Pregenerated sensors for RUNDC3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006575Ensembl transcript IDs: ENSMUST00000006750.8, ENSMUST00000107102.8, ENSMUST00000107103.8, ENSMUST00000107105.9
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCTCCTTaGCAGGAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: VSLVAPPLPMQLLPP*QEAEAGKRLGSSFP Trigger: AGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTCCTGCCAAGGAGGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR TCA 90 bp | GGGTCATCTTTCCCTAGAGACCCGAGGCTAGGTTGGTGGTGTTCTTaGAGGGTGGCCTGGGTTGGGGGACTCATAAGGTGGCAGTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: GSSFPRDPRLGWWCS*RVAWVGGLIRWQLS Trigger: GGACAACTGCCACCTTATGAGTCCCCCAACCCAGGCCACCCTTCAAGAACACCACCAACCTAGCCTCGGGTCTCTAGGGAAAGATGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR CCA 90 bp | TGGAAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATaGAGCGCTGTCCCCAGGGGACTGAGGATCTGTAATCTGGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: WKKSEGTRQPSEPPE*SAVPRGLRICNLGV Trigger: GACACCCAGATTACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CCA 90 bp | AATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCTCCTTGGTTGTCCATGGCCCCTaGCAGGTGGGGCTGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: NLGVPRGPTTSHAAPASLVVHGP*QVGLVL Trigger: CAACACCAGCCCCACCTGCCAGGGGCCATGGACAAC...CAAGGAGGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCCAGCTCCTGCCTCCTTaGCAGGAAGCTGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RQPSEPPEWSAVPRGLRIQLLPP*QEAEAG Trigger: TCCTGCTTCAGCTTCCTGCCAAGGAGGCAGGAGCTG...GATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CCA 90 bp | GGACCACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTCTGGGTGTCCCTCGTaGCCCCACCACTTCCCATGC | + |
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Preference number: 2 (lower is better) Translates to: GPPAPEAGVEEIRRNQAASGCPS*PHHFPC Trigger: GCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGA...GGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATCTGTAATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGGTTGGTGGTGTTCTTaGAGGGTGGCCTGGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RICNLGVPRGPTTSHAAPGWWCS*RVAWVG Trigger: CCCAACCCAGGCCACCCTTCAAGAACACCACCAACC...AGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATTACAGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTGGACCACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGCCCCACCACTTCCCATaGAGCTCCTGCCTCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: RAGPPAPEAGVEEIRRNQPHHFP*SSCLLG Trigger: GCCAAGGAGGCAGGAGCTGCATGGGAAGTGGTGGGG...CTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTGGTCCAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGGGTGGCAGTTGTCCATaGCCCCTGGCAGGTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QEAEAGKRLGSSFPRDPRGGSCP*PLAGGA Trigger: AGCCCCACCTGCCAGGGGCCATGGACAACTGCCACC...CCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCTGTGGGGGACTCATAAGGTaGCAGTTGTCCATGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: QPSEPPEWSAVPRGLRICGGLIR*QLSMAP Trigger: AGGGGCCATGGACAACTGCCACCTTATGAGTCCCCC...ACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTCTGAAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCTGTGGTGTTCTTGAAGGGTaGCCTGGGTTGGGGGACTCA | + |
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Preference number: 2 (lower is better) Translates to: QPSEPPEWSAVPRGLRICGVLEG*PGLGDS Trigger: TGAGTCCCCCAACCCAGGCCACCCTTCAAGAACACC...ACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTCTGAAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTGGACCACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGTCCTTGGCAGGAAGCTaGAGCAGGAAAGAGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RAGPPAPEAGVEEIRRNQSLAGS*SRKEAW Trigger: CCAAGCCTCTTTCCTGCTTCAGCTTCCTGCCAAGGA...CTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTGGTCCAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGCTAAAGGGTGGCCTGGGTTaGGGGACTCATAAGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: EAEAGKRLGSSFPRDPRLKGGLG*GTHKVA Trigger: TGCCACCTTATGAGTCCCCCAACCCAGGCCACCCTT...TAGCCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGGAGCTCACAGTCTGGTaGGGAGACACACACAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: FIKHTVSICSISHSGDTEELTVW*GDTHSH Trigger: GTGACTGTGTGTGTCTCCCCACCAGACTGTGAGCTC...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| 3UTR-3UTR GCA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACATACATGTCCAAAGCCTaGCTCGTCTCAAAGTCGAGT | + |
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Preference number: 2 (lower is better) Translates to: PFIKHTVSICSISHSGDTYMSKA*LVSKSS Trigger: ACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTA...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| 3UTR-3UTR CAA 90 bp | AATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCTCCTTGAGGTTGGTGGTGTTCTaGAAGGGTGGCCTGGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: NLGVPRGPTTSHAAPASLRLVVF*KGGLGW Trigger: CCAACCCAGGCCACCCTTCAAGAACACCACCAACCT...CAAGGAGGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CAA 90 bp | GGACCACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCCTCATAAGGTGGCAGTaGTCCATGGCCCCTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GPPAPEAGVEEIRRNQAALIRWQ*SMAPGR Trigger: CCTGCCAGGGGCCATGGACAACTGCCACCTTATGAG...GGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR CCA 72 bp | TCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATaGAGCGCTGTCCCCAGGGGACTGAGGATCTGTAAT | + |
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Preference number: 3 (lower is better) Translates to: SEGTRQPSEPPE*SAVPRGLRICN Trigger: ATTACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR TCA 72 bp | TGCCTAATCTCTCCCCACATAGGTACCAAGGAAGGGTaGCTTCAGAGGGTACACAGGGTTAGACCAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: CLISPHIGTKEG*LQRVHRVRPEA Trigger: TGCCTCTGGTCTAACCCTGTGTACCCTCTGAAGTCACCCTTCCTTGGTACCTATGTGGGGAGAGATTAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGCACAAAATGCATGCGTaGAAGTCCTGGGCATTCGCT | + |
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Preference number: 3 (lower is better) Translates to: FIKHTVSICSISHSGDTEHKMHA*KSWAFA Trigger: AGCGAATGCCCAGGACTTCAACGCATGCATTTTGTG...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| 3UTR-3UTR CAA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACACACAAAATGCATGCGTaGAAGTCCTGGGCATTCGCT | + |
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Preference number: 3 (lower is better) Translates to: PFIKHTVSICSISHSGDTHKMHA*KSWAFA Trigger: AGCGAATGCCCAGGACTTCAACGCATGCATTTTGTG...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR GCA 90 bp | GGGACTCATAAGGTGGCAGTTGTCCATGGCCCCTGGCAGGTGGGGCTGGTGTTGGCTCAGGCTGGCCTCTaGAGACAGCGGCTCCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GTHKVAVVHGPWQVGLVLAQAGL*RQRLRA Trigger: AGCACGGAGCCGCTGTCTGCAGAGGCCAGCCTGAGC...CAACACCAGCCCCACCTGCCAGGGGCCATGGACAACTGCCACCTTATGAGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CCA 90 bp | GGGACTCATAAGGTGGCAGTTGTCCATGGCCCCTGGCAGGTGGGGCTGGTGTTGGCCTCTCCCAGGCGCTaGGAGTCTGAGCTCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GTHKVAVVHGPWQVGLVLASPRR*ESELRL Trigger: CAGCCTGAGCTCAGACTCCCAGCGCCTGGGAGAGGC...CAACACCAGCCCCACCTGCCAGGGGCCATGGACAACTGCCACCTTATGAGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCTGTCCAGCATGGAGGGCGTaGGGTCCTTCCCGATGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QPSEPPEWSAVPRGLRICPAWRA*GPSRWG Trigger: GCCCCATCGGGAAGGACCCCACGCCCTCCATGCTGG...ACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTCTGAAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR TCA 90 bp | GGGACTCATAAGGTGGCAGTTGTCCATGGCCCCTGGCAGGTGGGGCTGGTGTTGGCCCCGTTGTCCATCTaGGCTGAACCAGCTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GTHKVAVVHGPWQVGLVLAPLSI*AEPARW Trigger: CCAGCGAGCTGGTTCAGCTCAGATGGACAACGGGGC...CAACACCAGCCCCACCTGCCAGGGGCCATGGACAACTGCCACCTTATGAGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CCA 90 bp | AATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCTCCTTGAGTCTGAGCTCAGGCTaGCCTCTGCAGACAGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: NLGVPRGPTTSHAAPASLSLSSG*PLQTAA Trigger: AGCCGCTGTCTGCAGAGGCCAGCCTGAGCTCAGACT...CAAGGAGGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR TCA 90 bp | ATCTGTAATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCGTTGTCCATCTGAGCTaGACCAGCTCGCTGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ICNLGVPRGPTTSHAAPAVVHLS*TSSLAL Trigger: CAGGGCCAGCGAGCTGGTTCAGCTCAGATGGACAAC...GGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATTACAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR GCA 90 bp | AGGATCTGTAATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTTCCAAGTCCTTCAGCTaGGACTCGCGCAGCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: RICNLGVPRGPTTSHAAPSKSFS*DSRSRT Trigger: GGTGCGGCTGCGCGAGTCGCAGCTGAAGGACTTGGA...AGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATTACAGATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGACCACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCTGAACCAGCTCGCTaGCCCTGCTGGGGCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: RAGPPAPEAGVEEIRRNQAEPAR*PCWGTS Trigger: GCTTGTGCCCCAGCAGGGCCAGCGAGCTGGTTCAGC...CTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTGGTCCAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCGTTCCTCGTCCCTCTTaGCCTCTCCCAGGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PEAGVEEIRRNQAAFRATVPRPS*PLPGAG Trigger: CCCAGCGCCTGGGAGAGGCCAAGAGGGACGAGGAAC...GGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGGTTCCTCGTCCCTCTTaGCCTCTCCCAGGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGGPGIGEETRKGVTKEGVPRPS*PLPGAG Trigger: CCCAGCGCCTGGGAGAGGCCAAGAGGGACGAGGAAC...CCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CCA 90 bp | CCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTTCAGACGCAGAGGCCCAGCATaGAGGGCGTGGGGTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PAPEAGVEEIRRNQAAFRRRGPA*RAWGPS Trigger: GGAAGGACCCCACGCCCTCCATGCTGGGCCTCTGCG...TCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR TCA 90 bp | GAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCTGTAATCTGGGTCGATCAGCATCCCAGTaGGGACAGTGGCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: EPPEWSAVPRGLRICNLGRSASQ*GQWLPP Trigger: GGGAGGAAGCCACTGTCCTCACTGGGATGCTGATCG...ACCCAGATTACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR GCA 90 bp | GGGACTCATAAGGTGGCAGTTGTCCATGGCCCCTGGCAGGTGGGGCTGGTGTTGAGTTGTTGGGCACTTTaGTGCAGGCCAGCCGGATGT | + |
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Preference number: 4 (lower is better) Translates to: GTHKVAVVHGPWQVGLVLSCWAL*CRPAGC Trigger: ACATCCGGCTGGCCTGCAGCAAAGTGCCCAACAACT...CAACACCAGCCCCACCTGCCAGGGGCCATGGACAACTGCCACCTTATGAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR GCA 90 bp | GCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCCAAGTCCTTCAGCTaGGACTCGCGCAGCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: AGGPGIGEETRKGVTKEGSKSFS*DSRSRT Trigger: GGTGCGGCTGCGCGAGTCGCAGCTGAAGGACTTGGA...CCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR GCA 90 bp | GTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATGGAGCTCCTCCAGCTGCAGCTaGAGCCGCCGGTTCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: VWKKSEGTRQPSEPPEWSSSSCS*SRRFSA Trigger: GGCGGAGAACCGGCGGCTGCAGCTGCAGCTGGAGGA...GCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAGCCTCTCCCAGGCGCTaGGAGTCTGAGCTCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGPGIGEETRKGVTKEGSASPRR*ESELRL Trigger: CAGCCTGAGCTCAGACTCCCAGCGCCTGGGAGAGGC...TGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR TCA 90 bp | AGGATCTGTAATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTCTTCCTCCCGCAGCATaGTGGCTCCGGAGTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: RICNLGVPRGPTTSHAAPLPPAA*WLRSHR Trigger: TCTATGACTCCGGAGCCATCATGCTGCGGGAGGAAG...AGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATTACAGATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR GCA 90 bp | GCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGCTGCTCTCGGCACTGTaGCTCTCCTCCTCATCCGTC | + |
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Preference number: 4 (lower is better) Translates to: AGGPGIGEETRKGVTKEGLLSAL*LSSSSV Trigger: GACGGATGAGGAGGAGAGGCACAGTGCCGAGAGCAG...CCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CCA 90 bp | AGGATCTGTAATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGTGAGTTGTCCTCGCTaGTGCTGCTCTCGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: RICNLGVPRGPTTSHAAPVSCPR*CCSRHC Trigger: ACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCAC...AGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATTACAGATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR TCA 90 bp | CACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTTCAGTAGGGGTGCTCTGGTaGGTTGTCCTCGCTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: HLLLRQVWKKSEGTRQPSVGVLW*VVLAGA Trigger: AGCACCAGCGAGGACAACTCACCAGAGCACCCCTAC...TGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR TCA 90 bp | GGACCACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCGCGGCTCCGTGCTCATaGAGCTGTGTCTCCGATATA | + |
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Preference number: 4 (lower is better) Translates to: GPPAPEAGVEEIRRNQAAAAPCS*SCVSDI Trigger: TATATCGGAGACACAGCTTCATGAGCACGGAGCCGC...GGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGTCCTCCAGCTGCAGCTaGAGCCGCCGGTTCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KKAGGPGIGEETRKGVTKSSSCS*SRRFSA Trigger: GGCGGAGAACCGGCGGCTGCAGCTGCAGCTGGAGGA...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR GCA 90 bp | GAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCTGTAATCTGGGTATCAGACCTGTCAGCTaGTCCTGCAGCTCCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: EPPEWSAVPRGLRICNLGIRPVS*SCSSRI Trigger: GATCCTGGAGCTGCAGGAGCAGCTGACAGGTCTGAT...ACCCAGATTACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR GCA 90 bp | ATCTGTAATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCGATATAGCTTGGAGTTaGTGGCACCCTCGGGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: ICNLGVPRGPTTSHAAPADIAWS*WHPRAY Trigger: ATAGGCCCGAGGGTGCCAGCAACTCCAAGCTATATC...GGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATTACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAAGTTCCTCGTCCCTCTTaGCCTCTCCCAGGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGIGEETRKGVTKEGSTQVPRPS*PLPGAG Trigger: CCCAGCGCCTGGGAGAGGCCAAGAGGGACGAGGAAC...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCACTTCCTCCCGCAGCATaGTGGCTCCGGAGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGPGIGEETRKGVTKEGSLPPAA*WLRSHR Trigger: TCTATGACTCCGGAGCCATCATGCTGCGGGAGGAAG...TGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | CACTTCCCATGCAGCTCCTGCCTCCTTGGCAGGAAGCTGAAGCAGGAAAGAGGCGGCATTCGTTGGATTTaGAGCTTGCCAGGGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HFPCSSCLLGRKLKQERGGIRWI*SLPGTC Trigger: GCAAGTCCCTGGCAAGCTTCAAATCCAACGAATGCC...GCCTCTTTCCTGCTTCAGCTTCCTGCCAAGGAGGCAGGAGCTGCATGGGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGCTACTGCTCTCGGCACTGTaGCTCTCCTCCTCATCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGKRLGSSFPRDPRLLLSAL*LSSSSV Trigger: GACGGATGAGGAGGAGAGGCACAGTGCCGAGAGCAG...TAGCCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATGGAGCGCTGTAGTTGTCCTCGCTGGTaGTGCTCTCGGCACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEIRRNQAAFRATRMERCSCPRW*CSRHCA Trigger: GGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACT...ACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | CACACACAGTCACAAACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTGCTCAGGCTGGCCTCTaGAGACAGCGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTQSQTQCGELHVQSLPRAQAGL*RQRLRA Trigger: AGCACGGAGCCGCTGTCTGCAGAGGCCAGCCTGAGC...ACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGTTTGTGACTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | CACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTTCAGCCCCAGAGCCATGGTaGTCTGGACAAAGCTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLLRQVWKKSEGTRQPSAPEPW*SGQSSL Trigger: AAGCGAGCTTTGTCCAGACCACCATGGCTCTGGGGC...TGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGCTAGCAGCCCCAGAGCCATaGTGGTCTGGACAAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGKRLGSSFPRDPRLAAPEP*WSGQSS Trigger: CGAGCTTTGTCCAGACCACCATGGCTCTGGGGCTGC...TAGCCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCTGTAATCTGGGTATAGCTTGGAGTTGCTaGCACCCTCGGGCCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPPEWSAVPRGLRICNLGIAWSC*HPRAYE Trigger: TTCATAGGCCCGAGGGTGCCAGCAACTCCAAGCTAT...ACCCAGATTACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGAGGGTGTGTAATCGATaGCCACCGGTGTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGGPGIGEETRKGVTKEGRVCNR*PPVSSH Trigger: ATGGGAAGACACCGGTGGTCATCGATTACACACCCT...CCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAAGTAGGGGTGCTCTGGTaGGTTGTCCTCGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGIGEETRKGVTKEGSTQVGVLW*VVLAGA Trigger: AGCACCAGCGAGGACAACTCACCAGAGCACCCCTAC...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCCACGTTGCGGGAAGATaGTTTCTTGGAGGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKSEGTRQPSEPPEWSAVHVAGR*FLGGQP Trigger: GGGCTGCCCTCCAAGAAAGCATCTTCCCGCAACGTG...GACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCTGTAATCTGGGTCGGTGGCTGAGGATCTaGTCTAAAATGGCTGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPPEWSAVPRGLRICNLGRWLRI*SKMAAK Trigger: TTTCGCAGCCATTTTAGAGCAGATCCTCAGCCACCG...ACCCAGATTACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | CACCTGCTCCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTTCATGTTGGGCACTTTGCTaGAGGCCAGCCGGATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLLRQVWKKSEGTRQPSCWALC*RPAGCS Trigger: ACTACATCCGGCTGGCCTGCAGCAAAGTGCCCAACA...TGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGGAGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAAAGTTGTCCTCGCTGGTaGTGCTCTCGGCACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGIGEETRKGVTKEGSTQSCPRW*CSRHCA Trigger: GGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACT...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGTCCAAGTCCTTCAGCTaGGACTCGCGCAGCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KKAGGPGIGEETRKGVTKSKSFS*DSRSRT Trigger: GGTGCGGCTGCGCGAGTCGCAGCTGAAGGACTTGGA...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | AGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATGGACCTGTCAGCTGCTCCTaGAGCTCCAGGATCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCGRNQKEPGSLQSHQNGPVSCS*SSRITP Trigger: AGGCGTGATCCTGGAGCTGCAGGAGCAGCTGACAGG...TCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR TCA 90 bp | CACACACAGTCACAAACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTGTTGTCCATCTGAGCTaGACCAGCTCGCTGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTQSQTQCGELHVQSLPRVVHLS*TSSLAL Trigger: CAGGGCCAGCGAGCTGGTTCAGCTCAGATGGACAAC...ACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGTTTGTGACTGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | GCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGCTAGGTAGGGTGTGTAATCGATaGCCACCGGTGTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEAGKRLGSSFPRDPRLGRVCNR*PPVSSH Trigger: ATGGGAAGACACCGGTGGTCATCGATTACACACCCT...ACCTAGCCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | CACACACAGTCACAAACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTAGTTGTCCTCGCTGGTaGTGCTCTCGGCACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTQSQTQCGELHVQSLPRSCPRW*CSRHCA Trigger: GGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACT...ACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGTTTGTGACTGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | GGGACTCATAAGGTGGCAGTTGTCCATGGCCCCTGGCAGGTGGGGCTGGTGTTGTCTGTGCGTAGACAATaGGAAACTTCTGTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GTHKVAVVHGPWQVGLVLSVRRQ*ETSVPS Trigger: AGATGGAACAGAAGTTTCGCATTGTCTACGCACAGA...CAACACCAGCCCCACCTGCCAGGGGCCATGGACAACTGCCACCTTATGAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGGTTGGATTTGAAGCTTaGCAGGGACTTGCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QEAEAGKRLGSSFPRDPRVGFEA*QGLAAG Trigger: CCCAGCTGCAAGTCCCTGGCAAGCTTCAAATCCAAC...CCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGGCTGAACCAGCTCGCTaGCCCTGCTGGGGCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLAEPAR*PCWGTS Trigger: GCTTGTGCCCCAGCAGGGCCAGCGAGCTGGTTCAGC...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCATGCTCACACAGTTGTTaGGCACTTTGCTGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGPGIGEETRKGVTKEGSCSHSC*ALCCRP Trigger: TGGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCA...TGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGGCCTCTCCCAGGCGCTaGGAGTCTGAGCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLASPRR*ESELRL Trigger: CAGCCTGAGCTCAGACTCCCAGCGCCTGGGAGAGGC...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGCTTCCTCCCGCAGCATaGTGGCTCCGGAGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKAGGPGIGEETRKGVTKLPPAA*WLRSHR Trigger: TCTATGACTCCGGAGCCATCATGCTGCGGGAGGAAG...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTACGATCAGCATCCCAGTaGGGACAGTGGCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQCGELHVQSLPRLKVELRSASQ*GQWLPP Trigger: GGGAGGAAGCCACTGTCCTCACTGGGATGCTGATCG...TAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTAGTAGGGGTGCTCTGGTaGGTTGTCCTCGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQCGELHVQSLPRLKVELVGVLW*VVLAGA Trigger: AGCACCAGCGAGGACAACTCACCAGAGCACCCCTAC...TAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGTCCAAGTCCTTCAGCTaGGACTCGCGCAGCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLSKSFS*DSRSRT Trigger: GGTGCGGCTGCGCGAGTCGCAGCTGAAGGACTTGGA...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAAATCAGACCTGTCAGCTaGTCCTGCAGCTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PGIGEETRKGVTKEGSTQIRPVS*SCSSRI Trigger: GATCCTGGAGCTGCAGGAGCAGCTGACAGGTCTGAT...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCTGTAATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTCGGAAGAGTCATCAATaGGTTCTGCTGTGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RICNLGVPRGPTTSHAAPRKSHQ*VLLCTS Trigger: AGAAGTACACAGCAGAACCCATTGATGACTCTTCCG...AGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATTACAGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATGGAGCGCTGTTGCTCACACAGTTGTTaGGCACTTTGCTGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEIRRNQAAFRATRMERCCSHSC*ALCCRP Trigger: TGGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCA...ACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR CCA 90 bp | CACACACAGTCACAAACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTGTGAGTTGTCCTCGCTaGTGCTGCTCTCGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTQSQTQCGELHVQSLPRVSCPR*CCSRHC Trigger: ACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCAC...ACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGTTTGTGACTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGGGATCAGACCTGTCCTaGGAGGGGGAGGGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLGSDLS*EGEGDQ Trigger: CTGATCCCCCTCCCCCTCCCAGGACAGGTCTGATCC...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGCGGCTCCGTGCTCATaGAGCTGTGTCTCCGATATA | + |
|
Preference number: 4 (lower is better) Translates to: KKAGGPGIGEETRKGVTKAAPCS*SCVSDI Trigger: TATATCGGAGACACAGCTTCATGAGCACGGAGCCGC...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | ACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTACACGTTGCGGGAAGATaGTTTCTTGGAGGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQCGELHVQSLPRLKVELHVAGR*FLGGQP Trigger: GGGCTGCCCTCCAAGAAAGCATCTTCCCGCAACGTG...TAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CACACACAGTCACAAACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTTGTTGGGCACTTTGCTaGAGGCCAGCCGGATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTQSQTQCGELHVQSLPRCWALC*RPAGCS Trigger: ACTACATCCGGCTGGCCTGCAGCAAAGTGCCCAACA...ACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGTTTGTGACTGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGTGTTGGGCACTTTGCTaGAGGCCAGCCGGATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKAGGPGIGEETRKGVTKCWALC*RPAGCS Trigger: ACTACATCCGGCTGGCCTGCAGCAAAGTGCCCAACA...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGAGTTGTTGGGCACTTTaGTGCAGGCCAGCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KKAGGPGIGEETRKGVTKSCWAL*CRPAGC Trigger: ACATCCGGCTGGCCTGCAGCAAAGTGCCCAACAACT...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGCCATGTTCTCAATGCTaGTCACACAGTTGTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QEAEAGKRLGSSFPRDPRPCSQC*SHSCWA Trigger: TGCCCAACAACTGTGTGAGCAGCATTGAGAACATGG...CCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGAGTTGTCCTCGCTGGTaGTGCTCTCGGCACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLSCPRW*CSRHCA Trigger: GGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACT...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGTCCTCCAGCTGCAGCTaGAGCCGCCGGTTCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIKHTVSICSISHSGDTESSSCS*SRRFSA Trigger: GGCGGAGAACCGGCGGCTGCAGCTGCAGCTGGAGGA...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CACACACAGTCACAAACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTATCAGACCTGTCAGCTaGTCCTGCAGCTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HTQSQTQCGELHVQSLPRIRPVS*SCSSRI Trigger: GATCCTGGAGCTGCAGGAGCAGCTGACAGGTCTGAT...ACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGTTTGTGACTGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAAGATATAGCTTGGAGTTaGTGGCACCCTCGGGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PGIGEETRKGVTKEGSTQDIAWS*WHPRAY Trigger: ATAGGCCCGAGGGTGCCAGCAACTCCAAGCTATATC...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGGGGGATCAGGCAGCTaGTCCTGCAGCTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HTVSICSISHSGDTENGQGGSGS*SCSSRI Trigger: GATCCTGGAGCTGCAGGAGCAGCTGCCTGATCCCCC...TTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAAATAGCTTGGAGTTGCTaGCACCCTCGGGCCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGIGEETRKGVTKEGSTQIAWSC*HPRAYE Trigger: TTCATAGGCCCGAGGGTGCCAGCAACTCCAAGCTAT...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGAGTCTGAGCTCAGGCTaGCCTCTGCAGACAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLSLSSG*PLQTAA Trigger: AGCCGCTGTCTGCAGAGGCCAGCCTGAGCTCAGACT...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGTTCCTCGTCCCTCTTaGCCTCTCCCAGGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEHLLYFTLWGYREWTRHVPRPS*PLPGAG Trigger: CCCAGCGCCTGGGAGAGGCCAAGAGGGACGAGGAAC...ATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGGTTGTCCATCTGAGCTaGACCAGCTCGCTGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLVVHLS*TSSLAL Trigger: AAGGGCCAGCGAGCTGGTTCAGCTCAGATGGACAAC...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107103.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCTGTGCGTAGACAATaGGAAACTTCTGTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGGPGIGEETRKGVTKEGSVRRQ*ETSVPS Trigger: AGATGGAACAGAAGTTTCGCATTGTCTACGCACAGA...CCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | TACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAATTCCTCCAGCTGCAGCTaGAGCCGCCGGTTCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YMSKACLVSKSSYPIQYNSSSCS*SRRFSA Trigger: GGCGGAGAACCGGCGGCTGCAGCTGCAGCTGGAGGA...ATTATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGGCTCAGGCTGGCCTCTaGAGACAGCGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIKHTVSICSISHSGDTEAQAGL*RQRLRA Trigger: AGCACGGAGCCGCTGTCTGCAGAGGCCAGCCTGAGC...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGCTCAGGCTGGCCTCTaGAGACAGCGGCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFIKHTVSICSISHSGDTAQAGL*RQRLRA Trigger: AGCACGGAGCCGCTGTCTGCAGAGGCCAGCCTGAGC...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCACGGAAGAGTCATCAATaGGTTCTGCTGTGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGPGIGEETRKGVTKEGSRKSHQ*VLLCTS Trigger: AGAAGTACACAGCAGAACCCATTGATGACTCTTCCG...TGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGCTGAACCAGCTCGCTaGCCCTGCTGGGGCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFIKHTVSICSISHSGDTAEPAR*PCWGTS Trigger: GCTTGTGCCCCAGCAGGGCCAGCGAGCTGGTTCAGC...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | CACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAAGTCTGAGCTCAGGCTaGCCTCTGCAGACAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTVSICSISHSGDTENGQSLSSG*PLQTAA Trigger: AGCCGCTGTCTGCAGAGGCCAGCCTGAGCTCAGACT...TTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | AGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATGCCTCTCCCAGGCGCTaGGAGTCTGAGCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYMSKACLVSKSSYPIQYASPRR*ESELRL Trigger: CAGCCTGAGCTCAGACTCCCAGCGCCTGGGAGAGGC...ATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCAGTCGTAGCTTTGGGTaGATTTTAGGTAGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKSEGTRQPSEPPEWSAVSRSFG*ILGRVC Trigger: ACACACCCTACCTAAAATTCACCCAAAGCTACGACT...GACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAACACGTTGCGGGAAGATaGTTTCTTGGAGGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTVSICSISHSGDTENGQHVAGR*FLGGQP Trigger: GGGCTGCCCTCCAAGAAAGCATCTTCCCGCAACGTG...TTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGTGTTGGGCACTTTGCTaGAGGCCAGCCGGATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLCWALC*RPAGCS Trigger: ACTACATCCGGCTGGCCTGCAGCAAAGTGCCCAACA...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | ACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTAGATATAGCTTGGAGTTaGTGGCACCCTCGGGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TQCGELHVQSLPRLKVELDIAWS*WHPRAY Trigger: ATAGGCCCGAGGGTGCCAGCAACTCCAAGCTATATC...TAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | CACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGCCCCAGAGCCATGGTaGTCTGGACAAAGCTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTVSICSISHSGDTENGQAPEPW*SGQSSL Trigger: AAGCGAGCTTTGTCCAGACCACCATGGCTCTGGGGC...TTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | AGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATGTTGTCCATCTGAGCTaGACCAGCTCGCTGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYMSKACLVSKSSYPIQYVVHLS*TSSLAL Trigger: CAGGGCCAGCGAGCTGGTTCAGCTCAGATGGACAAC...ATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | TACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAATGCCCCGTTGTCCATCTaGGCTGAACCAGCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YMSKACLVSKSSYPIQYNAPLSI*AEPARW Trigger: CCAGCGAGCTGGTTCAGCTCAGATGGACAACGGGGC...ATTATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATCTTCCTCCCGCAGCATaGTGGCTCCGGAGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEHLLYFTLWGYREWTRHLPPAA*WLRSHR Trigger: TCTATGACTCCGGAGCCATCATGCTGCGGGAGGAAG...ATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | ATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATCGATCAGCATCCCAGTaGGGACAGTGGCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKHTVSICSISHSGDTENRSASQ*GQWLPP Trigger: GGGAGGAAGCCACTGTCCTCACTGGGATGCTGATCG...ATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACACGATCAGCATCCCAGTaGGGACAGTGGCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFIKHTVSICSISHSGDTRSASQ*GQWLPP Trigger: GGGAGGAAGCCACTGTCCTCACTGGGATGCTGATCG...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATCACGTTGCGGGAAGATaGTTTCTTGGAGGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SEHLLYFTLWGYREWTRHHVAGR*FLGGQP Trigger: GGGCTGCCCTCCAAGAAAGCATCTTCCCGCAACGTG...ATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAAGTTGTTGGGCACTTTaGTGCAGGCCAGCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HTVSICSISHSGDTENGQSCWAL*CRPAGC Trigger: ACATCCGGCTGGCCTGCAGCAAAGTGCCCAACAACT...TTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGCTGCTCTCGGCACTGTaGCTCTCCTCCTCATCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FIKHTVSICSISHSGDTELLSAL*LSSSSV Trigger: GACGGATGAGGAGGAGAGGCACAGTGCCGAGAGCAG...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATCTGCTCTCGGCACTGTaGCTCTCCTCCTCATCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IKHTVSICSISHSGDTENLLSAL*LSSSSV Trigger: GACGGATGAGGAGGAGAGGCACAGTGCCGAGAGCAG...ATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | AGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATCCTGTCAGCTGCTCCTaGAGCTCCAGGATCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SYMSKACLVSKSSYPIQYPVSCS*SSRITP Trigger: AGGCGTGATCCTGGAGCTGCAGGAGCAGCTGACAGG...ATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 |
||
| CDS-3UTR GCA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACACCTGTCAGCTGCTCCTaGAGCTCCAGGATCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFIKHTVSICSISHSGDTPVSCS*SSRITP Trigger: AGGCGTGATCCTGGAGCTGCAGGAGCAGCTGACAGG...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCCAAGCTTTAAATCGGTaGCTGAGGATCTGCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKSEGTRQPSEPPEWSAVQALNR*LRICSK Trigger: TTTAGAGCAGATCCTCAGCCACCGATTTAAAGCTTG...GACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGTGCTCACACAGTTGTTaGGCACTTTGCTGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FALFHTLGIQRMDKTWSLCSHSC*ALCCRP Trigger: TGGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCA...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | AGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAGTCTGAGCTCAGGCTaGCCTCTGCAGACAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYMSKACLVSKSSYPIQYSLSSG*PLQTAA Trigger: AGCCGCTGTCTGCAGAGGCCAGCCTGAGCTCAGACT...ATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | CACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAAGGGTGTGTAATCGATaGCCACCGGTGTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HTVSICSISHSGDTENGQRVCNR*PPVSSH Trigger: ATGGGAAGACACCGGTGGTCATCGATTACACACCCT...TTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGAGTCGTAGCTTTGGGTaGATTTTAGGTAGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKAGGPGIGEETRKGVTKSRSFG*ILGRVC Trigger: ACACACCCTACCTAAAATTCACCCAAAGCTACGACT...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | TACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAATGTAGGGGTGCTCTGGTaGGTTGTCCTCGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YMSKACLVSKSSYPIQYNVGVLW*VVLAGA Trigger: AGCACCAGCGAGGACAACTCACCAGAGCACCCCTAC...ATTATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAATCTGTGCGTAGACAATaGGAAACTTCTGTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGIGEETRKGVTKEGSTQSVRRQ*ETSVPS Trigger: AGATGGAACAGAAGTTTCGCATTGTCTACGCACAGA...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGGCCCCAGAGCCATGGTaGTCTGGACAAAGCTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIKHTVSICSISHSGDTEAPEPW*SGQSSL Trigger: AAGCGAGCTTTGTCCAGACCACCATGGCTCTGGGGC...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGCCCCAGAGCCATGGTaGTCTGGACAAAGCTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFIKHTVSICSISHSGDTAPEPW*SGQSSL Trigger: AAGCGAGCTTTGTCCAGACCACCATGGCTCTGGGGC...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAACAAGCTTTAAATCGGTaGCTGAGGATCTGCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGIGEETRKGVTKEGSTQQALNR*LRICSK Trigger: TTTAGAGCAGATCCTCAGCCACCGATTTAAAGCTTG...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGTGAGTTGTCCTCGCTaGTGCTGCTCTCGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFIKHTVSICSISHSGDTVSCPR*CCSRHC Trigger: ACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCAC...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGGTGAGTTGTCCTCGCTaGTGCTGCTCTCGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FIKHTVSICSISHSGDTEVSCPR*CCSRHC Trigger: ACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCAC...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | ATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTATAGCTTGGAGTTGCTaGCACCCTCGGGCCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ICSISHSGDTENGQDMVPIAWSC*HPRAYE Trigger: TTCATAGGCCCGAGGGTGCCAGCAACTCCAAGCTAT...AGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTAGGCCCTTTAAATCGGTaGCTGAGGATCTGCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQCGELHVQSLPRLKVELGPLNR*LRICSK Trigger: TTTAGAGCAGATCCTCAGCCACCGATTTAAAGGGCC...TAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107103.8 |
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| CDS-3UTR TCA 90 bp | AGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATGCGGCTCCGTGCTCATaGAGCTGTGTCTCCGATATA | + |
|
Preference number: 4 (lower is better) Translates to: SYMSKACLVSKSSYPIQYAAPCS*SCVSDI Trigger: TATATCGGAGACACAGCTTCATGAGCACGGAGCCGC...ATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR GCA 90 bp | AGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAGTTGTTGGGCACTTTaGTGCAGGCCAGCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SYMSKACLVSKSSYPIQYSCWAL*CRPAGC Trigger: ACATCCGGCTGGCCTGCAGCAAAGTGCCCAACAACT...ATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CCA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGCAAGCTTTAAATCGGTaGCTGAGGATCTGCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKAGGPGIGEETRKGVTKQALNR*LRICSK Trigger: TTTAGAGCAGATCCTCAGCCACCGATTTAAAGCTTG...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107102.8 ENSMUST00000107105.9 |
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| CDS-3UTR TCA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAAGGGTGTGTAATCGATaGCCACCGGTGTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFIKHTVSICSISHSGDTRVCNR*PPVSSH Trigger: ATGGGAAGACACCGGTGGTCATCGATTACACACCCT...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | CACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAACCATGTTCTCAATGCTaGTCACACAGTTGTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTVSICSISHSGDTENGQPCSQC*SHSCWA Trigger: TGCCCAACAACTGTGTGAGCAGCATTGAGAACATGG...TTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGTGCTCACACAGTTGTTaGGCACTTTGCTGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIKHTVSICSISHSGDTECSHSC*ALCCRP Trigger: TGGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCA...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATCCATGTTCTCAATGCTaGTCACACAGTTGTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEHLLYFTLWGYREWTRHPCSQC*SHSCWA Trigger: TGCCCAACAACTGTGTGAGCAGCATTGAGAACATGG...ATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CCA 90 bp | TACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAATATAGCTTGGAGTTGCTaGCACCCTCGGGCCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YMSKACLVSKSSYPIQYNIAWSC*HPRAYE Trigger: TTCATAGGCCCGAGGGTGCCAGCAACTCCAAGCTAT...ATTATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATAGTCGTAGCTTTGGGTaGATTTTAGGTAGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEHLLYFTLWGYREWTRHSRSFG*ILGRVC Trigger: ACACACCCTACCTAAAATTCACCCAAAGCTACGACT...ATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR GCA 90 bp | AGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATCCATGTTCTCAATGCTaGTCACACAGTTGTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYMSKACLVSKSSYPIQYPCSQC*SHSCWA Trigger: TGCCCAACAACTGTGTGAGCAGCATTGAGAACATGG...ATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATCGGAAGAGTCATCAATaGGTTCTGCTGTGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEHLLYFTLWGYREWTRHRKSHQ*VLLCTS Trigger: AGAAGTACACAGCAGAACCCATTGATGACTCTTCCG...ATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CCA 90 bp | TTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGCGGAAGAGTCATCAATaGGTTCTGCTGTGTACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIKHTVSICSISHSGDTERKSHQ*VLLCTS Trigger: AGAAGTACACAGCAGAACCCATTGATGACTCTTCCG...CTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR TCA 90 bp | TACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAATAGTCGTAGCTTTGGGTaGATTTTAGGTAGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YMSKACLVSKSSYPIQYNSRSFG*ILGRVC Trigger: ACACACCCTACCTAAAATTCACCCAAAGCTACGACT...ATTATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS GCA 90 bp | AGCTGCAGCTGCAGCCGCCGGTTCTCCGCCTCCAAGTCCTTCAGCTaGGACTCGCGCAGCCGCACCAGCTCCTCCAGGTATCCCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SCSCSRRFSASKSFS*DSRSRTSSSRYPFC Trigger: ACAGAAGGGATACCTGGAGGAGCTGGTGCGGCTGCGCGAGTCGCAGCTGAAGGACTTGGAGGCGGAGAACCGGCGGCTGCAGCTGCAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | AGGCAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCGATGTGGTGAGCTCCTaGGAACCCTGGGCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RQPSEPPEWSAVPRGLRIDVVSS*EPWARG Trigger: CCCCCTGGCCCAGGGTTCCAAGGAGCTCACCACATC...GATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CAA 90 bp | AATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCTCCTTGCGGGAAGATGCTTTCTaGGAGGGCAGCCCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NLGVPRGPTTSHAAPASLREDAF*EGSPRA Trigger: GGCTCTGGGGCTGCCCTCCAAGAAAGCATCTTCCCG...CAAGGAGGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CAA 90 bp | CACTTCCCATGCAGCTCCTGCCTCCTTGGCAGGAAGCTGAAGCAGGAAAGAGGCGGTTCCTCGTCCCTCTaGGCCTCTCCCAGGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFPCSSCLLGRKLKQERGGSSSL*ASPRRW Trigger: CCAGCGCCTGGGAGAGGCCAAGAGGGACGAGGAACC...GCCTCTTTCCTGCTTCAGCTTCCTGCCAAGGAGGCAGGAGCTGCATGGGAAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS GCA 90 bp | CGAGAGGCAGGTAGGGGTGCTCTGGTGAGTTGTCCTCGCTGGTGCTaGTCTCGGCACTGTGCCTCTCCTCCTCATCCGTCAGGTAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: REAGRGALVSCPRWC*SRHCASPPHPSGSR Trigger: ACGACTACCTGACGGATGAGGAGGAGAGGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCACCAGAGCACCCCTACCTGCCTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS TCA 90 bp | CCAACTGTCTTCATCGGTGACGAGAGGCAGGTAGGGGTGCTCTGGTaGGTTGTCCTCGCTGGTGCTGCTCTCGGCACTGTGCCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PTVFIGDERQVGVLW*VVLAGAALGTVPLL Trigger: GAGGAGAGGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCACCAGAGCACCCCTACCTGCCTCTCGTCACCGATGAAGACAGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | AATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCTCCTTGCTGCTCACACAGTTGTaGGGCACTTTGCTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NLGVPRGPTTSHAAPASLLLTQL*GTLLQA Trigger: GGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCAG...CAAGGAGGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS TCA 90 bp | GCTGCAGGCCAGCCGGATGTAGTCCCAGAAGCCCCGTTGTCCATCTaGGCTGAACCAGCTCGCTGGCCCTTTAAATCGGTGGCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AAGQPDVVPEAPLSI*AEPARWPFKSVAED Trigger: ATCCTCAGCCACCGATTTAAAGGGCCAGCGAGCTGGTTCAGCTCAGATGGACAACGGGGCTTCTGGGACTACATCCGGCTGGCCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107103.8 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGCGGGAAGATGCTTTCTaGGAGGGCAGCCCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGGPGIGEETRKGVTKEGREDAF*EGSPRA Trigger: GGCTCTGGGGCTGCCCTCCAAGAAAGCATCTTCCCG...CCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | CACTTCCCATGCAGCTCCTGCCTCCTTGGCAGGAAGCTGAAGCAGGAAAGAGGCCAGTTGTTGGGCACTTaGCTGCAGGCCAGCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HFPCSSCLLGRKLKQERGQLLGT*LQASRM Trigger: CATCCGGCTGGCCTGCAGCAAAGTGCCCAACAACTG...GCCTCTTTCCTGCTTCAGCTTCCTGCCAAGGAGGCAGGAGCTGCATGGGAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS CCA 90 bp | TCAGGTTCCTGCGCTCCACGATCACGTTGCGGGAAGATGCTTTCTTaGAGGGCAGCCCCAGAGCCATGGTGGTCTGGACAAAGCTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGSCAPRSRCGKMLS*RAAPEPWWSGQSSL Trigger: AAGCGAGCTTTGTCCAGACCACCATGGCTCTGGGGCTGCCCTCCAAGAAAGCATCTTCCCGCAACGTGATCGTGGAGCGCAGGAACCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | CCTGAGGCAGGTGTGGAAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCCTTCTCACGCTGATTTaGTGCCGCGGCCTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PEAGVEEIRRNQAAFRATLLTLI*CRGLLQ Trigger: CTGGAGGAGGCCGCGGCACAAAATCAGCGTGAGAAG...GGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTCCACACCTGCCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGCTTCTCACGCTGATTTaGTGCCGCGGCCTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGGPGIGEETRKGVTKEGLLTLI*CRGLLQ Trigger: CTGGAGGAGGCCGCGGCACAAAATCAGCGTGAGAAG...CCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | GCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGCTAGGTAAGCTTGCCAGGGACTaGCAGCTGGGGATGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEAGKRLGSSFPRDPRLGKLARD*QLGMEA Trigger: GGCCTCCATCCCCAGCTGCAAGTCCCTGGCAAGCTT...ACCTAGCCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CAA 90 bp | GGGACTCATAAGGTGGCAGTTGTCCATGGCCCCTGGCAGGTGGGGCTGGTGTTGCTCACCAGGCATTCGTaGGATTTGAAGCTTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTHKVAVVHGPWQVGLVLLTRHS*DLKLAR Trigger: CCTGGCAAGCTTCAAATCCAACGAATGCCTGGTGAG...CAACACCAGCCCCACCTGCCAGGGGCCATGGACAACTGCCACCTTATGAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS TCA 90 bp | CTGTGTCTCCGATATAGCTTGGAGTTGCTGGCACCCTCGGGCCTATaGAGTGTGCTCAGGGAGGGCCACTGGTTGACTAGGGATGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLRYSLELLAPSGL*SVLREGHWLTRDVV Trigger: CACCACATCCCTAGTCAACCAGTGGCCCTCCCTGAGCACACTTCATAGGCCCGAGGGTGCCAGCAACTCCAAGCTATATCGGAGACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | GGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCACAGTTGTTGGGCACTTaGCTGCAGGCCAGCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GGPGIGEETRKGVTKEGSQLLGT*LQASRM Trigger: CATCCGGCTGGCCTGCAGCAAAGTGCCCAACAACTG...TGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGCTGCTCACACAGTTGTaGGGCACTTTGCTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGGPGIGEETRKGVTKEGLLTQL*GTLLQA Trigger: GGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCAG...CCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | ATCTGTAATCTGGGTGTCCCTCGTGGCCCCACCACTTCCCATGCAGCTCCTGCCATGCTGCTCACACAGTaGTTGGGCACTTTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ICNLGVPRGPTTSHAAPAMLLTQ*LGTLLQ Trigger: CTGCAGCAAAGTGCCCAACAACTGTGTGAGCAGCAT...GGCAGGAGCTGCATGGGAAGTGGTGGGGCCACGAGGGACACCCAGATTACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CAA 90 bp | CCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCAACACAAGATGTGGTGAGCTCCTaGGAACCCTGGGCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGIGEETRKGVTKEGSTQDVVSS*EPWARG Trigger: CCCCCTGGCCCAGGGTTCCAAGGAGCTCACCACATC...TTGTGTTGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGTGTCTCCGATATAGCTaGGAGTTGCTGGCACCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QEAEAGKRLGSSFPRDPRCLRYS*ELLAPS Trigger: CGAGGGTGCCAGCAACTCCAAGCTATATCGGAGACA...CCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGGAGGGGTCATGTCTCCGATATAGCTaGGAGTTGCTGGCACCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGPGIGEETRKGVTKEGSCLRYS*ELLAPS Trigger: CGAGGGTGCCAGCAACTCCAAGCTATATCGGAGACA...TGACCCCTCCTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS TCA 90 bp | TCTGTTCCATCTTGTGCCACTTGTTGTACCAACTGTCTTCATCGGTaGCGAGAGGCAGGTAGGGGTGCTCTGGTGAGTTGTCCTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVPSCATCCTNCLHR*REAGRGALVSCPRW Trigger: CCAGCGAGGACAACTCACCAGAGCACCCCTACCTGCCTCTCGTCACCGATGAAGACAGTTGGTACAACAAGTGGCACAAGATGGAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTCAGAGCCACCAGAATGGAGCGCTGTCCCCAGGGGACTGAGGATCTGTATCTTGTGCCACTTGTaGTACCAACTGTCTTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: QPSEPPEWSAVPRGLRICILCHL*YQLSSS Trigger: CGATGAAGACAGTTGGTACAACAAGTGGCACAAGAT...ACAGATCCTCAGTCCCCTGGGGACAGCGCTCCATTCTGGTGGCTCTGAAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGCTGCTCACACAGTTGTaGGGCACTTTGCTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KKAGGPGIGEETRKGVTKLLTQL*GTLLQA Trigger: GGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCAG...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGATGTGGTGAGCTCCTaGGAACCCTGGGCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ICSISHSGDTENGQDMVPDVVSS*EPWARG Trigger: CCCCCTGGCCCAGGGTTCCAAGGAGCTCACCACATC...AGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTCGGGAAGATGCTTTCTaGGAGGGCAGCCCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ICSISHSGDTENGQDMVPREDAF*EGSPRA Trigger: GGCTCTGGGGCTGCCCTCCAAGAAAGCATCTTCCCG...AGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGTGTCTCCGATATAGCTaGGAGTTGCTGGCACCCTCG | + |
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Preference number: 5 (lower is better) Translates to: KKAGGPGIGEETRKGVTKCLRYS*ELLAPS Trigger: CGAGGGTGCCAGCAACTCCAAGCTATATCGGAGACA...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | ATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGTTCCTCGTCCCTCTaGGCCTCTCCCAGGCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: IKHTVSICSISHSGDTENGSSSL*ASPRRW Trigger: CCAGCGCCTGGGAGAGGCCAAGAGGGACGAGGAACC...ATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | GAAGCTGAAGCAGGAAAGAGGCTTGGGTCATCTTTCCCTAGAGACCCGAGGCTAAGGCATTCGTTGGATTaGAAGCTTGCCAGGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: EAEAGKRLGSSFPRDPRLRHSLD*KLARDL Trigger: CAAGTCCCTGGCAAGCTTCAAATCCAACGAATGCCT...TAGCCTCGGGTCTCTAGGGAAAGATGACCCAAGCCTCTTTCCTGCTTCAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS GCA 90 bp | GCTGGCCCTGCTGGGGCACAAGCTTTAAATCGGTGGCTGAGGATCTaGTCTAAAATGGCTGCGAAATTAACAAACTCCTCGGAAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: AGPAGAQALNRWLRI*SKMAAKLTNSSEES Trigger: TGACTCTTCCGAGGAGTTTGTTAATTTCGCAGCCATTTTAGAGCAGATCCTCAGCCACCGATTTAAAGCTTGTGCCCCAGCAGGGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | CACACACAGTCACAAACACAGTGTGGTGAGTTACATGTCCAAAGCCTGCCTCGTATGCTGCTCACACAGTaGTTGGGCACTTTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: HTQSQTQCGELHVQSLPRMLLTQ*LGTLLQ Trigger: CTGCAGCAAAGTGCCCAACAACTGTGTGAGCAGCAT...ACGAGGCAGGCTTTGGACATGTAACTCACCACACTGTGTTTGTGACTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | ATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGATGTGGTGAGCTCCTaGGAACCCTGGGCCAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: IKHTVSICSISHSGDTENDVVSS*EPWARG Trigger: CCCCCTGGCCCAGGGTTCCAAGGAGCTCACCACATC...ATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS GCA 90 bp | GAGCTGAACCAGCTCGCTGGCCCTTTAAATCGGTGGCTGAGGATCTaGTCTAAAATGGCTGCGAAATTAACAAACTCCTCGGAAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: ELNQLAGPLNRWLRI*SKMAAKLTNSSEES Trigger: TGACTCTTCCGAGGAGTTTGTTAATTTCGCAGCCATTTTAGAGCAGATCCTCAGCCACCGATTTAAAGGGCCAGCGAGCTGGTTCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107103.8 |
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| CDS-3UTR CAA 90 bp | GAAGAAATCAGAAGGAACCAGGCAGCCTTCAGAGCCACCAGAATGGAGCGCTGTTCCATCTTGTGCCACTaGTTGTACCAACTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: EEIRRNQAAFRATRMERCSILCH*LYQLSS Trigger: TGAAGACAGTTGGTACAACAAGTGGCACAAGATGGA...ACAGCGCTCCATTCTGGTGGCTCTGAAGGCTGCCTGGTTCCTTCTGATTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATCTTCTCACGCTGATTTaGTGCCGCGGCCTCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SEHLLYFTLWGYREWTRHLLTLI*CRGLLQ Trigger: CTGGAGGAGGCCGCGGCACAAAATCAGCGTGAGAAG...ATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | TTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATGGTCCCTGATGCTGCTCACACAGTaGTTGGGCACTTTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: FALFHTLGIQRMDKTWSLMLLTQ*LGTLLQ Trigger: CTGCAGCAAAGTGCCCAACAACTGTGTGAGCAGCAT...CAGGGACCATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACACTTCTCACGCTGATTTaGTGCCGCGGCCTCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PFIKHTVSICSISHSGDTLLTLI*CRGLLQ Trigger: CTGGAGGAGGCCGCGGCACAAAATCAGCGTGAGAAG...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | AGTTACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATCTGCTCACACAGTTGTaGGGCACTTTGCTGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SYMSKACLVSKSSYPIQYLLTQL*GTLLQA Trigger: GGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCAG...ATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | AAAAAGGCAGGAGGTCCAGGCATAGGGGAAGAAACTAGGAAGGGAGTAACCAAGATCTTGTGCCACTTGTaGTACCAACTGTCTTCATCG | + |
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Preference number: 5 (lower is better) Translates to: KKAGGPGIGEETRKGVTKILCHL*YQLSSS Trigger: CGATGAAGACAGTTGGTACAACAAGTGGCACAAGAT...CTTGGTTACTCCCTTCCTAGTTTCTTCCCCTATGCCTGGACCTCCTGCCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | AGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAGACATTGTCTCCGATATAGCTaGGAGTTGCTGGCACCCTCG | + |
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Preference number: 5 (lower is better) Translates to: SEHLLYFTLWGYREWTRHCLRYS*ELLAPS Trigger: CGAGGGTGCCAGCAACTCCAAGCTATATCGGAGACA...ATGTCTTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | CACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACAGAGAATGGACAAATCTTGTGCCACTTGTaGTACCAACTGTCTTCATCG | + |
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Preference number: 5 (lower is better) Translates to: HTVSICSISHSGDTENGQILCHL*YQLSSS Trigger: CGATGAAGACAGTTGGTACAACAAGTGGCACAAGAT...TTGTCCATTCTCTGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | CCATTTATTAAGCACACAGTGAGCATTTGCTCTATTTCACACTCTGGGGATACATCCATCTTGTGCCACTaGTTGTACCAACTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PFIKHTVSICSISHSGDTSILCH*LYQLSS Trigger: TGAAGACAGTTGGTACAACAAGTGGCACAAGATGGA...TGTATCCCCAGAGTGTGAAATAGAGCAAATGCTCACTGTGTGCTTAATAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | TACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAATATCTTGTGCCACTTGTaGTACCAACTGTCTTCATCG | + |
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Preference number: 5 (lower is better) Translates to: YMSKACLVSKSSYPIQYNILCHL*YQLSSS Trigger: CGATGAAGACAGTTGGTACAACAAGTGGCACAAGAT...ATTATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS-3UTR CAA 90 bp | TACATGTCCAAAGCCTGCCTCGTCTCAAAGTCGAGTTATCCAATACAATATAATTCCATCTTGTGCCACTaGTTGTACCAACTGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YMSKACLVSKSSYPIQYNSILCH*LYQLSS Trigger: TGAAGACAGTTGGTACAACAAGTGGCACAAGATGGA...ATTATATTGTATTGGATAACTCGACTTTGAGACGAGGCAGGCTTTGGACATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS CCA 72 bp | CCTTCCCGATGGGGCCCCAGGGTTCCTCGTCCCTCTTaGCCTCTCCCAGGCGCTGGGAGTCTGAGCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PSRWGPRVPRPS*PLPGAGSLSSG Trigger: GCCTGAGCTCAGACTCCCAGCGCCTGGGAGAGGCCAAGAGGGACGAGGAACCCTGGGGCCCCATCGGGAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS CCA 72 bp | AGCTTCCGATGGGGCCCCAGGGTTCCTCGTCCCTCTTaGCCTCTCCCAGGCGCTGGGAGTCTGAGCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SFRWGPRVPRPS*PLPGAGSLSSG Trigger: GCCTGAGCTCAGACTCCCAGCGCCTGGGAGAGGCCAAGAGGGACGAGGAACCCTGGGGCCCCATCGGAAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS CAA 90 bp | CTGAGCGCCGGGCTGCCCTCAGGGCTGTCGCTCACCAGGCATTCGTaGGATTTGAAGCTTGCCAGGGACTTGCAGCTGGGGATGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSAGLPSGLSLTRHS*DLKLARDLQLGMEA Trigger: GGCCTCCATCCCCAGCTGCAAGTCCCTGGCAAGCTTCAAATCCAACGAATGCCTGGTGAGCGACAGCCCTGAGGGCAGCCCGGCGCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS TCA 72 bp | TCCAGGATCACGCCTTCCAGCTCCCGCTTCTCACGCTaGTTTTGTGCCGCGGCCTCCTCCAGCTGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRITPSSSRFSR*FCAAASSSCSC Trigger: GCAGCTGCAGCTGGAGGAGGCCGCGGCACAAAATCAGCGTGAGAAGCGGGAGCTGGAAGGCGTGATCCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS GCA 72 bp | GCAGGTAGGGGTGCTCTGGTGAGTTGTCCTCGCTGGTaGTGCTCTCGGCACTGTGCCTCTCCTCCTCATCCG | + |
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Preference number: 6 (lower is better) Translates to: AGRGALVSCPRW*CSRHCASPPHP Trigger: CGGATGAGGAGGAGAGGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCACCAGAGCACCCCTACCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS GCA 72 bp | GGTAGGGGTGCTCTGGTGAGTTGTCCTCGCTGGTGCTaGTCTCGGCACTGTGCCTCTCCTCCTCATCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: GRGALVSCPRWC*SRHCASPPHPS Trigger: TGACGGATGAGGAGGAGAGGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCACCAGAGCACCCCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS CCA 72 bp | GAGGCAGGTAGGGGTGCTCTGGTGAGTTGTCCTCGCTaGTGCTGCTCTCGGCACTGTGCCTCTCCTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: EAGRGALVSCPR*CCSRHCASPPH Trigger: ATGAGGAGGAGAGGCACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCACCAGAGCACCCCTACCTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS CAA 72 bp | GGGCTGCCCTCAGGGCTGTCGCTCACCAGGCATTCGTaGGATTTGAAGCTTGCCAGGGACTTGCAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GLPSGLSLTRHS*DLKLARDLQLG Trigger: CCCCAGCTGCAAGTCCCTGGCAAGCTTCAAATCCAACGAATGCCTGGTGAGCGACAGCCCTGAGGGCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS TCA 72 bp | TTCATCGGTGACGAGAGGCAGGTAGGGGTGCTCTGGTaGGTTGTCCTCGCTGGTGCTGCTCTCGGCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: FIGDERQVGVLW*VVLAGAALGTV Trigger: CACAGTGCCGAGAGCAGCACCAGCGAGGACAACTCACCAGAGCACCCCTACCTGCCTCTCGTCACCGATGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS TCA 72 bp | CCTCAGGGCTGTCGCTCACCAGGCATTCGTTGGATTTaGAGCTTGCCAGGGACTTGCAGCTGGGGATGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PQGCRSPGIRWI*SLPGTCSWGWR Trigger: CCTCCATCCCCAGCTGCAAGTCCCTGGCAAGCTTCAAATCCAACGAATGCCTGGTGAGCGACAGCCCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS CAA 72 bp | CCCTCAGGGCTGTCGCTCACCAGGCATTCGTTGGATTaGAAGCTTGCCAGGGACTTGCAGCTGGGGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSGLSLTRHSLD*KLARDLQLGME Trigger: CTCCATCCCCAGCTGCAAGTCCCTGGCAAGCTTCAAATCCAACGAATGCCTGGTGAGCGACAGCCCTGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006750.8 |
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| CDS TCA 72 bp | CAGCCGGATGTAGTCCCAGAAGCCCCGTTGTCCATCTaGGCTGAACCAGCTCGCTGGCCCTTTAAATCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QPDVVPEAPLSI*AEPARWPFKSV Trigger: CACCGATTTAAAGGGCCAGCGAGCTGGTTCAGCTCAGATGGACAACGGGGCTTCTGGGACTACATCCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107103.8 |
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| CDS GCA 72 bp | TCTCAATGCTGCTCACACAGTTGTTGGGCACTTTGCTaGAGGCCAGCCGGATGTAGTCCCAGAAGCCCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SQCCSHSCWALC*RPAGCSPRSPV Trigger: AACGGGGCTTCTGGGACTACATCCGGCTGGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCAGCATTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS TCA 72 bp | TCTTGTGCCACTTGTTGTACCAACTGTCTTCATCGGTaGCGAGAGGCAGGTAGGGGTGCTCTGGTGAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SCATCCTNCLHR*REAGRGALVSC Trigger: ACAACTCACCAGAGCACCCCTACCTGCCTCTCGTCACCGATGAAGACAGTTGGTACAACAAGTGGCACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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| CDS CCA 72 bp | CTCGCTGGCCCTGCTGGGGCACAAGCTTTAAATCGGTaGCTGAGGATCTGCTCTAAAATGGCTGCGAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: LAGPAGAQALNR*LRICSKMAAKL Trigger: TAATTTCGCAGCCATTTTAGAGCAGATCCTCAGCCACCGATTTAAAGCTTGTGCCCCAGCAGGGCCAGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107105.9 |
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| CDS GCA 72 bp | CAGCTCGCTGGCCCTTTAAATCGGTGGCTGAGGATCTaGTCTAAAATGGCTGCGAAATTAACAAACTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QLAGPLNRWLRI*SKMAAKLTNSS Trigger: CGAGGAGTTTGTTAATTTCGCAGCCATTTTAGAGCAGATCCTCAGCCACCGATTTAAAGGGCCAGCGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107103.8 |
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| CDS GCA 72 bp | GCTGGGGCACAAGCTTTAAATCGGTGGCTGAGGATCTaGTCTAAAATGGCTGCGAAATTAACAAACTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGAQALNRWLRI*SKMAAKLTNSS Trigger: CGAGGAGTTTGTTAATTTCGCAGCCATTTTAGAGCAGATCCTCAGCCACCGATTTAAAGCTTGTGCCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107105.9 |
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| CDS CAA 72 bp | ACAATGCGAAACTTCTGTTCCATCTTGTGCCACTTGTaGTACCAACTGTCTTCATCGGTGACGAGAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TMRNFCSILCHL*YQLSSSVTRGR Trigger: CCTGCCTCTCGTCACCGATGAAGACAGTTGGTACAACAAGTGGCACAAGATGGAACAGAAGTTTCGCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006750.8 ENSMUST00000107102.8 ENSMUST00000107103.8 ENSMUST00000107105.9 |
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