Pregenerated sensors for RUNX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022952Ensembl transcript IDs: ENSMUST00000023673.14, ENSMUST00000113956.10, ENSMUST00000168195.8, ENSMUST00000186296.2, ENSMUST00000187242.3
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTaGATGGACGGCAGGCCCAGTCCCTCGATGGCGATGGCGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: GILPGGLQGPSWRGL*MDGRPSPSMAMALS Trigger: GCTGAGCGCCATCGCCATCGAGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR CCA 90 bp | CAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTaGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCTCGATGGCG | + |
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Preference number: 1 (lower is better) Translates to: QFPSGILPGGLQGPS*RGLCMDGRPSPSMA Trigger: CGCCATCGAGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR CCA 90 bp | GCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTaGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAG | + |
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Preference number: 1 (lower is better) Translates to: AKSEAFTVSLRDSSW*PPRALLAGSVHGRQ Trigger: CTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR CCA 90 bp | ATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTaGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGG | + |
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Preference number: 1 (lower is better) Translates to: IAKSEAFTVSLRDSS*WPPRALLAGSVHGR Trigger: CCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR GCA 90 bp | CCTCAGCGACTGTGTGCAGTGAGCAGGTGCAGTGCCGTGAGTACCTaGTGGCCTGGGCTACTGAGAATCGTTCTGGGACATTCTCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: PQRLCAVSRCSAVST*WPGLLRIVLGHSLL Trigger: TAAGAGAGAATGTCCCAGAACGATTCTCAGTAGCCCAGGCCAGCAGGTACTCACGGCACTGCACCTGCTCACTGCACACAGTCGCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR CCA 90 bp | CAGCGACTGTGTGCAGTGAGCAGGTGCAGTGCCGTGAGTACCTGCTaGCCTGGGCTACTGAGAATCGTTCTGGGACATTCTCTCTTATCT | + |
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Preference number: 1 (lower is better) Translates to: QRLCAVSRCSAVSTC*PGLLRIVLGHSLLS Trigger: AGATAAGAGAGAATGTCCCAGAACGATTCTCAGTAGCCCAGGCCAGCAGGTACTCACGGCACTGCACCTGCTCACTGCACACAGTCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR CCA 90 bp | ACTGTGTGCAGTGAGCAGGTGCAGTGCCGTGAGTACCTGCTGGCCTaGGCTACTGAGAATCGTTCTGGGACATTCTCTCTTATCTATGTG | + |
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Preference number: 1 (lower is better) Translates to: TVCSEQVQCREYLLA*ATENRSGTFSLIYV Trigger: CACATAGATAAGAGAGAATGTCCCAGAACGATTCTCAGTAGCCCAGGCCAGCAGGTACTCACGGCACTGCACCTGCTCACTGCACACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR GCA 90 bp | GTTATGCAAACTCAAGTGCACACTGGCACGAATCAGACAGCAGAGTaGAAACACTCCACGCCTTGGGGAAACAGTCCATTGTTCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VMQTQVHTGTNQTAE*KHSTPWGNSPLFLR Trigger: CCTGAGGAACAATGGACTGTTTCCCCAAGGCGTGGAGTGTTTGCACTCTGCTGTCTGATTCGTGCCAGTGTGCACTTGAGTTTGCATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
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| 3UTR CCA 90 bp | CTCAGCCAACGGGTTGTGATCCTCAAGAGTTTTTGCTGCAGTATCTaGACAGAAAGCAGACCCAAAATGGCTGGCAACGCCTCTGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LSQRVVILKSFCCSI*TESRPKMAGNASVL Trigger: CAGAACAGAGGCGTTGCCAGCCATTTTGGGTCTGCTTTCTGTCCAGATACTGCAGCAAAAACTCTTGAGGATCACAACCCGTTGGCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR TCA 90 bp | GAGGAGGAAGGTATGGCTGATATGAAGATCTATTCTGAGTTTCTCTaGATCCTGCTAGCGCTCTTCTCCAGACAAGAGCAACCTGGTATC | + |
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Preference number: 1 (lower is better) Translates to: EEEGMADMKIYSEFL*ILLALFSRQEQPGI Trigger: GATACCAGGTTGCTCTTGTCTGGAGAAGAGCGCTAGCAGGATTCAGAGAAACTCAGAATAGATCTTCATATCAGCCATACCTTCCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR CAA 90 bp | AAAAGAGGCAGAAGGAGAGACACCCCTTCCGGTCCCAGCGTGCGTTaGTCTGCGCAGGACGTTTGGGCAGCAGCACAGCTGCTCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: KRGRRRDTPSGPSVR*SAQDVWAAAQLLSQ Trigger: TTGGCTGAGCAGCTGTGCTGCTGCCCAAACGTCCTGCGCAGACAAACGCACGCTGGGACCGGAAGGGGTGTCTCTCCTTCTGCCTCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR-3UTR TCA 90 bp | AAGGGGCAGCTTCTGAGGAGCATCCTGCACAGGTGGGCGTGGCATCTGCCTCCCTCCTTGGCACCTCTCTaGACCCTTTCAGGACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KGQLLRSILHRWAWHLPPSLAPL*TLSGQS Trigger: ACTCTGTCCTGAAAGGGTTCAGAGAGGTGCCAAGGA...GGGAGGCAGATGCCACGCCCACCTGTGCAGGATGCTCCTCAGAAGCTGCCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR-3UTR CCA 90 bp | GAAATAAGAAATAGATGCCAAACAGGATGGGCTGCGTCTTCCCCACCCCGAACCCTCCGGGATTCTTCCTaGTGGCCTCCAAGGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: EIRNRCQTGWAASSPPRTLRDSS*WPPRAL Trigger: GAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAG...GGTTCGGGGTGGGGAAGACGCAGCCCATCCTGTTTGGCATCTATTTCTTATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTTACTTGGTTGAGCTCTGTGATAAAGCATGCCAGAATGAGGAGGCCTTGCGGGATTCTTCCTGGTaGCCTCCAAGGGCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TAYLVELCDKACQNEEALRDSSW*PPRALL Trigger: CAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCG...CAAGGCCTCCTCATTCTGGCATGCTTTATCACAGAGCTCAACCAAGTAAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR CAA 90 bp | GCACACTGGCACGAATCAGACAGCAGAGTGCAAACACTCCACGCCTaGGGGAAACAGTCCATTGTTCCTCAGGTAAACACCAGCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: AHWHESDSRVQTLHA*GKQSIVPQVNTSTS Trigger: AGAGGTGCTGGTGTTTACCTGAGGAACAATGGACTGTTTCCCCAAGGCGTGGAGTGTTTGCACTCTGCTGTCTGATTCGTGCCAGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGGTTATGCAAACTCAAGTGCACACTGGCACGAATCAGACAGCAGAGTGCAAACACTCCACGCCTTaGGGAAACAGTCCATTGTTC | + |
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Preference number: 2 (lower is better) Translates to: GAVMQTQVHTGTNQTAECKHSTP*GNSPLF Trigger: GAACAATGGACTGTTTCCCCAAGGCGTGGAGTGTTT...GCACTCTGCTGTCTGATTCGTGCCAGTGTGCACTTGAGTTTGCATAACCGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGTCCTGGCGGGGTCTGTaGATGGACGGCAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: FLLFTALLNQKHSQFPSGSWRGL*MDGRPS Trigger: ACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGA...CCCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGGTTTGGGTCTATGTAAATACTATGTAAGTAAACCCCTGACCAACAGCTTATCCTGGCGGGGTCTGTaGATGGACGGCAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SGLGLCKYYVSKPLTNSLSWRGL*MDGRPS Trigger: ACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGA...TAAGCTGTTGGTCAGGGGTTTACTTACATAGTATTTACATAGACCCAAACCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTTGCTGCAGTATCTGGACAGAAAGCAGACCCAAAATGGCTGGCAACGCCGAGGGAAAAGAAAAGTaGGAAGGGCTATTGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SFCCSIWTESRPKMAGNAEGKEK*EGLLGG Trigger: TCCTCCCAATAGCCCTTCTCACTTTTCTTTTCCCTC...GGCGTTGCCAGCCATTTTGGGTCTGCTTTCTGTCCAGATACTGCAGCAAAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR-3UTR CCA 90 bp | CAAACACTCCACGCCTTGGGGAAACAGTCCATTGTTCCTCAGGTAAACACCAGCCACTCAAAACAGAAATaGCCAAAGAGGGATAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: QTLHALGKQSIVPQVNTSHSKQK*PKRDRR Trigger: TCGCCTATCCCTCTTTGGCCATTTCTGTTTTGAGTG...GCTGGTGTTTACCTGAGGAACAATGGACTGTTTCCCCAAGGCGTGGAGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
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| 3UTR CAA 90 bp | TACTTGGTTGAGCTCTGTGATAAAGCATGCCAGAATGAGGAGGCCTaGGGGCAAGTATATCTCCAGGCCAAAATGAAATCCTCTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: YLVELCDKACQNEEA*GQVYLQAKMKSSSE Trigger: CTCTGAAGAGGATTTCATTTTGGCCTGGAGATATACTTGCCCCAAGGCCTCCTCATTCTGGCATGCTTTATCACAGAGCTCAACCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR-3UTR TCA 90 bp | GTTGTAGAACAACTGGATTTTGACCAAGTCCTCCACTGTAACAACAGTACCATTCTTCTGACCTTGGAGTaGCCCTCAGTGTCTACAATC | + |
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Preference number: 2 (lower is better) Translates to: VVEQLDFDQVLHCNNSTILLTLE*PSVSTI Trigger: GATTGTAGACACTGAGGGTCACTCCAAGGTCAGAAG...AATGGTACTGTTGTTACAGTGGAGGACTTGGTCAAAATCCAGTTGTTCTACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTTGCTGCAGTATCTGGACAGAAAGCAGACCCAAAATGGCTGGCAACGCCTCACATTCAGTGGTTTaGGTCTATGTAAATACTATG | + |
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Preference number: 2 (lower is better) Translates to: SFCCSIWTESRPKMAGNASHSVV*VYVNTM Trigger: CATAGTATTTACATAGACCCAAACCACTGAATGTGA...GGCGTTGCCAGCCATTTTGGGTCTGCTTTCTGTCCAGATACTGCAGCAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR-3UTR TCA 90 bp | GTATCACAGGTTACCAAAGTGCTGCTGCTCTATGTAAGACAAAGAATCAACATAGTTTGCCTCTCTTTTTaGAGGGAAGGAGCCAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: VSQVTKVLLLYVRQRINIVCLSF*REGARY Trigger: ATACCTGGCTCCTTCCCTTCAAAAAGAGAGGCAAAC...TATGTTGATTCTTTGTCTTACATAGAGCAGCAGCACTTTGGTAACCTGTGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR-3UTR GCA 90 bp | ACACCTGGTCTTAACTCTTCTATTTGGATCTTTGGGGTACAGCCTCAAGTTTTGGAAATAAGAAATAGATaGCAAACAGGATGGGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: TPGLNSSIWIFGVQPQVLEIRNR*QTGWAA Trigger: CGCAGCCCATCCTGTTTGGCATCTATTTCTTATTTC...CAAAACTTGAGGCTGTACCCCAAAGATCCAAATAGAAGAGTTAAGACCAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTTTTCTGACAACACAGCTGTCAAAGTGTTCTGTGGAATAACTGAGTGGAGAATGAGGAGGCCTTaGGGCAAGTATATCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: FYFSDNTAVKVFCGITEWRMRRP*GKYISR Trigger: CCTGGAGATATACTTGCCCCAAGGCCTCCTCATTCT...CCACTCAGTTATTCCACAGAACACTTTGACAGCTGTGTTGTCAGAAAAATAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGGTCTTAACTCTTCTATTTGGATCTTTGGGGTACAGCCTCAAGTTTTGGACCAACAGCTTACTTaGTTGAGCTCTGTGATAAAG | + |
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Preference number: 2 (lower is better) Translates to: TPGLNSSIWIFGVQPQVLDQQLT*LSSVIK Trigger: CTTTATCACAGAGCTCAACCAAGTAAGCTGTTGGTC...CAAAACTTGAGGCTGTACCCCAAAGATCCAAATAGAAGAGTTAAGACCAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR-3UTR GCA 90 bp | TCACCCTGTTCTTTAATAAACGGAGAAGAACTGGACTTTCTGTGTTCTGGACACTTGCAATCGATAAGGTaGGGAAAAGAAAACTCCGAA | + |
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Preference number: 2 (lower is better) Translates to: SPCSLINGEELDFLCSGHLQSIR*GKENSE Trigger: TTCGGAGTTTTCTTTTCCGCACCTTATCGATTGCAA...GTGTCCAGAACACAGAAAGTCCAGTTCTTCTCCGTTTATTAAAGAACAGGGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR-3UTR CCA 90 bp | AAACCATGTTTATTACACCGACAGCTCACTTGTCTTGGTATTGACATGAAAAATTTTCATTCCAGGGTATaGGAAACCAGCCTCGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KPCLLHRQLTCLGIDMKNFHSRV*ETSLAL Trigger: CAAGGCGAGGCTGGTTTCCCATACCCTGGAATGAAA...ATTTTTCATGTCAATACCAAGACAAGTGAGCTGTCGGTGTAATAAACATGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTTTTCTGACAACACAGCTGTCAAAGTGTTCTGTGGAATAACTGAGTGGAAAATTTTGTACTTCTaGCCTTGGAGTGACCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: FYFSDNTAVKVFCGITEWKILYF*PWSDPQ Trigger: CTGAGGGTCACTCCAAGGTCAGAAGTACAAAATTTT...CCACTCAGTTATTCCACAGAACACTTTGACAGCTGTGTTGTCAGAAAAATAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTTTTCTGACAACACAGCTGTCAAAGTGTTCTGTGGAATAACTGAGTGGACAACCAGATCATTTTaGGCACATGTATGTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: FYFSDNTAVKVFCGITEWTTRSF*AHVCQN Trigger: GTTCTGACATACATGTGCTCAAAATGATCTGGTTGT...CCACTCAGTTATTCCACAGAACACTTTGACAGCTGTGTTGTCAGAAAAATAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR-3UTR GCA 90 bp | AAACCATGTTTATTACACCGACAGCTCACTTGTCTTGGTATTGACATGAAAAATTTATGCAAACTCAAGTaGACACTGGCACGAATCAGA | + |
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Preference number: 2 (lower is better) Translates to: KPCLLHRQLTCLGIDMKNLCKLK*TLARIR Trigger: TCTGATTCGTGCCAGTGTGCACTTGAGTTTGCATAA...ATTTTTCATGTCAATACCAAGACAAGTGAGCTGTCGGTGTAATAAACATGGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTTTTCTGACAACACAGCTGTCAAAGTGTTCTGTGGAATAACTGAGTGGACACTTAAAAATAAATaGCCACCCAGATGCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: FYFSDNTAVKVFCGITEWTLKNK*PPRCKQ Trigger: CTGTTTGCATCTGGGTGGTCATTTATTTTTAAGTGT...CCACTCAGTTATTCCACAGAACACTTTGACAGCTGTGTTGTCAGAAAAATAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR GCA 72 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTaGATGGACGGCAGGCCCAGTCCCTCGATGGCGATG | + |
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Preference number: 3 (lower is better) Translates to: PGGLQGPSWRGL*MDGRPSPSMAM Trigger: CATCGCCATCGAGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR CCA 72 bp | TCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTaGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SGILPGGLQGPS*RGLCMDGRPSP Trigger: GGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR GCA 72 bp | TGGCCCCCAGGAGAGGGGTCTGCCTCAGCGACTGTGTaGAGTGAGCAGGTGCAGTGCCGTGAGTACCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: WPPGEGSASATV*SEQVQCREYLL Trigger: CAGCAGGTACTCACGGCACTGCACCTGCTCACTGCACACAGTCGCTGAGGCAGACCCCTCTCCTGGGGGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR GCA 72 bp | GAGAGACACCCCTTCCGGTCCCAGCGTGCGTTTGTCTaGGCAGGACGTTTGGGCAGCAGCACAGCTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ERHPFRSQRAFV*AGRLGSSTAAQ Trigger: CTGAGCAGCTGTGCTGCTGCCCAAACGTCCTGCGCAGACAAACGCACGCTGGGACCGGAAGGGGTGTCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR GCA 72 bp | GAGGCAGAAGGAGAGACACCCCTTCCGGTCCCAGCGTaGGTTTGTCTGCGCAGGACGTTTGGGCAGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: EAEGETPLPVPA*VCLRRTFGQQH Trigger: GTGCTGCTGCCCAAACGTCCTGCGCAGACAAACGCACGCTGGGACCGGAAGGGGTGTCTCTCCTTCTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR CCA 72 bp | TCCGGTCCCAGCGTGCGTTTGTCTGCGCAGGACGTTTaGGCAGCAGCACAGCTGCTCAGCCAACGGGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: SGPSVRLSAQDV*AAAQLLSQRVV Trigger: CACAACCCGTTGGCTGAGCAGCTGTGCTGCTGCCCAAACGTCCTGCGCAGACAAACGCACGCTGGGACCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR TCA 72 bp | GCCATGGCGGACTGCAGAGACCAGGATCTATCACACTaGTGCACCCCAAAGGTCAGGGGCTCGGCCTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: AMADCRDQDLSH*CTPKVRGSAWW Trigger: CCACCAGGCCGAGCCCCTGACCTTTGGGGTGCATCAGTGTGATAGATCCTGGTCTCTGCAGTCCGCCATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR CCA 72 bp | GAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTaGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: EAFTVSLRDSSW*PPRALLAGSVH Trigger: ATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR CCA 72 bp | TCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTaGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SEAFTVSLRDSS*WPPRALLAGSV Trigger: CACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| 3UTR TCA 72 bp | GCATCCTGCACAGGTGGGCGTGGCATCTGCCTCCCATaGCTGATTCCACTAAGACTGGGAGAAGGAAACCGG | + |
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Preference number: 3 (lower is better) Translates to: ASCTGGRGICLP*LIPLRLGEGNR Trigger: CCGGTTTCCTTCTCCCAGTCTTAGTGGAATCAGTCATGGGAGGCAGATGCCACGCCCACCTGTGCAGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR CCA 72 bp | GGGCAGCTTCTGAGGAGCATCCTGCACAGGTGGGCGTaGCATCTGCCTCCCATGACTGATTCCACTAAGACT | + |
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Preference number: 3 (lower is better) Translates to: GQLLRSILHRWA*HLPPMTDSTKT Trigger: AGTCTTAGTGGAATCAGTCATGGGAGGCAGATGCCACGCCCACCTGTGCAGGATGCTCCTCAGAAGCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
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| 3UTR TCA 72 bp | TTTGGGCAGCAGCACAGCTGCTCAGCCAACGGGTTGTaGTCCTCAAGAGTTTTTGCTGCAGTATCTGGACAG | + |
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Preference number: 3 (lower is better) Translates to: FGQQHSCSANGL*SSRVFAAVSGQ Trigger: CTGTCCAGATACTGCAGCAAAAACTCTTGAGGATCACAACCCGTTGGCTGAGCAGCTGTGCTGCTGCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
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| 3UTR GCA 72 bp | ACTCAAGTGCACACTGGCACGAATCAGACAGCAGAGTaGAAACACTCCACGCCTTGGGGAAACAGTCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: TQVHTGTNQTAE*KHSTPWGNSPL Trigger: CAATGGACTGTTTCCCCAAGGCGTGGAGTGTTTGCACTCTGCTGTCTGATTCGTGCCAGTGTGCACTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACAGAAAGCAGACCCAAAATGGCTGGCAACGCCTCTGTTCTGTTGGGGAATGCAAACAGGCATTTTaGCAATCGATAAGGTGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LDRKQTQNGWQRLCSVGECKQAF*QSIRCG Trigger: TCCGCACCTTATCGATTGCAAAAATGCCTGTTTGCA...TTCCCCAACAGAACAGAGGCGTTGCCAGCCATTTTGGGTCTGCTTTCTGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| 3UTR TCA 72 bp | CAGTACCATTACATTTACAGTGACACGATGCACATCTaGACCGTAGCCATGGCGGACTGCAGAGACCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QYHYIYSDTMHI*TVAMADCRDQD Trigger: ATCCTGGTCTCTGCAGTCCGCCATGGCTACGGTTCAGATGTGCATCGTGTCACTGTAAATGTAATGGTACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| 3UTR TCA 72 bp | CAGACAAATGATCAGCTTTGGCTATACCGACCTGGCTaGAAGAGGGAAGGCATTTCCGACCAACAGCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QTNDQLWLYRPG*KREGISDQQPN Trigger: GTTTGGCTGTTGGTCGGAAATGCCTTCCCTCTTTCAGCCAGGTCGGTATAGCCAAAGCTGATCATTTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| 3UTR GCA 72 bp | CTCAGCCAACGGGTTGTGATCCTCAAGAGTTTTTGCTaGAGTATCTGGACAGAAAGCAGACCCAAAATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSQRVVILKSFC*SIWTESRPKMA Trigger: AGCCATTTTGGGTCTGCTTTCTGTCCAGATACTGCAGCAAAAACTCTTGAGGATCACAACCCGTTGGCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| 3UTR GCA 72 bp | CTGCTCAGCCAACGGGTTGTGATCCTCAAGAGTTTTTaGTGCAGTATCTGGACAGAAAGCAGACCCAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: LLSQRVVILKSF*CSIWTESRPKM Trigger: CATTTTGGGTCTGCTTTCTGTCCAGATACTGCAGCAAAAACTCTTGAGGATCACAACCCGTTGGCTGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| 3UTR CCA 72 bp | CCAGGCCAAAATGAAATCCTCTTCAGAGCAAATCCTTaGCACCTCTCTGAACCCTTTCAGGACAGAGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PGQNEILFRANP*HLSEPFQDRVC Trigger: GCAAACTCTGTCCTGAAAGGGTTCAGAGAGGTGCCAAGGATTTGCTCTGAAGAGGATTTCATTTTGGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAATCCTCTTCAGAGCAAATCCTTGGCACCTCTCTGAACCCTTTCAGGACAAGTTTGCCTCTCTTTTaGAAGGGAAGGAGCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: MKSSSEQILGTSLNPFRTSLPLF*KGRSQV Trigger: TACCTGGCTCCTTCCCTTCAAAAAGAGAGGCAAACT...TGTCCTGAAAGGGTTCAGAGAGGTGCCAAGGATTTGCTCTGAAGAGGATTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| 3UTR CCA 72 bp | GAACACAATTTCTCAGGTAGAGAAATACCTGCCCCGTaGAATCTATCTCCAAGACTACATGTGCCTGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: EHNFSGREIPAP*NLSPRLHVPDG Trigger: TCCATCAGGCACATGTAGTCTTGGAGATAGATTCCACGGGGCAGGTATTTCTCTACCTGAGAAATTGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTGCTCAGCCAACGGGTTGTGATCCTCAAGAGTTTTTGCTGCAGTATCTGATCCAATTAAAAACATaGCTGCGTTACCTACCAACT | + |
|
Preference number: 3 (lower is better) Translates to: TAAQPTGCDPQEFLLQYLIQLKT*LRYLPT Trigger: AGTTGGTAGGTAACGCAGCAATGTTTTTAATTGGAT...CAGATACTGCAGCAAAAACTCTTGAGGATCACAACCCGTTGGCTGAGCAGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| 3UTR TCA 72 bp | TGTGCTGAAGTCCTGCTTTCAAACGCTCTTCGGAGTTaGCCTGACATCACTTCAACTAATTTAAGAGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: CAEVLLSNALRS*PDITSTNLRGT Trigger: TGTACCTCTTAAATTAGTTGAAGTGATGTCAGGTCAACTCCGAAGAGCGTTTGAAAGCAGGACTTCAGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| 3UTR GCA 72 bp | ATGTCCCTGGGGGAAAGTTATTTCAAGAAAGAAATTTaGAGTCCTCAGTTGAGGCCTTTCGAGAGAAACGTA | + |
|
Preference number: 3 (lower is better) Translates to: MSLGESYFKKEI*SPQLRPFERNV Trigger: TACGTTTCTCTCGAAAGGCCTCAACTGAGGACTGCAAATTTCTTTCTTGAAATAACTTTCCCCCAGGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| 3UTR-3UTR CAA 90 bp | ACCAACATTATATATAGAAACCATAACTGGGTCAAGTGGTCAATTAGTCCTCCTCAAACACTCCACGCCTaGGGGAAACAGTCCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TNIIYRNHNWVKWSISPPQTLHA*GKQSIV Trigger: AACAATGGACTGTTTCCCCAAGGCGTGGAGTGTTTG...AGGAGGACTAATTGACCACTTGACCCAGTTATGGTTTCTATATATAATGTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
||
| 3UTR-3UTR CAA 90 bp | TCACCCTGTTCTTTAATAAACGGAGAAGAACTGGACTTTCTGTGTTCTGGACACAACAACCAGATCATTTaGAGCACATGTATGTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPCSLINGEELDFLCSGHNNQII*STCMSE Trigger: TTCTGACATACATGTGCTCAAAATGATCTGGTTGTT...GTGTCCAGAACACAGAAAGTCCAGTTCTTCTCCGTTTATTAAAGAACAGGGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| 3UTR TCA 72 bp | AAAGTTATTTCAAGAAAGAAATTTGCAGTCCTCAGTTaGGGCCTTTCGAGAGAAACGTATGAAAGAAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KVISRKKFAVLS*GLSRETYERKE Trigger: CTCTTTTCTTTCATACGTTTCTCTCGAAAGGCCTCAACTGAGGACTGCAAATTTCTTTCTTGAAATAACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR TCA 90 bp | GGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCCGGTGGAAGGCGGCGTaGAGCGGCGGCTCGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLQGPSWRGLCMDGRPSPRWKAA*SGGSCW Trigger: CCAGCACGAGCCGCCGCTTCACGCCGCCTTCCACCG...GGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCGCAGCGCGGCGCCGGTaGATGCGTTGGTGCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLQGPSWRGLCMDGRPSPAARRR*MRWCRA Trigger: CGCCCTGCACCAACGCATCCACCGGCGCCGCGCTGC...GGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCGTGGGGGCTGGGTGGTaGGGGCTGACCCTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQGPSWRGLCMDGRPSPVGAGW*GLTLMA Trigger: GGCCATGAGGGTCAGCCCGCACCACCCAGCCCCCAC...GGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCCGCCGGTGGATGCGTTaGTGCAGGGCGGCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLQGPSWRGLCMDGRPRRWMR*CRAAGC Trigger: GCATCCTGCCGCCCTGCACCAACGCATCCACCGGCG...GGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCTCGATGGCCGGTGGATGCGTTGGTaGAGGGCGGCAGGATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RALLAGSVHGRQAQSLDGRWMRW*RAAGCA Trigger: CGCGCATCCTGCCGCCCTGCACCAACGCATCCACCG...GCCATCGAGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCGGTGGAAGGCGGCGTaGAGCGGCGGCTCGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QFPSGILPGGLQGPSWRGRWKAA*SGGSCW Trigger: CCAGCACGAGCCGCCGCTTCACGCCGCCTTCCACCG...ACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCGGACCACGGTGGGGATaGCTGGATCTGCCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLQGPSWRGLCMDGRPGPRWG*LDLPGI Trigger: GATGCCAGGCAGATCCAGCCATCCCCACCGTGGTCC...GGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCGTAGGTGAAGGCGCCTaGGTAGTGCATGCGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLQGPSWRGLCMDGRPVGEGA*VVHARV Trigger: GACCCGCGCATGCACTACCCAGGCGCCTTCACCTAC...GGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCGTGGGGGCTGGGTGGTaGGGGCTGACCCTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPPGFFLVASKGPPGGVVGAGW*GLTLMA Trigger: GGCCATGAGGGTCAGCCCGCACCACCCAGCCCCCAC...GACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCGCGAGTTGCTATGGCTaGCCTCGGTCTCCACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLQGPSWRGLCMDGRPASCYG*PRSPPR Trigger: ACGTGGTGGAGACCGAGGGCAGCCATAGCAACTCGC...GGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCACGCTCCTCAGCTTGCTaGCCAGGGCGGCGCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFLVASKGPPGGVCAWTARSSAC*PGRRRH Trigger: ATGGCGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCG...TGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTGGCGTGGGGGCTGGGTaGTGCGGGCTGACCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QFPSGILPGGLQGPSWRGGVGAG*CGLTLM Trigger: CATGAGGGTCAGCCCGCACCACCCAGCCCCCACGCC...ACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCGGACCACGGTGGGGATaGCTGGATCTGCCTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLQGPSWRGLCMDGRPGPRWG*LDLPGI Trigger: AATGCCAGGCAGATCCAGCCATCCCCACCGTGGTCC...GGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113956.10 |
||
| CDS-3UTR TCA 90 bp | GATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGGCTGGCACGGCCGGGTaGAATGGGTGTCGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSSWWPPRALLAGSVHGRAGTAG*NGCRWV Trigger: CACCCAGCGACACCCATTTCACCCGGCCGTGCCAGC...CCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCAGAGAGGCTGGTCATaGCGCTGGCACGGCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFPSGILPGGLQGPSWRGQRGWS*RWHGRV Trigger: CACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTG...ACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | CACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGCAGAGAGGCTGGTCATaGCGCTGGCACGGCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSFPPGFFLVASKGPPGGQRGWS*RWHGRV Trigger: CACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTG...CCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCAGCTTCTGAGGAGCATCCTGCACAGGTGGGCGTGGCATCTGCCTCCCCGCTCCTCAGCTTGCTaGCCAGGGCGGCGCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGQLLRSILHRWAWHLPPRSSAC*PGRRRH Trigger: ATGGCGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCG...GGGAGGCAGATGCCACGCCCACCTGTGCAGGATGCTCCTCAGAAGCTGCCCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | TTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGCAGCGCGGCGCCGGTaGATGCGTTGGTGCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FTVSLRDSSWWPPRALLAAARRR*MRWCRA Trigger: CGCCCTGCACCAACGCATCCACCGGCGCCGCGCTGC...CGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCGCCGTGCGCCGCAGCTaGTCCAATTCACTGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPPGFFLVASKGPPGGVAVRRS*SNSLSR Trigger: GCGGCTCAGTGAATTGGAGCAGCTGCGGCGCACGGC...GACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCGCCTGGGTAGTGCATaGGCGGGTCGGAGATGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QFPSGILPGGLQGPSWRGRLGSA*AGRRWT Trigger: CGTCCATCTCCGACCCGCGCATGCACTACCCAGGCG...ACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCTTAAAGGCAGTGGAGTaGTTCAAGGAGGCCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGLQGPSWRGLCMDGRPLKAVE*FKEARG Trigger: CCCTCGGGCCTCCTTGAACCACTCCACTGCCTTTAA...GGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGGCTGGTCATGCCGCTaGCACGGCCGGGTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HSFPPGFFLVASKGPPGGGWSCR*HGRVKW Trigger: CCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCC...CCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCTGGACAGAGGAAGAGGTaGTGGATCCCAGGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASKGPPGGVCAWTAGPVPGQRKR*WIPGTG Trigger: ACCAGTACCTGGGATCCATCACCTCTTCCTCTGTCC...AGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCTCGATGGCGGACAGAGGAAGAGGTaGTGGATCCCAGGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RALLAGSVHGRQAQSLDGGQRKR*WIPGTG Trigger: ACCAGTACCTGGGATCCATCACCTCTTCCTCTGTCC...GCCATCGAGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | TTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGCTGGCACGGCCGGGTaGAATGGGTGTCGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTVSLRDSSWWPPRALLAAGTAG*NGCRWV Trigger: CACCCAGCGACACCCATTTCACCCGGCCGTGCCAGC...CGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCTCGACTGGAAAGTTCTaGAGAGAGGCTGGTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQGPSWRGLCMDGRPSPSTGKF*REAGHA Trigger: GGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGA...GGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCTCGATGGTGTTGGTGGGCGAGTTaGTATGGCTGCCCTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGPPGGVCAWTAGPVPRWCWWAS*YGCPRS Trigger: AGACCGAGGGCAGCCATAGCAACTCGCCCACCAACA...CCATCGAGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCAGCTTCTGAGGAGCATCCTGCACAGGTGGGCGTGGCATCTGCCTCCCGGCTGGTCATGCCGCTaGCACGGCCGGGTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KGQLLRSILHRWAWHLPPGWSCR*HGRVKW Trigger: CCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCC...GGGAGGCAGATGCCACGCCCACCTGTGCAGGATGCTCCTCAGAAGCTGCCCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | CACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTTCTGCAGAGAGGCTaGTCATGCCGCTGGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSFPPGFFLVASKGPPGGVLQRG*SCRWHG Trigger: GCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAAC...CCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | GATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCCAGTGCCACCACCTTaGAAGCGATGGGCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSSWWPPRALLAGSVHGRPVPPP*KRWAGS Trigger: AGACCCTGCCCATCGCTTTCAAGGTGGTGGCACTGG...CCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | GATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGGCGAGTTGCTATGGCTaGCCTCGGTCTCCACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSWWPPRALLAGSVHGRASCYG*PRSPPR Trigger: ACGTGGTGGAGACCGAGGGCAGCCATAGCAACTCGC...CCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGCACGGTGGGGATGGCTaGATCTGCCTGGCATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQFPSGILPGGLQGPSWRHGGDG*ICLASC Trigger: GCAGGATGCCAGGCAGATCCAGCCATCCCCACCGTG...CCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGTAGGTGAAGGCGCCTaGGTAGTGCATGCGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQFPSGILPGGLQGPSWRVGEGA*VVHARV Trigger: GACCCGCGCATGCACTACCCAGGCGCCTTCACCTAC...CCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGAGCGGCGGCTCGTGCTaGCATCTACGGGGATACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQFPSGILPGGLQGPSWRSGGSC*HLRGYA Trigger: TGCGTATCCCCGTAGATGCCAGCACGAGCCGCCGCT...CCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCGCGCCTCGCTCATCTTaGCGGGGCTCAGCGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SEAFTVSLRDSSWWPPRAAPRSS*RGSARW Trigger: CCACCGCGCTGAGCCCCGGCAAGATGAGCGAGGCGC...GGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGCGGGACGTCCCCCAGTaGCACCACCTTGAAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQFPSGILPGGLQGPSWRRDVPQ*HHLESD Trigger: ATCGCTTTCAAGGTGGTGGCACTGGGGGACGTCCCG...CCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCGGCGTGGGGGCTGGGTaGTGCGGGCTGACCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SEAFTVSLRDSSWWPPRAGVGAG*CGLTLM Trigger: CATGAGGGTCAGCCCGCACCACCCAGCCCCCACGCC...GGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTGTCATAGGACCACGGTaGGGATGGCTGGATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFPSGILPGGLQGPSWRGVIGPR*GWLDLP Trigger: AGGCAGATCCAGCCATCCCCACCGTGGTCCTATGAC...ACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGAGAGGCCGAGCTCATaGCTGACATGCCGATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQFPSGILPGGLQGPSWRERPSS*LTCRCR Trigger: TCGGCATCGGCATGTCAGCCATGAGCTCGGCCTCTC...CCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGGCTGCTCCAATTCACTaGGCCGCTCGGAAAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TVSLRDSSWWPPRALLAGAAPIH*AARKRT Trigger: TGTCCTTTTCCGAGCGGCTCAGTGAATTGGAGCAGC...CCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGTGGGGAGGCTGGGGTTaGGCAGCGCGGCGCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSEAFTVSLRDSSWWPPRWGGWG*AARRRW Trigger: CCACCGGCGCCGCGCTGCTCAACCCCAGCCTCCCCA...CCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | TTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGCGGGACGTCCCCCAGTaGCACCACCTTGAAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTVSLRDSSWWPPRALLARDVPQ*HHLESD Trigger: ATCGCTTTCAAGGTGGTGGCACTGGGGGACGTCCCG...CGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCGCCGGTGGATGCGTTaGTGCAGGGCGGCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAFTVSLRDSSWWPPRARRWMR*CRAAGC Trigger: GCATCCTGCCGCCCTGCACCAACGCATCCACCGGCG...GGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| 3UTR CAA 72 bp | TTCCGGTCCCAGCGTGCGTTTGTCTGCGCAGGACGTTaGGGCAGCAGCACAGCTGCTCAGCCAACGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRSQRAFVCAGR*GSSTAAQPTGC Trigger: ACAACCCGTTGGCTGAGCAGCTGTGCTGCTGCCCAAACGTCCTGCGCAGACAAACGCACGCTGGGACCGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR TCA 90 bp | TCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGCTGCTCCAATTCACTaGGCCGCTCGGAAAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SQFPSGILPGGLQGPSWRAAPIH*AARKRT Trigger: TGTCCTTTTCCGAGCGGCTCAGTGAATTGGAGCAGC...CCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCTGCTCAGCCAACGGGTTGTGATCCTCAAGAGTTTTTGCTGCAGTATCTGTGGGGAGGCTGGGGTTaGGCAGCGCGGCGCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAAQPTGCDPQEFLLQYLWGGWG*AARRRW Trigger: CCACCGGCGCCGCGCTGCTCAACCCCAGCCTCCCCA...CAGATACTGCAGCAAAAACTCTTGAGGATCACAACCCGTTGGCTGAGCAGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR GCA 90 bp | ATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCAGAGAGGCTGGTCATaGCGCTGGCACGGCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IRSIHSFPPGFFLVASKGQRGWS*RWHGRV Trigger: CACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTG...GCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTCGACTGGAAAGTTCTaGAGAGAGGCTGGTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPPGFFLVASKGPPGGVSTGKF*REAGHA Trigger: GGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGA...GACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCGCCTGGGTAGTGCATaGGCGGGTCGGAGATGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SEAFTVSLRDSSWWPPRARLGSA*AGRRWT Trigger: CGTCCATCTCCGACCCGCGCATGCACTACCCAGGCG...GGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCTACAAACTCCCGGGCTTaGTCTGATCATCTAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASKGPPGGVCAWTAGPVPTNSRA*SDHLVS Trigger: AGAAACTAGATGATCAGACCAAGCCCGGGAGTTTGT...AGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCAGTAGGGAACTGGCGTaGGTCGCCGAAGGCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAFTVSLRDSSWWPPRALSRELA*VAEGGQ Trigger: CTGACCGCCTTCGGCGACCCACGCCAGTTCCCTACT...GAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | ATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGAGAGGCCGAGCTCATaGCTGACATGCCGATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IHSFPPGFFLVASKGPPGERPSS*LTCRCR Trigger: TCGGCATCGGCATGTCAGCCATGAGCTCGGCCTCTC...GCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | GAAATAAGAAATAGATGCCAAACAGGATGGGCTGCGTCTTCCCCACCCCGAACCGCGCCTCGCTCATCTTaGCGGGGCTCAGCGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EIRNRCQTGWAASSPPRTAPRSS*RGSARW Trigger: CCACCGCGCTGAGCCCCGGCAAGATGAGCGAGGCGC...GGTTCGGGGTGGGGAAGACGCAGCCCATCCTGTTTGGCATCTATTTCTTATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | AGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTTGAATCTCGCTACCTaGTTCTTCATGGCCGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFPPGFFLVASKGPPGGVLNLAT*FFMAAV Trigger: TACCGCGGCCATGAAGAACCAGGTAGCGAGATTCAA...GACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | ATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGTCATAGGACCACGGTaGGGATGGCTGGATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSFPPGFFLVASKGPPGVIGPR*GWLDLP Trigger: AGGCAGATCCAGCCATCCCCACCGTGGTCCTATGAC...GCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCAGCTTCTGAGGAGCATCCTGCACAGGTGGGCGTGGCATCTGCCTCCCCCGTTGAGAGTCGACTaGAAAGTTCTGCAGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGQLLRSILHRWAWHLPPPLRVD*KVLQRG Trigger: GCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGG...GGGAGGCAGATGCCACGCCCACCTGTGCAGGATGCTCCTCAGAAGCTGCCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCAGTAGGGAACTGGCGTaGGTCGCCGAAGGCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEAFTVSLRDSSWWPPRASRELA*VAEGGQ Trigger: CTGACCGCCTTCGGCGACCCACGCCAGTTCCCTACT...GGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCTGGCACGGCCGGGTaGAATGGGTGTCGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSEAFTVSLRDSSWWPPRAGTAG*NGCRWV Trigger: CACCCAGCGACACCCATTTCACCCGGCCGTGCCAGC...CCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGGCAGCTTCTGAGGAGCATCCTGCACAGGTGGGCGTGGCATCTGCCTCCCGTTTTCATCGTTGCCTaGCATGACGGTGACCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGQLLRSILHRWAWHLPPVFIVA*HDGDQS Trigger: ACTCTGGTCACCGTCATGGCAGGCAACGATGAAAAC...GGGAGGCAGATGCCACGCCCACCTGTGCAGGATGCTCCTCAGAAGCTGCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR GCA 90 bp | TTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGTTTTCATCGTTGCCTaGCATGACGGTGACCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTVSLRDSSWWPPRALLAVFIVA*HDGDQS Trigger: ACTCTGGTCACCGTCATGGCAGGCAACGATGAAAAC...CGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | GATTCCACTAAGACTGGGAGAAGGAAACCGGCTCCTTCAGACTTTTGGGGTACACGGTGGATGCGTTGGTaGAGGGCGGCAGGATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSTKTGRRKPAPSDFWGTRWMRW*RAAGCA Trigger: CGCGCATCCTGCCGCCCTGCACCAACGCATCCACCG...TGTACCCCAAAAGTCTGAAGGAGCCGGTTTCCTTCTCCCAGTCTTAGTGGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | CTGGACAGAAAGCAGACCCAAAATGGCTGGCAACGCCTCTGTTCTGTTGGGGAACACGGTGGGGATGGCTaGATCTGCCTGGCATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDRKQTQNGWQRLCSVGEHGGDG*ICLASC Trigger: GCAGGATGCCAGGCAGATCCAGCCATCCCCACCGTG...TTCCCCAACAGAACAGAGGCGTTGCCAGCCATTTTGGGTCTGCTTTCTGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR CCA 90 bp | ATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCCCGTTGAGAGTCGACTaGAAAGTTCTGCAGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IHSFPPGFFLVASKGPPGPLRVD*KVLQRG Trigger: GCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGG...GCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACAGAAAGCAGACCCAAAATGGCTGGCAACGCCTCTGTTCTGTTGGGGAAGTAGGTGAAGGCGCCTaGGTAGTGCATGCGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDRKQTQNGWQRLCSVGEVGEGA*VVHARV Trigger: GACCCGCGCATGCACTACCCAGGCGCCTTCACCTAC...TTCCCCAACAGAACAGAGGCGTTGCCAGCCATTTTGGGTCTGCTTTCTGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR GCA 90 bp | CTCCACGCCTTGGGGAAACAGTCCATTGTTCCTCAGGTAAACACCAGCACCTCTCGGGACGTCCCCCAGTaGCACCACCTTGAAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHALGKQSIVPQVNTSTSRDVPQ*HHLESD Trigger: ATCGCTTTCAAGGTGGTGGCACTGGGGGACGTCCCG...AGAGGTGCTGGTGTTTACCTGAGGAACAATGGACTGTTTCCCCAAGGCGTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
||
| CDS-3UTR GCA 90 bp | GGCACCTCTCTGAACCCTTTCAGGACAGAGTTTGCCTCTCTTTTTGAAGGGAAGCGCCTGGGTAGTGCATaGGCGGGTCGGAGATGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GTSLNPFRTEFASLFEGKRLGSA*AGRRWT Trigger: CGTCCATCTCCGACCCGCGCATGCACTACCCAGGCG...CTTCCCTTCAAAAAGAGAGGCAAACTCTGTCCTGAAAGGGTTCAGAGAGGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | AAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGTGGGCGAGTTGCTATaGCTGCCCTCGGTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KSEAFTVSLRDSSWWPPRVGELL*LPSVST Trigger: GGTGGAGACCGAGGGCAGCCATAGCAACTCGCCCAC...CCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGTGGGGAGGCTGGGGTTaGGCAGCGCGGCGCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLFTALLNQKHSQFPSGWGGWG*AARRRW Trigger: CCACCGGCGCCGCGCTGCTCAACCCCAGCCTCCCCA...CCCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | GATTCCACTAAGACTGGGAGAAGGAAACCGGCTCCTTCAGACTTTTGGGGTACAGTTCTGCAGAGAGGCTaGTCATGCCGCTGGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSTKTGRRKPAPSDFWGTVLQRG*SCRWHG Trigger: GCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAAC...TGTACCCCAAAAGTCTGAAGGAGCCGGTTTCCTTCTCCCAGTCTTAGTGGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | TCACCCTGTTCTTTAATAAACGGAGAAGAACTGGACTTTCTGTGTTCTGGACACGCAGCGCGGCGCCGGTaGATGCGTTGGTGCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPCSLINGEELDFLCSGHAARRR*MRWCRA Trigger: CGCCCTGCACCAACGCATCCACCGGCGCCGCGCTGC...GTGTCCAGAACACAGAAAGTCCAGTTCTTCTCCGTTTATTAAAGAACAGGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGCGGTGGAAGGCGGCGTaGAGCGGCGGCTCGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLFTALLNQKHSQFPSGRWKAA*SGGSCW Trigger: CCAGCACGAGCCGCCGCTTCACGCCGCCTTCCACCG...CCCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | GATTCCACTAAGACTGGGAGAAGGAAACCGGCTCCTTCAGACTTTTGGGGTACACTAGTACCTCCACCATaGTGCGGTCGCCGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTKTGRRKPAPSDFWGTLVPPP*CGRRSS Trigger: TGAGGAGCGGCGACCGCAGCATGGTGGAGGTACTAG...TGTACCCCAAAAGTCTGAAGGAGCCGGTTTCCTTCTCCCAGTCTTAGTGGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR GCA 90 bp | ATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCTCGACTGGAAAGTTCTaGAGAGAGGCTGGTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSIHSFPPGFFLVASKGSTGKF*REAGHA Trigger: GGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGA...GCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCTGCTCAGCCAACGGGTTGTGATCCTCAAGAGTTTTTGCTGCAGTATCTGGCGAGTTGCTATGGCTaGCCTCGGTCTCCACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TAAQPTGCDPQEFLLQYLASCYG*PRSPPR Trigger: ACGTGGTGGAGACCGAGGGCAGCCATAGCAACTCGC...CAGATACTGCAGCAAAAACTCTTGAGGATCACAACCCGTTGGCTGAGCAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCATGGCTGGATCTGCCTaGCATCCTGCATCTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEAFTVSLRDSSWWPPRAMAGSA*HPASDF Trigger: AAAGTCAGATGCAGGATGCCAGGCAGATCCAGCCAT...GGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCGTTGAGAGTCGACTaGAAAGTTCTGCAGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSIHSFPPGFFLVASKGPLRVD*KVLQRG Trigger: GCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGG...GCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGCTCCCGGGCTTGGTCTaGTCATCTAGTTTCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSEAFTVSLRDSSWWPPRLPGLV*SSSFCR Trigger: TCGGCAGAAACTAGATGATCAGACCAAGCCCGGGAG...CCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGCGCCTCGCTCATCTTaGCGGGGCTCAGCGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFIHSIAKSEAFTVSLRAPRSS*RGSARW Trigger: CCACCGCGCTGAGCCCCGGCAAGATGAGCGAGGCGC...CCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCTTGAATCTCGCTACCTaGTTCTTCATGGCCGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IRSIHSFPPGFFLVASKGLNLAT*FFMAAV Trigger: TACCGCGGCCATGAAGAACCAGGTAGCGAGATTCAA...GCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAATCCTCTTCAGAGCAAATCCTTGGCACCTCTCTGAACCCTTTCAGGACAGGACCACGGTGGGGATaGCTGGATCTGCCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: MKSSSEQILGTSLNPFRTGPRWG*LDLPGI Trigger: GATGCCAGGCAGATCCAGCCATCCCCACCGTGGTCC...TGTCCTGAAAGGGTTCAGAGAGGTGCCAAGGATTTGCTCTGAAGAGGATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR CCA 90 bp | GATTCCACTAAGACTGGGAGAAGGAAACCGGCTCCTTCAGACTTTTGGGGTACAGTCATAGGACCACGGTaGGGATGGCTGGATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSTKTGRRKPAPSDFWGTVIGPR*GWLDLP Trigger: AGGCAGATCCAGCCATCCCCACCGTGGTCCTATGAC...TGTACCCCAAAAGTCTGAAGGAGCCGGTTTCCTTCTCCCAGTCTTAGTGGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | ATGAAATCCTCTTCAGAGCAAATCCTTGGCACCTCTCTGAACCCTTTCAGGACAAGCGGCGGCTCGTGCTaGCATCTACGGGGATACGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKSSSEQILGTSLNPFRTSGGSC*HLRGYA Trigger: TGCGTATCCCCGTAGATGCCAGCACGAGCCGCCGCT...TGTCCTGAAAGGGTTCAGAGAGGTGCCAAGGATTTGCTCTGAAGAGGATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113956.10 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGCGGTGGATGCGTTGGTaGAGGGCGGCAGGATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSFIHSIAKSEAFTVSLRRWMRW*RAAGCA Trigger: CGCGCATCCTGCCGCCCTGCACCAACGCATCCACCG...CCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGCGCCGGTGGATGCGTTaGTGCAGGGCGGCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFIHSIAKSEAFTVSLRRRWMR*CRAAGC Trigger: GCATCCTGCCGCCCTGCACCAACGCATCCACCGGCG...CCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTGGTCTTAACTCTTCTATTTGGATCTTTGGGGTACAGCCTCAAGTTTTGGTTCTGCAGAGAGGCTaGTCATGCCGCTGGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGLNSSIWIFGVQPQVLVLQRG*SCRWHG Trigger: GCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAAC...CAAAACTTGAGGCTGTACCCCAAAGATCCAAATAGAAGAGTTAAGACCAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | ACACCTGGTCTTAACTCTTCTATTTGGATCTTTGGGGTACAGCCTCAAGTTTTGGTGGGCGAGTTGCTATaGCTGCCCTCGGTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TPGLNSSIWIFGVQPQVLVGELL*LPSVST Trigger: GGTGGAGACCGAGGGCAGCCATAGCAACTCGCCCAC...CAAAACTTGAGGCTGTACCCCAAAGATCCAAATAGAAGAGTTAAGACCAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR GCA 90 bp | AGTGCAAACACTCCACGCCTTGGGGAAACAGTCCATTGTTCCTCAGGTAAACACGTTTTCATCGTTGCCTaGCATGACGGTGACCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SANTPRLGETVHCSSGKHVFIVA*HDGDQS Trigger: ACTCTGGTCACCGTCATGGCAGGCAACGATGAAAAC...GTGTTTACCTGAGGAACAATGGACTGTTTCCCCAAGGCGTGGAGTGTTTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
||
| CDS-3UTR GCA 90 bp | GTATCACAGGTTACCAAAGTGCTGCTGCTCTATGTAAGACAAAGAATCAACATAGCCGTGCGCCGCAGCTaGTCCAATTCACTGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSQVTKVLLLYVRQRINIAVRRS*SNSLSR Trigger: GCGGCTCAGTGAATTGGAGCAGCTGCGGCGCACGGC...TATGTTGATTCTTTGTCTTACATAGAGCAGCAGCACTTTGGTAACCTGTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR CCA 90 bp | GTATCACAGGTTACCAAAGTGCTGCTGCTCTATGTAAGACAAAGAATCAACATAGGCTGGTCATGCCGCTaGCACGGCCGGGTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQVTKVLLLYVRQRINIGWSCR*HGRVKW Trigger: CCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCC...TATGTTGATTCTTTGTCTTACATAGAGCAGCAGCACTTTGGTAACCTGTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | GTTGTAGAACAACTGGATTTTGACCAAGTCCTCCACTGTAACAACAGTACCATTAGTAGGGAACTGGCGTaGGTCGCCGAAGGCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVEQLDFDQVLHCNNSTISRELA*VAEGGQ Trigger: CTGACCGCCTTCGGCGACCCACGCCAGTTCCCTACT...AATGGTACTGTTGTTACAGTGGAGGACTTGGTCAAAATCCAGTTGTTCTACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| 3UTR CAA 72 bp | AGCTCCATTATCTCAGAATTGGCTTATGGGTCTTCCTaGAAGACAGCGAATGAGGAGACCGCTGGAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSIISELAYGSS*KTANEETAGST Trigger: GGTGCTTCCAGCGGTCTCCTCATTCGCTGTCTTCAAGGAAGACCCATAAGCCAATTCTGAGATAATGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGCGGGACGTCCCCCAGTaGCACCACCTTGAAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLFTALLNQKHSQFPSGRDVPQ*HHLESD Trigger: ATCGCTTTCAAGGTGGTGGCACTGGGGGACGTCCCG...CCCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCAGCATTTCTCAGTTCTaGCGAGTAGTTTTCATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IRSIHSFPPGFFLVASKGSISQF*RVVFIV Trigger: AACGATGAAAACTACTCGGCAGAACTGAGAAATGCT...GCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCGGTTATGCAAACTCAAGTGCACACTGGCACGAATCAGACAGCAGAGTGCAGCATTTCTCAGTTCTaGCGAGTAGTTTTCATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GAVMQTQVHTGTNQTAECSISQF*RVVFIV Trigger: AACGATGAAAACTACTCGGCAGAACTGAGAAATGCT...GCACTCTGCTGTCTGATTCGTGCCAGTGTGCACTTGAGTTTGCATAACCGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
||
| CDS-3UTR CCA 90 bp | GTATCACAGGTTACCAAAGTGCTGCTGCTCTATGTAAGACAAAGAATCAACATAGTGGGCGAGTTGCTATaGCTGCCCTCGGTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VSQVTKVLLLYVRQRINIVGELL*LPSVST Trigger: GGTGGAGACCGAGGGCAGCCATAGCAACTCGCCCAC...TATGTTGATTCTTTGTCTTACATAGAGCAGCAGCACTTTGGTAACCTGTGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| 3UTR CAA 72 bp | GCTGCTCAGCCAACGGGTTGTGATCCTCAAGAGTTTTaGCTGCAGTATCTGGACAGAAAGCAGACCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AAQPTGCDPQEF*LQYLDRKQTQN Trigger: ATTTTGGGTCTGCTTTCTGTCCAGATACTGCAGCAAAAACTCTTGAGGATCACAACCCGTTGGCTGAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR GCA 90 bp | GTATCACAGGTTACCAAAGTGCTGCTGCTCTATGTAAGACAAAGAATCAACATACTAGTACCTCCACCATaGTGCGGTCGCCGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSQVTKVLLLYVRQRINILVPPP*CGRRSS Trigger: TGAGGAGCGGCGACCGCAGCATGGTGGAGGTACTAG...TATGTTGATTCTTTGTCTTACATAGAGCAGCAGCACTTTGGTAACCTGTGATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGTGTTGGTGGGCGAGTTaGTATGGCTGCCCTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLFTALLNQKHSQFPSGCWWAS*YGCPRS Trigger: AGACCGAGGGCAGCCATAGCAACTCGCCCACCAACA...CCCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGTTTGGGTCTATGTAAATACTATGTAAGTAAACCCCTGACCAACAGCTTAGAGAGGCCGAGCTCATaGCTGACATGCCGATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGLGLCKYYVSKPLTNSLERPSS*LTCRCR Trigger: TCGGCATCGGCATGTCAGCCATGAGCTCGGCCTCTC...TAAGCTGTTGGTCAGGGGTTTACTTACATAGTATTTACATAGACCCAAACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | GTATCACAGGTTACCAAAGTGCTGCTGCTCTATGTAAGACAAAGAATCAACATACACGGTGGGGATGGCTaGATCTGCCTGGCATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQVTKVLLLYVRQRINIHGGDG*ICLAFR Trigger: CCGAAATGCCAGGCAGATCCAGCCATCCCCACCGTG...TATGTTGATTCTTTGTCTTACATAGAGCAGCAGCACTTTGGTAACCTGTGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113956.10 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGGACAGAGGAAGAGGTaGTGGATCCCAGGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSFIHSIAKSEAFTVSLRGQRKR*WIPGTG Trigger: ACCAGTACCTGGGATCCATCACCTCTTCCTCTGTCC...CCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGTTAAAGGCAGTGGAGTaGTTCAAGGAGGCCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFIHSIAKSEAFTVSLRLKAVE*FKEARG Trigger: CCCTCGGGCCTCCTTGAACCACTCCACTGCCTTTAA...CCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR GCA 90 bp | GGCACCTCTCTGAACCCTTTCAGGACAGAGTTTGCCTCTCTTTTTGAAGGGAAGAGCATTTCTCAGTTCTaGCGAGTAGTTTTCATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTSLNPFRTEFASLFEGKSISQF*RVVFIV Trigger: AACGATGAAAACTACTCGGCAGAACTGAGAAATGCT...CTTCCCTTCAAAAAGAGAGGCAAACTCTGTCCTGAAAGGGTTCAGAGAGGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR TCA 90 bp | TTTTATTTTTCTGACAACACAGCTGTCAAAGTGTTCTGTGGAATAACTGAGTGGCTCCCGGGCTTGGTCTaGTCATCTAGTTTCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FYFSDNTAVKVFCGITEWLPGLV*SSSFCR Trigger: TCGGCAGAAACTAGATGATCAGACCAAGCCCGGGAG...CCACTCAGTTATTCCACAGAACACTTTGACAGCTGTGTTGTCAGAAAAATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGGTTTTCATCGTTGCCTaGCATGACGGTGACCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLFTALLNQKHSQFPSGVFIVA*HDGDQS Trigger: ACTCTGGTCACCGTCATGGCAGGCAACGATGAAAAC...CCCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGGATGGCTGGATCTGCCTaGCATCCTGCATCTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLFTALLNQKHSQFPSGMAGSA*HPASDF Trigger: AAAGTCAGATGCAGGATGCCAGGCAGATCCAGCCAT...CCCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGTGCTGGCATCTCTCATaGAGCACTGTGGATATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFIHSIAKSEAFTVSLRCWHLS*STVDMK Trigger: CTTCATATCCACAGTGCTTCATGAGAGATGCCAGCA...CCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR CCA 90 bp | GTATCACAGGTTACCAAAGTGCTGCTGCTCTATGTAAGACAAAGAATCAACATATTGAATCTCGCTACCTaGTTCTTCATGGCCGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSQVTKVLLLYVRQRINILNLAT*FFMAAV Trigger: TACCGCGGCCATGAAGAACCAGGTAGCGAGATTCAA...TATGTTGATTCTTTGTCTTACATAGAGCAGCAGCACTTTGGTAACCTGTGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTTTATTCACAGCATTGCTAAATCAGAAGCATTCACAGTTTCCCTCCGGACAAACTCCCGGGCTTaGTCTGATCATCTAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFIHSIAKSEAFTVSLRTNSRA*SDHLVS Trigger: AGAAACTAGATGATCAGACCAAGCCCGGGAGTTTGT...CCGGAGGGAAACTGTGAATGCTTCTGATTTAGCAATGCTGTGAATAAAAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS GCA 90 bp | CGGTGCGCACTAGCTCGCCAGGGTGGTCAGCTAGTACCTCCACCATaGTGCGGTCGCCGCTCCTCAGCTTGCTGGCCAGGGCGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RCALARQGGQLVPPP*CGRRSSACWPGRRR Trigger: GCGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCGGCGACCGCAGCATGGTGGAGGTACTAGCTGACCACCCTGGCGAGCTAGTGCGCACCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCCTGGGGAGGCTGGGGTaGAGCAGCGCGGCGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFPPGFFLVASKGPPGGVLGRLG*SSAAPV Trigger: CACCGGCGCCGCGCTGCTCAACCCCAGCCTCCCCAG...GACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CCA 90 bp | GTGGAGTGGTTCAAGGAGGCCCGAGGGTTGGGCGTGGGGGCTGGGTaGTGCGGGCTGACCCTCATGGCCGTGCGCCGCAGCTGCTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VEWFKEARGLGVGAG*CGLTLMAVRRSCSN Trigger: ATTGGAGCAGCTGCGGCGCACGGCCATGAGGGTCAGCCCGCACCACCCAGCCCCCACGCCCAACCCTCGGGCCTCCTTGAACCACTCCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGTCGCCGCTCCTCAGCTaGCTGGCCAGGGCGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SQFPSGILPGGLQGPSWRSPLLS*LARAAP Trigger: CGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCGGCGA...CCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCCCCAGTGCCACCACCTaGAAAGCGATGGGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGGLQGPSWRGLCMDGRPPSATT*KAMGRV Trigger: GACCCTGCCCATCGCTTTCAAGGTGGTGGCACTGGG...GGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS GCA 90 bp | TGCGCACTAGCTCGCCAGGGTGGTCAGCTAGTACCTCCACCATGCTaGGGTCGCCGCTCCTCAGCTTGCTGGCCAGGGCGGCGCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CALARQGGQLVPPPC*GRRSSACWPGRRRH Trigger: ATGGCGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCGGCGACCGCAGCATGGTGGAGGTACTAGCTGACCACCCTGGCGAGCTAGTGCGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCAGTCCCTCCCAGTGCCACCACCTaGAAAGCGATGGGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASKGPPGGVCAWTAGPVPPSATT*KAMGRV Trigger: GACCCTGCCCATCGCTTTCAAGGTGGTGGCACTGGG...AGGGACTGGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | CACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGCGCCGGTGGATGCGTaGGTGCAGGGCGGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSFPPGFFLVASKGPPGGAPVDA*VQGGRM Trigger: CATCCTGCCGCCCTGCACCAACGCATCCACCGGCGC...CCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS GCA 90 bp | GGGGCTGGGTGGTGCGGGCTGACCCTCATGGCCGTGCGCCGCAGCTaGTCCAATTCACTGAGCCGCTCGGAAAAGGACAAACTCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGWCGLTLMAVRRS*SNSLSRSEKDKLPG Trigger: GCCCGGGAGTTTGTCCTTTTCCGAGCGGCTCAGTGAATTGGAGCAGCTGCGGCGCACGGCCATGAGGGTCAGCCCGCACCACCCAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | ATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCTCGCCGCTCCTCAGCTaGCTGGCCAGGGCGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IHSFPPGFFLVASKGPPGSPLLS*LARAAP Trigger: CGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCGGCGA...GCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | CATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCTGGGGAGGCTGGGGTaGAGCAGCGCGGCGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSQFPSGILPGGLQGPSWLGRLG*SSAAPV Trigger: CACCGGCGCCGCGCTGCTCAACCCCAGCCTCCCCAG...CCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CCA 90 bp | GTGGGTCGCCGAAGGCGGTCAGGTCCGGAGCCGTTGAGAGTCGACTaGAAAGTTCTGCAGAGAGGCTGGTCATGCCGCTGGCACGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VGRRRRSGPEPLRVD*KVLQRGWSCRWHGR Trigger: CCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGGCTCCGGACCTGACCGCCTTCGGCGACCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CCA 90 bp | GATGCCGATGCCCGACGTGACGGGCGGCGAGTAGGTGAAGGCGCCTaGGTAGTGCATGCGCGGGTCGGAGATGGACGGCAGAGTAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DADARRDGRRVGEGA*VVHARVGDGRQSRE Trigger: TTCCCTACTCTGCCGTCCATCTCCGACCCGCGCATGCACTACCCAGGCGCCTTCACCTACTCGCCGCCCGTCACGTCGGGCATCGGCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGGGAGGCTGGGGTaGAGCAGCGCGGCGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EAFTVSLRDSSWWPPRALLGRLG*SSAAPV Trigger: CACCGGCGCCGCGCTGCTCAACCCCAGCCTCCCCAG...GAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCTCGCCGCTCCTCAGCTaGCTGGCCAGGGCGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SEAFTVSLRDSSWWPPRASPLLS*LARAAP Trigger: CGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCGGCGA...GGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTCTGTGCATGGACGGCAGGCCCATCCTGCATCTGACTTaGAGGCTGAGGGTTAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGGLQGPSWRGLCMDGRPILHLT*RLRVKG Trigger: GCCTTTAACCCTCAGCCTCAAAGTCAGATGCAGGAT...GGGCCTGCCGTCCATGCACAGACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCGCGCCGGTGGATGCGTaGGTGCAGGGCGGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EAFTVSLRDSSWWPPRALAPVDA*VQGGRM Trigger: CATCCTGCCGCCCTGCACCAACGCATCCACCGGCGC...GAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CCA 90 bp | GGTCCGGAGCCGTTGAGAGTCGACTGGAAAGTTCTGCAGAGAGGCTaGTCATGCCGCTGGCACGGCCGGGTGAAATGGGTGTCGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPEPLRVDWKVLQRG*SCRWHGRVKWVSLG Trigger: ACCCAGCGACACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGGCTCCGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS GCA 90 bp | GAGCCGTTGAGAGTCGACTGGAAAGTTCTGCAGAGAGGCTGGTCATaGCGCTGGCACGGCCGGGTGAAATGGGTGTCGCTGGGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: EPLRVDWKVLQRGWS*RWHGRVKWVSLGGQ Trigger: CTGTCCACCCAGCGACACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS TCA 90 bp | GGAAAGTTCTGCAGAGAGGCTGGTCATGCCGCTGGCACGGCCGGGTaGAATGGGTGTCGCTGGGTGGACAGAGGAAGAGGTGATGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GKFCREAGHAAGTAG*NGCRWVDRGRGDGS Trigger: GGATCCATCACCTCTTCCTCTGTCCACCCAGCGACACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS TCA 90 bp | CACGGCCGGGTGAAATGGGTGTCGCTGGGTGGACAGAGGAAGAGGTaGTGGATCCCAGGTACTGGTAGGACTGGTCATAGGACCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HGRVKWVSLGGQRKR*WIPGTGRTGHRTTV Trigger: CACCGTGGTCCTATGACCAGTCCTACCAGTACCTGGGATCCATCACCTCTTCCTCTGTCCACCCAGCGACACCCATTTCACCCGGCCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CCA 90 bp | TTGAGAGTCGACTGGAAAGTTCTGCAGAGAGGCTGGTCATGCCGCTaGCACGGCCGGGTGAAATGGGTGTCGCTGGGTGGACAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRVDWKVLQRGWSCR*HGRVKWVSLGGQRK Trigger: CTTCCTCTGTCCACCCAGCGACACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGACTCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGAGCGCCTCGCTCATCTaGCCGGGGCTCAGCGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KSEAFTVSLRDSSWWPPRSASLI*PGLSAV Trigger: CACCGCGCTGAGCCCCGGCAAGATGAGCGAGGCGCT...CCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | GAAATAAGAAATAGATGCCAAACAGGATGGGCTGCGTCTTCCCCACCCCGAACCGCGCCGGTGGATGCGTaGGTGCAGGGCGGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EIRNRCQTGWAASSPPRTAPVDA*VQGGRM Trigger: CATCCTGCCGCCCTGCACCAACGCATCCACCGGCGC...GGTTCGGGGTGGGGAAGACGCAGCCCATCCTGTTTGGCATCTATTTCTTATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CAA 90 bp | GATTCCACTAAGACTGGGAGAAGGAAACCGGCTCCTTCAGACTTTTGGGGTACAAGCGCCTCGCTCATCTaGCCGGGGCTCAGCGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSTKTGRRKPAPSDFWGTSASLI*PGLSAV Trigger: CACCGCGCTGAGCCCCGGCAAGATGAGCGAGGCGCT...TGTACCCCAAAAGTCTGAAGGAGCCGGTTTCCTTCTCCCAGTCTTAGTGGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGGGGTATGGTAGGTGGCAACTaGTGGCGGATTTGTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QFPSGILPGGLQGPSWRGMVGGN*WRICKD Trigger: GTCTTTACAAATCCGCCACAAGTTGCCACCTACCAT...ACCCCGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | CATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGTCAGGTCCGGAGCCGTaGAGAGTCGACTGGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSQFPSGILPGGLQGPSWSGPEP*RVDWKV Trigger: AACTTTCCAGTCGACTCTCAACGGCTCCGGACCTGA...CCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGCCCAGTGCCACCACCTaGAAAGCGATGGGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSEAFTVSLRDSSWWPPRPSATT*KAMGRV Trigger: GACCCTGCCCATCGCTTTCAAGGTGGTGGCACTGGG...CCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | CATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGACAAACCTGAGGTCGTaGAATCTCGCTACCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSQFPSGILPGGLQGPSWTNLRS*NLATWF Trigger: GAACCAGGTAGCGAGATTCAACGACCTCAGGTTTGT...CCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | TTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGCGATGGTAGGTGGCAACTaGTGGCGGATTTGTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FTVSLRDSSWWPPRALLAMVGGN*WRICKD Trigger: GTCTTTACAAATCCGCCACAAGTTGCCACCTACCAT...CGCCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | CATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGGCCCTCCTGGATCCTGCATCTGACTTaGAGGCTGAGGGTTAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSQFPSGILPGGLQGPSWILHLT*RLRVKG Trigger: GCCTTTAACCCTCAGCCTCAAAGTCAGATGCAGGAT...CCAGGAGGGCCCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | GGCACCTCTCTGAACCCTTTCAGGACAGAGTTTGCCTCTCTTTTTGAAGGGAAGTCAGGTCCGGAGCCGTaGAGAGTCGACTGGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTSLNPFRTEFASLFEGKSGPEP*RVDWKV Trigger: AACTTTCCAGTCGACTCTCAACGGCTCCGGACCTGA...CTTCCCTTCAAAAAGAGAGGCAAACTCTGTCCTGAAAGGGTTCAGAGAGGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CAA 90 bp | GAAATAAGAAATAGATGCCAAACAGGATGGGCTGCGTCTTCCCCACCCCGAACCACAAACCTGAGGTCGTaGAATCTCGCTACCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EIRNRCQTGWAASSPPRTTNLRS*NLATWF Trigger: GAACCAGGTAGCGAGATTCAACGACCTCAGGTTTGT...GGTTCGGGGTGGGGAAGACGCAGCCCATCCTGTTTGGCATCTATTTCTTATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 |
||
| CDS-3UTR CAA 90 bp | AAATCAGAAGCATTCACAGTTTCCCTCCGGGATTCTTCCTGGTGGCCTCCAAGGATGGTAGGTGGCAACTaGTGGCGGATTTGTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KSEAFTVSLRDSSWWPPRMVGGN*WRICKD Trigger: GTCTTTACAAATCCGCCACAAGTTGCCACCTACCAT...CCTTGGAGGCCACCAGGAAGAATCCCGGAGGGAAACTGTGAATGCTTCTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATTTTTCTGACAACACAGCTGTCAAAGTGTTCTGTGGAATAACTGAGTGGTCAGGTCCGGAGCCGTaGAGAGTCGACTGGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FYFSDNTAVKVFCGITEWSGPEP*RVDWKV Trigger: AACTTTCCAGTCGACTCTCAACGGCTCCGGACCTGA...CCACTCAGTTATTCCACAGAACACTTTGACAGCTGTGTTGTCAGAAAAATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023673.14 |
||
| CDS-3UTR CAA 90 bp | CCATGTTTATTACACCGACAGCTCACTTGTCTTGGTATTGACATGAAAAATTTAACAAACCTGAGGTCGTaGAATCTCGCTACCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCLLHRQLTCLGIDMKNLTNLRS*NLATWF Trigger: GAACCAGGTAGCGAGATTCAACGACCTCAGGTTTGT...TAAATTTTTCATGTCAATACCAAGACAAGTGAGCTGTCGGTGTAATAAACATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187242.3 |
||
| CDS CAA 72 bp | CCATCCGGGGCGCCCAGCGGCAGCGCCTCGCTCATCTaGCCGGGGCTCAGCGCGGTGGAAGGCGGCGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSGAPSGSASLI*PGLSAVEGGVK Trigger: CTTCACGCCGCCTTCCACCGCGCTGAGCCCCGGCAAGATGAGCGAGGCGCTGCCGCTGGGCGCCCCGGATGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 ENSMUST00000186296.2 |
||
| CDS CAA 72 bp | AGTACCTCCACCATGCTGCGGTCGCCGCTCCTCAGCTaGCTGGCCAGGGCGGCGCCGCCATCCGGGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: STSTMLRSPLLS*LARAAPPSGAP Trigger: GGGCGCCCCGGATGGCGGCGCCGCCCTGGCCAGCAAGCTGAGGAGCGGCGACCGCAGCATGGTGGAGGTACT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CCA 72 bp | TTCAAGGAGGCCCGAGGGTTGGGCGTGGGGGCTGGGTaGTGCGGGCTGACCCTCATGGCCGTGCGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FKEARGLGVGAG*CGLTLMAVRRS Trigger: GCTGCGGCGCACGGCCATGAGGGTCAGCCCGCACCACCCAGCCCCCACGCCCAACCCTCGGGCCTCCTTGAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
||
| CDS CAA 72 bp | AGGCTGGGGTTGAGCAGCGCGGCGCCGGTGGATGCGTaGGTGCAGGGCGGCAGGATGCGCGGGGGCGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLGLSSAAPVDA*VQGGRMRGGDL Trigger: GAGATCGCCCCCGCGCATCCTGCCGCCCTGCACCAACGCATCCACCGGCGCCGCGCTGCTCAACCCCAGCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CCA 72 bp | GCCCGACGTGACGGGCGGCGAGTAGGTGAAGGCGCCTaGGTAGTGCATGCGCGGGTCGGAGATGGACGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARRDGRRVGEGA*VVHARVGDGRQ Trigger: CTGCCGTCCATCTCCGACCCGCGCATGCACTACCCAGGCGCCTTCACCTACTCGCCGCCCGTCACGTCGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS GCA 72 bp | GCTCGCCAGGGTGGTCAGCTAGTACCTCCACCATGCTaGGGTCGCCGCTCCTCAGCTTGCTGGCCAGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ARQGGQLVPPPC*GRRSSACWPGR Trigger: CCGCCCTGGCCAGCAAGCTGAGGAGCGGCGACCGCAGCATGGTGGAGGTACTAGCTGACCACCCTGGCGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CCA 72 bp | ATGCGCGGGTCGGAGATGGACGGCAGAGTAGGGAACTaGCGTGGGTCGCCGAAGGCGGTCAGGTCCGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: MRGSEMDGRVGN*RGSPKAVRSGA Trigger: GGCTCCGGACCTGACCGCCTTCGGCGACCCACGCCAGTTCCCTACTCTGCCGTCCATCTCCGACCCGCGCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS TCA 72 bp | TCATCTTGCCGGGGCTCAGCGCGGTGGAAGGCGGCGTaGAGCGGCGGCTCGTGCTGGCATCTACGGGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: SSCRGSARWKAA*SGGSCWHLRGY Trigger: GTATCCCCGTAGATGCCAGCACGAGCCGCCGCTTCACGCCGCCTTCCACCGCGCTGAGCCCCGGCAAGATGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS GCA 72 bp | CTAGCTCGCCAGGGTGGTCAGCTAGTACCTCCACCATaGTGCGGTCGCCGCTCCTCAGCTTGCTGGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LARQGGQLVPPP*CGRRSSACWPG Trigger: CCCTGGCCAGCAAGCTGAGGAGCGGCGACCGCAGCATGGTGGAGGTACTAGCTGACCACCCTGGCGAGCTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS CAA 72 bp | GGCGTGGGTCGCCGAAGGCGGTCAGGTCCGGAGCCGTaGAGAGTCGACTGGAAAGTTCTGCAGAGAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GVGRRRRSGPEP*RVDWKVLQRGW Trigger: CCAGCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGGCTCCGGACCTGACCGCCTTCGGCGACCCACGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS TCA 72 bp | TGCAGAGAGGCTGGTCATGCCGCTGGCACGGCCGGGTaGAATGGGTGTCGCTGGGTGGACAGAGGAAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CREAGHAAGTAG*NGCRWVDRGRG Trigger: ACCTCTTCCTCTGTCCACCCAGCGACACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS TCA 72 bp | GCGTGGGTCGCCGAAGGCGGTCAGGTCCGGAGCCGTTaGGAGTCGACTGGAAAGTTCTGCAGAGAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AWVAEGGQVRSR*ESTGKFCREAG Trigger: ACCAGCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGGCTCCGGACCTGACCGCCTTCGGCGACCCACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
||
| CDS GCA 72 bp | TGGTGCGGGCTGACCCTCATGGCCGTGCGCCGCAGCTaGTCCAATTCACTGAGCCGCTCGGAAAAGGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: WCGLTLMAVRRS*SNSLSRSEKDK Trigger: TTTGTCCTTTTCCGAGCGGCTCAGTGAATTGGAGCAGCTGCGGCGCACGGCCATGAGGGTCAGCCCGCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
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| CDS CCA 72 bp | GACTGGAAAGTTCTGCAGAGAGGCTGGTCATGCCGCTaGCACGGCCGGGTGAAATGGGTGTCGCTGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: DWKVLQRGWSCR*HGRVKWVSLGG Trigger: TCCACCCAGCGACACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| CDS CCA 72 bp | CGAAGGCGGTCAGGTCCGGAGCCGTTGAGAGTCGACTaGAAAGTTCTGCAGAGAGGCTGGTCATGCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RRRSGPEPLRVD*KVLQRGWSCRW Trigger: CCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGGCTCCGGACCTGACCGCCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| CDS GCA 72 bp | AGAGTCGACTGGAAAGTTCTGCAGAGAGGCTGGTCATaGCGCTGGCACGGCCGGGTGAAATGGGTGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: RVDWKVLQRGWS*RWHGRVKWVSL Trigger: CAGCGACACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| CDS CCA 72 bp | CCGTTGAGAGTCGACTGGAAAGTTCTGCAGAGAGGCTaGTCATGCCGCTGGCACGGCCGGGTGAAATGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PLRVDWKVLQRG*SCRWHGRVKWV Trigger: CACCCATTTCACCCGGCCGTGCCAGCGGCATGACCAGCCTCTCTGCAGAACTTTCCAGTCGACTCTCAACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023673.14 ENSMUST00000113956.10 ENSMUST00000168195.8 |
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| CDS TCA 72 bp | AGCCGCTCGGAAAAGGACAAACTCCCGGGCTTGGTCTaGTCATCTAGTTTCTGCCGATGTCTTCGGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SRSEKDKLPGLV*SSSFCRCLRGS Trigger: AGAACCCCGAAGACATCGGCAGAAACTAGATGATCAGACCAAGCCCGGGAGTTTGTCCTTTTCCGAGCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
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| CDS CAA 72 bp | GGATGGCTGGATCTGCCTGGCATCCTGCATCTGACTTaGAGGCTGAGGGTTAAAGGCAGTGGAGTGGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: GWLDLPGILHLT*RLRVKGSGVVQ Trigger: TTGAACCACTCCACTGCCTTTAACCCTCAGCCTCAAAGTCAGATGCAGGATGCCAGGCAGATCCAGCCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023673.14 ENSMUST00000168195.8 |
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