Pregenerated sensors for RUFY4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061815Ensembl transcript IDs: ENSMUST00000080167.11, ENSMUST00000127134.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCTGTGGACTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTaGGGCCCCAGCTTGCAGAAGAAAAGAGTAGTCAGACATCAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: ICGLPAVPSGPPQRC*GPSLQKKRVVRHQG Trigger: ACCCTGATGTCTGACTACTCTTTTCTTCTGCAAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGTCCACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR GCA 90 bp | GATGGGGGAGGGGGAGGGTGGCTAGGAAACATCTGGGCCCTGGGCTaGTCTTATTCATGGTCACGACTCACTGTGCTTCAAGGGACTTTA | + |
|
Preference number: 1 (lower is better) Translates to: DGGGGGWLGNIWALG*SYSWSRLTVLQGTL Trigger: TAAAGTCCCTTGAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCCCCTCCCCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR CCA 90 bp | CTTCTTATGGGTGATGGGGGAGGGGGAGGGTGGCTAGGAAACATCTaGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: LLMGDGGGGGWLGNI*ALGCSYSWSRLTVL Trigger: AAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCCCCTCCCCCATCACCCATAAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR CCA 90 bp | TGTATTTGGACTTCGCTTCTTATGGGTGATGGGGGAGGGGGAGGGTaGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: CIWTSLLMGDGGGGG*LGNIWALGCSYSWS Trigger: TGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCCCCTCCCCCATCACCCATAAGAAGCGAAGTCCAAATACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR GCA 90 bp | ACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTaGTTCAAGGGACTTTACAGAGAGGTTATGGCATGTCTTCCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: TSGPWAALIHGHDSL*FKGLYREVMACLPH Trigger: ATGAGGAAGACATGCCATAACCTCTCTGTAAAGTCCCTTGAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCAAGGGACGCCAGCTGTTCCCTCTaGCCCTCCACAGCGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGPGLLLFMVTTHCASRDASCSL*PSTAVL Trigger: CAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGC...GTCCCTTGAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR-3UTR CCA 90 bp | GCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTCCTCCACAGCGGTGCTaGGGCCCCAGCTTGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ARKHLGPGLLLFMVTTHCPPQRC*GPSLQK Trigger: CTTCTGCAAGCTGGGGCCCCAGCACCGCTGTGGAGG...ACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCCAATGTATTTGGACTTCGCTTCTTATGGGTGATGGGGGAGGGGGAGGGTGAGAAACAGGGAGAGTaGACTGGTGGGGCGGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: EPNVFGLRFLWVMGEGEGEKQGE*TGGAAG Trigger: ACCAGCCGCCCCACCAGTTCACTCTCCCTGTTTCTC...ACCCTCCCCCTCCCCCATCACCCATAAGAAGCGAAGTCCAAATACATTGGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR GCA 72 bp | TTCCACAGGAACGCAGAGCTAGGCCTATCTGTGGACTaGCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FHRNAELGLSVD*QLFPLALHSGA Trigger: AGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGTCCACAGATAGGCCTAGCTCTGCGTTCCTGTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR CCA 72 bp | ACTTCGCTTCTTATGGGTGATGGGGGAGGGGGAGGGTaGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: TSLLMGDGGGGG*LGNIWALGCSY Trigger: ATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCCCCTCCCCCATCACCCATAAGAAGCGAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR CCA 72 bp | CTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATaGTCACGACTCACTGTGCTTCAAGGGACTTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LGNIWALGCSYS*SRLTVLQGTLQ Trigger: CTGTAAAGTCCCTTGAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR TCA 72 bp | GCAATGATCTCTGAAGGAGATCGGAGGGGAGGTTCCTaGAGAGCCCAATGTATTTGGACTTCGCTTCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: AMISEGDRRGGS*RAQCIWTSLLM Trigger: CATAAGAAGCGAAGTCCAAATACATTGGGCTCTTCAGGAACCTCCCCTCCGATCTCCTTCAGAGATCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR TCA 72 bp | CGACTCAGTAAATCTGCGAAACACAAGATAAGGCAATaGTCTCTGAAGGAGATCGGAGGGGAGGTTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLSKSAKHKIRQ*SLKEIGGEVPE Trigger: TTCAGGAACCTCCCCTCCGATCTCCTTCAGAGATCATTGCCTTATCTTGTGTTTCGCAGATTTACTGAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | TGGACTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTGGAACAGCGGGACTCTaGGAACATGGGCCAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WTASCSLWPSTAVLGPQLGTAGL*EHGPGF Trigger: GAAGCCTGGCCCATGTTCTCAGAGTCCCGCTGTTCC...AAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTGCAGCATACCCAGGGTCCTTaGTCACCTCCTGCTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPAVPSGPPQRCWGPSLQHTQGP*SPPAAR Trigger: CCTTGCAGCAGGAGGTGATCAAGGACCCTGGGTATG...CTGCAAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTGCAGCAGCTGCTCTCCCCTaGAGCATCTCACCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TASCSLWPSTAVLGPQLAAAALP*SISPPL Trigger: CAGAGGAGGTGAGATGCTCCAGGGGAGAGCAGCTGC...TGCAAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | TGGACTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTTTCAGGAGGCACAGCTaGATCGACTCAGCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WTASCSLWPSTAVLGPQLFRRHS*IDSASW Trigger: CCAGCTGGCTGAGTCGATGCAGCTGTGCCTCCTGAA...AAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | TGGACTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTGGTTCCTCCAGTGTCTaGTTCCTGCAGCTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WTASCSLWPSTAVLGPQLGSSSV*FLQLLS Trigger: GGAGAGCAGCTGCAGGAACCAGACACTGGAGGAACC...AAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTGCAGTTGATCACCTCCTGCTaGAAGGGCACTTCTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPAVPSGPPQRCWGPSLQLITSC*KGTSDP Trigger: TGGGTCAGAAGTGCCCTTGCAGCAGGAGGTGATCAA...CTGCAAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | TGGACTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTAAGGTCCCAATCTGCTaGCCTTTTCTGGATCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WTASCSLWPSTAVLGPQLKVPIC*PFLDPF Trigger: GAAGGGATCCAGAAAAGGGCAGCAGATTGGGACCTT...AAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTGCATCCTCTGTTGCTGGATaGTGGCTGTTGAGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TASCSLWPSTAVLGPQLASSVAG*WLLSFP Trigger: TGGAAAACTCAACAGCCAGCATCCAGCAACAGAGGA...TGCAAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGGGCCTCCACAGAGCCTaGAAGGATACCGCCGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GRVARKHLGPGLLLFMVTGLHRA*KDTAET Trigger: TGTCTCGGCGGTATCCTTGCAGGCTCTGTGGAGGCC...CGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | AGGGGGAGGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCATCGACTCAGCCAGCTaGCCTCGGGCAAGGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGRVARKHLGPGLLLFMVIDSAS*PRARQS Trigger: ACTCTGCCTTGCCCGAGGCCAGCTGGCTGAGTCGAT...GACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | TGGACTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTAGAAAGGTGGGAAGATaGCTTGGCTGCAAGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WTASCSLWPSTAVLGPQLRKVGR*LGCKGL Trigger: TAAACCCTTGCAGCCAAGCCATCTTCCCACCTTTCT...AAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | CCCCTCAGTCCCTTCCACAGGAACGCAGAGCTAGGCCTATCTGTGGACTGCCAGGCCTCCTGCTGCTTCTaGTCCAGCTTCACTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLSPFHRNAELGLSVDCQASCCF*SSFTCN Trigger: GTTGCAAGTGAAGCTGGAGCAGAAGCAGCAGGAGGC...CTGGCAGTCCACAGATAGGCCTAGCTCTGCGTTCCTGTGGAAGGGACTGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGTTCCCTGGTGAGTTGTaGGTTCAGGAGGCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVARKHLGPGLLLFMVTFPGEL*VQEAQL Trigger: CAGCTGTGCCTCCTGAACCCACAACTCACCAGGGAA...CGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | GAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCCGGTCCGGCTGGGACTaGAACAGCGGGACTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETSGPWAALIHGHDSLCFRSGWD*NSGTLR Trigger: TCTCAGAGTCCCGCTGTTCCAGTCCCAGCCGGACCG...GAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTCAGTCCCTTCCACAGGAACGCAGAGCTAGGCCTATCTGTGGACTGCCAGTCTCTTCCAGAAAGGTaGGAAGATGGCTTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSPFHRNAELGLSVDCQSLPER*EDGLAA Trigger: TGCAGCCAAGCCATCTTCCCACCTTTCTGGAAGAGA...CTGGCAGTCCACAGATAGGCCTAGCTCTGCGTTCCTGTGGAAGGGACTGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | GAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCTGCTCTGGGGACAACTaGGGCTTCTGGAATCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ETSGPWAALIHGHDSLCFCSGDN*GFWNPP Trigger: GGGAGGATTCCAGAAGCCTCAGTTGTCCCCAGAGCA...GAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | AACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCAAGAGCGCCTGAAGTTCTaGTTCCTGTGCCCGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NIWALGCSYSWSRLTVLQERLKF*FLCPQL Trigger: CAGCTGCGGGCACAGGAAGCAGAACTTCAGGCGCTC...TTGAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | AGGGGGAGGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCGCATCTCACCTCCTCTaGAAAACCTTTGGGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRVARKHLGPGLLLFMVASHLL*KTFGFP Trigger: GGGAAACCCAAAGGTTTTCCAGAGGAGGTGAGATGC...GACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | GCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTCCTTCAAGCTCTGTCTaGTACATGGCGTCCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARKHLGPGLLLFMVTTHCPSSSV*YMASLL Trigger: GAGGAGGGACGCCATGTATCAGACAGAGCTTGAAGG...ACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | TCGGAGGGGAGGTTCCTGAAGAGCCCAATGTATTTGGACTTCGCTTCTTATGGGTCCAGGTCTGGCCGCTaGAGGTCCAAGTTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEGRFLKSPMYLDFASYGSRSGR*RSKLKA Trigger: TGCCTTCAACTTGGACCTGCAGCGGCCAGACCTGGA...CCCATAAGAAGCGAAGTCCAAATACATTGGGCTCTTCAGGAACCTCCCCTCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | GGGCCCCAGCTTGCAGAAGAAAAGAGTAGTCAGACATCAGGGTTGGGAAGAGAATCTGGTTCCTGCAGCTaGTCTCCCCTGGAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPQLAEEKSSQTSGLGRESGSCS*SPLEHL Trigger: GAGATGCTCCAGGGGAGAGCAGCTGCAGGAACCAGA...TTCTCTTCCCAACCCTGATGTCTGACTACTCTTTTCTTCTGCAAGCTGGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | AGGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTTCTCTGGTTGCATCCTaGAGACAGCTGGTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVARKHLGPGLLLFMVTTSLVAS*RQLVPP Trigger: TGGAGGAACCAGCTGTCTGCAGGATGCAACCAGAGA...AGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | AGGAGATCGGAGGGGAGGTTCCTGAAGAGCCCAATGTATTTGGACTTCGCTTCTGGCTTCATCCAGGTCTaGCCGCTGCAGGTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRSEGRFLKSPMYLDFASGFIQV*PLQVQV Trigger: AACTTGGACCTGCAGCGGCCAGACCTGGATGAAGCC...AGAAGCGAAGTCCAAATACATTGGGCTCTTCAGGAACCTCCCCTCCGATCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGTCCTTCTGGTCTAGCTaGAATCCTTCCCTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRVARKHLGPGLLLFMVTSFWSS*NPSLSV Trigger: AACAGAAAGGGAAGGATTTCAGCTAGACCAGAAGGA...CGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | GAGCTTTGGCATGTTCCCCTCAGTCCCTTCCACAGGAACGCAGAGCTAGGCCTACTGGATGCTGGCTGTTaGGTTTTCCAGGAATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELWHVPLSPFHRNAELGLLDAGC*VFQEFP Trigger: AGGAAATTCCTGGAAAACTCAACAGCCAGCATCCAG...TAGGCCTAGCTCTGCGTTCCTGTGGAAGGGACTGAGGGGAACATGCCAAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAATGTATTTGGACTTCGCTTCTTATGGGTGATGGGGGAGGGGGAGGGTCCTTCTGTTGTTCTCTaGTCTTCTGTCCCCGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPNVFGLRFLWVMGEGEGPSVVL*SSVPDR Trigger: TCTGTCGGGGACAGAAGATCAGAGAACAACAGAAGG...ACCCTCCCCCTCCCCCATCACCCATAAGAAGCGAAGTCCAAATACATTGGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | TCGGAGGGGAGGTTCCTGAAGAGCCCAATGTATTTGGACTTCGCTTCTTATGGGGCGGTCTTCTCTGGTTaGATCCTGCAGACAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGRFLKSPMYLDFASYGAVFSG*ILQTAG Trigger: ACCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGC...CCCATAAGAAGCGAAGTCCAAATACATTGGGCTCTTCAGGAACCTCCCCTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | TCGGAGGGGAGGTTCCTGAAGAGCCCAATGTATTTGGACTTCGCTTCTTATGGGGGGACTCTGAGAACATaGGCCAGGCTTCATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGRFLKSPMYLDFASYGGTLRT*ARLHPG Trigger: ACCTGGATGAAGCCTGGCCCATGTTCTCAGAGTCCC...CCCATAAGAAGCGAAGTCCAAATACATTGGGCTCTTCAGGAACCTCCCCTCCGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | GGGCCCCAGCTTGCAGAAGAAAAGAGTAGTCAGACATCAGGGTTGGGAAGAGAAGTGTGCGGTCTTCTCTaGTTGCATCCTGCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPQLAEEKSSQTSGLGREVCGLL*LHPADS Trigger: GCTGTCTGCAGGATGCAACCAGAGAAGACCGCACAC...TTCTCTTCCCAACCCTGATGTCTGACTACTCTTTTCTTCTGCAAGCTGGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | GAGCTTTGGCATGTTCCCCTCAGTCCCTTCCACAGGAACGCAGAGCTAGGCCTATCTGCTGCCCTTTTCTaGATCCCTTCTGTTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELWHVPLSPFHRNAELGLSAALF*IPSVVL Trigger: GAGAACAACAGAAGGGATCCAGAAAAGGGCAGCAGA...TAGGCCTAGCTCTGCGTTCCTGTGGAAGGGACTGAGGGGAACATGCCAAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | CAGCTTGCAGAAGAAAAGAGTAGTCAGACATCAGGGTTGGGAAGAGAAACAGGGCTTTTTGACACCTGCTaGGCTGCTCCTGGAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLAEEKSSQTSGLGRETGLFDTC*AAPGAP Trigger: AGGCGCTCCAGGAGCAGCTCAGCAGGTGTCAAAAAG...CCCTGTTTCTCTTCCCAACCCTGATGTCTGACTACTCTTTTCTTCTGCAAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR TCA 90 bp | ACAATGCTTCTAGAGCTTTGGCATGTTCCCCTCAGTCCCTTCCACAGGAACGCAAGGGCTCTTTCTTTTTaGCACCTGCTGAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TMLLELWHVPLSPFHRNARALSF*HLLSCS Trigger: GGAGCAGCTCAGCAGGTGTCAAAAAGAAAGAGCCCT...TGCGTTCCTGTGGAAGGGACTGAGGGGAACATGCCAAAGCTCTAGAAGCATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | GAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCTTTCCAGGAATTTCCTaGGCTTTGGGCCTCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETSGPWAALIHGHDSLCFFPGIS*ALGLHP Trigger: AGGATGGAGGCCCAAAGCCCAGGAAATTCCTGGAAA...GAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGCTTGTGGCTTCTCTGTaGGAGAACTTTTCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRVARKHLGPGLLLFMVTLVASL*ENFSLF Trigger: GAACAAAGAAAAGTTCTCCCACAGAGAAGCCACAAG...CGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | GAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCTCCTGTCCACTCTTGTaGCTTCTCTGTGGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ETSGPWAALIHGHDSLCFSCPLL*LLCGRT Trigger: AGTTCTCCCACAGAGAAGCCACAAGAGTGGACAGGA...GAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | ACAATGCTTCTAGAGCTTTGGCATGTTCCCCTCAGTCCCTTCCACAGGAACGCACCTGCATGGTTCCACTaGTCACTCCTGTCCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TMLLELWHVPLSPFHRNAPAWFH*SLLSTL Trigger: AAGAGTGGACAGGAGTGACCAGTGGAACCATGCAGG...TGCGTTCCTGTGGAAGGGACTGAGGGGAACATGCCAAAGCTCTAGAAGCATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | AGGAGATCGGAGGGGAGGTTCCTGAAGAGCCCAATGTATTTGGACTTCGCTTCTTACAGAGGTCAGGTGTaGGGTCTTCTCTGGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRSEGRFLKSPMYLDFASYRGQV*GLLWLH Trigger: ATGCAACCAGAGAAGACCGCACACCTGACCTCTGTA...AGAAGCGAAGTCCAAATACATTGGGCTCTTCAGGAACCTCCCCTCCGATCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCTTCCTTCCTGTCAGCTaGATTTTAACATCCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWLGNIWALGCSYSWSRLFLPVS*ILTSLA Trigger: GGCTAAGGATGTTAAAATGCAGCTGACAGGAAGGAA...GAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CCA 90 bp | CAGCTTGCAGAAGAAAAGAGTAGTCAGACATCAGGGTTGGGAAGAGAAACAGGGGCTCTGTCTGATACATaGCGTCCCTCCTCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLAEEKSSQTSGLGRETGALSDT*RPSSQP Trigger: AGGCTGAGAGGAGGGACGCCATGTATCAGACAGAGC...CCCTGTTTCTCTTCCCAACCCTGATGTCTGACTACTCTTTTCTTCTGCAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| 3UTR CAA 72 bp | CATGTCTTCCTCATCAGACACAATGCTTCTAGAGCTTaGGCATGTTCCCCTCAGTCCCTTCCACAGGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: HVFLIRHNASRA*ACSPQSLPQER Trigger: GCGTTCCTGTGGAAGGGACTGAGGGGAACATGCCAAAGCTCTAGAAGCATTGTGTCTGATGAGGAAGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR GCA 90 bp | GAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCTGCTCCAGCTTCACTTaGAACAGGGCTCTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETSGPWAALIHGHDSLCFCSSFT*NRALSF Trigger: AAAAGAAAGAGCCCTGTTGCAAGTGAAGCTGGAGCA...GAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS CCA 90 bp | TGTGCCCGCAGCTGCTCCTGGCACTGGGCCTGTTCCTTTGCCAGCTaGAGCCCATACCCAGGGTCCTTGATCACCTCCTGCTGCAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CARSCSWHWACSFAS*SPYPGSLITSCCKG Trigger: GCCCTTGCAGCAGGAGGTGATCAAGGACCCTGGGTATGGGCTCCAGCTGGCAAAGGAACAGGCCCAGTGCCAGGAGCAGCTGCGGGCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGCTGTTCCCTCTGGCCCTCCACAGCGGTGCTGGGGCCCCAGCTTGCAGCACTCCTGTCCACTCTaGTGGCTTCTCTGTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPAVPSGPPQRCWGPSLQHSCPL*WLLCGR Trigger: TCTCCCACAGAGAAGCCACAAGAGTGGACAGGAGTG...CTGCAAGCTGGGGCCCCAGCACCGCTGTGGAGGGCCAGAGGGAACAGCTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS TCA 90 bp | GGGTCTTCTTTTCCCGGTCCGGCTGGGACTGGAACAGCGGGACTCTaGGAACATGGGCCAGGCTTCATCCAGGTCTGGCCGCTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSSFPGPAGTGTAGL*EHGPGFIQVWPLQV Trigger: GACCTGCAGCGGCCAGACCTGGATGAAGCCTGGCCCATGTTCTCAGAGTCCCGCTGTTCCAGTCCCAGCCGGACCGGGAAAAGAAGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 90 bp | AGAGGTCAGGTGTGCGGTCTTCTCTGGTTGCATCCTGCAGACAGCTaGTTCCTCCAGTGTCTGGTTCCTGCAGCTGCTCTCCCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGQVCGLLWLHPADS*FLQCLVPAAALPWS Trigger: GCTCCAGGGGAGAGCAGCTGCAGGAACCAGACACTGGAGGAACCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGCACACCTGACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 90 bp | TTTGCCAGCTGGAGCCCATACCCAGGGTCCTTGATCACCTCCTGCTaGAAGGGCACTTCTGACCCATCCTCCTGCATGGTTCCACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FASWSPYPGSLITSC*KGTSDPSSCMVPLV Trigger: GACCAGTGGAACCATGCAGGAGGATGGGTCAGAAGTGCCCTTGCAGCAGGAGGTGATCAAGGACCCTGGGTATGGGCTCCAGCTGGCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 90 bp | GTGAGTTGTGGGTTCAGGAGGCACAGCTGCATCGACTCAGCCAGCTaGCCTCGGGCAAGGCAGAGTCGGATAAAGGCACGACCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSCGFRRHSCIDSAS*PRARQSRIKARPFP Trigger: AGGAAAAGGTCGTGCCTTTATCCGACTCTGCCTTGCCCGAGGCCAGCTGGCTGAGTCGATGCAGCTGTGCCTCCTGAACCCACAACTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 90 bp | AACCTTTGGGTTTCCCGGGTCTTCTTTTCCCGGTCCGGCTGGGACTaGAACAGCGGGACTCTGAGAACATGGGCCAGGCTTCATCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NLWVSRVFFSRSGWD*NSGTLRTWARLHPG Trigger: ACCTGGATGAAGCCTGGCCCATGTTCTCAGAGTCCCGCTGTTCCAGTCCCAGCCGGACCGGGAAAAGAAGACCCGGGAAACCCAAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 90 bp | GACAGCTGGTTCCTCCAGTGTCTGGTTCCTGCAGCTGCTCTCCCCTaGAGCATCTCACCTCCTCTGGAAAACCTTTGGGTTTCCCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DSWFLQCLVPAAALP*SISPPLENLWVSRV Trigger: GACCCGGGAAACCCAAAGGTTTTCCAGAGGAGGTGAGATGCTCCAGGGGAGAGCAGCTGCAGGAACCAGACACTGGAGGAACCAGCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 90 bp | GTCTTCTCTGGTTGCATCCTGCAGACAGCTGGTTCCTCCAGTGTCTaGTTCCTGCAGCTGCTCTCCCCTGGAGCATCTCACCTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFSGCILQTAGSSSV*FLQLLSPGASHLLW Trigger: CCAGAGGAGGTGAGATGCTCCAGGGGAGAGCAGCTGCAGGAACCAGACACTGGAGGAACCAGCTGTCTGCAGGATGCAACCAGAGAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 90 bp | GCATCCTGCAGACAGCTGGTTCCTCCAGTGTCTGGTTCCTGCAGCTaGTCTCCCCTGGAGCATCTCACCTCCTCTGGAAAACCTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASCRQLVPPVSGSCS*SPLEHLTSSGKPLG Trigger: ACCCAAAGGTTTTCCAGAGGAGGTGAGATGCTCCAGGGGAGAGCAGCTGCAGGAACCAGACACTGGAGGAACCAGCTGTCTGCAGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTCAGTCCCTTCCACAGGAACGCAGAGCTAGGCCTATCTGTGGACTGCCAGAGGTGGGAAGATGGCTaGGCTGCAAGGGTTTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLSPFHRNAELGLSVDCQRWEDG*AARVYR Trigger: TCTGTAAACCCTTGCAGCCAAGCCATCTTCCCACCT...CTGGCAGTCCACAGATAGGCCTAGCTCTGCGTTCCTGTGGAAGGGACTGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCAAGGGACCCATACCCAGGGTCCTaGATCACCTCCTGCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGPGLLLFMVTTHCASRDPYPGS*ITSCCK Trigger: CTTGCAGCAGGAGGTGATCAAGGACCCTGGGTATGG...GTCCCTTGAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CAA 90 bp | CTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCCTGCTGGGCACAGGTaGGGCAGCAACGCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGNIWALGCSYSWSRLTVPAGHR*GSNALS Trigger: AGAGAGAGCGTTGCTGCCCAACCTGTGCCCAGCAGG...CACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS GCA 90 bp | AGGTGGGAAGATGGCTTGGCTGCAAGGGTTTACAGAGGTCAGGTGTaGGGTCTTCTCTGGTTGCATCCTGCAGACAGCTGGTTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RWEDGLAARVYRGQV*GLLWLHPADSWFLQ Trigger: CTGGAGGAACCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGCACACCTGACCTCTGTAAACCCTTGCAGCCAAGCCATCTTCCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCCAATGTATTTGGACTTCGCTTCTTATGGGTGATGGGGGAGGGGGAGGGTTCCCAGGACCCAGGATaGCCTGAGAACATCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPNVFGLRFLWVMGEGEGSQDPG*PENIRL Trigger: CAGCCTGATGTTCTCAGGCAATCCTGGGTCCTGGGA...ACCCTCCCCCTCCCCCATCACCCATAAGAAGCGAAGTCCAAATACATTGGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CAA 90 bp | GAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCACTGGGCCTGTTCCTTaGCCAGCTGGAGCCCATACC | + |
|
Preference number: 5 (lower is better) Translates to: ETSGPWAALIHGHDSLCFTGPVP*PAGAHT Trigger: GGTATGGGCTCCAGCTGGCAAAGGAACAGGCCCAGT...GAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS GCA 90 bp | AAGGGTTTACAGAGGTCAGGTGTGCGGTCTTCTCTGGTTGCATCCTaGAGACAGCTGGTTCCTCCAGTGTCTGGTTCCTGCAGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGLQRSGVRSSLVAS*RQLVPPVSGSCSCS Trigger: AGAGCAGCTGCAGGAACCAGACACTGGAGGAACCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGCACACCTGACCTCTGTAAACCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 90 bp | TCCTTGATCACCTCCTGCTGCAAGGGCACTTCTGACCCATCCTCCTaGATGGTTCCACTGGTCACTCCTGTCCACTCTTGTGGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLITSCCKGTSDPSS*MVPLVTPVHSCGFS Trigger: AGAGAAGCCACAAGAGTGGACAGGAGTGACCAGTGGAACCATGCAGGAGGATGGGTCAGAAGTGCCCTTGCAGCAGGAGGTGATCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 90 bp | CCTGCTGCAAGGGCACTTCTGACCCATCCTCCTGCATGGTTCCACTaGTCACTCCTGTCCACTCTTGTGGCTTCTCTGTGGGAGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PAARALLTHPPAWFH*SLLSTLVASLWENF Trigger: AAAGTTCTCCCACAGAGAAGCCACAAGAGTGGACAGGAGTGACCAGTGGAACCATGCAGGAGGATGGGTCAGAAGTGCCCTTGCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 90 bp | CCCATCCTCCTGCATGGTTCCACTGGTCACTCCTGTCCACTCTTGTaGCTTCTCTGTGGGAGAACTTTTCTTTGTTCCCAGGACCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PILLHGSTGHSCPLL*LLCGRTFLCSQDPG Trigger: TCCTGGGTCCTGGGAACAAAGAAAAGTTCTCCCACAGAGAAGCCACAAGAGTGGACAGGAGTGACCAGTGGAACCATGCAGGAGGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS-3UTR CAA 90 bp | AACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCACTGTGCTTCAATGCGGTCTTCTCTGGTaGCATCCTGCAGACAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NIWALGCSYSWSRLTVLQCGLLW*HPADSW Trigger: CCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGCA...TTGAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCTAGGAAACATCTGGGCCCTGGGCTGCTCTTATTCATGGTCACGACTCGCTGGATGCTGGCTGTaGAGTTTTCCAGGAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GWLGNIWALGCSYSWSRLAGCWL*SFPGIS Trigger: GGAAATTCCTGGAAAACTCAACAGCCAGCATCCAGC...GAGTCGTGACCATGAATAAGAGCAGCCCAGGGCCCAGATGTTTCCTAGCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS CCA 90 bp | TCTGGAATCCTCCCTCTTCTCTTCCAGAAAGGTGGGAAGATGGCTTaGCTGCAAGGGTTTACAGAGGTCAGGTGTGCGGTCTTCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGILPLLFQKGGKMA*LQGFTEVRCAVFSG Trigger: ACCAGAGAAGACCGCACACCTGACCTCTGTAAACCCTTGCAGCCAAGCCATCTTCCCACCTTTCTGGAAGAGAAGAGGGAGGATTCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCCCAGCTTGCAGAAGAAAAGAGTAGTCAGACATCAGGGTTGGGAAGAGAAGGAATTTCCTGGGCTTaGGGCCTCCATCCTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPQLAEEKSSQTSGLGREGISWA*GLHPSG Trigger: ACCAGAAGGATGGAGGCCCAAAGCCCAGGAAATTCC...TTCTCTTCCCAACCCTGATGTCTGACTACTCTTTTCTTCTGCAAGCTGGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CAA 90 bp | GAGCTTTGGCATGTTCCCCTCAGTCCCTTCCACAGGAACGCAGAGCTAGGCCTATGGGAGAACTTTTCTTaGTTCCCAGGACCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: ELWHVPLSPFHRNAELGLWENFS*FPGPRI Trigger: AATCCTGGGTCCTGGGAACAAAGAAAAGTTCTCCCA...TAGGCCTAGCTCTGCGTTCCTGTGGAAGGGACTGAGGGGAACATGCCAAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS CCA 90 bp | ACTGAAGGTCCTTCTCATGGATCAGTTCCAACACCCTCCTTTTCATaGCCTGGACCAGGTCCCTCTGCCCTTCAAGCTCTGTCTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: TEGPSHGSVPTPSFS*PGPGPSALQALSDT Trigger: TGTATCAGACAGAGCTTGAAGGGCAGAGGGACCTGGTCCAGGCCATGAAAAGGAGGGTGTTGGAACTGATCCATGAGAAGGACCTTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS TCA 90 bp | TTTAACATCCTTAGCCCTGCTCCTCTGTTGCTGGATGCTGGCTGTTaGGTTTTCCAGGAATTTCCTGGGCTTTGGGCCTCCATCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FNILSPAPLLLDAGC*VFQEFPGLWASILL Trigger: CAGAAGGATGGAGGCCCAAAGCCCAGGAAATTCCTGGAAAACTCAACAGCCAGCATCCAGCAACAGAGGAGCAGGGCTAAGGATGTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 90 bp | CCTGTCAGCTGCATTTTAACATCCTTAGCCCTGCTCCTCTGTTGCTaGATGCTGGCTGTTGAGTTTTCCAGGAATTTCCTGGGCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVSCILTSLALLLCC*MLAVEFSRNFLGFG Trigger: CCCAAAGCCCAGGAAATTCCTGGAAAACTCAACAGCCAGCATCCAGCAACAGAGGAGCAGGGCTAAGGATGTTAAAATGCAGCTGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS-3UTR CAA 90 bp | GAGATCGGAGGGGAGGTTCCTGAAGAGCCCAATGTATTTGGACTTCGCTTCTTACAGGGCTCTTTCTTTTaGACACCTGCTGAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EIGGEVPEEPNVFGLRFLQGSFF*TPAELL Trigger: GAGCAGCTCAGCAGGTGTCAAAAAGAAAGAGCCCTG...TAAGAAGCGAAGTCCAAATACATTGGGCTCTTCAGGAACCTCCCCTCCGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS TCA 90 bp | TCTCTGTGGGAGAACTTTTCTTTGTTCCCAGGACCCAGGATTGCCTaGGAACATCAGGCTGATTCCACTCACACCTGTATCCTAACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLWENFSLFPGPRIA*EHQADSTHTCILTL Trigger: CAGAGTTAGGATACAGGTGTGAGTGGAATCAGCCTGATGTTCTCAGGCAATCCTGGGTCCTGGGAACAAAGAAAAGTTCTCCCACAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 90 bp | CTTCCTGTCAGCTGCATTTTAACATCCTTAGCCCTGCTCCTCTGTTaGTGGATGCTGGCTGTTGAGTTTTCCAGGAATTTCCTGGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPVSCILTSLALLLC*WMLAVEFSRNFLGF Trigger: AAAGCCCAGGAAATTCCTGGAAAACTCAACAGCCAGCATCCAGCAACAGAGGAGCAGGGCTAAGGATGTTAAAATGCAGCTGACAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGCTTGCAGAAGAAAAGAGTAGTCAGACATCAGGGTTGGGAAGAGAAAAGTGAGGTCTTCAGCTaGTCCTGTGAGCATATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPSLQKKRVVRHQGWEEKSEVFS*SCEHMK Trigger: CTTCATATGCTCACAGGACAAGCTGAAGACCTCACT...TTTCTCTTCCCAACCCTGATGTCTGACTACTCTTTTCTTCTGCAAGCTGGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGCTTGCAGAAGAAAAGAGTAGTCAGACATCAGGGTTGGGAAGAGAAATCTGGATCCCTTCTGTaGTTCTCTGATCTTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPSLQKKRVVRHQGWEEKSGSLL*FSDLLS Trigger: GGACAGAAGATCAGAGAACAACAGAAGGGATCCAGA...TTTCTCTTCCCAACCCTGATGTCTGACTACTCTTTTCTTCTGCAAGCTGGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080167.11 |
||
| CDS GCA 72 bp | ACACCTGCTGAGCTGCTCCTGGAGCGCCTGAAGTTCTaGTTCCTGTGCCCGCAGCTGCTCCTGGCACTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TPAELLLERLKF*FLCPQLLLALG Trigger: GCCCAGTGCCAGGAGCAGCTGCGGGCACAGGAAGCAGAACTTCAGGCGCTCCAGGAGCAGCTCAGCAGGTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | GGGTTCAGGAGGCACAGCTGCATCGACTCAGCCAGCTaGCCTCGGGCAAGGCAGAGTCGGATAAAGGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: GFRRHSCIDSAS*PRARQSRIKAR Trigger: TCGTGCCTTTATCCGACTCTGCCTTGCCCGAGGCCAGCTGGCTGAGTCGATGCAGCTGTGCCTCCTGAACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | AGCTGCTCCTGGCACTGGGCCTGTTCCTTTGCCAGCTaGAGCCCATACCCAGGGTCCTTGATCACCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSWHWACSFAS*SPYPGSLITSC Trigger: GCAGGAGGTGATCAAGGACCCTGGGTATGGGCTCCAGCTGGCAAAGGAACAGGCCCAGTGCCAGGAGCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CAA 90 bp | CACTGGGCCTGTTCCTTTGCCAGCTGGAGCCCATACCCAGGGTCCTaGATCACCTCCTGCTGCAAGGGCACTTCTGACCCATCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HWACSFASWSPYPGS*ITSCCKGTSDPSSC Trigger: GCAGGAGGATGGGTCAGAAGTGCCCTTGCAGCAGGAGGTGATCAAGGACCCTGGGTATGGGCTCCAGCTGGCAAAGGAACAGGCCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | GTTTCCCGGGTCTTCTTTTCCCGGTCCGGCTGGGACTaGAACAGCGGGACTCTGAGAACATGGGCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSRVFFSRSGWD*NSGTLRTWARL Trigger: AAGCCTGGCCCATGTTCTCAGAGTCCCGCTGTTCCAGTCCCAGCCGGACCGGGAAAAGAAGACCCGGGAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | CTTTGGGTTTCCCGGGTCTTCTTTTCCCGGTCCGGCTaGGACTGGAACAGCGGGACTCTGAGAACATGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LWVSRVFFSRSG*DWNSGTLRTWA Trigger: GGCCCATGTTCTCAGAGTCCCGCTGTTCCAGTCCCAGCCGGACCGGGAAAAGAAGACCCGGGAAACCCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | GCTCCAGGCAGCCACAGAGTCTGTGTAGCTCAGCGCTaGTTTCTGTCACTGGCTCCTGCCCGTCCCCATATC | + |
|
Preference number: 6 (lower is better) Translates to: APGSHRVCVAQR*FLSLAPARPHI Trigger: GATATGGGGACGGGCAGGAGCCAGTGACAGAAACCAGCGCTGAGCTACACAGACTCTGTGGCTGCCTGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127134.2 |
||
| CDS TCA 72 bp | CACAGAGCCTGCAAGGATACCGCCGAGACAGACGCCTaGAGACCTTGTTGCAGCCTATGCAGTGTCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRACKDTAETDA*RPCCSLCSVQG Trigger: CCCCTGGACACTGCATAGGCTGCAACAAGGTCTTCAGGCGTCTGTCTCGGCGGTATCCTTGCAGGCTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS TCA 72 bp | TCTGCTCTGTGTATCCCCGGTGCCGTCGAAGGGCAGTaGATAGGAAGTCCCAGTAATCCTTCCGGGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SALCIPGAVEGQ*IGSPSNPSGPP Trigger: TGGGGGCCCGGAAGGATTACTGGGACTTCCTATTCACTGCCCTTCGACGGCACCGGGGATACACAGAGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | AGCTGGAGCCCATACCCAGGGTCCTTGATCACCTCCTaGTGCAAGGGCACTTCTGACCCATCCTCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SWSPYPGSLITS*CKGTSDPSSCM Trigger: CATGCAGGAGGATGGGTCAGAAGTGCCCTTGCAGCAGGAGGTGATCAAGGACCCTGGGTATGGGCTCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | GGTTGCATCCTGCAGACAGCTGGTTCCTCCAGTGTCTaGTTCCTGCAGCTGCTCTCCCCTGGAGCATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GCILQTAGSSSV*FLQLLSPGASH Trigger: GTGAGATGCTCCAGGGGAGAGCAGCTGCAGGAACCAGACACTGGAGGAACCAGCTGTCTGCAGGATGCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | GAGAACATGGGCCAGGCTTCATCCAGGTCTGGCCGCTaGAGGTCCAAGTTGAAGGCAACTCCATTGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ENMGQASSRSGR*RSKLKATPLRA Trigger: TGCCCTCAATGGAGTTGCCTTCAACTTGGACCTGCAGCGGCCAGACCTGGATGAAGCCTGGCCCATGTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | CAGAGGTCAGGTGTGCGGTCTTCTCTGGTTGCATCCTaGAGACAGCTGGTTCCTCCAGTGTCTGGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QRSGVRSSLVAS*RQLVPPVSGSC Trigger: GCAGGAACCAGACACTGGAGGAACCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGCACACCTGACCTCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | TGGAGCCCATACCCAGGGTCCTTGATCACCTCCTGCTaGAAGGGCACTTCTGACCCATCCTCCTGCATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WSPYPGSLITSC*KGTSDPSSCMV Trigger: AACCATGCAGGAGGATGGGTCAGAAGTGCCCTTGCAGCAGGAGGTGATCAAGGACCCTGGGTATGGGCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | GTGTGCGGTCTTCTCTGGTTGCATCCTGCAGACAGCTaGTTCCTCCAGTGTCTGGTTCCTGCAGCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VCGLLWLHPADS*FLQCLVPAAAL Trigger: GAGAGCAGCTGCAGGAACCAGACACTGGAGGAACCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGCACAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS TCA 72 bp | GGGGCCACAGTAGACAGCTGCTGGAGTCTCTGCCACTaGAGGTCCTTCTCATGGATCAGTTCCAACACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GATVDSCWSLCH*RSFSWISSNTL Trigger: GAGGGTGTTGGAACTGATCCATGAGAAGGACCTTCAGTGGCAGAGACTCCAGCAGCTGTCTACTGTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | AGACAGCTGGTTCCTCCAGTGTCTGGTTCCTGCAGCTaGTCTCCCCTGGAGCATCTCACCTCCTCTGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RQLVPPVSGSCS*SPLEHLTSSGK Trigger: TTTTCCAGAGGAGGTGAGATGCTCCAGGGGAGAGCAGCTGCAGGAACCAGACACTGGAGGAACCAGCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | GGGTTTACAGAGGTCAGGTGTGCGGTCTTCTCTGGTTaGATCCTGCAGACAGCTGGTTCCTCCAGTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GFTEVRCAVFSG*ILQTAGSSSVW Trigger: CCAGACACTGGAGGAACCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGCACACCTGACCTCTGTAAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | GATGGCTTGGCTGCAAGGGTTTACAGAGGTCAGGTGTaGGGTCTTCTCTGGTTGCATCCTGCAGACAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DGLAARVYRGQV*GLLWLHPADSW Trigger: CCAGCTGTCTGCAGGATGCAACCAGAGAAGACCGCACACCTGACCTCTGTAAACCCTTGCAGCCAAGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | AGGGCACTTCTGACCCATCCTCCTGCATGGTTCCACTaGTCACTCCTGTCCACTCTTGTGGCTTCTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RALLTHPPAWFH*SLLSTLVASLW Trigger: CCACAGAGAAGCCACAAGAGTGGACAGGAGTGACCAGTGGAACCATGCAGGAGGATGGGTCAGAAGTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | GTCTTCAGCTTGTCCTGTGAGCATATGAAGCTCATCTaGTCTGTGTATCCCCGGTGCCGTCGAAGGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VFSLSCEHMKLI*SVYPRCRRRAV Trigger: CACTGCCCTTCGACGGCACCGGGGATACACAGAGCAGATGAGCTTCATATGCTCACAGGACAAGCTGAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | TTCCTCCAGTGTCTGGTTCCTGCAGCTGCTCTCCCCTaGAGCATCTCACCTCCTCTGGAAAACCTTTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FLQCLVPAAALP*SISPPLENLWV Trigger: AACCCAAAGGTTTTCCAGAGGAGGTGAGATGCTCCAGGGGAGAGCAGCTGCAGGAACCAGACACTGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | CTCCCTCTTCTCTTCCAGAAAGGTGGGAAGATGGCTTaGCTGCAAGGGTTTACAGAGGTCAGGTGTGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPLLFQKGGKMA*LQGFTEVRCAV Trigger: GACCGCACACCTGACCTCTGTAAACCCTTGCAGCCAAGCCATCTTCCCACCTTTCTGGAAGAGAAGAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CAA 72 bp | CCTCCCTCTTCTCTTCCAGAAAGGTGGGAAGATGGCTaGGCTGCAAGGGTTTACAGAGGTCAGGTGTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PPSSLPERWEDG*AARVYRGQVCG Trigger: ACCGCACACCTGACCTCTGTAAACCCTTGCAGCCAAGCCATCTTCCCACCTTTCTGGAAGAGAAGAGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CAA 72 bp | CTGCTCCAGCTTCACTTGCAACAGGGCTCTTTCTTTTaGACACCTGCTGAGCTGCTCCTGGAGCGCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLQLHLQQGSFF*TPAELLLERLK Trigger: CTTCAGGCGCTCCAGGAGCAGCTCAGCAGGTGTCAAAAAGAAAGAGCCCTGTTGCAAGTGAAGCTGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | TACATGGCGTCCCTCCTCTCAGCCTCCTGCTGCTTCTaGTCCAGCTTCACTTGCAACAGGGCTCTTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: YMASLLSASCCF*SSFTCNRALSF Trigger: AAAAGAAAGAGCCCTGTTGCAAGTGAAGCTGGAGCAGAAGCAGCAGGAGGCTGAGAGGAGGGACGCCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CAA 90 bp | TTCTGGAATCCTCCCTCTTCTCTTCCAGAAAGGTGGGAAGATGGCTaGGCTGCAAGGGTTTACAGAGGTCAGGTGTGCGGTCTTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FWNPPSSLPERWEDG*AARVYRGQVCGLLW Trigger: CCAGAGAAGACCGCACACCTGACCTCTGTAAACCCTTGCAGCCAAGCCATCTTCCCACCTTTCTGGAAGAGAAGAGGGAGGATTCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS TCA 72 bp | TTCCTAGTGAGGTCTTCAGCTTGTCCTGTGAGCATATaGAGCTCATCTGCTCTGTGTATCCCCGGTGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLVRSSACPVSI*SSSALCIPGAV Trigger: GACGGCACCGGGGATACACAGAGCAGATGAGCTTCATATGCTCACAGGACAAGCTGAAGACCTCACTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | GAATCCTCCCTCTTCTCTTCCAGAAAGGTGGGAAGATaGCTTGGCTGCAAGGGTTTACAGAGGTCAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ESSLFSSRKVGR*LGCKGLQRSGV Trigger: CACACCTGACCTCTGTAAACCCTTGCAGCCAAGCCATCTTCCCACCTTTCTGGAAGAGAAGAGGGAGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | CACTGGTCACTCCTGTCCACTCTTGTGGCTTCTCTGTaGGAGAACTTTTCTTTGTTCCCAGGACCCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: HWSLLSTLVASL*ENFSLFPGPRI Trigger: AATCCTGGGTCCTGGGAACAAAGAAAAGTTCTCCCACAGAGAAGCCACAAGAGTGGACAGGAGTGACCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CAA 72 bp | TGTGGGAGAACTTTTCTTTGTTCCCAGGACCCAGGATaGCCTGAGAACATCAGGCTGATTCCACTCACACCT | + |
|
Preference number: 6 (lower is better) Translates to: CGRTFLCSQDPG*PENIRLIPLTP Trigger: AGGTGTGAGTGGAATCAGCCTGATGTTCTCAGGCAATCCTGGGTCCTGGGAACAAAGAAAAGTTCTCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS GCA 72 bp | AGCTGCATTTTAACATCCTTAGCCCTGCTCCTCTGTTaGTGGATGCTGGCTGTTGAGTTTTCCAGGAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SCILTSLALLLC*WMLAVEFSRNF Trigger: GAAATTCCTGGAAAACTCAACAGCCAGCATCCAGCAACAGAGGAGCAGGGCTAAGGATGTTAAAATGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||
| CDS CCA 72 bp | TGCATTTTAACATCCTTAGCCCTGCTCCTCTGTTGCTaGATGCTGGCTGTTGAGTTTTCCAGGAATTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CILTSLALLLCC*MLAVEFSRNFL Trigger: CAGGAAATTCCTGGAAAACTCAACAGCCAGCATCCAGCAACAGAGGAGCAGGGCTAAGGATGTTAAAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080167.11 ENSMUST00000127134.2 |
||