Pregenerated sensors for RUNDC3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040570Ensembl transcript IDs: ENSMUST00000047485.15, ENSMUST00000115378.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACATGTGACACTGGTCATGTTACTATTGATTGATTCCACACCATaGGACTGCGCTCCAAGCACTTCCCAGAACCTCCCACCCCTACAC | + |
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Preference number: 1 (lower is better) Translates to: SHVTLVMLLLIDSTP*DCAPSTSQNLPPLH Trigger: GTGTAGGGGTGGGAGGTTCTGGGAAGTGCTTGGAGCGCAGTCTCATGGTGTGGAATCAATCAATAGTAACATGACCAGTGTCACATGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 90 bp | GAAATTGCTCAGTTTGTTCTGAGTCACCCGATGCAATGTCTGTCATaGGCTTGCAGGCCTCCTTTGCCCCAGAGATTAGTGTCTGCACTG | + |
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Preference number: 1 (lower is better) Translates to: EIAQFVLSHPMQCLS*ACRPPLPQRLVSAL Trigger: CAGTGCAGACACTAATCTCTGGGGCAAAGGAGGCCTGCAAGCTCATGACAGACATTGCATCGGGTGACTCAGAACAAACTGAGCAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CCA 90 bp | CAACTGGTAAAAGGAAAGCTTAACGAGCCACTGTGTAGTTGTGGCTaGAGACTTCCCCTTACAGCATGGTACACAGACATCAGAGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: QLVKGKLNEPLCSCG*RLPLTAWYTDIRVQ Trigger: CTGCACTCTGATGTCTGTGTACCATGCTGTAAGGGGAAGTCTCCAGCCACAACTACACAGTGGCTCGTTAAGCTTTCCTTTTACCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR GCA 90 bp | TCTGTCATGAGCTTGCAGGCCTCCTTTGCCCCAGAGATTAGTGTCTaGACTGCCTCACATGTGACACTGGTCATGTTACTATTGATTGAT | + |
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Preference number: 1 (lower is better) Translates to: SVMSLQASFAPEISV*TASHVTLVMLLLID Trigger: ATCAATCAATAGTAACATGACCAGTGTCACATGTGAGGCAGTGCAGACACTAATCTCTGGGGCAAAGGAGGCCTGCAAGCTCATGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR GCA 90 bp | AAGATGGAGGTGCTCTGTTTTAATGCATCAGCCTCAGGAAGAAATTaGTCAGTTTGTTCTGAGTCACCCGATGCAATGTCTGTCATGAGC | + |
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Preference number: 1 (lower is better) Translates to: KMEVLCFNASASGRN*SVCSESPDAMSVMS Trigger: GCTCATGACAGACATTGCATCGGGTGACTCAGAACAAACTGAGCAATTTCTTCCTGAGGCTGATGCATTAAAACAGAGCACCTCCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 90 bp | CGCAGCAGGGATATGTCACAAACTAGTGCTTCTATCGGACAGATCTaGAAAAGTGTACCAACTGGGGAATCTTGTATTCCCTTCTACTTT | + |
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Preference number: 1 (lower is better) Translates to: RSRDMSQTSASIGQI*KSVPTGESCIPFYF Trigger: AAAGTAGAAGGGAATACAAGATTCCCCAGTTGGTACACTTTTTCAGATCTGTCCGATAGAAGCACTAGTTTGTGACATATCCCTGCTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CCA 90 bp | AGTGAGCACTGTGGCCCCTTCATGAAACAGTATAGGAAATGTCTTTaGCACACTTGTTTTCCTCCTAGGACTCACTATAGAATACACACT | + |
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Preference number: 1 (lower is better) Translates to: SEHCGPFMKQYRKCL*HTCFPPRTHYRIHT Trigger: AGTGTGTATTCTATAGTGAGTCCTAGGAGGAAAACAAGTGTGCCAAAGACATTTCCTATACTGTTTCATGAAGGGGCCACAGTGCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR GCA 90 bp | TGGTACACAGACATCAGAGTGCAGGAAGTACTTCATGGAATTAGTTaGCTTTTGTGCAAATTTAACCACCAAATAAAGGAGCGAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: WYTDIRVQEVLHGIS*LLCKFNHQIKERKK Trigger: TTTCTTTCGCTCCTTTATTTGGTGGTTAAATTTGCACAAAAGGCAACTAATTCCATGAAGTACTTCCTGCACTCTGATGTCTGTGTACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 90 bp | ATAGCCAGCATTCTTTGTGGAGTTCTGAAAAATAAACAGTACCACTaGAAATTAAAGACTGAGACACTGTTCACTCATGCAAGCGTTACA | + |
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Preference number: 1 (lower is better) Translates to: IASILCGVLKNKQYH*KLKTETLFTHASVT Trigger: TGTAACGCTTGCATGAGTGAACAGTGTCTCAGTCTTTAATTTTCAGTGGTACTGTTTATTTTTCAGAACTCCACAAAGAATGCTGGCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGGAAAGCCATGATCCTCAGGTGTCATGTCTCAGTCCGCAGTTCGCAGCACCATCTAAGTCCTCATaGAGCCTGCTGCAGGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: WRESHDPQVSCLSPQFAAPSKSS*SLLQAC Trigger: GCAGGCCTGCAGCAGGCTGCATGAGGACTTAGATGG...TGCTGCGAACTGCGGACTGAGACATGACACCTGAGGATCATGGCTTTCCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGGAAAGCCATGATCCTCAGGTGTCATGTCTCAGTCCGCAGTTCGCAGCACTCTGGAGTAAAACCTaGACCTGGTCTCTGGACACC | + |
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Preference number: 2 (lower is better) Translates to: WRESHDPQVSCLSPQFAALWSKT*TWSLDT Trigger: GGTGTCCAGAGACCAGGTCCAGGTTTTACTCCAGAG...TGCTGCGAACTGCGGACTGAGACATGACACCTGAGGATCATGGCTTTCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTCATGACCATCTAAGTCCTCATGCAGCCTGCTGCAGGCCTGCTGTCTTTCTGTGTAGTTGTGGCTaGAGACTTCCCCTTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: CSHDHLSPHAACCRPAVFLCSCG*RLPLTA Trigger: TGCTGTAAGGGGAAGTCTCCAGCCACAACTACACAG...AAAGACAGCAGGCCTGCAGCAGGCTGCATGAGGACTTAGATGGTCATGAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTCATGACCATCTAAGTCCTCATGCAGCCTGCTGCAGGCCTGCTGTCTTTCCTCAGAAATTTACATaGGCTGGACTAAAATCTCCA | + |
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Preference number: 2 (lower is better) Translates to: CSHDHLSPHAACCRPAVFPQKFT*AGLKSP Trigger: TGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGG...AAAGACAGCAGGCCTGCAGCAGGCTGCATGAGGACTTAGATGGTCATGAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR CCA 90 bp | AGATGCTTTTCCTCCATACCTGACAAATTAAGTCAGCAACCGCCTAAAAAGGCACTTCCCCTTACAGCATaGTACACAGACATCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: RCFSSIPDKLSQQPPKKALPLTA*YTDIRV Trigger: CACTCTGATGTCTGTGTACCATGCTGTAAGGGGAAG...TGCCTTTTTAGGCGGTTGCTGACTTAATTTGTCAGGTATGGAGGAAAAGCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR GCA 90 bp | AGATGCTTTTCCTCCATACCTGACAAATTAAGTCAGCAACCGCCTAAAAAGGCAACACAGACATCAGAGTaGAGGAAGTACTTCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: RCFSSIPDKLSQQPPKKATQTSE*RKYFME Trigger: TTCCATGAAGTACTTCCTGCACTCTGATGTCTGTGT...TGCCTTTTTAGGCGGTTGCTGACTTAATTTGTCAGGTATGGAGGAAAAGCATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTTGGCACACTTGTTTTCCTCCTAGGACTCACTATAGAATACACACTTCACACAGTCAGACATCCTaGTTACTCTGCAGCTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: CLWHTCFPPRTHYRIHTSHSQTS*LLCSSL Trigger: TAAAGAGCTGCAGAGTAACCAGGATGTCTGACTGTG...TGAAGTGTGTATTCTATAGTGAGTCCTAGGAGGAAAACAAGTGTGCCAAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CAA 90 bp | ACAGACATCAGAGTGCAGGAAGTACTTCATGGAATTAGTTGCCTTTaGTGCAAATTTAACCACCAAATAAAGGAGCGAAAGAAACTGCTA | + |
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Preference number: 2 (lower is better) Translates to: TDIRVQEVLHGISCL*CKFNHQIKERKKLL Trigger: TAGCAGTTTCTTTCGCTCCTTTATTTGGTGGTTAAATTTGCACAAAAGGCAACTAATTCCATGAAGTACTTCCTGCACTCTGATGTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR GCA 90 bp | GTGGTAATGGCTATGAAACACCCAGTATGTAAGTCATTGTTGCACACAGGGAAAAATAGGGGACTACTATaGTTTTCCCTCAGAAATTTA | + |
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Preference number: 2 (lower is better) Translates to: VVMAMKHPVCKSLLHTGKNRGLL*FSLRNL Trigger: TAAATTTCTGAGGGAAAAGCATAGTAGTCCCCTATT...TTTCCCTGTGTGCAACAATGACTTACATACTGGGTGTTTCATAGCCATTACCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 72 bp | TGCGCCCACGGCCAGCCTAAATTCCCAATGTTCTCATaGCCATCTAAGTCCTCATGCAGCCTGCTGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: CAHGQPKFPMFS*PSKSSCSLLQA Trigger: GGCCTGCAGCAGGCTGCATGAGGACTTAGATGGTCATGAGAACATTGGGAATTTAGGCTGGCCGTGGGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR CAA 90 bp | GCCATGATCCTCAGGTGTCATGTCTCAGTCCGCAGTTCGCAGCAGGGATATGTCGGATGCACTTCCTACTaGTCACAGCTGCTAAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: AMILRCHVSVRSSQQGYVGCTSY*SQLLSL Trigger: TAAACTTAGCAGCTGTGACAAGTAGGAAGTGCATCC...GACATATCCCTGCTGCGAACTGCGGACTGAGACATGACACCTGAGGATCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 72 bp | CAGTTTGTTCTGAGTCACCCGATGCAATGTCTGTCATaGGCTTGCAGGCCTCCTTTGCCCCAGAGATTAGTG | + |
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Preference number: 3 (lower is better) Translates to: QFVLSHPMQCLS*ACRPPLPQRLV Trigger: CACTAATCTCTGGGGCAAAGGAGGCCTGCAAGCTCATGACAGACATTGCATCGGGTGACTCAGAACAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 72 bp | ACACTGGTCATGTTACTATTGATTGATTCCACACCATaGGACTGCGCTCCAAGCACTTCCCAGAACCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: TLVMLLLIDSTP*DCAPSTSQNLP Trigger: TGGGAGGTTCTGGGAAGTGCTTGGAGCGCAGTCTCATGGTGTGGAATCAATCAATAGTAACATGACCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CCA 72 bp | CTGTGTAGTTGTGGCTGGAGACTTCCCCTTACAGCATaGTACACAGACATCAGAGTGCAGGAAGTACTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LCSCGWRLPLTA*YTDIRVQEVLH Trigger: ATGAAGTACTTCCTGCACTCTGATGTCTGTGTACCATGCTGTAAGGGGAAGTCTCCAGCCACAACTACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR-3UTR CAA 90 bp | GCCATGATCCTCAGGTGTCATGTCTCAGTCCGCAGTTCGCAGCAGGGATATGTCGGAATTAGTTGCCTTTaGTGCAAATTTAACCACCAA | + |
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Preference number: 3 (lower is better) Translates to: AMILRCHVSVRSSQQGYVGISCL*CKFNHQ Trigger: TTGGTGGTTAAATTTGCACAAAAGGCAACTAATTCC...GACATATCCCTGCTGCGAACTGCGGACTGAGACATGACACCTGAGGATCATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 72 bp | TGCCTCACATGTGACACTGGTCATGTTACTATTGATTaGTTCCACACCATGAGACTGCGCTCCAAGCACTTC | + |
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Preference number: 3 (lower is better) Translates to: CLTCDTGHVTID*FHTMRLRSKHF Trigger: GAAGTGCTTGGAGCGCAGTCTCATGGTGTGGAATCAATCAATAGTAACATGACCAGTGTCACATGTGAGGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 72 bp | TTTATATCAAGAGCTCCAATAATGGAGGGAAAGCCATaGTCCTCAGGTGTCATGTCTCAGTCCGCAGTTCGC | + |
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Preference number: 3 (lower is better) Translates to: FISRAPIMEGKP*SSGVMSQSAVR Trigger: GCGAACTGCGGACTGAGACATGACACCTGAGGATCATGGCTTTCCCTCCATTATTGGAGCTCTTGATATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CCA 72 bp | ATAAAGGAGCGAAAGAAACTGCTAAGCTTAAGTCTCTaGAGTAAAACCTGGACCTGGTCTCTGGACACCAAG | + |
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Preference number: 3 (lower is better) Translates to: IKERKKLLSLSL*SKTWTWSLDTK Trigger: CTTGGTGTCCAGAGACCAGGTCCAGGTTTTACTCCAGAGACTTAAGCTTAGCAGTTTCTTTCGCTCCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CCA 72 bp | TACTTAAACGTGGCTTTGGCCACTGTACACTTAATATaGTGCACACAGATCAGAGAAGATGGAGGTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: YLNVALATVHLI*CTQIREDGGAL Trigger: CAGAGCACCTCCATCTTCTCTGATCTGTGTGCACCATATTAAGTGTACAGTGGCCAAAGCCACGTTTAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR GCA 72 bp | GACTTCCCCTTACAGCATGGTACACAGACATCAGAGTaGAGGAAGTACTTCATGGAATTAGTTGCCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: DFPLQHGTQTSE*RKYFMELVAFC Trigger: ACAAAAGGCAACTAATTCCATGAAGTACTTCCTGCACTCTGATGTCTGTGTACCATGCTGTAAGGGGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR GCA 72 bp | TTAAACGTGGCTTTGGCCACTGTACACTTAATATGGTaGACACAGATCAGAGAAGATGGAGGTGCTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: LNVALATVHLIW*TQIREDGGALF Trigger: AAACAGAGCACCTCCATCTTCTCTGATCTGTGTGCACCATATTAAGTGTACAGTGGCCAAAGCCACGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 72 bp | AATCAACAGACAAGAGTGAGCACTGTGGCCCCTTCATaGAACAGTATAGGAAATGTCTTTGGCACACTTGTT | + |
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Preference number: 3 (lower is better) Translates to: NQQTRVSTVAPS*NSIGNVFGTLV Trigger: AACAAGTGTGCCAAAGACATTTCCTATACTGTTTCATGAAGGGGCCACAGTGCTCACTCTTGTCTGTTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CCA 72 bp | CTGCTAAGCTTAAGTCTCTGGAGTAAAACCTGGACCTaGTCTCTGGACACCAAGACGCATTTAAACAAATAT | + |
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Preference number: 3 (lower is better) Translates to: LLSLSLWSKTWT*SLDTKTHLNKY Trigger: ATATTTGTTTAAATGCGTCTTGGTGTCCAGAGACCAGGTCCAGGTTTTACTCCAGAGACTTAAGCTTAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CCA 72 bp | TGTACACTTAATATGGTGCACACAGATCAGAGAAGATaGAGGTGCTCTGTTTTAATGCATCAGCCTCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: CTLNMVHTDQRR*RCSVLMHQPQE Trigger: TTCCTGAGGCTGATGCATTAAAACAGAGCACCTCCATCTTCTCTGATCTGTGTGCACCATATTAAGTGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR TCA 72 bp | GATATGTCACAAACTAGTGCTTCTATCGGACAGATCTaGAAAAGTGTACCAACTGGGGAATCTTGTATTCCC | + |
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Preference number: 3 (lower is better) Translates to: DMSQTSASIGQI*KSVPTGESCIP Trigger: GGGAATACAAGATTCCCCAGTTGGTACACTTTTTCAGATCTGTCCGATAGAAGCACTAGTTTGTGACATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR GCA 72 bp | CTTAATATGGTGCACACAGATCAGAGAAGATGGAGGTaGTCTGTTTTAATGCATCAGCCTCAGGAAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: LNMVHTDQRRWR*SVLMHQPQEEI Trigger: AATTTCTTCCTGAGGCTGATGCATTAAAACAGAGCACCTCCATCTTCTCTGATCTGTGTGCACCATATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR GCA 72 bp | GACATCAGAGTGCAGGAAGTACTTCATGGAATTAGTTaGCTTTTGTGCAAATTTAACCACCAAATAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: DIRVQEVLHGIS*LLCKFNHQIKE Trigger: CTCCTTTATTTGGTGGTTAAATTTGCACAAAAGGCAACTAATTCCATGAAGTACTTCCTGCACTCTGATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR GCA 72 bp | AATGTTTCCAATGTCTTAGGCATACCTGGGAAAAGATaGTTTTCCTCCATACCTGACAAATTAAGTCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: NVSNVLGIPGKR*FSSIPDKLSQQ Trigger: TTGCTGACTTAATTTGTCAGGTATGGAGGAAAAGCATCTTTTCCCAGGTATGCCTAAGACATTGGAAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CCA 72 bp | TGCTTCTATCGGACAGATCTGAAAAAGTGTACCAACTaGGGAATCTTGTATTCCCTTCTACTTTATAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: CFYRTDLKKCTN*GILYSLLLYKN Trigger: ATTTTTATAAAGTAGAAGGGAATACAAGATTCCCCAGTTGGTACACTTTTTCAGATCTGTCCGATAGAAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR TCA 90 bp | TGGAGGGAAAGCCATGATCCTCAGGTGTCATGTCTCAGTCCGCAGTTCGCAGCAGTGGCTGGGATCCAATaGGGCCTGAGAAAGGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: WRESHDPQVSCLSPQFAAVAGIQ*GLRKAN Trigger: GTTAGCCTTTCTCAGGCCTCATTGGATCCCAGCCAC...TGCTGCGAACTGCGGACTGAGACATGACACCTGAGGATCATGGCTTTCCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CAA 72 bp | CTCCAAGCACTTCCCAGAACCTCCCACCCCTACACTTaGGATAGAAGGAGTGAACCTGTGAGTTCAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: LQALPRTSHPYT*DRRSEPVSSAL Trigger: GAGTGCTGAACTCACAGGTTCACTCCTTCTATCCAAAGTGTAGGGGTGGGAGGTTCTGGGAAGTGCTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CAA 72 bp | TGTTCTGAGTCACCCGATGCAATGTCTGTCATGAGCTaGCAGGCCTCCTTTGCCCCAGAGATTAGTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: CSESPDAMSVMS*QASFAPEISVC Trigger: GCAGACACTAATCTCTGGGGCAAAGGAGGCCTGCAAGCTCATGACAGACATTGCATCGGGTGACTCAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR TCA 90 bp | TCCCAATGTTCTCATGACCATCTAAGTCCTCATGCAGCCTGCTGCAGGCCTGCTAAAATCTGCACACGGTaGTCAGGTTCCTCCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SQCSHDHLSPHAACCRPAKICTR*SGSSSP Trigger: TGGAGAGGAGGAACCTGATCACCGTGTGCAGATTTT...AGCAGGCCTGCAGCAGGCTGCATGAGGACTTAGATGGTCATGAGAACATTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR TCA 90 bp | TGTTCTCATGACCATCTAAGTCCTCATGCAGCCTGCTGCAGGCCTGCTGTCTTTTCCGGCAAGCCACTCTaGTATAGTCCCAGAAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: CSHDHLSPHAACCRPAVFSGKPL*YSPRSY Trigger: GTAGCTTCTGGGACTATATCAGAGTGGCTTGCCGGA...AAAGACAGCAGGCCTGCAGCAGGCTGCATGAGGACTTAGATGGTCATGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR TCA 90 bp | CAGCCTCAGGAAGAAATTGCTCAGTTTGTTCTGAGTCACCCGATGCAATGTCTGTGCTCCCAAACGTCCTaGGTTCCTCCTCGTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: QPQEEIAQFVLSHPMQCLCSQTS*VPPRHC Trigger: GCAGTGACGAGGAGGAACTCAGGACGTTTGGGAGCA...CAGACATTGCATCGGGTGACTCAGAACAAACTGAGCAATTTCTTCCTGAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| 3UTR CAA 72 bp | TCCTCATGCAGCCTGCTGCAGGCCTGCTGTCTTTATTaGCTATTCCTGACACTACTTAAACGTGGCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSCSLLQACCLY*LFLTLLKRGFG Trigger: GCCAAAGCCACGTTTAAGTAGTGTCAGGAATAGCAAATAAAGACAGCAGGCCTGCAGCAGGCTGCATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR CCA 90 bp | TCCCAATGTTCTCATGACCATCTAAGTCCTCATGCAGCCTGCTGCAGGCCTGCTTCTTTCTCCAATTTGTaGGCCAGATCAGAATCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SQCSHDHLSPHAACCRPASFSNL*ARSESS Trigger: CGAAGATTCTGATCTGGCCCACAAATTGGAGAAAGA...AGCAGGCCTGCAGCAGGCTGCATGAGGACTTAGATGGTCATGAGAACATTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR CCA 90 bp | CAGGCCTGCTGTCTTTATTTGCTATTCCTGACACTACTTAAACGTGGCTTTGGCTCTCCTTCTTGTGAGTaGCTGGGATCCAATGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QACCLYLLFLTLLKRGFGSPSCE*LGSNEA Trigger: GGCCTCATTGGATCCCAGCCACTCACAAGAAGGAGA...GCCAAAGCCACGTTTAAGTAGTGTCAGGAATAGCAAATAAAGACAGCAGGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR GCA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAATCTCCACCGCAGCGTTaGGGGCGCTCAGGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKSPPQR*GRSGSS Trigger: AGAAGAGCCTGAGCGCCCGCAACGCTGCGGTGGAGA...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR GCA 90 bp | TGCTGTCTTTATTTGCTATTCCTGACACTACTTAAACGTGGCTTTGGCCACTGTCCACATTCTCTGGGGTaGTGCTCTCACTGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCLYLLFLTLLKRGFGHCPHSLG*CSHCHC Trigger: GCAGTGACAGTGAGAGCAGCACCCCAGAGAATGTGG...ACAGTGGCCAAAGCCACGTTTAAGTAGTGTCAGGAATAGCAAATAAAGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR GCA 90 bp | TATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAACCTGGGGAGGGCCACTaGTTGGTGAGGTGGGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YAFPSEIYMGWTKISKQQPGEGH*LVRWAV Trigger: AACTGCCCACCTCACCAAGCAGTGGCCCTCCCCAGG...TTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGTGCTCCCAAACGTCCTaGGTTCCTCCTCGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQCSQTS*VPPRHC Trigger: GCAGTGACGAGGAGGAACTCAGGACGTTTGGGAGCA...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR GCA 90 bp | GAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTATCTCCACCGCAGCGTTaGGGGCGCTCAGGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIYMGWTKISKQQNVTHVSPPQR*GRSGSS Trigger: AGAAGAGCCTGAGCGCCCGCAACGCTGCGGTGGAGA...TACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAAAGCCATGATCCTCAGGTGTCATGTCTCAGTCCGCAGTTCGCAGCATTGTTCCAGAACAGCTaGAAAGTTATTAAATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRESHDPQVSCLSPQFAALFQNS*KVIKFR Trigger: CCTGAATTTAATAACTTTGCAGCTGTTCTGGAACAA...TGCTGCGAACTGCGGACTGAGACATGACACCTGAGGATCATGGCTTTCCCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR CCA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGCGGTCCCACATTCTCTaGGGTGCTGCTCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQRSHIL*GAALTV Trigger: GACAGTGAGAGCAGCACCCCAGAGAATGTGGGACCG...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTTGGCACACTTGTTTTCCTCCTAGGACTCACTATAGAATACACACTTCACTTGTAACTTGCCACTaGTGTCAGGGACCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLWHTCFPPRTHYRIHTSLVTCH*CQGPTE Trigger: CTCTGTGGGTCCCTGACATCAGTGGCAAGTTACAAG...TGAAGTGTGTATTCTATAGTGAGTCCTAGGAGGAAAACAAGTGTGCCAAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCAGGAAGAAATTGCTCAGTTTGTTCTGAGTCACCCGATGCAATGTCTGATGTTTTTCCATGAGTaGTACTCTGATCCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPQEEIAQFVLSHPMQCLMFFHE*YSDPGS Trigger: AGAGCCTGGATCAGAGTAGCACTCATGGAAAAACAT...CAGACATTGCATCGGGTGACTCAGAACAAACTGAGCAATTTCTTCCTGAGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCAGGAAGAAATTGCTCAGTTTGTTCTGAGTCACCCGATGCAATGTCTGCTTCACCCAAGACAATaGCTCCATCTTCATAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QPQEEIAQFVLSHPMQCLLHPRQ*LHLHKT Trigger: GGTTTTATGAAGATGGAGCCATTGTCTTGGGTGAAG...CAGACATTGCATCGGGTGACTCAGAACAAACTGAGCAATTTCTTCCTGAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR CCA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAATGGTTAGCTCCGTGGTaGGGCTTGCAAGGCAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKWLAPW*GLQGSR Trigger: ACGACTGCCTTGCAAGCCCCACCACGGAGCTAACCA...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGACATCCAGAGCTCCTaGGGAGGGCCACTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEIYMGWTKISKQQNVTHDIQSS*GGPLLG Trigger: ACCAAGCAGTGGCCCTCCCCAGGAGCTCTGGATGTC...ATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCTTTATTTGCTATTCCTGACACTACTTAAACGTGGCTTTGGCCACTGTCTCTCTTGCACTTGTTaGACCAGGTGTTCTCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CCLYLLFLTLLKRGFGHCLSCTC*TRCSRL Trigger: TAGACGAGAACACCTGGTTCAACAAGTGCAAGAGAG...ACAGTGGCCAAAGCCACGTTTAAGTAGTGTCAGGAATAGCAAATAAAGACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR TCA 90 bp | GTCTTTGGCACACTTGTTTTCCTCCTAGGACTCACTATAGAATACACACTTCATGGATCCAATGAGGCCTaGGAAAGGCTAACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFGTLVFLLGLTIEYTLHGSNEA*ERLTSA Trigger: AGCAGAAGTTAGCCTTTCTCAGGCCTCATTGGATCC...ATGAAGTGTGTATTCTATAGTGAGTCCTAGGAGGAAAACAAGTGTGCCAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR TCA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAGTGGCTGGGATCCAATaGGGCCTGAGAAAGGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKVAGIQ*GLRKAN Trigger: GTTAGCCTTTCTCAGGCCTCATTGGATCCCAGCCAC...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAGGGCCACTGCTTGGTaGGGTGGGCAGTTAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YAFPSEIYMGWTKISKQQRATAW*GGQLTL Trigger: AAGAGTTAACTGCCCACCTCACCAAGCAGTGGCCCT...TTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | GAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAAGGCAACAGCATTaGCATCCAGAGCTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EIYMGWTKISKQQNVTHVPRQQH*HPELLG Trigger: CCCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGG...TACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATTGGTTAGCTCCGTGGTaGGGCTTGCAAGGCAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SEIYMGWTKISKQQNVTHWLAPW*GLQGSR Trigger: ACGACTGCCTTGCAAGCCCCACCACGGAGCTAACCA...ATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAACTTGTAACTTGCCACTaGTGTCAGGGACCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YAFPSEIYMGWTKISKQQLVTCH*CQGPTE Trigger: CTCTGTGGGTCCCTGACATCAGTGGCAAGTTACAAG...TTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR GCA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGTCACAGCAGGGAAGGTaGCATCTAATCCTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQSQQGR*HLILLP Trigger: AGGGAGAAGGATTAGATGGCACCTTCCCTGCTGTGA...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATCCACATTCTCTGGGGTaGTGCTCTCACTGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEIYMGWTKISKQQNVTHPHSLG*CSHCHC Trigger: GCAGTGACAGTGAGAGCAGCACCCCAGAGAATGTGG...ATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR CCA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGGTCCCAGAAGCTACGTaGGCTTTCATAGCCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQVPEAT*AFIAKP Trigger: TGGTTTGGCTATGAAAGCCCACGTAGCTTCTGGGAC...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTATCCGGCAAGCCACTCTaGTATAGTCCCAGAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FPQKFTWAGLKSPNNKMLSGKPL*YSPRSY Trigger: GTAGCTTCTGGGACTATATCAGAGTGGCTTGCCGGA...TAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTTGGCACACTTGTTTTCCTCCTAGGACTCACTATAGAATACACACTTCAACAGATACAGTTTTGTaGAACTTTCCGGCAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLWHTCFPPRTHYRIHTSTDTVL*NFPASH Trigger: GTGGCTTGCCGGAAAGTTTCACAAAACTGTATCTGT...TGAAGTGTGTATTCTATAGTGAGTCCTAGGAGGAAAACAAGTGTGCCAAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCTTTATTTGCTATTCCTGACACTACTTAAACGTGGCTTTGGCCACTGTGCCAGCAAGCATATTTaGTTCTTCACCCAAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CCLYLLFLTLLKRGFGHCASKHI*FFTQDN Trigger: ATTGTCTTGGGTGAAGAAGCAAATATGCTTGCTGGC...ACAGTGGCCAAAGCCACGTTTAAGTAGTGTCAGGAATAGCAAATAAAGACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGAATATATCACAGCAGGGAAGGTaGCATCTAATCCTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGLKSPNNKMLRMYQNISQQGR*HLILLP Trigger: AGGGAGAAGGATTAGATGGCACCTTCCCTGCTGTGA...TATATTCTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCTTTATTTGCTATTCCTGACACTACTTAAACGTGGCTTTGGCCACTGTGTAAGCTGGTATTTCTaGCTTACTCTCTTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCLYLLFLTLLKRGFGHCVSWYF*LTLLHL Trigger: CAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTAC...ACAGTGGCCAAAGCCACGTTTAAGTAGTGTCAGGAATAGCAAATAAAGACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGAATATAGTCCCAGAAGCTACGTaGGCTTTCATAGCCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: WAGLKSPNNKMLRMYQNIVPEAT*AFIAKP Trigger: TGGTTTGGCTATGAAAGCCCACGTAGCTTCTGGGAC...TATATTCTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTGGCACACTTGTTTTCCTCCTAGGACTCACTATAGAATACACACTTCAACAGATTCAGAAAGTTaGTTCTCACGAAGCCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLWHTCFPPRTHYRIHTSTDSES*FSRSRK Trigger: CTTGCGGCTTCGTGAGAACCAACTTTCTGAATCTGT...TGAAGTGTGTATTCTATAGTGAGTCCTAGGAGGAAAACAAGTGTGCCAAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR CCA 90 bp | TCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATTCTCCTTCTTGTGAGTaGCTGGGATCCAATGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEIYMGWTKISKQQNVTHSPSCE*LGSNEA Trigger: GGCCTCATTGGATCCCAGCCACTCACAAGAAGGAGA...ATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR CCA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGCACTGCTTGGTGAGGTaGGCAGTTAACTCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQHCLVR*AVNSCL Trigger: AAGACAAGAGTTAACTGCCCACCTCACCAAGCAGTG...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTAAAAATCTGCACACGGTaGTCAGGTTCCTCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPQKFTWAGLKSPNNKMLKICTR*SGSSSP Trigger: TGGAGAGGAGGAACCTGATCACCGTGTGCAGATTTT...TAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTAGGATCCAATGAGGCCTaGGAAAGGCTAACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPQKFTWAGLKSPNNKMLGSNEA*ERLTSA Trigger: AGCAGAAGTTAGCCTTTCTCAGGCCTCATTGGATCC...TAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR TCA 90 bp | GAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACTCTCTTGCACTTGTTaGACCAGGTGTTCTCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EIYMGWTKISKQQNVTHVLSCTC*TRCSRL Trigger: TAGACGAGAACACCTGGTTCAACAAGTGCAAGAGAG...TACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAACAGATTCAGAAAGTTaGTTCTCACGAAGCCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKTDSES*FSRSRK Trigger: CTTGCGGCTTCGTGAGAACCAACTTTCTGAATCTGT...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR CCA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGTCTTTCTCCAATTTGTaGGCCAGATCAGAATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQSFSNL*ARSESS Trigger: CGAAGATTCTGATCTGGCCCACAAATTGGAGAAAGA...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAGTAAGCTGGTATTTCTaGCTTACTCTCTTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKVSWYF*LTLLHL Trigger: CAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTAC...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAACTTCACCCAAGACAATaGCTCCATCTTCATAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKLHPRQ*LHLHKT Trigger: GGTTTTATGAAGATGGAGCCATTGTCTTGGGTGAAG...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| 3UTR CAA 72 bp | AGAGTGCAGGAAGTACTTCATGGAATTAGTTGCCTTTaGTGCAAATTTAACCACCAAATAAAGGAGCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVQEVLHGISCL*CKFNHQIKERK Trigger: CTTTCGCTCCTTTATTTGGTGGTTAAATTTGCACAAAAGGCAACTAATTCCATGAAGTACTTCCTGCACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTAGCCAGCAAGCATATTTaGTTCTTCACCCAAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPQKFTWAGLKSPNNKMLASKHI*FFTQDN Trigger: ATTGTCTTGGGTGAAGAAGCAAATATGCTTGCTGGC...TAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| 3UTR CAA 72 bp | TTCATTAAACTGGAAACTTCTGAGGTTAGTAACCCCTaGCCAACATTAGTTCTGAAGTTTGAAATGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIKLETSEVSNP*PTLVLKFEMFP Trigger: TGGAAACATTTCAAACTTCAGAACTAATGTTGGCAAGGGGTTACTAACCTCAGAAGTTTCCAGTTTAATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS-3UTR GCA 90 bp | TCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATTTGTTCCAGAACAGCTaGAAAGTTATTAAATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEIYMGWTKISKQQNVTHLFQNS*KVIKFR Trigger: CCTGAATTTAATAACTTTGCAGCTGTTCTGGAACAA...ATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS CCA 90 bp | GGCCTGGGCTGGTTAGCTCCGTGGTGGGGCTTGCAAGGCAGTCGTTaGATTTTAGGCTTGTTAGGGACTTGTAACTTGCCACTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLGWLAPWWGLQGSR*ILGLLGTCNLPLMS Trigger: TGACATCAGTGGCAAGTTACAAGTCCCTAACAAGCCTAAAATCCAACGACTGCCTTGCAAGCCCCACCACGGAGCTAACCAGCCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTAAGTTTAAATATAAAAATCAACAGACAAGAGTGAGCACTGTGGCCCCTCTCTCCACCGCAGCGTaGCGGGCGCTCAGGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAKFKYKNQQTRVSTVAPLSTAA*RALRLF Trigger: GAAGAGCCTGAGCGCCCGCAACGCTGCGGTGGAGAG...AGGGGCCACAGTGCTCACTCTTGTCTGTTGATTTTTATATTTAAACTTAGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
||
| CDS GCA 90 bp | TCCAAGGCAACAGCATTGACATCCAGAGCTCCTGGGGAGGGCCACTaGTTGGTGAGGTGGGCAGTTAACTCTTGTCTTGATCTTAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SKATALTSRAPGEGH*LVRWAVNSCLDLKS Trigger: TGATTTAAGATCAAGACAAGAGTTAACTGCCCACCTCACCAAGCAGTGGCCCTCCCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAACTCTCCACCGCAGCGTaGCGGGCGCTCAGGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKLSTAA*RALRLF Trigger: GAAGAGCCTGAGCGCCCGCAACGCTGCGGTGGAGAG...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS CCA 90 bp | GCATTGACATCCAGAGCTCCTGGGGAGGGCCACTGCTTGGTGAGGTaGGCAGTTAACTCTTGTCTTGATCTTAAATCATTATTCTTTAGT | + |
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Preference number: 5 (lower is better) Translates to: ALTSRAPGEGHCLVR*AVNSCLDLKSLFFS Trigger: ACTAAAGAATAATGATTTAAGATCAAGACAAGAGTTAACTGCCCACCTCACCAAGCAGTGGCCCTCCCCAGGAGCTCTGGATGTCAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | GAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTAGGGGAGGGCCACTGCTaGGTGAGGTGGGCAGTTAAC | + |
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Preference number: 5 (lower is better) Translates to: EIYMGWTKISKQQNVTHVGEGHC*VRWAVN Trigger: GTTAACTGCCCACCTCACCAAGCAGTGGCCCTCCCC...TACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
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| CDS GCA 90 bp | TCTCAAAGCTGTAGAGATGTATTCAGACAAATGTTTTTCCATGAGTaGTACTCTGATCCAGGCTCTACCCTTAGCTCTGGAGGAGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: SQSCRDVFRQMFFHE*YSDPGSTLSSGGAD Trigger: GTCAGCTCCTCCAGAGCTAAGGGTAGAGCCTGGATCAGAGTAGCACTCATGGAAAAACATTTGTCTGAATACATCTCTACAGCTTTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | AGATGCTTTTCCTCCATACCTGACAAATTAAGTCAGCAACCGCCTAAAAAGGCATTAGGGACTTGTAACTaGCCACTGATGTCAGGGACC | + |
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Preference number: 5 (lower is better) Translates to: RCFSSIPDKLSQQPPKKALGTCN*PLMSGT Trigger: GGTCCCTGACATCAGTGGCAAGTTACAAGTCCCTAA...TGCCTTTTTAGGCGGTTGCTGACTTAATTTGTCAGGTATGGAGGAAAAGCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS TCA 90 bp | CAATACTACAGATACAGTTTTGTGAAACTTTCCGGCAAGCCACTCTaGTATAGTCCCAGAAGCTACGTGGGCTTTCATAGCCAAACCATG | + |
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Preference number: 5 (lower is better) Translates to: QYYRYSFVKLSGKPL*YSPRSYVGFHSQTM Trigger: CATGGTTTGGCTATGAAAGCCCACGTAGCTTCTGGGACTATATCAGAGTGGCTTGCCGGAAAGTTTCACAAAACTGTATCTGTAGTATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS GCA 90 bp | GAAGTCAATAGCATTGAGTCCAAGCAGCATGCCAGCAAGCATATTTaGTTCTTCACCCAAGACAATGGCTCCATCTTCATAAAACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: EVNSIESKQHASKHI*FFTQDNGSIFIKPP Trigger: AGGAGGTTTTATGAAGATGGAGCCATTGTCTTGGGTGAAGAAGCAAATATGCTTGCTGGCATGCTGCTTGGACTCAATGCTATTGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | AGATGCTTTTCCTCCATACCTGACAAATTAAGTCAGCAACCGCCTAAAAAGGCACTGAAGTCAATAGCATaGAGTCCAAGCAGCATGCCA | + |
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Preference number: 5 (lower is better) Translates to: RCFSSIPDKLSQQPPKKALKSIA*SPSSMP Trigger: TGGCATGCTGCTTGGACTCAATGCTATTGACTTCAG...TGCCTTTTTAGGCGGTTGCTGACTTAATTTGTCAGGTATGGAGGAAAAGCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR CAA 90 bp | TATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAATCCAAGGCAACAGCATaGACATCCAGAGCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: YAFPSEIYMGWTKISKQQSKATA*TSRAPG Trigger: CCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGGA...TTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | AGATGCTTTTCCTCCATACCTGACAAATTAAGTCAGCAACCGCCTAAAAAGGCATGCCAGCAAGCATATTaGCTTCTTCACCCAAGACAA | + |
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Preference number: 5 (lower is better) Translates to: RCFSSIPDKLSQQPPKKACQQAY*LLHPRQ Trigger: TTGTCTTGGGTGAAGAAGCAAATATGCTTGCTGGCA...TGCCTTTTTAGGCGGTTGCTGACTTAATTTGTCAGGTATGGAGGAAAAGCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR CAA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGTTAGGGACTTGTAACTaGCCACTGATGTCAGGGACC | + |
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Preference number: 5 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQLGTCN*PLMSGT Trigger: GGTCCCTGACATCAGTGGCAAGTTACAAGTCCCTAA...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | ATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCACTGAAGTCAATAGCATaGAGTCCAAGCAGCATGCCA | + |
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Preference number: 5 (lower is better) Translates to: IYMGWTKISKQQNVTHVPLKSIA*SPSSMP Trigger: TGGCATGCTGCTTGGACTCAATGCTATTGACTTCAG...TGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAGACAGATTCAGAAAGTaGGTTCTCACGAAGCCGCAA | + |
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Preference number: 5 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKDRFRK*VLTKPQ Trigger: TTGCGGCTTCGTGAGAACCAACTTTCTGAATCTGTC...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | GTGGTAATGGCTATGAAACACCCAGTATGTAAGTCATTGTTGCACACAGGGAAAGAGATGAATCATCAATaGTTTCAAAGCAAGACCGAT | + |
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Preference number: 5 (lower is better) Translates to: VVMAMKHPVCKSLLHTGKEMNHQ*FQSKTD Trigger: ATCGGTCTTGCTTTGAAACAATTGATGATTCATCTC...TTTCCCTGTGTGCAACAATGACTTACATACTGGGTGTTTCATAGCCATTACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047485.15 |
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| CDS-3UTR CAA 90 bp | TCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGACAGATTCAGAAAGTaGGTTCTCACGAAGCCGCAA | + |
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Preference number: 5 (lower is better) Translates to: SEIYMGWTKISKQQNVTHDRFRK*VLTKPQ Trigger: TTGCGGCTTCGTGAGAACCAACTTTCTGAATCTGTC...ATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGTGTTCTTTCTCCAATTaGTGGGCCAGATCAGAATCT | + |
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Preference number: 5 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQCSFSN*WARSES Trigger: AGATTCTGATCTGGCCCACAAATTGGAGAAAGAACA...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGAATATACGTTGGATTTTAGGCTaGTTAGGGACTTGTAACTTG | + |
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Preference number: 5 (lower is better) Translates to: WAGLKSPNNKMLRMYQNIRWILG*LGTCNL Trigger: CAAGTTACAAGTCCCTAACAAGCCTAAAATCCAACG...TATATTCTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | TTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACCAGGAGATGAATCATCAATaGTTTCAAAGCAAGACCGAT | + |
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Preference number: 5 (lower is better) Translates to: FTWAGLKSPNNKMLRMYQEMNHQ*FQSKTD Trigger: ATCGGTCTTGCTTTGAAACAATTGATGATTCATCTC...CTGGTACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | TCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATTGTTCTTTCTCCAATTaGTGGGCCAGATCAGAATCT | + |
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Preference number: 5 (lower is better) Translates to: SEIYMGWTKISKQQNVTHCSFSN*WARSES Trigger: AGATTCTGATCTGGCCCACAAATTGGAGAAAGAACA...ATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | GAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAAATGTTACGCATGTACGTTGGATTTTAGGCTaGTTAGGGACTTGTAACTTG | + |
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Preference number: 5 (lower is better) Translates to: EIYMGWTKISKQQNVTHVRWILG*LGTCNL Trigger: CAAGTTACAAGTCCCTAACAAGCCTAAAATCCAACG...TACATGCGTAACATTTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS-3UTR CAA 90 bp | ATGCTTTTCCCTCAGAAATTTACATGGGCTGGACTAAAATCTCCAAACAACAAATACAGTCAGCTGATCTaGAAGCTCCACAATGATATA | + |
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Preference number: 5 (lower is better) Translates to: MLFPQKFTWAGLKSPNNKYSQLI*KLHNDI Trigger: TATATCATTGTGGAGCTTCAAGATCAGCTGACTGTA...TTTGTTGTTTGGAGATTTTAGTCCAGCCCATGTAAATTTCTGAGGGAAAAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
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| CDS GCA 72 bp | ACAGCATTGACATCCAGAGCTCCTGGGGAGGGCCACTaGTTGGTGAGGTGGGCAGTTAACTCTTGTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: TALTSRAPGEGH*LVRWAVNSCLD Trigger: ATCAAGACAAGAGTTAACTGCCCACCTCACCAAGCAGTGGCCCTCCCCAGGAGCTCTGGATGTCAATGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
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| CDS CAA 90 bp | TGCTCCAGGGTAAGCTGGTATTTCTGCCTTACTCTCTTGCACTTGTaGAACCAGGTGTTCTCGTCTAGGATGAGAGGCGGTCCCACATTC | + |
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Preference number: 6 (lower is better) Translates to: CSRVSWYFCLTLLHL*NQVFSSRMRGGPTF Trigger: GAATGTGGGACCGCCTCTCATCCTAGACGAGAACACCTGGTTCAACAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTACCCTGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS CAA 90 bp | TTCTGCTCCAGGGTAAGCTGGTATTTCTGCCTTACTCTCTTGCACTaGTTGAACCAGGTGTTCTCGTCTAGGATGAGAGGCGGTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: FCSRVSWYFCLTLLH*LNQVFSSRMRGGPT Trigger: TGTGGGACCGCCTCTCATCCTAGACGAGAACACCTGGTTCAACAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTACCCTGGAGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS CCA 72 bp | TGGTTAGCTCCGTGGTGGGGCTTGCAAGGCAGTCGTTaGATTTTAGGCTTGTTAGGGACTTGTAACTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: WLAPWWGLQGSR*ILGLLGTCNLP Trigger: TGGCAAGTTACAAGTCCCTAACAAGCCTAAAATCCAACGACTGCCTTGCAAGCCCCACCACGGAGCTAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS TCA 72 bp | TCTCCTTCTTGTGAGTGGCTGGGATCCAATGAGGCCTaGGAAAGGCTAACTTCTGCTGATAACTGGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SPSCEWLGSNEA*ERLTSADNWSR Trigger: CCTTGACCAGTTATCAGCAGAAGTTAGCCTTTCTCAGGCCTCATTGGATCCCAGCCACTCACAAGAAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS CAA 90 bp | AAGGCAACAGCATTGACATCCAGAGCTCCTGGGGAGGGCCACTGCTaGGTGAGGTGGGCAGTTAACTCTTGTCTTGATCTTAAATCATTA | + |
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Preference number: 6 (lower is better) Translates to: KATALTSRAPGEGHC*VRWAVNSCLDLKSL Trigger: TAATGATTTAAGATCAAGACAAGAGTTAACTGCCCACCTCACCAAGCAGTGGCCCTCCCCAGGAGCTCTGGATGTCAATGCTGTTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115378.2 |
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| CDS CCA 72 bp | CCGGCAAGCCACTCTGATATAGTCCCAGAAGCTACGTaGGCTTTCATAGCCAAACCATGTTACTTGACCTTT | + |
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Preference number: 6 (lower is better) Translates to: PASHSDIVPEAT*AFIAKPCYLTF Trigger: AAAGGTCAAGTAACATGGTTTGGCTATGAAAGCCCACGTAGCTTCTGGGACTATATCAGAGTGGCTTGCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS CAA 72 bp | GTAAGCTGGTATTTCTGCCTTACTCTCTTGCACTTGTaGAACCAGGTGTTCTCGTCTAGGATGAGAGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: VSWYFCLTLLHL*NQVFSSRMRGG Trigger: ACCGCCTCTCATCCTAGACGAGAACACCTGGTTCAACAAGTGCAAGAGAGTAAGGCAGAAATACCAGCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS TCA 72 bp | AGATACAGTTTTGTGAAACTTTCCGGCAAGCCACTCTaGTATAGTCCCAGAAGCTACGTGGGCTTTCATAGC | + |
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Preference number: 6 (lower is better) Translates to: RYSFVKLSGKPL*YSPRSYVGFHS Trigger: GCTATGAAAGCCCACGTAGCTTCTGGGACTATATCAGAGTGGCTTGCCGGAAAGTTTCACAAAACTGTATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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| CDS GCA 72 bp | AGCATTGAGTCCAAGCAGCATGCCAGCAAGCATATTTaGTTCTTCACCCAAGACAATGGCTCCATCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SIESKQHASKHI*FFTQDNGSIFI Trigger: TATGAAGATGGAGCCATTGTCTTGGGTGAAGAAGCAAATATGCTTGCTGGCATGCTGCTTGGACTCAATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047485.15 ENSMUST00000115378.2 |
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