATGGAGCCAC...CCCTGCAGGAAGATGGGCCACTTCCGGGAGAGCTGGCACAGCTGAGGCACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGCACGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGTGGGCAGCAGCACGGATCTaGGGCCCGAAAGAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGARLLIRPSFLETRAMWAAARI*GPKERS Trigger: TGACCGCTCTTTCGGGCCTCAGATCCGTGCTGCTGC...CCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCGTGCTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCAGCTCAGAGCACCCTCACCAGCATGTGCTCCAACATGGCCCTGCACAGGACATGGCTACATCGTTaGGGATGTCGGCAAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSAQSTLTSMCSNMALHRTWLHR*GCRQRA Trigger: GGCTCTTTGCCGACATCCTCAACGATGTAGCCATGT...CCTGTGCAGGGCCATGTTGGAGCACATGCTGGTGAGGGTGCTCTGAGCTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCTCAGAGCACCCTCACCAGCATGTGCTCCAACATGGCCCTGCACAGGCTTCCACTGCTTGGCATTaGAGTCCAGTTTGCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSEHPHQHVLQHGPAQASTAWH*SPVCSP Trigger: AGGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGA...AGCCTGTGCAGGGCCATGTTGGAGCACATGCTGGTGAGGGTGCTCTGAGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| CDS-3UTR GCA 90 bp | TACCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCACCACTGTCTCCTGACTaGTGTCCTTGGCTGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: YPGELWELTPSRLTVCSPPLSPD*CPWLTR Trigger: ACGTGTCAGCCAAGGACAGCAGTCAGGAGACAGTGG...TGGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTCAAGACGGGCTGACGCTATCTaGGAAGCCCTGAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLDGVSPSSSQQPAVLSRRADAI*EALRQQ Trigger: CTGCTGCCTCAGGGCTTCCCAGATAGCGTCAGCCCG...TCTTGAAAGGACTGCAGGCTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGTGTTCCTCTGGGGCAGCTCTCCCGGAAGTaGCCCATCTTCCTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSQPQCPTHDDRGCVPLGQLSRK*PIFLQG Trigger: GCCCTGCAGGAAGATGGGCCACTTCCGGGAGAGCTG...CCCCAGAGGAACACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | CACCCTTCACTCTCAGCTCAGAGCACCCTCACCAGCATGTGCTCCAACATGGCCGAAGTGTCCCAGAGGTaGCTACCTTGGCTAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPSLSAQSTLTSMCSNMAEVSQR*LPWLGC Trigger: GCAACCTAGCCAAGGTAGCCACCTCTGGGACACTTC...GGCCATGTTGGAGCACATGCTGGTGAGGGTGCTCTGAGCTGAGAGTGAAGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTGTTGTGGCTGAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTCTATCTGGGAAGCCCTaGGGCAGCAGCACGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLWLKHRCSRLHPGLWALSGKP*GSSTDL Trigger: CAGATCCGTGCTGCTGCCTCAGGGCTTCCCAGATAG...AGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTCAGCCACAACAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR TCA 90 bp | CCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTCAAGAACTTTGGGAACAGTGTGTCTATCTGGGAAGCCCTaGGGCAGCAGCACGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSSSQQPAVLSRTLGTVCLSGKP*GSSTDL Trigger: CAGATCCGTGCTGCTGCCTCAGGGCTTCCCAGATAG...ACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGCTGCTGGCTGGAAGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTCCACTCATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGTTCACCACTGTCTCCTaGCTGCTGTCCTTGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WPSTHPPLDGVSPSSSQQFTTVS*LLSLAD Trigger: GTCAGCCAAGGACAGCAGTCAGGAGACAGTGGTGAA...CTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATGTGGCCCTCCACTCATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGGACAAGGGCTCGGACTaGCCGGTAGTTGGCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHVALHSSTSRWCFSVFQDKGSD*PVVGID Trigger: ATCTATGCCAACTACCGGGCAGTCCGAGCCCTTGTC...CTGGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGTGTTCCTCTGGGGCGAGCCAGGTGGACGTaGCAGCTGAAACGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSQPQCPTHDDRGCVPLGRARWT*QLKRRL Trigger: AAGCCTCCGTTTCAGCTGCCACGTCCACCTGGCTCG...CCCCAGAGGAACACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTGGAGCACGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATCGAGCCAGGTGGACGTaGCAGCTGAAACGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WAWSTAAHKTFFSGDKGHRARWT*QLKRRL Trigger: AAGCCTCCGTTTCAGCTGCCACGTCCACCTGGCTCG...ATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCGTGCTCCAAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATGTGGCCCTCCACTCATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCTGACTGCTGTCCTTaGCTGACACGTCTGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GHVALHSSTSRWCFSVFQPDCCP*LTRLPC Trigger: ACATGGCAGACGTGTCAGCCAAGGACAGCAGTCAGG...CTGGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTCATCCACCTCTAGATGGGGACTGCCCGGTAGTTaGCATAGATGTGGAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FFSGDKGHVALHSSTSRWGLPGS*HRCGGR Trigger: CCGCCCTCCACATCTATGCCAACTACCGGGCAGTCC...CCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | GAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTCCTGTTCTGGGTCCCCGAGAATCAGCCCATaGGTGGCAGCCCTTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ETSLLSASSWSLGSCSGSPRISP*VAALKT Trigger: TGTCTTAAGGGCTGCCACCCATGGGCTGATTCTCGG...GGACCCAGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR TCA 90 bp | GGCCATGTGGCCCTCCACTCATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGACTGCTGTCCTTGGCTaGCACGTCTGCCATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHVALHSSTSRWCFSVFQTAVLG*HVCHVV Trigger: AACAACATGGCAGACGTGTCAGCCAAGGACAGCAGT...CTGGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTCATCCACCTCTAGATCGGAGGCTTTTGCGTTaGCTACCCCTAAGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFLETRAMWPSTHPPLDRRLLR*LPLSPA Trigger: TGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCG...ATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGACAGTCTCGGGGCCTaGTTCTTGGCTCAGGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AWSGSQKRNRARIQQEGTDSLGA*FLAQGN Trigger: GTTGCCCTGAGCCAAGAAGCAGGCCCCGAGACTGTC...GGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR GCA 90 bp | CCCTCACAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGTCAGCCTGCACCTGGTaGCTCAGCTGTGCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSQRVRVSSLEWIPEKEQSACTW*LSCASS Trigger: AGAGCTGGCACAGCTGAGGCACCAGGTGCAGGCTGA...CTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTGGAGCACGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGCACTGGAGACCAAGTaGTGTAGGGGAACACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WAWSTAAHKTFFSGDKGHALETK*CRGTPR Trigger: CCTGGGTGTTCCCCTACACCACTTGGTCTCCAGTGC...ATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCGTGCTCCAAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR TCA 90 bp | CATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTCAGCTCAGAGACACTaGGGGAGAGAAGAGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HPPLDGVSPSSSQQPAVLSAQRH*GREECT Trigger: AGTGCACTCTTCTCTCCCTCAGTGTCTCTGAGCTGA...AAGGACTGCAGGCTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| CDS-3UTR GCA 90 bp | CGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTTCCACTGCTTGGCATTaGAGTCCAGTTTGCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLIRPSFLETRAMWPSTSTAWH*SPVCSP Trigger: AGGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGA...AGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTCATCCACCTCTAGATGGCCACTGTCTCCTGACTaGTGTCCTTGGCTGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: FFSGDKGHVALHSSTSRWPLSPD*CPWLTR Trigger: ACGTGTCAGCCAAGGACAGCAGTCAGGAGACAGTGG...CCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | CCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTCAAGAACTTTGGGAACAGTGTGTAGTACCTCTCCCCTCTaGAGGAAGTGCTCTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PSSSQQPAVLSRTLGTVCSTSPL*RKCSRT Trigger: GGTCCTAGAGCACTTCCTGCAGAGGGGAGAGGTACT...ACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGCTGCTGGCTGGAAGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTCATCCACCTCTAGATATCCCACAGCTGGTATaGCAGGTAATCCGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLETRAMWPSTHPPLDIPQLV*QVIRAD Trigger: GTCAGCCCGGATTACCTGCCATACCAGCTGTGGGAT...ATCTAGAGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCCTTTCACGAGCCAGGTaGACGTGGCAGCTGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: AWSGSQKRNRARIQQEGTLSRAR*TWQLKR Trigger: CCGTTTCAGCTGCCACGTCCACCTGGCTCGTGAAAG...GGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCATTGTGGCTCCATCTGATTaGCTGAAGCAGGTTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PWGALGANSFQANCVLPIVAPSD*LKQVQV Trigger: TACTTGAACCTGCTTCAGCCAATCAGATGGAGCCAC...AATGGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS-3UTR CCA 90 bp | CCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTCAAGAACTTTGGGAACAGTGTGTGGACAGAGACAGGGATaGCCAGAAACCTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSSQQPAVLSRTLGTVCGQRQG*PETCPQ Trigger: CTGTGGACAGGTTTCTGGCCATCCCTGTCTCTGTCC...ACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGCTGCTGGCTGGAAGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCGAGACAAGGGCCATGTaGCCCTCCACTCATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EWIPEKEQGKNTAGRNRFETRAM*PSTHPP Trigger: AGGTGGATGAGTGGAGGGCCACATGGCCCTTGTCTC...GAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS-3UTR CCA 90 bp | CGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCATGTGGCCCTCCACTGAGAGAAGAGTGCACTaGAGACCAAGTGGTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLIRPSFLETRAMWPSTERRVH*RPSGVG Trigger: CCCTACACCACTTGGTCTCCAGTGCACTCTTCTCTC...AGTGGAGGGCCACATGGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| CDS-3UTR TCA 90 bp | ATCCTGTTGTGGCTGAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTACATGGCTACATCGTTaGGGATGTCGGCAAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILLWLKHRCSRLHPGLWATWLHR*GCRQRA Trigger: GGCTCTTTGCCGACATCCTCAACGATGTAGCCATGT...AGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTCAGCCACAACAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS-3UTR GCA 90 bp | GGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTAGTACCTCTCCCCTCTaGAGGAAGTGCTCTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GVDPRKGTGQEYSRKEPVSTSPL*RKCSRT Trigger: GGTCCTAGAGCACTTCCTGCAGAGGGGAGAGGTACT...AACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS-3UTR CCA 90 bp | AGCCAGCAGCCTGCAGTCCTTTCAAGAACTTTGGGAACAGTGTGTCCAACACTTGCAATACTGCTTGGGTaGCTAGAGAGCCGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQQPAVLSRTLGTVCPTLAILLG*LESRRG Trigger: GCCTCTCCGGCTCTCTAGCCACCCAAGCAGTATTGC...AAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGCTGCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| CDS-3UTR CCA 90 bp | AGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGTGTTCCTCTGGGGTGCTCTAGGACCAGCTaGAGGCGGCTTTCATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSQPQCPTHDDRGCVPLGCSRTS*RRLSFK Trigger: CTTGAATGAAAGCCGCCTCCAGCTGGTCCTAGAGCA...CCCCAGAGGAACACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS-3UTR CCA 90 bp | CCGTCTTCCAGCCAGCAGCCTGCAGTCCTTTCAAGAACTTTGGGAACAGTGTGTTGCTCTAGGACCAGCTaGAGGCGGCTTTCATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSSQQPAVLSRTLGTVCCSRTS*RRLSFK Trigger: CTTGAATGAAAGCCGCCTCCAGCTGGTCCTAGAGCA...ACACACTGTTCCCAAAGTTCTTGAAAGGACTGCAGGCTGCTGGCTGGAAGACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| CDS-3UTR CCA 90 bp | GTACCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCTCCTTTCAAGAACTTTaGGAACAGTGTGTCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VPWGALGANSFQANCVLPSFQEL*EQCVQH Trigger: GTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGA...GGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CAA 72 bp | CCGGTTCCCTTCCTCTTTACCCGGGGTCCAGTCCATTaGATTGGTTGTCACTTCCCACAAGATGATGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVPFLFTRGPVH*IGCHFPQDDGQ Trigger: TTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCGGGTAAAGAGGAAGGGAACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CAA 72 bp | GTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTaGGATGCCATGAGCTACAACCAGGCCATGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLGLLCIKSRV*DAMSYNQAMLD Trigger: GTCCAACATGGCCTGGTTGTAGCTCATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS-3UTR CCA 90 bp | AGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTTGCAATACTGCTTGGGTaGCTAGAGAGCCGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGTGQEYSRKEPVPFLFAILLG*LESRRG Trigger: GCCTCTCCGGCTCTCTAGCCACCCAAGCAGTATTGC...AAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | TTGATGGGTCTCCCTGACAAGAATCCAGCTTTCTTTCTTAGGATCAGCCTGCACCTTTCACGAGCCAGGTaGACGTGGCAGCTGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LMGLPDKNPAFFLRISLHLSRAR*TWQLKR Trigger: CCGTTTCAGCTGCCACGTCCACCTGGCTCGTGAAAG...GTGCAGGCTGATCCTAAGAAAGAAAGCTGGATTCTTGTCAGGGAGACCCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCAGTGTGTCCAACACTTaGTGGGTCTCCCTGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWIPEKEQGKNTAGRNRFSVSNT*WVSLTR Trigger: TCTTGTCAGGGAGACCCATCAAGTGTTGGACACACT...GAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR GCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTCGAAAGAGCGGTCAGTaGTGCCCAGGGTCCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIEVCLYKNKTALLTSCCRKSGQ*CPGSPA Trigger: GGCGGGGGACCCTGGGCAGCACTGACCGCTCTTTCG...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTTATCCCACAGCTGGTATaGCAGGTAATCCGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKGTGQEYSRKEPVPFLFIPQLV*QVIRAD Trigger: GTCAGCCCGGATTACCTGCCATACCAGCTGTGGGAT...AAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTTACACTGGAGACCAAGTaGTGTAGGGGAACACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGTGQEYSRKEPVPFLFTLETK*CRGTPR Trigger: CCTGGGTGTTCCCCTACACCACTTGGTCTCCAGTGT...AAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR TCA 90 bp | CAGTCCTTTCAAGAACTTTGGGAACAGTGTGTCCAACACTTGATGGGTCTCCCTACATGGCTACATCGTTaGGGATGTCGGCAAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSFQELWEQCVQHLMGLPTWLHR*GCRQRA Trigger: GGCTCTTTGCCGACATCCTCAACGATGTAGCCATGT...AGGGAGACCCATCAAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| 3UTR CAA 72 bp | CATGTTGGACCCTCACAAAGAGTAAGGGTGAGCAGCTaGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HVGPSQRVRVSS*EWIPEKEQGKN Trigger: ATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGAGGGTCCAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR TCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTGCAGCAGCACGGATCTaGGGCCCGAAAGAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIEVCLYKNKTALLTSCCAAARI*GPKERS Trigger: TGACCGCTCTTTCGGGCCTCAGATCCGTGCTGCTGC...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR TCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTGGTGGACGTGGCAGCTaGAACGGAGGCTTTTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VIEVCLYKNKTALLTSCCGGRGS*NGGFCV Trigger: AACGCAAAAGCCTCCGTTTCAGCTGCCACGTCCACC...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR TCA 90 bp | GTATCAGAACTGAAGAACTATGATTCTCGGTGTAGACCTAAAACTTGGGGTGAATCCACCAGGCAAAGATaGTACGGCCCAACATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSELKNYDSRCRPKTWGESTRQR*YGPTCQ Trigger: CTGGCATGTTGGGCCGTATCATCTTTGCCTGGTGGA...TTCACCCCAAGTTTTAGGTCTACACCGAGAATCATAGTTCTTCAGTTCTGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR GCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTCGGAGGCTTTTGCGTTaGCTACCCCTAAGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIEVCLYKNKTALLTSCCRRLLR*LPLSPA Trigger: TGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCG...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | GTATCAGAACTGAAGAACTATGATTCTCGGTGTAGACCTAAAACTTGGGGTGAAGGACAGAGACAGGGATaGCCAGAAACCTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSELKNYDSRCRPKTWGEGQRQG*PETCPQ Trigger: CTGTGGACAGGTTTCTGGCCATCCCTGTCTCTGTCC...TTCACCCCAAGTTTTAGGTCTACACCGAGAATCATAGTTCTTCAGTTCTGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTCCTGACTGCTGTCCTTaGCTGACACGTCTGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VIEVCLYKNKTALLTSCCPDCCP*LTRLPC Trigger: ACATGGCAGACGTGTCAGCCAAGGACAGCAGTCAGG...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CCA 90 bp | GTATCAGAACTGAAGAACTATGATTCTCGGTGTAGACCTAAAACTTGGGGTGAAGAATCAGCCCATGGGTaGCAGCCCTTAAGACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSELKNYDSRCRPKTWGEESAHG*QPLRQS Trigger: AGACTGTCTTAAGGGCTGCCACCCATGGGCTGATTC...TTCACCCCAAGTTTTAGGTCTACACCGAGAATCATAGTTCTTCAGTTCTGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTTCAGCTCAGAGACACTaGAGACCAAGTGGTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VIEVCLYKNKTALLTSCCSAQRH*RPSGVG Trigger: CCCTACACCACTTGGTCTCCAGTGTCTCTGAGCTGA...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CAA 72 bp | TCCTTTCAAGAACTTTGGGAACAGTGTGTCCAACACTaGATGGGTCTCCCTGACAAGAATCCAGCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFQELWEQCVQH*MGLPDKNPAFF Trigger: AAAGAAAGCTGGATTCTTGTCAGGGAGACCCATCAAGTGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR GCA 90 bp | GTCATAGAGGTTTGCCTATACAAAAATAAAACTGCCCTCCTAACATCCTGTTGTTTCCAGCCAGCAGCCTaGAGTCCTTTCAAGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VIEVCLYKNKTALLTSCCFQPAA*SPFKNF Trigger: AAAGTTCTTGAAAGGACTGCAGGCTGCTGGCTGGAA...ACAACAGGATGTTAGGAGGGCAGTTTTATTTTTGTATAGGCAAACCTCTATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| 3UTR CAA 72 bp | TTGATTGGTTGTCACTTCCCACAAGATGATGGCCAATaGGTCATAGAGGTTTGCCTATACAAAAATAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LIGCHFPQDDGQ*VIEVCLYKNKT Trigger: AGTTTTATTTTTGTATAGGCAAACCTCTATGACCAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS GCA 90 bp | AGCGCCGAGCCCCGTCCCACTGCAGGCTCCCATCGGCGGCAGCGCTaGAGCCGCGCGGGGCTCCGGAGCCGAACTGCTCCGTGCACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAEPRPTAGSHRRQR*SRAGLRSRTAPCTA Trigger: CGCTGTGCACGGAGCAGTTCGGCTCCGGAGCCCCGCGCGGCTGCAGCGCTGCCGCCGATGGGAGCCTGCAGTGGGACGGGGCTCGGCGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS GCA 90 bp | CTGAGGCAGCAGCACGGATCTGAGGCCCGAAAGAGCGGTCAGTGCTaGCCAGGGTCCCCCGCCTCCACCCGCGTGCTGCCCAGGTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRQQHGSEARKSGQC*PGSPASTRVLPRFR Trigger: GCGAAACCTGGGCAGCACGCGGGTGGAGGCGGGGGACCCTGGGCAGCACTGACCGCTCTTTCGGGCCTCAGATCCGTGCTGCTGCCTCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS GCA 90 bp | GCCCTGAGGCAGCAGCACGGATCTGAGGCCCGAAAGAGCGGTCAGTaGTGCCCAGGGTCCCCCGCCTCCACCCGCGTGCTGCCCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALRQQHGSEARKSGQ*CPGSPASTRVLPRF Trigger: AAACCTGGGCAGCACGCGGGTGGAGGCGGGGGACCCTGGGCAGCACTGACCGCTCTTTCGGGCCTCAGATCCGTGCTGCTGCCTCAGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS CCA 90 bp | CTGCTGTCCTTGGCTGACACGTCTGCCATGTTGTTCCTTCGGGCCTaGTGCATGGTCAGTGCAGCTCGAGTGGCCCCGCCAGCCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSLADTSAMLFLRA*CMVSAARVAPPATP Trigger: TGGTGTGGCTGGCGGGGCCACTCGAGCTGCACTGACCATGCACCAGGCCCGAAGGAACAACATGGCAGACGTGTCAGCCAAGGACAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS GCA 90 bp | CTGTCCTTGGCTGACACGTCTGCCATGTTGTTCCTTCGGGCCTGGTaGATGGTCAGTGCAGCTCGAGTGGCCCCGCCAGCCACACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LSLADTSAMLFLRAW*MVSAARVAPPATPT Trigger: TGTTGGTGTGGCTGGCGGGGCCACTCGAGCTGCACTGACCATGCACCAGGCCCGAAGGAACAACATGGCAGACGTGTCAGCCAAGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | TCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGCAGTGTGTCCAACACTaGATGGGTCTCCCTGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAHYRGGGGNHQAAGGHQQCVQH*MGLPDK Trigger: CTTGTCAGGGAGACCCATCAAGTGTTGGACACACTG...CTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS CCA 90 bp | GGAATCCCACAGCTGGTATGGCAGGTAATCCGGGCTGACGCTATCTaGGAAGCCCTGAGGCAGCAGCACGGATCTGAGGCCCGAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GIPQLVWQVIRADAI*EALRQQHGSEARKS Trigger: GCTCTTTCGGGCCTCAGATCCGTGCTGCTGCCTCAGGGCTTCCCAGATAGCGTCAGCCCGGATTACCTGCCATACCAGCTGTGGGATTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS CCA 90 bp | GGAGAGGCTGGAAGCAAAGGCCTGCACGGAATCCCACAGCTGGTATaGCAGGTAATCCGGGCTGACGCTATCTGGGAAGCCCTGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEAGSKGLHGIPQLV*QVIRADAIWEALRQ Trigger: CTGCCTCAGGGCTTCCCAGATAGCGTCAGCCCGGATTACCTGCCATACCAGCTGTGGGATTCCGTGCAGGCCTTTGCTTCCAGCCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS CCA 90 bp | CCATGTTGTTCCTTCGGGCCTGGTGCATGGTCAGTGCAGCTCGAGTaGCCCCGCCAGCCACACCAACAATGCACTTGGCTAGGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCCSFGPGAWSVQLE*PRQPHQQCTWLGCW Trigger: CCAGCAACCTAGCCAAGTGCATTGTTGGTGTGGCTGGCGGGGCCACTCGAGCTGCACTGACCATGCACCAGGCCCGAAGGAACAACATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAGAGCACCCTCACCAGCATGTGCTCCAACATGGCCCTGCACAGGCTGGCTGCATTGCAGTCCAGTTaGCTCCCCTTCCACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQSTLTSMCSNMALHRLAALQSS*LPFHQA Trigger: TGCCTGGTGGAAGGGGAGCAAACTGGACTGCAATGC...AGCCAGCCTGTGCAGGGCCATGTTGGAGCACATGCTGGTGAGGGTGCTCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| CDS GCA 90 bp | CTGGAGGCGGCTTTCATTCAAGGTCTCCAGGACAAGGGCTCGGACTaGCCGGTAGTTGGCATAGATGTGGAGGGCGGTGAGCAGGACGAA | + |
|
Preference number: 5 (lower is better) Translates to: LEAAFIQGLQDKGSD*PVVGIDVEGGEQDE Trigger: TTCGTCCTGCTCACCGCCCTCCACATCTATGCCAACTACCGGGCAGTCCGAGCCCTTGTCCTGGAGACCTTGAATGAAAGCCGCCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS CCA 90 bp | ACGGAGGCTTTTGCGTTGCCTACCCCTAAGCCCTGCAATACTGCTTaGGTGGCTAGAGAGCCGGAGAGGCTGGAAGCAAAGGCCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TEAFALPTPKPCNTA*VAREPERLEAKACT Trigger: CGTGCAGGCCTTTGCTTCCAGCCTCTCCGGCTCTCTAGCCACCCAAGCAGTATTGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGGAGCTCTGGGAGCTAACTCCTTCCAGGCTAACTGTGTGCTCCCCATTGACACGTCTGCCATGTaGTTCCTTCGGGCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PWGALGANSFQANCVLPIDTSAM*FLRAWC Trigger: GCACCAGGCCCGAAGGAACAACATGGCAGACGTGTC...AATGGGGAGCACACAGTTAGCCTGGAAGGAGTTAGCTCCCAGAGCTCCCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS GCA 90 bp | GTGGCAGCTGAAACGGAGGCTTTTGCGTTGCCTACCCCTAAGCCCTaGAATACTGCTTGGGTGGCTAGAGAGCCGGAGAGGCTGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VAAETEAFALPTPKP*NTAWVAREPERLEA Trigger: TGCTTCCAGCCTCTCCGGCTCTCTAGCCACCCAAGCAGTATTGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCGTTTCAGCTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS GCA 90 bp | TCACGAGCCAGGTGGACGTGGCAGCTGAAACGGAGGCTTTTGCGTTaGCTACCCCTAAGCCCTGCAATACTGCTTGGGTGGCTAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRARWTWQLKRRLLR*LPLSPAILLGWLES Trigger: GCTCTCTAGCCACCCAAGCAGTATTGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCGTTTCAGCTGCCACGTCCACCTGGCTCGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS CCA 90 bp | CCAGTAGCCCTGCTAGGTTCACCACTGTCTCCTGACTGCTGTCCTTaGCTGACACGTCTGCCATGTTGTTCCTTCGGGCCTGGTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PVALLGSPLSPDCCP*LTRLPCCSFGPGAW Trigger: CCATGCACCAGGCCCGAAGGAACAACATGGCAGACGTGTCAGCCAAGGACAGCAGTCAGGAGACAGTGGTGAACCTAGCAGGGCTACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS CCA 90 bp | ACGGTTCGTGATGGCCCTCAACCAGCTGCTTCAGCTCAGAGACACTaGAGACCAAGTGGTGTAGGGGAACACCCAGGGACAGAGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVRDGPQPAASAQRH*RPSGVGEHPGTETG Trigger: CCCTGTCTCTGTCCCTGGGTGTTCCCCTACACCACTTGGTCTCCAGTGTCTCTGAGCTGAAGCAGCTGGTTGAGGGCCATCACGAACCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS CCA 90 bp | AGGCTTTTGCGTTGCCTACCCCTAAGCCCTGCAATACTGCTTGGGTaGCTAGAGAGCCGGAGAGGCTGGAAGCAAAGGCCTGCACGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLLRCLPLSPAILLG*LESRRGWKQRPARN Trigger: ATTCCGTGCAGGCCTTTGCTTCCAGCCTCTCCGGCTCTCTAGCCACCCAAGCAGTATTGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS CCA 90 bp | GGTTCAAGTACCTCTCCCCTCTGCAGGAAGTGCTCTAGGACCAGCTaGAGGCGGCTTTCATTCAAGGTCTCCAGGACAAGGGCTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSSTSPLCRKCSRTS*RRLSFKVSRTRART Trigger: AGTCCGAGCCCTTGTCCTGGAGACCTTGAATGAAAGCCGCCTCCAGCTGGTCCTAGAGCACTTCCTGCAGAGGGGAGAGGTACTTGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | GAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTCCTGTTCTGGGTCCGCATTGCAGTCCAGTTaGCTCCCCTTCCACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ETSLLSASSWSLGSCSGSALQSS*LPFHQA Trigger: TGCCTGGTGGAAGGGGAGCAAACTGGACTGCAATGC...GGACCCAGAACAGGAGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTTGGAGCACGGCTGCTCATAAGACCTTCTTTTCTGGAGACAAGGGCCGCATTGCAGTCCAGTTaGCTCCCCTTCCACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLGARLLIRPSFLETRAALQSS*LPFHQA Trigger: TGCCTGGTGGAAGGGGAGCAAACTGGACTGCAATGC...GGCCCTTGTCTCCAGAAAAGAAGGTCTTATGAGCAGCCGTGCTCCAAGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCTCGGGGCCTGCTTCTaGGCTCAGGGCAACCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GVDPRKGTGQEYSRKEPVLGACF*AQGNPY Trigger: GTACGGGTTGCCCTGAGCCAAGAAGCAGGCCCCGAG...AACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CAA 90 bp | TCTGGTGTTGGACCACCCTTCACTCTCAGCTCAGAGCACCCTCACCAGCATGTGCCAGAGGTGGCTACCTaGGCTAGGTTGCTGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGVGPPFTLSSEHPHQHVPEVAT*ARLLVL Trigger: CAGTACCAGCAACCTAGCCAAGGTAGCCACCTCTGG...CACATGCTGGTGAGGGTGCTCTGAGCTGAGAGTGAAGGGTGGTCCAACACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| CDS CCA 90 bp | TACGGCCCAACATGCCAGTTGAATCTTTCACGAGCCAGGTGGACGTaGCAGCTGAAACGGAGGCTTTTGCGTTGCCTACCCCTAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YGPTCQLNLSRARWT*QLKRRLLRCLPLSP Trigger: AGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCGTTTCAGCTGCCACGTCCACCTGGCTCGTGAAAGATTCAACTGGCATGTTGGGCCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS CCA 90 bp | CAGCTCAGAGACACTGAGGGAGAGAAGAGTGCACTGGAGACCAAGTaGTGTAGGGGAACACCCAGGGACAGAGACAGGGATGGCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLRDTEGEKSALETK*CRGTPRDRDRDGQK Trigger: TTTCTGGCCATCCCTGTCTCTGTCCCTGGGTGTTCCCCTACACCACTTGGTCTCCAGTGCACTCTTCTCTCCCTCAGTGTCTCTGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCCTCCACTCATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGGGCCCAACATGCCAGTaGAATCTTTCACGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPSTHPPLDGVSPSSSQQGPTCQ*NLSRAR Trigger: CCTGGCTCGTGAAAGATTCAACTGGCATGTTGGGCC...CTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTCAGAGCACCCTCACCAGCATGTGCTCCAACATGGCCCTGCACAGGCTAACATGGCTACATCGTaGAGGATGTCGGCAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSEHPHQHVLQHGPAQANMATS*RMSAKS Trigger: GCTCTTTGCCGACATCCTCAACGATGTAGCCATGTT...AGCCTGTGCAGGGCCATGTTGGAGCACATGCTGGTGAGGGTGCTCTGAGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| CDS-3UTR CAA 90 bp | ATGGAAGGTAAGGCCGACCCCGGGAGGGTACCCTGGGGAGCTCTGGGAGCTAACGTCCTTTCAAGAACTTaGGGAACAGTGTGTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: MEGKADPGRVPWGALGANVLSRT*GTVCPT Trigger: TGTTGGACACACTGTTCCCAAAGTTCTTGAAAGGAC...GTTAGCTCCCAGAGCTCCCCAGGGTACCCTCCCGGGGTCGGCCTTACCTTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS TCA 90 bp | GACAGAGACAGGGATGGCCAGAAACCTGTCCACAGTGGCTCCATCTaGTTGGCTGAAGCAGGTTCAAGTACCTCTCCCCTCTGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DRDRDGQKPVHSGSI*LAEAGSSTSPLCRK Trigger: CTTCCTGCAGAGGGGAGAGGTACTTGAACCTGCTTCAGCCAATCAGATGGAGCCACTGTGGACAGGTTTCTGGCCATCCCTGTCTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS TCA 90 bp | CGTACCTGGTTTCGTGACTTGTTCCAGCAAAGGAGGTACGGTTCGTaGTGGCCCTCAACCAGCTGCTTCAGCTCAGAGACACTGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RTWFRDLFQQRRYGS*WPSTSCFSSETLET Trigger: GGTCTCCAGTGTCTCTGAGCTGAAGCAGCTGGTTGAGGGCCATCACGAACCGTACCTCCTTTGCTGGAACAAGTCACGAAACCAGGTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS CCA 90 bp | GAGACAGGGATGGCCAGAAACCTGTCCACAGTGGCTCCATCTGATTaGCTGAAGCAGGTTCAAGTACCTCTCCCCTCTGCAGGAAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ETGMARNLSTVAPSD*LKQVQVPLPSAGSA Trigger: AGCACTTCCTGCAGAGGGGAGAGGTACTTGAACCTGCTTCAGCCAATCAGATGGAGCCACTGTGGACAGGTTTCTGGCCATCCCTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGTGTTGGACCACCCTTCACTCTCAGCTCAGAGCACCCTCACCAGCATGTGAAGAGCCTCCACTGCTaGGCATTGCAGTCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGVGPPFTLSSEHPHQHVKSLHC*ALQSSL Trigger: CAAACTGGACTGCAATGCCAAGCAGTGGAGGCTCTT...CACATGCTGGTGAGGGTGCTCTGAGCTGAGAGTGAAGGGTGGTCCAACACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGACCACCCTTCACTCTCAGCTCAGAGCACCCTCACCAGCATGTGCTCCAAGCTACCTTGGCTAGGTaGCTGGTACTGACAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: VGPPFTLSSEHPHQHVLQATLAR*LVLTVM Trigger: CATGACTGTCAGTACCAGCAACCTAGCCAAGGTAGC...TTGGAGCACATGCTGGTGAGGGTGCTCTGAGCTGAGAGTGAAGGGTGGTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
||
| CDS-3UTR CAA 90 bp | CATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGCCTGCAGTCCTTAAGAGCCTCCACTGCTaGGCATTGCAGTCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HPPLDGVSPSSSQQPAVLKSLHC*ALQSSL Trigger: CAAACTGGACTGCAATGCCAAGCAGTGGAGGCTCTT...AAGGACTGCAGGCTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | GGCCATGTGGCCCTCCACTCATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGACACCAACAATGCACTaGGCTAGGTTGCTGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GHVALHSSTSRWCFSVFQTPTMH*ARLLVL Trigger: CAGTACCAGCAACCTAGCCAAGTGCATTGTTGGTGT...CTGGAAGACGGAGAAACACCATCTAGAGGTGGATGAGTGGAGGGCCACATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCGGCCCAACATGCCAGTaGAATCTTTCACGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGEQLGVDPRKGTGQEYSGPTCQ*NLSRAR Trigger: CCTGGCTCGTGAAAGATTCAACTGGCATGTTGGGCC...GCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
||
| CDS-3UTR CAA 90 bp | CATCCACCTCTAGATGGTGTTTCTCCGTCTTCCAGCCAGCAGCCTGCAGTCCTTAACATGGCTACATCGTaGAGGATGTCGGCAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HPPLDGVSPSSSQQPAVLNMATS*RMSAKS Trigger: GCTCTTTGCCGACATCCTCAACGATGTAGCCATGTT...AAGGACTGCAGGCTGCTGGCTGGAAGACGGAGAAACACCATCTAGAGGTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGGGTCTCCCTGACAAGAATCCAGCTTTCTTTCTTAGGATCAGCCTGCACGACACGTCTGCCATGTaGTTCCTTCGGGCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LMGLPDKNPAFFLRISLHDTSAM*FLRAWC Trigger: GCACCAGGCCCGAAGGAACAACATGGCAGACGTGTC...GTGCAGGCTGATCCTAAGAAAGAAAGCTGGATTCTTGTCAGGGAGACCCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCACAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGAAGAGCCTCCACTGCTaGGCATTGCAGTCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSQRVRVSSLEWIPEKEQKSLHC*ALQSSL Trigger: CAAACTGGACTGCAATGCCAAGCAGTGGAGGCTCTT...CTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS-3UTR CAA 90 bp | ATCCTGTTGTGGCTGAAACATCGTTGCTCTCGGCTTCATCCTGGTCTCTGGGCTAACATGGCTACATCGTaGAGGATGTCGGCAAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: ILLWLKHRCSRLHPGLWANMATS*RMSAKS Trigger: GCTCTTTGCCGACATCCTCAACGATGTAGCCATGTT...AGCCCAGAGACCAGGATGAAGCCGAGAGCAACGATGTTTCAGCCACAACAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS-3UTR CAA 90 bp | AAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCACACCAACAATGCACTaGGCTAGGTTGCTGGTACTG | + |
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Preference number: 5 (lower is better) Translates to: KGEQLGVDPRKGTGQEYSTPTMH*ARLLVL Trigger: CAGTACCAGCAACCTAGCCAAGTGCATTGTTGGTGT...GCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS GCA 72 bp | CGGGAGAGCCAGCCCCAGCGCCGAGCCCCGTCCCACTaGAGGCTCCCATCGGCGGCAGCGCTGCAGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: RESQPQRRAPSH*RLPSAAALQPR Trigger: GCGCGGCTGCAGCGCTGCCGCCGATGGGAGCCTGCAGTGGGACGGGGCTCGGCGCTGGGGCTGGCTCTCCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS GCA 72 bp | CCCCGTCCCACTGCAGGCTCCCATCGGCGGCAGCGCTaGAGCCGCGCGGGGCTCCGGAGCCGAACTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: PRPTAGSHRRQR*SRAGLRSRTAP Trigger: CGGAGCAGTTCGGCTCCGGAGCCCCGCGCGGCTGCAGCGCTGCCGCCGATGGGAGCCTGCAGTGGGACGGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS GCA 72 bp | GTCAGTGCTGCCCAGGGTCCCCCGCCTCCACCCGCGTaGTGCCCAGGTTTCGCTATCGGGGCCCGGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: VSAAQGPPPPPA*CPGFAIGARES Trigger: GCTCTCCCGGGCCCCGATAGCGAAACCTGGGCAGCACGCGGGTGGAGGCGGGGGACCCTGGGCAGCACTGAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS GCA 72 bp | CAGCAGCACGGATCTGAGGCCCGAAAGAGCGGTCAGTaGTGCCCAGGGTCCCCCGCCTCCACCCGCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QQHGSEARKSGQ*CPGSPASTRVL Trigger: CAGCACGCGGGTGGAGGCGGGGGACCCTGGGCAGCACTGACCGCTCTTTCGGGCCTCAGATCCGTGCTGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS GCA 72 bp | GCTGACACGTCTGCCATGTTGTTCCTTCGGGCCTGGTaGATGGTCAGTGCAGCTCGAGTGGCCCCGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ADTSAMLFLRAW*MVSAARVAPPA Trigger: GGCTGGCGGGGCCACTCGAGCTGCACTGACCATGCACCAGGCCCGAAGGAACAACATGGCAGACGTGTCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CCA 72 bp | TTGGCTGACACGTCTGCCATGTTGTTCCTTCGGGCCTaGTGCATGGTCAGTGCAGCTCGAGTGGCCCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: LADTSAMLFLRA*CMVSAARVAPP Trigger: TGGCGGGGCCACTCGAGCTGCACTGACCATGCACCAGGCCCGAAGGAACAACATGGCAGACGTGTCAGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS GCA 72 bp | TGCCATGTTGTTCCTTCGGGCCTGGTGCATGGTCAGTaGAGCTCGAGTGGCCCCGCCAGCCACACCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: CHVVPSGLVHGQ*SSSGPASHTNN Trigger: ATTGTTGGTGTGGCTGGCGGGGCCACTCGAGCTGCACTGACCATGCACCAGGCCCGAAGGAACAACATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CCA 72 bp | GGAAGCAAAGGCCTGCACGGAATCCCACAGCTGGTATaGCAGGTAATCCGGGCTGACGCTATCTGGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GSKGLHGIPQLV*QVIRADAIWEA Trigger: GGCTTCCCAGATAGCGTCAGCCCGGATTACCTGCCATACCAGCTGTGGGATTCCGTGCAGGCCTTTGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CCA 72 bp | GCAATACTGCTTGGGTGGCTAGAGAGCCGGAGAGGCTaGAAGCAAAGGCCTGCACGGAATCCCACAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AILLGWLESRRG*KQRPARNPTAG Trigger: ACCAGCTGTGGGATTCCGTGCAGGCCTTTGCTTCCAGCCTCTCCGGCTCTCTAGCCACCCAAGCAGTATTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CAA 90 bp | TTCACGAGCCAGGTGGACGTGGCAGCTGAAACGGAGGCTTTTGCGTaGCCTACCCCTAAGCCCTGCAATACTGCTTGGGTGGCTAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: FTSQVDVAAETEAFA*PTPKPCNTAWVARE Trigger: CTCTCTAGCCACCCAAGCAGTATTGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCGTTTCAGCTGCCACGTCCACCTGGCTCGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS GCA 72 bp | GAAACGGAGGCTTTTGCGTTGCCTACCCCTAAGCCCTaGAATACTGCTTGGGTGGCTAGAGAGCCGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ETEAFALPTPKP*NTAWVAREPER Trigger: CCTCTCCGGCTCTCTAGCCACCCAAGCAGTATTGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS GCA 72 bp | GCTTTCATTCAAGGTCTCCAGGACAAGGGCTCGGACTaGCCGGTAGTTGGCATAGATGTGGAGGGCGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AFIQGLQDKGSD*PVVGIDVEGGE Trigger: CTCACCGCCCTCCACATCTATGCCAACTACCGGGCAGTCCGAGCCCTTGTCCTGGAGACCTTGAATGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CCA 72 bp | ACCTCTCCCCTCTGCAGGAAGTGCTCTAGGACCAGCTaGAGGCGGCTTTCATTCAAGGTCTCCAGGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: TSPLCRKCSRTS*RRLSFKVSRTR Trigger: CCTTGTCCTGGAGACCTTGAATGAAAGCCGCCTCCAGCTGGTCCTAGAGCACTTCCTGCAGAGGGGAGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CCA 72 bp | GATGGCCCTCAACCAGCTGCTTCAGCTCAGAGACACTaGAGACCAAGTGGTGTAGGGGAACACCCAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: DGPQPAASAQRH*RPSGVGEHPGT Trigger: TGTCCCTGGGTGTTCCCCTACACCACTTGGTCTCCAGTGTCTCTGAGCTGAAGCAGCTGGTTGAGGGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS GCA 72 bp | CCAGTAGCCCTGCTAGGTTCACCACTGTCTCCTGACTaGTGTCCTTGGCTGACACGTCTGCCATGTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PVALLGSPLSPD*CPWLTRLPCCS Trigger: GGAACAACATGGCAGACGTGTCAGCCAAGGACAGCAGTCAGGAGACAGTGGTGAACCTAGCAGGGCTACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CCA 72 bp | ACCAGCTGCTTCAGCTCAGAGACACTGGAGACCAAGTaGTGTAGGGGAACACCCAGGGACAGAGACAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: TSCFSSETLETK*CRGTPRDRDRD Trigger: ATCCCTGTCTCTGTCCCTGGGTGTTCCCCTACACCACTTGGTCTCCAGTGTCTCTGAGCTGAAGCAGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS CCA 72 bp | GACACTGAGGGAGAGAAGAGTGCACTGGAGACCAAGTaGTGTAGGGGAACACCCAGGGACAGAGACAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: DTEGEKSALETK*CRGTPRDRDRD Trigger: ATCCCTGTCTCTGTCCCTGGGTGTTCCCCTACACCACTTGGTCTCCAGTGCACTCTTCTCTCCCTCAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126263.8 |
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| CDS CAA 90 bp | AATCTTTCACGAGCCAGGTGGACGTGGCAGCTGAAACGGAGGCTTTaGCGTTGCCTACCCCTAAGCCCTGCAATACTGCTTGGGTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: NLSRARWTWQLKRRL*RCLPLSPAILLGWL Trigger: TAGCCACCCAAGCAGTATTGCAGGGCTTAGGGGTAGGCAACGCAAAAGCCTCCGTTTCAGCTGCCACGTCCACCTGGCTCGTGAAAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS GCA 72 bp | GAAGCAGGTTCAAGTACCTCTCCCCTCTGCAGGAAGTaGTCTAGGACCAGCTGGAGGCGGCTTTCATTCAAG | + |
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Preference number: 6 (lower is better) Translates to: EAGSSTSPLCRK*SRTSWRRLSFK Trigger: CTTGAATGAAAGCCGCCTCCAGCTGGTCCTAGAGCACTTCCTGCAGAGGGGAGAGGTACTTGAACCTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CCA 72 bp | ACATGCCAGTTGAATCTTTCACGAGCCAGGTGGACGTaGCAGCTGAAACGGAGGCTTTTGCGTTGCCTACCC | + |
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Preference number: 6 (lower is better) Translates to: TCQLNLSRARWT*QLKRRLLRCLP Trigger: GGGTAGGCAACGCAAAAGCCTCCGTTTCAGCTGCCACGTCCACCTGGCTCGTGAAAGATTCAACTGGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CAA 72 bp | TTGAGGATGTCGGCAAAGAGCCTCCACTGCTTGGCATaGCAGTCCAGTTTGCTCCCCTTCCACCAGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRMSAKSLHCLA*QSSLLPFHQAK Trigger: CTTTGCCTGGTGGAAGGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGAGGCTCTTTGCCGACATCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 ENSMUST00000137677.2 |
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| CDS TCA 72 bp | CCAGAAACCTGTCCACAGTGGCTCCATCTGATTGGCTaGAGCAGGTTCAAGTACCTCTCCCCTCTGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PETCPQWLHLIG*SRFKYLSPLQE Trigger: TTCCTGCAGAGGGGAGAGGTACTTGAACCTGCTTCAGCCAATCAGATGGAGCCACTGTGGACAGGTTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CAA 72 bp | GCCCCGCCAGCCACACCAACAATGCACTTGGCTAGGTaGCTGGTACTGACAGTCATGGTGAAAAAGATTGGG | + |
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Preference number: 6 (lower is better) Translates to: APPATPTMHLAR*LVLTVMVKKIG Trigger: CCCAATCTTTTTCACCATGACTGTCAGTACCAGCAACCTAGCCAAGTGCATTGTTGGTGTGGCTGGCGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS TCA 72 bp | TTTCGTGACTTGTTCCAGCAAAGGAGGTACGGTTCGTaGTGGCCCTCAACCAGCTGCTTCAGCTCAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: FRDLFQQRRYGS*WPSTSCFSSET Trigger: TGTCTCTGAGCTGAAGCAGCTGGTTGAGGGCCATCACGAACCGTACCTCCTTTGCTGGAACAAGTCACGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033044.16 |
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| CDS TCA 72 bp | TGCAGTCCAGTTTGCTCCCCTTCCACCAGGCAAAGATaGTACGGCCCAACATGCCAGTTGAATCTTTCACGA | + |
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Preference number: 6 (lower is better) Translates to: CSPVCSPSTRQR*YGPTCQLNLSR Trigger: TCGTGAAAGATTCAACTGGCATGTTGGGCCGTATCATCTTTGCCTGGTGGAAGGGGAGCAAACTGGACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 |
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| CDS CAA 72 bp | ATGGGAGCCATAATCTCTAGGAACATGGCTACATCGTaGAGGATGTCGGCAAAGAGCCTCCACTGCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: MGAIISRNMATS*RMSAKSLHCLA Trigger: TGCCAAGCAGTGGAGGCTCTTTGCCGACATCCTCAACGATGTAGCCATGTTCCTAGAGATTATGGCTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033044.16 ENSMUST00000126263.8 ENSMUST00000137677.2 |
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| CDS CAA 72 bp | TACAGAAGTGTCCCAGAGGTGGCTACCTTGGCTAGGTaGCTGGTACTGACAGTCATGGTGAAAAAGATTGGG | + |
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Preference number: 6 (lower is better) Translates to: YRSVPEVATLAR*LVLTVMVKKIG Trigger: CCCAATCTTTTTCACCATGACTGTCAGTACCAGCAACCTAGCCAAGGTAGCCACCTCTGGGACACTTCTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
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| CDS CAA 72 bp | TATCTCAGGTACAGAAGTGTCCCAGAGGTGGCTACCTaGGCTAGGTTGCTGGTACTGACAGTCATGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: YLRYRSVPEVAT*ARLLVLTVMVK Trigger: TTTCACCATGACTGTCAGTACCAGCAACCTAGCCAAGGTAGCCACCTCTGGGACACTTCTGTACCTGAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
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| CDS CAA 90 bp | TATCTCAGGTACAGAAGTGTCCCAGAGGTGGCTACCTTGGCTAGGTaGCTGGTACTGACAGTCATGGTGAAAAAGATTGGGTACATGGGA | + |
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Preference number: 6 (lower is better) Translates to: YLRYRSVPEVATLAR*LVLTVMVKKIGYMG Trigger: TCCCATGTACCCAATCTTTTTCACCATGACTGTCAGTACCAGCAACCTAGCCAAGGTAGCCACCTCTGGGACACTTCTGTACCTGAGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
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| CDS CAA 90 bp | TGGTATTGGTATCTCAGGTACAGAAGTGTCCCAGAGGTGGCTACCTaGGCTAGGTTGCTGGTACTGACAGTCATGGTGAAAAAGATTGGG | + |
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Preference number: 6 (lower is better) Translates to: WYWYLRYRSVPEVAT*ARLLVLTVMVKKIG Trigger: CCCAATCTTTTTCACCATGACTGTCAGTACCAGCAACCTAGCCAAGGTAGCCACCTCTGGGACACTTCTGTACCTGAGATACCAATACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137677.2 |
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