Pregenerated sensors for RUNX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070691Ensembl transcript IDs: ENSMUST00000056977.14, ENSMUST00000119564.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTaGACAGAGCTCTGGGAGCCACTGCCAGCTCTGGCCCCTGGGACC | + |
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Preference number: 1 (lower is better) Translates to: SVLWEVPTSSAQTCG*TELWEPLPALAPGT Trigger: GGTCCCAGGGGCCAGAGCTGGCAGTGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR CCA 90 bp | GAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTaGCTGGACAGAGCTCTGGGAGCCACTGCCAGCTCTGGCCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: EQCPVGGPHILCSNL*LDRALGATASSGPW Trigger: CCAGGGGCCAGAGCTGGCAGTGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR CCA 90 bp | GAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTaGGAGCCACTGCCAGCTCTGGCCCCTGGGACCAGGCCAAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: EVPTSSAQTCGWTEL*EPLPALAPGTRPKS Trigger: AGACTTTGGCCTGGTCCCAGGGGCCAGAGCTGGCAGTGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR TCA 90 bp | CCAGTAGCGAAGCAGGTAGGAGGGCAATGGGTCGTAGCTGCTTCCTaGGAAGAGGTGAGAAGGCCCCCTCTGGGTGCAGGGAGCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PVAKQVGGQWVVAAS*EEVRRPPLGAGSWK Trigger: CTTCCAGCTCCCTGCACCCAGAGGGGGCCTTCTCACCTCTTCTCAGGAAGCAGCTACGACCCATTGCCCTCCTACCTGCTTCGCTACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR GCA 90 bp | CCATGGACCAGTAGCGAAGCAGGTAGGAGGGCAATGGGTCGTAGCTaGTTCCTGAGAAGAGGTGAGAAGGCCCCCTCTGGGTGCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: PWTSSEAGRRAMGRS*FLRRGEKAPSGCRE Trigger: CTCCCTGCACCCAGAGGGGGCCTTCTCACCTCTTCTCAGGAAGCAGCTACGACCCATTGCCCTCCTACCTGCTTCGCTACTGGTCCATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR GCA 90 bp | CATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGGAGCCACTaGCAGCTCTGGCCCCTGGGACCAGGCCAAAGTCTGTTTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: HPLLKLVAGQSSGSH*QLWPLGPGQSLFLL Trigger: AAGAAGAAACAGACTTTGGCCTGGTCCCAGGGGCCAGAGCTGGCAGTGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR CCA 90 bp | CTCAAACTTGTGGCTGGACAGAGCTCTGGGAGCCACTGCCAGCTCTaGCCCCTGGGACCAGGCCAAAGTCTGTTTCTTCTTGTAGTCTCG | + |
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Preference number: 1 (lower is better) Translates to: LKLVAGQSSGSHCQL*PLGPGQSLFLLVVS Trigger: CGAGACTACAAGAAGAAACAGACTTTGGCCTGGTCCCAGGGGCCAGAGCTGGCAGTGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR CCA 90 bp | ACCTACCAGAGTGTGTATGTGGGTGGCTGTTTCAGGTGCAGGCAATaGGGAAGGCCAAGCACAAGGCAGAGGCCATCACTACGGGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: TYQSVYVGGCFRCRQ*GRPSTRQRPSLRGS Trigger: TGAGCCCCGTAGTGATGGCCTCTGCCTTGTGCTTGGCCTTCCCCATTGCCTGCACCTGAAACAGCCACCCACATACACACTCTGGTAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR TCA 90 bp | AAGAGCTTTTTAACCAATCCCACTGACAATCGCCCGCCCACAGACTaGAGAGGACATCTGATCTCTGCTTGGATGCTGCTCTGCCATCGC | + |
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Preference number: 1 (lower is better) Translates to: KSFLTNPTDNRPPTD*RGHLISAWMLLCHR Trigger: GCGATGGCAGAGCAGCATCCAAGCAGAGATCAGATGTCCTCTTCAGTCTGTGGGCGGGCGATTGTCAGTGGGATTGGTTAAAAAGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR CCA 90 bp | CCTCTGATTCTAGAATTGATCCTGGGCATGGCTGGAGACAAGAGGTaGGTTTGGGATGCACAGCTAGAGAGGACATTGATTTGGGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: PLILELILGMAGDKR*VWDAQLERTLIWVG Trigger: TCCAACCCAAATCAATGTCCTCTCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAATTCTAGAATCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGTCCCCAGGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCTCTGGGAGCCACTaGCAGCTCTGGCCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: DGPQGSVCVCVCVCVCVCSSGSH*QLWPLG Trigger: TCCCAGGGGCCAGAGCTGGCAGTGGCTCCCAGAGCT...ACACACACACACACACACACACACACACACACACACACTGCCCTGGGGACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR-3UTR GCA 90 bp | TTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTAGAGAGCTCTGGGAGCCACTaGCAGCTCTGGCCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LILGMAGDKRWVWDAQLESSGSH*QLWPLG Trigger: TCCCAGGGGCCAGAGCTGGCAGTGGCTCCCAGAGCT...CTCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAGACTCCACAGGGCCTCCTGGAGGTCTTGTCCCCTTCTGTGAAGAATGTAGCCACTGCCAGCTCTaGCCCCTGGGACCAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: TRDSTGPPGGLVPFCEECSHCQL*PLGPGQ Trigger: TTGGCCTGGTCCCAGGGGCCAGAGCTGGCAGTGGCT...ACATTCTTCACAGAAGGGGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR-3UTR CCA 90 bp | AGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGAGCCACTGCCAGCTCTaGCCCCTGGGACCAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RTLIWVGAVSCGRSPHPLSHCQL*PLGPGQ Trigger: TTGGCCTGGTCCCAGGGGCCAGAGCTGGCAGTGGCT...CAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCATCGCACACCTCACCAGAGACTCCACAGGGCCTCCTGGAGGTCTTGTCCTTTGATGGGCATGGATaGTCCCCAGGGCAGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LPSHTSPETPQGLLEVLSFDGHG*SPGQCV Trigger: CACACACTGCCCTGGGGACCATCCATGCCCATCAAA...GGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGTGAGGTGTGCGATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR CAA 90 bp | GAGGGAGGGAGAGAAAGTCCAGACATCTCTGAGCCTGAGCTTCTCTaGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTAGCCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: EGGRESPDISEPELL*PAKALPTQAGVASD Trigger: ATCAGAGGCTACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAGAAGCTCAGGCTCAGAGATGTCTGGACTTTCTCTCCCTCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR CAA 90 bp | CCATCGCACACCTCACCAGAGACTCCACAGGGCCTCCTGGAGGTCTaGTCCCCTTCTGTGAAGAATGTGAAGTCAGGACCCTGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PSHTSPETPQGLLEV*SPSVKNVKSGPWWW Trigger: CCACCACCAGGGTCCTGACTTCACATTCTTCACAGAAGGGGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGTGAGGTGTGCGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR-3UTR CCA 90 bp | GATTGTCGGGGACCCCCTGACCTACCAGAGTGTGTATGTGGGTGGCTGTTTCAGGCTCAAACTTGTGGCTaGACAGAGCTCTGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: DCRGPPDLPECVCGWLFQAQTCG*TELWEP Trigger: TGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGC...CTGAAACAGCCACCCACATACACACTCTGGTAGGTCAGGGGGTCCCCGACAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTATGTGGGTGGCTGTTTCAGGTGCAGGCAATGGGGAAGGCCAAGCACAACTCTCTTCAGGGGAGTaGAACCTTCCCAGGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: VCMWVAVSGAGNGEGQAQLSSGE*NLPRGL Trigger: CAAACCCCTGGGAAGGTTTCACTCCCCTGAAGAGAG...TTGTGCTTGGCCTTCCCCATTGCCTGCACCTGAAACAGCCACCCACATACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR-3UTR CCA 90 bp | GAGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTaGACAGAGCTCTGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: EDIDLGWSSVLWEVPTSSAQTCG*TELWEP Trigger: TGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGC...AGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTAGATGGAGCAGTGTCCTGTaGGAGGTCCCCACATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: IDPGHGWRQEVGLGCTARWSSVL*EVPTSS Trigger: AGAGGATGTGGGGACCTCCCACAGGACACTGCTCCA...TCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTAGACTCTGCTCAAACTTGTaGCTGGACAGAGCTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: IDPGHGWRQEVGLGCTARLCSNL*LDRALG Trigger: TCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAG...TCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAACAAAAACAACAAACCAAACATACAAGCAGCCTATAGTGCAAAGCAGGCCGCTTGGATGCTGCTCTaGCATCGCACACCTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: KNKNNKPNIQAAYSAKQAAWMLL*HRTPHQ Trigger: CTGGTGAGGTGTGCGATGGCAGAGCAGCATCCAAGC...GGCCTGCTTTGCACTATAGGCTGCTTGTATGTTTGGTTTGTTGTTTTTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR-3UTR CAA 90 bp | CTGCCATCGCACACCTCACCAGAGACTCCACAGGGCCTCCTGGAGGTCTTGTCCGAGCCTGAGCTTCTCTaGCCAGCAAAGGCCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: LPSHTSPETPQGLLEVLSEPELL*PAKALP Trigger: GGGGAGGGCCTTTGCTGGCAAGAGAAGCTCAGGCTC...GGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGTGAGGTGTGCGATGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR GCA 72 bp | TTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTaGTCAAACTTGTGGCTGGACAGAGCTCTGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: LEQCPVGGPHIL*SNLWLDRALGA Trigger: GGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR TCA 72 bp | CAAGGCAGAGGCCATCACTACGGGGCTCACTCAGTTTaGAAAACCAGCCGTGGGCCAGCCAGCTCTGGTAAG | + |
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Preference number: 3 (lower is better) Translates to: QGRGHHYGAHSV*KTSRGPASSGK Trigger: CTTACCAGAGCTGGCTGGCCCACGGCTGGTTTTTCAAACTGAGTGAGCCCCGTAGTGATGGCCTCTGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR CCA 72 bp | CCAGGCCAAAGTCTGTTTCTTCTTGTAGTCTCGGGCTaGAGGGAAGGATTCGGCTGGCCCGAGAGTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: PGQSLFLLVVSG*REGFGWPESLQ Trigger: CTGGAGACTCTCGGGCCAGCCGAATCCTTCCCTCCAGCCCGAGACTACAAGAAGAAACAGACTTTGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTTGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTAGCCTCTGATTCTAGAAGACAAGAGGTGGGTTaGGGATGCACAGCTAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LLPAKALPTQAGVASDSRRQEVG*GCTARE Trigger: CTCTCTAGCTGTGCATCCCAAACCCACCTCTTGTCT...TCTAGAATCAGAGGCTACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR CAA 90 bp | GATTGTCGGGGACCCCCTGACCTACCAGAGTGTGTATGTGGGTGGCTGTTTCAGCTAGGGACAAACAAGTaGGGAGCAGGACTGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: DCRGPPDLPECVCGWLFQLGTNK*GAGLWP Trigger: AGGCCACAGTCCTGCTCCCAACTTGTTTGTCCCTAG...CTGAAACAGCCACCCACATACACACTCTGGTAGGTCAGGGGGTCCCCGACAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR GCA 72 bp | TGCTTCCTGAGAAGAGGTGAGAAGGCCCCCTCTGGGTaGAGGGAGCTGGAAGGTTACCTCAGCTACTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: CFLRRGEKAPSG*RELEGYLSYFQ Trigger: TTGGAAGTAGCTGAGGTAACCTTCCAGCTCCCTGCACCCAGAGGGGGCCTTCTCACCTCTTCTCAGGAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR-3UTR CAA 90 bp | CTCTTGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTAGCCTCTGATTCTAGACAGCTAGAGAGGACATaGATTTGGGTTGGAGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: LLPAKALPTQAGVASDSRQLERT*IWVGAV Trigger: CACTGCTCCAACCCAAATCAATGTCCTCTCTAGCTG...TCTAGAATCAGAGGCTACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR TCA 72 bp | CATGGTAAGACTTTCGGCCAGGACCTGTCTGCCCCCTaGGAACCCAGTAGGCAATTCAGGCTGGAGTATGCT | + |
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Preference number: 3 (lower is better) Translates to: HGKTFGQDLSAP*EPSRQFRLEYA Trigger: AGCATACTCCAGCCTGAATTGCCTACTGGGTTCTCAGGGGGCAGACAGGTCCTGGCCGAAAGTCTTACCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR TCA 72 bp | TCTGCTCAGGATTGTCCAGGATTGTCGGGGACCCCCTaGCCTACCAGAGTGTGTATGTGGGTGGCTGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: SAQDCPGLSGTP*PTRVCMWVAVS Trigger: TGAAACAGCCACCCACATACACACTCTGGTAGGTCAGGGGGTCCCCGACAATCCTGGACAATCCTGAGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR GCA 72 bp | CCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATaGACAGCTAGAGAGGACATTGATTTGGGTTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: PGHGWRQEVGLG*TAREDIDLGWS Trigger: GCTCCAACCCAAATCAATGTCCTCTCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR CCA 72 bp | TTGGGATGCACAGCTAGAGAGGACATTGATTTGGGTTaGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LGCTAREDIDLG*SSVLWEVPTSS Trigger: AGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCTCTCTAGCTGTGCATCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR-3UTR CAA 90 bp | AACAGTCTGTACCATGGACCAGTAGCGAAGCAGGTAGGAGGGCAATGGGTCGTAACATCTGATCTCTGCTaGGATGCTGCTCTGCCATCG | + |
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Preference number: 3 (lower is better) Translates to: NSLYHGPVAKQVGGQWVVTSDLC*DAALPS Trigger: CGATGGCAGAGCAGCATCCAAGCAGAGATCAGATGT...TACGACCCATTGCCCTCCTACCTGCTTCGCTACTGGTCCATGGTACAGACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR TCA 72 bp | CTCTCTCTTCAGGGGAGTGAAACCTTCCCAGGGGTTTaGGTTTCCCTTTGGTTTGATGGGCATGGATGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LSLQGSETFPGV*VSLWFDGHGWS Trigger: GGACCATCCATGCCCATCAAACCAAAGGGAAACTCAAACCCCTGGGAAGGTTTCACTCCCCTGAAGAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR TCA 72 bp | TTAACCAATCCCACTGACAATCGCCCGCCCACAGACTaGAGAGGACATCTGATCTCTGCTTGGATGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: LTNPTDNRPPTD*RGHLISAWMLL Trigger: GAGCAGCATCCAAGCAGAGATCAGATGTCCTCTTCAGTCTGTGGGCGGGCGATTGTCAGTGGGATTGGTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR-3UTR CAA 90 bp | AACAGTCTGTACCATGGACCAGTAGCGAAGCAGGTAGGAGGGCAATGGGTCGTACCTCTGATTCTAGAATaGATCCTGGGCATGGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: NSLYHGPVAKQVGGQWVVPLILE*ILGMAG Trigger: TCCAGCCATGCCCAGGATCAATTCTAGAATCAGAGG...TACGACCCATTGCCCTCCTACCTGCTTCGCTACTGGTCCATGGTACAGACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR CCA 72 bp | TTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTaGGATGCACAGCTAGAGAGGACATTGATTTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: LILGMAGDKRWV*DAQLERTLIWV Trigger: AACCCAAATCAATGTCCTCTCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR TCA 72 bp | TTAATCAGGGATGAGAAAGAGGCGATGGGGGAGGGGTaGCTTTCTATTTCCACCGACCAGCGTTTGGGTATA | + |
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Preference number: 3 (lower is better) Translates to: LIRDEKEAMGEG*LSISTDQRLGI Trigger: TATACCCAAACGCTGGTCGGTGGAAATAGAAAGTCACCCCTCCCCCATCGCCTCTTTCTCATCCCTGATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR CCA 72 bp | CTAGAATTGATCCTGGGCATGGCTGGAGACAAGAGGTaGGTTTGGGATGCACAGCTAGAGAGGACATTGATT | + |
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Preference number: 3 (lower is better) Translates to: LELILGMAGDKR*VWDAQLERTLI Trigger: AATCAATGTCCTCTCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAATTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| 3UTR TCA 72 bp | AAAGAGAGATATGGCTCCTCTCTCTCTTCAGGGGAGTaGAACCTTCCCAGGGGTTTGAGTTTCCCTTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: KERYGSSLSSGE*NLPRGLSFPLV Trigger: AACCAAAGGGAAACTCAAACCCCTGGGAAGGTTTCACTCCCCTGAAGAGAGAGAGGAGCCATATCTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| 3UTR TCA 72 bp | TCACGACAAGACTCAAACTTCACTGTTAATCAGGGATaGGAAAGAGGCGATGGGGGAGGGGTGACTTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: SRQDSNFTVNQG*ERGDGGGVTFY Trigger: ATAGAAAGTCACCCCTCCCCCATCGCCTCTTTCTCATCCCTGATTAACAGTGAAGTTTGAGTCTTGTCGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| CDS-3UTR TCA 90 bp | TGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGGAGGGCGCGGGGTTGGCCTaGAAGGGCCCGCTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: WEVPTSSAQTCGWTELWEGAGLA*KGPLWL Trigger: GAGCCAGAGCGGGCCCTTTCAGGCCAACCCCGCGCC...CTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGGTGGAAGCGGCTGCTaGCCGGCATGCCCGCCACGC | + |
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Preference number: 4 (lower is better) Translates to: PVGGPHILCSNLWLDRALGGSGC*PACPPR Trigger: GCGTGGCGGGCATGCCGGCCAGCAGCCGCTTCCACC...CAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CCA 90 bp | CTGCCATCGCACACCTCACCAGAGACTCCACAGGGCCTCCTGGAGGTCTTGTCCGGTAGGGCGCGGGGTTaGCCTGAAAGGGCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHTSPETPQGLLEVLSGRARG*PERARS Trigger: AGAGCGGGCCCTTTCAGGCCAACCCCGCGCCCTACC...GGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGTGAGGTGTGCGATGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CCA 90 bp | CTGCCATCGCACACCTCACCAGAGACTCCACAGGGCCTCCTGGAGGTCTTGTCCAGGTCAGCATGCGGGTaGGCGAGCGCTCACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSHTSPETPQGLLEVLSRSACG*ASAHHL Trigger: GAGGTGGTGAGCGCTCGCCCACCCGCATGCTGACCT...GGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGTGAGGTGTGCGATGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGGAGCCACTGCCAGCTCTGTGTGGTGGAAGCGGCTaGTGGCCGGCATGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSAQTCGWTELWEPLPALCGGSG*WPACPP Trigger: TGGCGGGCATGCCGGCCAGCAGCCGCTTCCACCACA...CAGAGCTGGCAGTGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTATGTGGGTGGCTGTTTCAGGTGCAGGCAATGGGGAAGGCCAAGCACAACCATGCGGCCCGGCGTaGTCAGGGCCGTGGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCMWVAVSGAGNGEGQAQPCGPA*SGPWAS Trigger: ACTCGCCCACGGCCCTGAGCACGCCGGGCCGCATGG...TTGTGCTTGGCCTTCCCCATTGCCTGCACCTGAAACAGCCACCCACATACACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR GCA 90 bp | AGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCCATGCGGCCCGGCGTaGTCAGGGCCGTGGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLIWVGAVSCGRSPHPLPCGPA*SGPWAS Trigger: ACTCGCCCACGGCCCTGAGCACGCCGGGCCGCATGG...CAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTAGCCTCTGATTCTAGAGGTAGGGCGCGGGGTTaGCCTGAAAGGGCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPAKALPTQAGVASDSRGRARG*PERARS Trigger: AGAGCGGGCCCTTTCAGGCCAACCCCGCGCCCTACC...TCTAGAATCAGAGGCTACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR TCA 90 bp | ATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTAGAGGCGCGGGGTTGGCCTaGAAGGGCCCGCTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IDPGHGWRQEVGLGCTARGAGLA*KGPLWL Trigger: GAGCCAGAGCGGGCCCTTTCAGGCCAACCCCGCGCC...TCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR GCA 90 bp | GGATGGTCCCCAGGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGCCGTGGGCGAGTTaGTGTGGCTGCCGTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GWSPGQCVCVCVCVCVCVGPWAS*CGCRRL Trigger: AAGCCGACGGCAGCCACAGCAACTCGCCCACGGCCC...CACACACACACACACACACACACACACACACACACACTGCCCTGGGGACCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTAGCCTCTGATTCTAGACCGGGTAGTGCATCCTaGGGTCCGGGAAGCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPAKALPTQAGVASDSRPGSAS*GPGSGS Trigger: AGAGCCGCTTCCCGGACCCCAGGATGCACTACCCGG...TCTAGAATCAGAGGCTACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGTGGTGCCCGATGGTGTaGCGCTGTAGGGGAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLEQCPVGGPHILCSNLWWCPMV*RCRGRR Trigger: CCGCCTTCCCCTACAGCGCCACACCATCGGGCACCA...CCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | TTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAAGGTGGAAGCGGCTGCTaGCCGGCATGCCCGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LIWVGAVSCGRSPHPLLKGGSGC*PACPPR Trigger: GCGTGGCGGGCATGCCGGCCAGCAGCCGCTTCCACC...TTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGACACCGAAGCGCCGCTaGGGCAGGAGGTCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLEQCPVGGPHILCSNLWTPKRR*GRRSAC Trigger: GCATGCTGACCTCCTGCCCCAGCGGCGCTTCGGTGT...CCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGACTCCACAGGGCCTCCTGGAGGTCTTGTCCCCTTCTGTGAAGAATGTAGTGGCTCGTGGTGCTaGGAGAGCCACGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRDSTGPPGGLVPFCEECSGSWC*ESHGGW Trigger: CCAGCCCCCGTGGCTCTCTCAGCACCACGAGCCACT...ACATTCTTCACAGAAGGGGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR TCA 90 bp | GGCCAAAGTCTGTTTCTTCTTGTAGTCTCGGGCTGGAGGGAAGGATTCGGCTGGAGTGGCTCGTGGTGCTaGGAGAGCCACGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQSLFLLVVSGWREGFGWSGSWC*ESHGGW Trigger: CCAGCCCCCGTGGCTCTCTCAGCACCACGAGCCACT...CCAGCCGAATCCTTCCCTCCAGCCCGAGACTACAAGAAGAAACAGACTTTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGAGACTCCACAGGGCCTCCTGGAGGTCTTGTCCCCTTCTGTGAAGAATGTTGTGGTGGAAGCGGCTaGTGGCCGGCATGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRDSTGPPGGLVPFCEECCGGSG*WPACPP Trigger: TGGCGGGCATGCCGGCCAGCAGCCGCTTCCACCACA...ACATTCTTCACAGAAGGGGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR GCA 90 bp | GGCCAAAGTCTGTTTCTTCTTGTAGTCTCGGGCTGGAGGGAAGGATTCGGCTGGGGGCCGTGGGCGAGTTaGTGTGGCTGCCGTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQSLFLLVVSGWREGFGWGPWAS*CGCRRL Trigger: AAGCCGACGGCAGCCACAGCAACTCGCCCACGGCCC...CCAGCCGAATCCTTCCCTCCAGCCCGAGACTACAAGAAGAAACAGACTTTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGAAGGAGCGGTCAAACTaGCGGGGGTCGGAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVGGPHILCSNLWLDRALKERSN*RGSEKG Trigger: CCCCTTCTCCGACCCCCGCCAGTTTGACCGCTCCTT...CAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGGAGCCACTGCCAGCTCTTGGTGCCCGATGGTGTaGCGCTGTAGGGGAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILCSNLWLDRALGATASSWCPMV*RCRGRR Trigger: CCGCCTTCCCCTACAGCGCCACACCATCGGGCACCA...AGAGCTGGCAGTGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | GATTGTCGGGGACCCCCTGACCTACCAGAGTGTGTATGTGGGTGGCTGTTTCAGCTCCCGCGGCTGCCATaGAGAACTGGTAGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DCRGPPDLPECVCGWLFQLPRLP*RTGRSR Trigger: CCGGCTCCTACCAGTTCTCCATGGCAGCCGCGGGAG...CTGAAACAGCCACCCACATACACACTCTGGTAGGTCAGGGGGTCCCCGACAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CCA 90 bp | CCACTGCCAGCTCTGGCCCCTGGGACCAGGCCAAAGTCTGTTTCTTCTTGTAGTAGGTCAGCATGCGGGTaGGCGAGCGCTCACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLPALAPGTRPKSVSSCSRSACG*ASAHHL Trigger: GAGGTGGTGAGCGCTCGCCCACCCGCATGCTGACCT...ACTACAAGAAGAAACAGACTTTGGCCTGGTCCCAGGGGCCAGAGCTGGCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGTCCACGCCATCAGCCTaGCCCAGGCTGGGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LWEVPTSSAQTCGWTELWSTPSA*PRLGFM Trigger: CATGAACCCCAGCCTGGGCCAGGCTGATGGCGTGGA...CCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CCA 90 bp | TGGAACAGTCTGTACCATGGACCAGTAGCGAAGCAGGTAGGAGGGCAATGGGTCGCGTGCTCAGGGCCGTaGGCGAGTTGCTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WNSLYHGPVAKQVGGQWVACSGP*ASCCGC Trigger: GCAGCCACAGCAACTCGCCCACGGCCCTGAGCACGC...GACCCATTGCCCTCCTACCTGCTTCGCTACTGGTCCATGGTACAGACTGTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CCA 90 bp | GAGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCGTGCTCAGGGCCGTaGGCGAGTTGCTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EDIDLGWSSVLWEVPTSSACSGP*ASCCGC Trigger: GCAGCCACAGCAACTCGCCCACGGCCCTGAGCACGC...AGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCAAAGTCTGTTTCTTCTTGTAGTCTCGGGCTGGAGGGAAGGATTCGGCTGGGCTGCCCAGGCTGGTaGCCGATGGTGTGGCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPKSVSSCSLGLEGRIRLGCPGW*PMVWRC Trigger: ACAGCGCCACACCATCGGGCACCAGCCTGGGCAGCC...CAGCCGAATCCTTCCCTCCAGCCCGAGACTACAAGAAGAAACAGACTTTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGACCACCTCCCGCGGCTaGCATGGAGAACTGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVGGPHILCSNLWLDRALTTSRG*HGELVG Trigger: TCCTACCAGTTCTCCATGGCAGCCGCGGGAGGTGGT...CAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CCA 90 bp | CTCTTGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTAGCCTCTGATTCTAGAGGGGCTGGGTGTGCTTaGTGTTACACGCATGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPAKALPTQAGVASDSRGAGCA*CYTHAQ Trigger: CTGCGCATGCGTGTAACACCAAGCACACCCAGCCCC...TCTAGAATCAGAGGCTACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CCA 90 bp | GGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGGAGAGCCACGGGGGCTaGGTGTGCTTGGTGTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLEQCPVGGPHILCSNLWESHGG*VCLVLH Trigger: GTGTAACACCAAGCACACCCAGCCCCCGTGGCTCTC...CCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CCA 90 bp | CTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGCCTTGGATTGGGGTCTaGGCCTGGCTGCTGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWEVPTSSAQTCGWTELWPWIGV*AWLLKW Trigger: CCACTTCAGCAGCCAGGCCCAGACCCCAATCCAAGG...CCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CCA 90 bp | GAGTTTCCCTTTGGTTTGATGGGCATGGATGGTCCCCAGGGCAGTGTGTGTGTGCCGGGTAGTGCATCCTaGGGTCCGGGAAGCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFPFGLMGMDGPQGSVCVPGSAS*GPGSGS Trigger: AGAGCCGCTTCCCGGACCCCAGGATGCACTACCCGG...CACACACACACTGCCCTGGGGACCATCCATGCCCATCAAACCAAAGGGAAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| CDS-3UTR CCA 90 bp | CCACTGCCAGCTCTGGCCCCTGGGACCAGGCCAAAGTCTGTTTCTTCTTGTAGTCAGGCTGGTGCCCGATaGTGTGGCGCTGTAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPALAPGTRPKSVSSCSQAGAR*CGAVGE Trigger: TTCCCCTACAGCGCCACACCATCGGGCACCAGCCTG...ACTACAAGAAGAAACAGACTTTGGCCTGGTCCCAGGGGCCAGAGCTGGCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | CCACTGCCAGCTCTGGCCCCTGGGACCAGGCCAAAGTCTGTTTCTTCTTGTAGTTCCACGCCATCAGCCTaGCCCAGGCTGGGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLPALAPGTRPKSVSSCSSTPSA*PRLGFM Trigger: CATGAACCCCAGCCTGGGCCAGGCTGATGGCGTGGA...ACTACAAGAAGAAACAGACTTTGGCCTGGTCCCAGGGGCCAGAGCTGGCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | GATGGTCCCCAGGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCGAGTTGCTGTaGCTGCCGTCGGCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: DGPQGSVCVCVCVCVCVCVGELL*LPSAST Trigger: CGTGGAAGCCGACGGCAGCCACAGCAACTCGCCCAC...ACACACACACACACACACACACACACACACACACACACTGCCCTGGGGACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CCA 90 bp | GGCATGGATGGTCCCCAGGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGCCACGGGGGCTaGGTGTGCTTGGTGTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GMDGPQGSVCVCVCVCVCESHGG*VCLVLH Trigger: GTGTAACACCAAGCACACCCAGCCCCCGTGGCTCTC...ACACACACACACACACACACACACACACACACTGCCCTGGGGACCATCCATGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CCA 90 bp | AGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGAAGGAGCGGTCAAACTaGCGGGGGTCGGAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLIWVGAVSCGRSPHPLKERSN*RGSEKG Trigger: CCCCTTCTCCGACCCCCGCCAGTTTGACCGCTCCTT...CAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | GAATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTACTCCCGCGGCTGCCATaGAGAACTGGTAGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ELILGMAGDKRWVWDAQLLPRLP*RTGRSR Trigger: CCGGCTCCTACCAGTTCTCCATGGCAGCCGCGGGAG...TAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | ATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTAGAACACCGAAGCGCCGCTaGGGCAGGAGGTCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: IDPGHGWRQEVGLGCTARTPKRR*GRRSAC Trigger: GCATGCTGACCTCCTGCCCCAGCGGCGCTTCGGTGT...TCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | ATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTAGAGTGGGCGAGTTGCTGTaGCTGCCGTCGGCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: IDPGHGWRQEVGLGCTARVGELL*LPSAST Trigger: CGTGGAAGCCGACGGCAGCCACAGCAACTCGCCCAC...TCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAAAGTCTGTTTCTTCTTGTAGTCTCGGGCTGGAGGGAAGGATTCGGCTGGTCTTCCCTCGCCCACTaGGGCCCACGAATCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQSLFLLVVSGWREGFGWSSLAH*GPRIEG Trigger: ACCTTCGATTCGTGGGCCGCAGTGGGCGAGGGAAGA...CCAGCCGAATCCTTCCCTCCAGCCCGAGACTACAAGAAGAAACAGACTTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGGAGGTCCCCACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGGGAAGGCCTTGGTCTaGTCTTCTATCTTCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVGGPHILCSNLWLDRALGKALV*SSIFCR Trigger: CCGGCAGAAGATAGAAGACCAGACCAAGGCCTTCCC...CAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTGGGGACCTCCCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | GAGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTAGGTCTGAGGAGCCTTaGATTGGGGTCTGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDIDLGWSSVLWEVPTSSRSEEP*IGVWAW Trigger: CCAGGCCCAGACCCCAATCCAAGGCTCCTCAGACCT...AGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | AGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGAGGTCTGAGGAGCCTTaGATTGGGGTCTGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLIWVGAVSCGRSPHPLRSEEP*IGVWAW Trigger: CCAGGCCCAGACCCCAATCCAAGGCTCCTCAGACCT...CAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| 3UTR CAA 72 bp | CCCGCCCACAGACTGAAGAGGACATCTGATCTCTGCTaGGATGCTGCTCTGCCATCGCACACCTCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAHRLKRTSDLC*DAALPSHTSPE Trigger: CTCTGGTGAGGTGTGCGATGGCAGAGCAGCATCCAAGCAGAGATCAGATGTCCTCTTCAGTCTGTGGGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGACTCCACAGGGCCTCCTGGAGGTCTTGTCCCCTTCTGTGAAGAATGTGAAGGGGTTCAGGTCTaGGGAGCCTTGGATTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRDSTGPPGGLVPFCEECEGVQV*GALDWG Trigger: ACCCCAATCCAAGGCTCCTCAGACCTGAACCCCTTC...ACATTCTTCACAGAAGGGGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR GCA 90 bp | TTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAATCTTCCCTCGCCCACTaGGGCCCACGAATCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIWVGAVSCGRSPHPLLKSSLAH*GPRIEG Trigger: ACCTTCGATTCGTGGGCCGCAGTGGGCGAGGGAAGA...TTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGGGAGGGAGAGAAAGTCCAGACATCTCTGAGCCTGAGCTTCTCTCACGGGGGCTGGGTGTaGTTGGTGTTACACGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EREREGEKVQTSLSLSFSHGGWV*LVLHAC Trigger: GCATGCGTGTAACACCAAGCACACCCAGCCCCCGTG...AGAGAAGCTCAGGCTCAGAGATGTCTGGACTTTCTCTCCCTCCCTCTCTCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR GCA 90 bp | GAATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTACACGGGGGCTGGGTGTaGTTGGTGTTACACGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ELILGMAGDKRWVWDAQLHGGWV*LVLHAC Trigger: GCATGCGTGTAACACCAAGCACACCCAGCCCCCGTG...TAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTCTGTACCATGGACCAGTAGCGAAGCAGGTAGGAGGGCAATGGGTCGTAGGGGCTGGGTGTGCTTaGTGTTACACGCATGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLYHGPVAKQVGGQWVVGAGCA*CYTHAQ Trigger: CTGCGCATGCGTGTAACACCAAGCACACCCAGCCCC...TACGACCCATTGCCCTCCTACCTGCTTCGCTACTGGTCCATGGTACAGACTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CCA 90 bp | TTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAACCTTGGATTGGGGTCTaGGCCTGGCTGCTGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIWVGAVSCGRSPHPLLKPWIGV*AWLLKW Trigger: CCACTTCAGCAGCCAGGCCCAGACCCCAATCCAAGG...TTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| 3UTR CAA 72 bp | AGAGAAAGTCCAGACATCTCTGAGCCTGAGCTTCTCTaGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RESPDISEPELL*PAKALPTQAGV Trigger: TACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAGAAGCTCAGGCTCAGAGATGTCTGGACTTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| 3UTR CAA 72 bp | ACCTCACCAGAGACTCCACAGGGCCTCCTGGAGGTCTaGTCCCCTTCTGTGAAGAATGTGAAGTCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TSPETPQGLLEV*SPSVKNVKSGP Trigger: GGGTCCTGACTTCACATTCTTCACAGAAGGGGACAAGACCTCCAGGAGGCCCTGTGGAGTCTCTGGTGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| 3UTR CAA 72 bp | GTGGGTTTGGGATGCACAGCTAGAGAGGACATTGATTaGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VGLGCTAREDID*GWSSVLWEVPT Trigger: TGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCTCTCTAGCTGTGCATCCCAAACCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CCA 90 bp | TTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAAGGGAAGGCCTTGGTCTaGTCTTCTATCTTCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LIWVGAVSCGRSPHPLLKGKALV*SSIFCR Trigger: CCGGCAGAAGATAGAAGACCAGACCAAGGCCTTCCC...TTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | AGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGGGTCGGGGAAGGCCTTaGTCTGGTCTTCTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLIWVGAVSCGRSPHPLGRGRP*SGLLSS Trigger: AGAAGATAGAAGACCAGACCAAGGCCTTCCCCGACC...CAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| 3UTR CAA 72 bp | GTGAAACCTTCCCAGGGGTTTGAGTTTCCCTTTGGTTaGATGGGCATGGATGGTCCCCAGGGCAGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKPSQGFEFPFG*MGMDGPQGSVC Trigger: ACACACACTGCCCTGGGGACCATCCATGCCCATCAAACCAAAGGGAAACTCAAACCCCTGGGAAGGTTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| 3UTR CAA 72 bp | TTGGTTCAAAGTTGTCTGCTTCTAGGGACAAACAAGTaGGGAGCAGGACTGTGGCCTGGGAGGCAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVQSCLLLGTNK*GAGLWPGRQGP Trigger: TGGGCCTTGCCTCCCAGGCCACAGTCCTGCTCCCAACTTGTTTGTCCCTAGAAGCAGACAACTTTGAACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR TCA 90 bp | GAATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTACGAATCGAAGGTCGTTaGACCTGGCCACTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELILGMAGDKRWVWDAQLRIEGR*TWPLGS Trigger: AGAACCAAGTGGCCAGGTTCAACGACCTTCGATTCG...TAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | TTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCTCAAAGGTCGGGGAAGGCCTTaGTCTGGTCTTCTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIWVGAVSCGRSPHPLLKGRGRP*SGLLSS Trigger: AGAAGATAGAAGACCAGACCAAGGCCTTCCCCGACC...TTTGAGCAGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCCTCTGATTCTAGAATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTCGAATCGAAGGTCGTTaGACCTGGCCACTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VASDSRIDPGHGWRQEVGRIEGR*TWPLGS Trigger: AGAACCAAGTGGCCAGGTTCAACGACCTTCGATTCG...ACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAATTCTAGAATCAGAGGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CCA 90 bp | ATACCTCAGGGTAACAATGTCACAAAGGATGACACCCACCCACACAATTACAGTCAGGCTGGTGCCCGATaGTGTGGCGCTGTAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPQGNNVTKDDTHPHNYSQAGAR*CGAVGE Trigger: TTCCCCTACAGCGCCACACCATCGGGCACCAGCCTG...ACTGTAATTGTGTGGGTGGGTGTCATCCTTTGTGACATTGTTACCCTGAGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CCA 90 bp | GGCCAAAGTCTGTTTCTTCTTGTAGTCTCGGGCTGGAGGGAAGGATTCGGCTGGGTCTCGTATGAAGGTTaGTGTATAGTTGGGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQSLFLLVVSGWREGFGWVSYEG*CIVGEG Trigger: TCCTTCCCCAACTATACACCAACCTTCATACGAGAC...CCAGCCGAATCCTTCCCTCCAGCCCGAGACTACAAGAAGAAACAGACTTTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| 3UTR CAA 72 bp | ATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTaGGGATGCACAGCTAGAGAGGACATTGATTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDPGHGWRQEVG*GCTAREDIDLG Trigger: ACCCAAATCAATGTCCTCTCTAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| 3UTR CAA 72 bp | CAAAGGATGACACCCACCCACACAATTACAGTAACATaGTATCAACCCCCTAGGTTCCTTGTGCTTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRMTPTHTITVT*YQPPRFLVLSV Trigger: GACAGAAAGCACAAGGAACCTAGGGGGTTGATACAATGTTACTGTAATTGTGTGGGTGGGTGTCATCCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| 3UTR CAA 72 bp | ACTGCCCCCTGTTTTAGATGCTTGACTGAGATGCTTTaGGTTCAAAGTTGTCTGCTTCTAGGGACAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAPCFRCLTEML*VQSCLLLGTNK Trigger: CTTGTTTGTCCCTAGAAGCAGACAACTTTGAACCAAAAGCATCTCAGTCAAGCATCTAAAACAGGGGGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS GCA 90 bp | CGGCCTCGTCCATGCGGCCCGGCGTGCTCAGGGCCGTGGGCGAGTTaGTGTGGCTGCCGTCGGCTTCCACGCCATCAGCCTGGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPRPCGPACSGPWAS*CGCRRLPRHQPGPG Trigger: GCCTGGGCCAGGCTGATGGCGTGGAAGCCGACGGCAGCCACAGCAACTCGCCCACGGCCCTGAGCACGCCGGGCCGCATGGACGAGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 90 bp | TCGTCCATGCGGCCCGGCGTGCTCAGGGCCGTGGGCGAGTTGCTGTaGCTGCCGTCGGCTTCCACGCCATCAGCCTGGCCCAGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSMRPGVLRAVGELL*LPSASTPSAWPRLG Trigger: CCCCAGCCTGGGCCAGGCTGATGGCGTGGAAGCCGACGGCAGCCACAGCAACTCGCCCACGGCCCTGAGCACGCCGGGCCGCATGGACGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS GCA 90 bp | TGTGGTGGAAGCGGCTGCTGGCCGGCATGCCCGCCACGCTCAGGCTaGCCAGGCTGGTGCCCGATGGTGTGGCGCTGTAGGGGAAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CGGSGCWPACPPRSG*PGWCPMVWRCRGRR Trigger: CCGCCTTCCCCTACAGCGCCACACCATCGGGCACCAGCCTGGGCAGCCTGAGCGTGGCGGGCATGCCGGCCAGCAGCCGCTTCCACCACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 90 bp | GGCCGGCATGCCCGCCACGCTCAGGCTGCCCAGGCTGGTGCCCGATaGTGTGGCGCTGTAGGGGAAGGCGGCAGACATGGCTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GRHARHAQAAQAGAR*CGAVGEGGRHGSRV Trigger: TACCCGGGAGCCATGTCTGCCGCCTTCCCCTACAGCGCCACACCATCGGGCACCAGCCTGGGCAGCCTGAGCGTGGCGGGCATGCCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 90 bp | GCATGCCCGCCACGCTCAGGCTGCCCAGGCTGGTGCCCGATGGTGTaGCGCTGTAGGGGAAGGCGGCAGACATGGCTCCCGGGTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ACPPRSGCPGWCPMV*RCRGRRQTWLPGSA Trigger: TGCACTACCCGGGAGCCATGTCTGCCGCCTTCCCCTACAGCGCCACACCATCGGGCACCAGCCTGGGCAGCCTGAGCGTGGCGGGCATGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 90 bp | CTGCTGACACCGAAGCGCCGCTGGGGCAGGAGGTCAGCATGCGGGTaGGCGAGCGCTCACCACCTCCCGCGGCTGCCATGGAGAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLTPKRRWGRRSACG*ASAHHLPRLPWRTG Trigger: ACCAGTTCTCCATGGCAGCCGCGGGAGGTGGTGAGCGCTCGCCCACCCGCATGCTGACCTCCTGCCCCAGCGGCGCTTCGGTGTCAGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS TCA 90 bp | CACGCCATCAGCCTGGCCCAGGCTGGGGTTCATGAGGTTGCCTGCTaGCACCGAAGCGCCGCTGGGGCAGGAGGTCAGCATGCGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HAISLAQAGVHEVAC*HRSAAGAGGQHAGG Trigger: CCCACCCGCATGCTGACCTCCTGCCCCAGCGGCGCTTCGGTGTCAGCAGGCAACCTCATGAACCCCAGCCTGGGCCAGGCTGATGGCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 90 bp | GGCTGGTGCCCGATGGTGTGGCGCTGTAGGGGAAGGCGGCAGACATaGCTCCCGGGTAGTGCATCCTGGGGTCCGGGAAGCGGCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GWCPMVWRCRGRRQT*LPGSASWGPGSGSL Trigger: CAGAGAGCCGCTTCCCGGACCCCAGGATGCACTACCCGGGAGCCATGTCTGCCGCCTTCCCCTACAGCGCCACACCATCGGGCACCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 90 bp | GAAGTGGCTCGTGGTGCTGAGAGAGCCACGGGGGCTGGGTGTGCTTaGTGTTACACGCATGCGCAGGTCTCCAAAGCGGTCGGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EVARGAERATGAGCA*CYTHAQVSKAVGEG Trigger: GCCTTCCCCGACCGCTTTGGAGACCTGCGCATGCGTGTAACACCAAGCACACCCAGCCCCCGTGGCTCTCTCAGCACCACGAGCCACTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 90 bp | GTGTTACACGCATGCGCAGGTCTCCAAAGCGGTCGGGGAAGGCCTTaGTCTGGTCTTCTATCTTCTGCCGGTGCCGTCGGGGTTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLHACAGLQSGRGRP*SGLLSSAGAVGVPG Trigger: CCCGGGAACCCCGACGGCACCGGCAGAAGATAGAAGACCAGACCAAGGCCTTCCCCGACCGCTTTGGAGACCTGCGCATGCGTGTAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 90 bp | CGGCTCTCTGTGAGGCTCTGCAGCGTAGGGAAGGAGCGGTCAAACTaGCGGGGGTCGGAGAAGGGGTTCAGGTCTGAGGAGCCTTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: RLSVRLCSVGKERSN*RGSEKGFRSEEPWI Trigger: AATCCAAGGCTCCTCAGACCTGAACCCCTTCTCCGACCCCCGCCAGTTTGACCGCTCCTTCCCTACGCTGCAGAGCCTCACAGAGAGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CAA 90 bp | CACATCCTCTGCTCAAACTTGTGGCTGGACAGAGCTCTGGGAGCCACTGCCAGCCTGAGGAGCCTTGGATaGGGGTCTGGGCCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HILCSNLWLDRALGATASLRSLG*GSGPGC Trigger: GCAGCCAGGCCCAGACCCCAATCCAAGGCTCCTCAG...GCTGGCAGTGGCTCCCAGAGCTCTGTCCAGCCACAAGTTTGAGCAGAGGATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CAA 90 bp | CCTGAGCTTCTCTTGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTAGCCTCTGCCACTTGGGTAGGGTaGGTGAACACGGTGATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PELLLPAKALPTQAGVASATWVG*VNTVIV Trigger: CACAATCACCGTGTTCACCAACCCTACCCAAGTGGC...AGAGGCTACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAGAAGCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTCCCTTTGGTTTGATGGGCATGGATGGTCCCCAGGGCAGTGTGTGTGTGCTGAGGAGCCTTGGATaGGGGTCTGGGCCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EFPFGLMGMDGPQGSVCVLRSLG*GSGPGC Trigger: GCAGCCAGGCCCAGACCCCAATCCAAGGCTCCTCAG...CACACACACACTGCCCTGGGGACCATCCATGCCCATCAAACCAAAGGGAAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| CDS-3UTR CAA 90 bp | CCTGAGCTTCTCTTGCCAGCAAAGGCCCTCCCCACACAGGCAGGGGTAGCCTCTACGAATCGAAGGTCGTaGAACCTGGCCACTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PELLLPAKALPTQAGVASTNRRS*NLATWF Trigger: GAACCAAGTGGCCAGGTTCAACGACCTTCGATTCGT...AGAGGCTACCCCTGCCTGTGTGGGGAGGGCCTTTGCTGGCAAGAGAAGCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CAA 90 bp | GATGGTCCCCAGGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGGCTGGGTGTGCTaGGTGTTACACGCATGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: DGPQGSVCVCVCVCVCVCGGWVC*VLHACA Trigger: TGCGCATGCGTGTAACACCAAGCACACCCAGCCCCC...ACACACACACACACACACACACACACACACACACACACTGCCCTGGGGACCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
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| CDS-3UTR CAA 90 bp | GGCCAAAGTCTGTTTCTTCTTGTAGTCTCGGGCTGGAGGGAAGGATTCGGCTGGGGGGGCTGGGTGTGCTaGGTGTTACACGCATGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQSLFLLVVSGWREGFGWGGWVC*VLHACA Trigger: TGCGCATGCGTGTAACACCAAGCACACCCAGCCCCC...CCAGCCGAATCCTTCCCTCCAGCCCGAGACTACAAGAAGAAACAGACTTTGGCC 59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS-3UTR CAA 90 bp | GAGGACATTGATTTGGGTTGGAGCAGTGTCCTGTGGGAGGTCCCCACATCCTCTGCCACTTGGGTAGGGTaGGTGAACACGGTGATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EDIDLGWSSVLWEVPTSSATWVG*VNTVIV Trigger: CACAATCACCGTGTTCACCAACCCTACCCAAGTGGC...AGAGGATGTGGGGACCTCCCACAGGACACTGCTCCAACCCAAATCAATGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACAGTCTGTACCATGGACCAGTAGCGAAGCAGGTAGGAGGGCAATGGGTCGTGGTAGGTAGCCACTaGGGTAGGGTTGGTGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: WNSLYHGPVAKQVGGQWVVVGSH*GRVGEH Trigger: GTGTTCACCAACCCTACCCAAGTGGCTACCTACCAC...GACCCATTGCCCTCCTACCTGCTTCGCTACTGGTCCATGGTACAGACTGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056977.14 |
||
| CDS-3UTR CAA 90 bp | GAATTGATCCTGGGCATGGCTGGAGACAAGAGGTGGGTTTGGGATGCACAGCTAACGAATCGAAGGTCGTaGAACCTGGCCACTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELILGMAGDKRWVWDAQLTNRRS*NLATWF Trigger: GAACCAAGTGGCCAGGTTCAACGACCTTCGATTCGT...TAGCTGTGCATCCCAAACCCACCTCTTGTCTCCAGCCATGCCCAGGATCAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS CAA 72 bp | GCCTGCGCGCTTAGCGCGCCGCTGTTCTCGCCCATCTaGCCGCCGCCGCCGCCGCCGCAGGGGAAGGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: ACALSAPLFSPI*PPPPPPQGKAV Trigger: CACGGCCTTCCCCTGCGGCGGCGGCGGCGGCGGCAAGATGGGCGAGAACAGCGGCGCGCTAAGCGCGCAGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS CCA 72 bp | CCGAAGCGCCGCTGGGGCAGGAGGTCAGCATGCGGGTaGGCGAGCGCTCACCACCTCCCGCGGCTGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PKRRWGRRSACG*ASAHHLPRLPW Trigger: CCATGGCAGCCGCGGGAGGTGGTGAGCGCTCGCCCACCCGCATGCTGACCTCCTGCCCCAGCGGCGCTTCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS CCA 72 bp | CGGCCCGGCGTGCTCAGGGCCGTGGGCGAGTTGCTGTaGCTGCCGTCGGCTTCCACGCCATCAGCCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPGVLRAVGELL*LPSASTPSAWP Trigger: GGGCCAGGCTGATGGCGTGGAAGCCGACGGCAGCCACAGCAACTCGCCCACGGCCCTGAGCACGCCGGGCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS GCA 72 bp | CCGGCATGCCCGCCACGCTCAGGCTGCCCAGGCTGGTaGCCGATGGTGTGGCGCTGTAGGGGAAGGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PACPPRSGCPGW*PMVWRCRGRRQ Trigger: CTGCCGCCTTCCCCTACAGCGCCACACCATCGGGCACCAGCCTGGGCAGCCTGAGCGTGGCGGGCATGCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS GCA 72 bp | AGCGGCTGCTGGCCGGCATGCCCGCCACGCTCAGGCTaGCCAGGCTGGTGCCCGATGGTGTGGCGCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGCWPACPPRSG*PGWCPMVWRCR Trigger: CCTACAGCGCCACACCATCGGGCACCAGCCTGGGCAGCCTGAGCGTGGCGGGCATGCCGGCCAGCAGCCGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS GCA 72 bp | CTGACACCGAAGCGCCGCTGGGGCAGGAGGTCAGCATaGGGGTGGGCGAGCGCTCACCACCTCCCGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTPKRRWGRRSA*GWASAHHLPRL Trigger: CAGCCGCGGGAGGTGGTGAGCGCTCGCCCACCCGCATGCTGACCTCCTGCCCCAGCGGCGCTTCGGTGTCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS GCA 72 bp | CCATGCGGCCCGGCGTGCTCAGGGCCGTGGGCGAGTTaGTGTGGCTGCCGTCGGCTTCCACGCCATCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PCGPACSGPWAS*CGCRRLPRHQP Trigger: AGGCTGATGGCGTGGAAGCCGACGGCAGCCACAGCAACTCGCCCACGGCCCTGAGCACGCCGGGCCGCATGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
||
| CDS CCA 72 bp | GCCCGCCACGCTCAGGCTGCCCAGGCTGGTGCCCGATaGTGTGGCGCTGTAGGGGAAGGCGGCAGACATGGC | + |
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Preference number: 6 (lower is better) Translates to: ARHAQAAQAGAR*CGAVGEGGRHG Trigger: GCCATGTCTGCCGCCTTCCCCTACAGCGCCACACCATCGGGCACCAGCCTGGGCAGCCTGAGCGTGGCGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 72 bp | CCGATGGTGTGGCGCTGTAGGGGAAGGCGGCAGACATaGCTCCCGGGTAGTGCATCCTGGGGTCCGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PMVWRCRGRRQT*LPGSASWGPGS Trigger: GCTTCCCGGACCCCAGGATGCACTACCCGGGAGCCATGTCTGCCGCCTTCCCCTACAGCGCCACACCATCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS GCA 72 bp | ATCCTGGGGTCCGGGAAGCGGCTCTCTGTGAGGCTCTaGAGCGTAGGGAAGGAGCGGTCAAACTGGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: ILGSGKRLSVRL*SVGKERSNWRG Trigger: CCCCCGCCAGTTTGACCGCTCCTTCCCTACGCTGCAGAGCCTCACAGAGAGCCGCTTCCCGGACCCCAGGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS GCA 72 bp | AGCCACGGGGGCTGGGTGTGCTTGGTGTTACACGCATaGGCAGGTCTCCAAAGCGGTCGGGGAAGGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SHGGWVCLVLHA*AGLQSGRGRPW Trigger: CCAAGGCCTTCCCCGACCGCTTTGGAGACCTGCGCATGCGTGTAACACCAAGCACACCCAGCCCCCGTGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 72 bp | TTGCTGTGGCTGCCGTCGGCTTCCACGCCATCAGCCTaGCCCAGGCTGGGGTTCATGAGGTTGCCTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLWLPSASTPSA*PRLGFMRLPAD Trigger: GTCAGCAGGCAACCTCATGAACCCCAGCCTGGGCCAGGCTGATGGCGTGGAAGCCGACGGCAGCCACAGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CCA 72 bp | GCATGCGCAGGTCTCCAAAGCGGTCGGGGAAGGCCTTaGTCTGGTCTTCTATCTTCTGCCGGTGCCGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: ACAGLQSGRGRP*SGLLSSAGAVG Trigger: CCCGACGGCACCGGCAGAAGATAGAAGACCAGACCAAGGCCTTCCCCGACCGCTTTGGAGACCTGCGCATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CAA 72 bp | CGCATGCGCAGGTCTCCAAAGCGGTCGGGGAAGGCCTaGGTCTGGTCTTCTATCTTCTGCCGGTGCCGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RMRRSPKRSGKA*VWSSIFCRCRR Trigger: CCGACGGCACCGGCAGAAGATAGAAGACCAGACCAAGGCCTTCCCCGACCGCTTTGGAGACCTGCGCATGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CAA 90 bp | GGTGTTACACGCATGCGCAGGTCTCCAAAGCGGTCGGGGAAGGCCTaGGTCTGGTCTTCTATCTTCTGCCGGTGCCGTCGGGGTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GVTRMRRSPKRSGKA*VWSSIFCRCRRGSR Trigger: CCGGGAACCCCGACGGCACCGGCAGAAGATAGAAGACCAGACCAAGGCCTTCCCCGACCGCTTTGGAGACCTGCGCATGCGTGTAACACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS GCA 72 bp | AAGCGTTGCGCAGCTCGGCGGAGTAGTTCTCATCATTaGCGGCCATCACGGTCACCACCGTTCCATCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: KRCAARRSSSHH*RPSRSPPFHPA Trigger: TGCCGGATGGAACGGTGGTGACCGTGATGGCCGGCAATGATGAGAACTACTCCGCCGAGCTGCGCAACGCTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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| CDS CAA 72 bp | CACAGTGACCTTGATGGCTCGGTGGTAGGTAGCCACTaGGGTAGGGTTGGTGAACACGGTGATTGTGAGCGT | + |
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Preference number: 6 (lower is better) Translates to: HSDLDGSVVGSH*GRVGEHGDCER Trigger: ACGCTCACAATCACCGTGTTCACCAACCCTACCCAAGTGGCTACCTACCACCGAGCCATCAAGGTCACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056977.14 ENSMUST00000119564.2 |
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