Pregenerated sensors for RUFY3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029291Ensembl transcript IDs: ENSMUST00000031229.11, ENSMUST00000196686.2, ENSMUST00000196894.5, ENSMUST00000198965.5, ENSMUST00000199312.5
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGGGACTGGGCAGGGCCCTTGGCTTGCTCTGTGGGAGGGATTCTaGAAGTGCATATACTTACTTCTGGAGCCATCTGGTGGGAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: GGTGQGPWLALWEGF*KCIYLLLEPSGGKQ Trigger: TTGCTTCCCACCAGATGGCTCCAGAAGTAAGTATATGCACTTTCAGAATCCCTCCCACAGAGCAAGCCAAGGGCCCTGCCCAGTCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR TCA 90 bp | GGCCTAAGAGACAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTaGCACCTGTACACCATTACACTTCGGAGAACAGGCTCGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: GLRDRATLEESRVTR*HLYTITLRRTGSLV Trigger: CACCAGCGAGCCTGTTCTCCGAAGTGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTGTCTCTTAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR TCA 90 bp | AGGGCCACGGGACCCTCCATGAAGTTGGCTCTAACTCGGGCCTGGTaGGGACCTATAGAAACCCACGAACTCTGGTGCTCTCTTAATTCT | + |
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Preference number: 1 (lower is better) Translates to: RATGPSMKLALTRAW*GPIETHELWCSLNS Trigger: AGAATTAAGAGAGCACCAGAGTTCGTGGGTTTCTATAGGTCCTCACCAGGCCCGAGTTAGAGCCAACTTCATGGAGGGTCCCGTGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR GCA 90 bp | ACAACAGGCAGGACTCCACTGTGGCCTCAGGGATTCCAGCAGGACTaGAGGGCAGATGTGAACGTCGGATTTCTATTGACGTTCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TTGRTPLWPQGFQQD*RADVNVGFLLTFSL Trigger: CAGAGAGAACGTCAATAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCACAGTGGAGTCCTGCCTGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR TCA 90 bp | GCTGTAGCAACCTTACCCAGGCTTCACCTCCACAAGGACACTCTGTaGACGTCTGGCTGTCTCCTTCCTTTCCATTCCTACCAGGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: AVATLPRLHLHKDTL*TSGCLLPFHSYQVV Trigger: TACCACCTGGTAGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGTGAAGCCTGGGTAAGGTTGCTACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR CCA 90 bp | GCTTTATCACTTCATCGAAATAAAAATGCTCAAAGATGCTGGGCGTaGTGGTGCACGCCTTCAATCCCAGCACTCGGGAGGGAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: ALSLHRNKNAQRCWA*WCTPSIPALGRERQ Trigger: CTGCCTCTCCCTCCCGAGTGCTGGGATTGAAGGCGTGCACCACCACGCCCAGCATCTTTGAGCATTTTTATTTCGATGAAGTGATAAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR CCA 90 bp | TCTTTGAAAAGTGTTACTGTCCTTTATGGCTCAAGAGGGAGGGACTaGGCAGGGCCCTTGGCTTGCTCTGTGGGAGGGATTCTGAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: SLKSVTVLYGSRGRD*AGPLACSVGGILKV Trigger: CACTTTCAGAATCCCTCCCACAGAGCAAGCCAAGGGCCCTGCCCAGTCCCTCCCTCTTGAGCCATAAAGGACAGTAACACTTTTCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR TCA 90 bp | AACGTCTGGCTGTCTCCTTCCTTTCCATTCCTACCAGGTGGTATGTaGCCAAGCAAACAACTCAGCACTGGGGTTCCTAAGACTCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: NVWLSPSFPFLPGGM*PSKQLSTGVPKTPD Trigger: GTCAGGAGTCTTAGGAACCCCAGTGCTGAGTTGTTTGCTTGGTCACATACCACCTGGTAGGAATGGAAAGGAAGGAGACAGCCAGACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR GCA 90 bp | CAAGAAGGTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTaGCTCTCTCTTAGCACAGGCTATGCTACATGGGCATCGTGCGAG | + |
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Preference number: 1 (lower is better) Translates to: QEGKDFEELEAEGSL*LSLSTGYATWASCE Trigger: CTCGCACGATGCCCATGTAGCATAGCCTGTGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTACCTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR GCA 90 bp | TACAGCCCAGCTTTATCACTTCATCGAAATAAAAATGCTCAAAGATaGTGGGCGTGGTGGTGCACGCCTTCAATCCCAGCACTCGGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: YSPALSLHRNKNAQR*WAWWCTPSIPALGR Trigger: CCTCCCGAGTGCTGGGATTGAAGGCGTGCACCACCACGCCCAGCATCTTTGAGCATTTTTATTTCGATGAAGTGATAAAGCTGGGCTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR GCA 90 bp | CACTCATTAGAGAAGATGAGCAAAGGTCAGAGCACCTCTGAGCTCTaGCTTCCCCCTAGACACCGACCTGGTTTACTTCTGTCTTTCCTA | + |
|
Preference number: 1 (lower is better) Translates to: HSLEKMSKGQSTSEL*LPPRHRPGLLLSFL Trigger: TAGGAAAGACAGAAGTAAACCAGGTCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCTCTGACCTTTGCTCATCTTCTCTAATGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR TCA 90 bp | CTTAGCTTTACTTTAATCGTCTACTTGCAAGGTGAACCCCGTCTTTaGAAAGTGTTACTGTCCTTTATGGCTCAAGAGGGAGGGACTGGG | + |
|
Preference number: 1 (lower is better) Translates to: LSFTLIVYLQGEPRL*KVLLSFMAQEGGTG Trigger: CCCAGTCCCTCCCTCTTGAGCCATAAAGGACAGTAACACTTTTCAAAGACGGGGTTCACCTTGCAAGTAGACGATTAAAGTAAAGCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR CCA 90 bp | GGCTTGCTCTGTGGGAGGGATTCTGAAAGTGCATATACTTACTTCTaGAGCCATCTGGTGGGAAGCAACCAATGTTCACATAAAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: GLLCGRDSESAYTYF*SHLVGSNQCSHKEN Trigger: GTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCTCCAGAAGTAAGTATATGCACTTTCAGAATCCCTCCCACAGAGCAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR GCA 90 bp | AGTGTACCCCCACTTTTCCGCAAAGGTTTGTCACAAAGAGATGTTTaGTATTGTCCCTGCCTGTGGCTTCTGATCTGTAGTTCAGAATAT | + |
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Preference number: 1 (lower is better) Translates to: SVPPLFRKGLSQRDV*YCPCLWLLICSSEY Trigger: ATATTCTGAACTACAGATCAGAAGCCACAGGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTTGCGGAAAAGTGGGGGTACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR TCA 90 bp | GTTTGTCACAAAGAGATGTTTGCTATTGTCCCTGCCTGTGGCTTCTaGTCTGTAGTTCAGAATATGGACTGCTCATCCAATCAACAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: VCHKEMFAIVPACGF*SVVQNMDCSSNQQF Trigger: GAACTGTTGATTGGATGAGCAGTCCATATTCTGAACTACAGATCAGAAGCCACAGGCAGGGACAATAGCAAACATCTCTTTGTGACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACACAGGCTCGCTGGTGTaGACGGAGGCCCTCCTACAC | + |
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Preference number: 2 (lower is better) Translates to: QSYFRRVPGHQVTPVHHYTGSLV*TEALLH Trigger: GTGTAGGAGGGCCTCCGTCCACACCAGCGAGCCTGT...GTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCACAAGGACACTCTGTGAACGTCTGGCTGTCTCCTTCCTTTCCATTCCTACAGGCTCGCTGGTGTaGACGGAGGCCCTCCTACAC | + |
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Preference number: 2 (lower is better) Translates to: TSTRTLCERLAVSFLSIPTGSLV*TEALLH Trigger: GTGTAGGAGGGCCTCCGTCCACACCAGCGAGCCTGT...AGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGGTTGCATCTGTGGTCACTTAGAAAAGGCCCTGCTCGTATTGCTCGTGGGCAGGACTCCACTGTaGCCTCAGGGATTCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RKGCICGHLEKALLVLLVGRTPL*PQGFQQ Trigger: CTGCTGGAATCCCTGAGGCCACAGTGGAGTCCTGCC...CACGAGCAATACGAGCAGGGCCTTTTCTAAGTGACCACAGATGCAACCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR TCA 90 bp | GATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGGACTCCACTTCCCGGGTCACCAGGTaGCACCTGTACACCATTACA | + |
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Preference number: 2 (lower is better) Translates to: DQSSWASAVGEDNRQDSTSRVTR*HLYTIT Trigger: TGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGA...AGTGGAGTCCTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR GCA 90 bp | CCCCACTTTTCCGCAAAGGTTTGTCACAAAGAGATGTTTGCTATTGTCCCTGCCTGCTGGGCGTGGTGGTaGACGCCTTCAATCCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PHFSAKVCHKEMFAIVPACWAWW*TPSIPA Trigger: TGCTGGGATTGAAGGCGTGCACCACCACGCCCAGCA...GGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTTGCGGAAAAGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCTTGGCTTGCTCTGTGGGAGGGATTCTGAAAGTGCATATACTTACTTCTGGAGGGAGAGGCAGGTaGATTTCTGAGTTCGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GPLACSVGGILKVHILTSGGRGR*ISEFEA Trigger: GGCCTCGAACTCAGAAATCCACCTGCCTCTCCCTCC...AGAAGTAAGTATATGCACTTTCAGAATCCCTCCCACAGAGCAAGCCAAGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCTTGGCTTGCTCTGTGGGAGGGATTCTGAAAGTGCATATACTTACTTCTAGATGCTGGGCGTGGTaGTGCACGCCTTCAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: GPLACSVGGILKVHILTSRCWAW*CTPSIP Trigger: TGGGATTGAAGGCGTGCACCACCACGCCCAGCATCT...AGAAGTAAGTATATGCACTTTCAGAATCCCTCCCACAGAGCAAGCCAAGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTATCTTGGGCTGGGGGTTaGTTAAACCTACAGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: WPQGFQQDCRADVNVGFLSWAGG*LNLQKS Trigger: TGACTTCTGTAGGTTTAATCAACCCCCAGCCCAAGA...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCATCCCGGGTCACCAGGTaGCACCTGTACACCATTACA | + |
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Preference number: 2 (lower is better) Translates to: VKILKSWKQRGPFASLLASRVTR*HLYTIT Trigger: TGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGA...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCAGGATTCCAGCAGGACTaGAGGGCAGATGTGAACGTC | + |
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Preference number: 2 (lower is better) Translates to: VKILKSWKQRGPFASLLAGFQQD*RADVNV Trigger: GACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCC...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGTACCCCCACTTTTCCGCAAAGGTTTGTCACAAAGAGATGTTTGCTATTAGCACCTCTGAGCTCTaGCTTCCCCCTAGACACCGA | + |
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Preference number: 2 (lower is better) Translates to: SVYPHFSAKVCHKEMFAISTSEL*LPPRHR Trigger: TCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCT...AATAGCAAACATCTCTTTGTGACAAACCTTTGCGGAAAAGTGGGGGTACACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTACTAGAAACGGTCTTTTaGTTTACTGTTCAACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: WPQGFQQDCRADVNVGFLLETVF*FTVQLR Trigger: TCTGAGTTGAACAGTAAATCAAAAGACCGTTTCTAG...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTTTTCCGCAAAGGTTTGTCACAAAGAGATGTTTGCTATTGTCCCTGCCACTTCTGGAGCCATCTaGTGGGAAGCAACCAATGTT | + |
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Preference number: 2 (lower is better) Translates to: PHFSAKVCHKEMFAIVPATSGAI*WEATNV Trigger: AACATTGGTTGCTTCCCACCAGATGGCTCCAGAAGT...GGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTTGCGGAAAAGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACACTTCGGAGAACAGCTAGAAACGGTCTTTTaGTTTACTGTTCAACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: KSPGSPGDTCTPLHFGEQLETVF*FTVQLR Trigger: TCTGAGTTGAACAGTAAATCAAAAGACCGTTTCTAG...CTGTTCTCCGAAGTGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR GCA 90 bp | CTTTATTTATGCAGGTGCAAAATTGTAAGAATTCAAATGAGTTCAGGGCCACGGGCAGAGGGGTCCCTTTaGCTCTCTCTTAGCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: LYLCRCKIVRIQMSSGPRAEGSL*LSLSTG Trigger: GCCTGTGCTAAGAGAGAGGCAAAGGGACCCCTCTGC...CCGTGGCCCTGAACTCATTTGAATTCTTACAATTTTGCACCTGCATAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR CCA 90 bp | AGCCATCTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACCTGCTTTCTTGGCAGTaGTGCTGCAGTAGAAAGCGC | + |
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Preference number: 2 (lower is better) Translates to: SHLVGSNQCSHKENSCRYLLSWQ*CCSRKR Trigger: GCGCTTTCTACTGCAGCACCACTGCCAAGAAAGCAG...GTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR GCA 90 bp | AGCCATCTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACAAAAATGCTCAAAGATaGTGGGCGTGGTGGTGCACG | + |
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Preference number: 2 (lower is better) Translates to: SHLVGSNQCSHKENSCRYKNAQR*WAWWCT Trigger: CGTGCACCACCACGCCCAGCATCTTTGAGCATTTTT...GTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGTTTGTCACAAAGAGATGTTTGCTATTGTCCCTGCCTGTGGCTTCTGATGGTGAACCCCGTCTTTaGAAAGTGTTACTGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: QRFVTKRCLLLSLPVASDGEPRL*KVLLSF Trigger: AAAGGACAGTAACACTTTTCAAAGACGGGGTTCACC...ATCAGAAGCCACAGGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCAAAGGCAGAAATAACCTaGAAGCAATCTTGGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: VKILKSWKQRGPFASLLAKAEIT*KQSWLL Trigger: CAGTAACCAAGATTGCTTGCAGGTTATTTCTGCCTT...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCACAAGGACACTCTGTGAACGTCTGGCTGTCTCCTTCCTTTCCATTCCTTCTGGAAGATTCTCATaGATGCTTTCTTCTAAATGT | + |
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Preference number: 2 (lower is better) Translates to: TSTRTLCERLAVSFLSIPSGRFS*MLSSKC Trigger: ACATTTAGAAGAAAGCATCCATGAGAATCTTCCAGA...AGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAATTCTAAACCTGCATAGACTCATGTTTTCCCAAGTCTTAGACAATCCATCTGGAGCCATCTGGTaGGAAGCAACCAATGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PRILNLHRLMFSQVLDNPSGAIW*EATNVH Trigger: GTGAACATTGGTTGCTTCCCACCAGATGGCTCCAGA...TGGATTGTCTAAGACTTGGGAAAACATGAGTCTATGCAGGTTTAGAATTCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGAAGGCAGAAATAACCTaGAAGCAATCTTGGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: RKSDQSSWASAVGEDNRQKAEIT*KQSWLL Trigger: CAGTAACCAAGATTGCTTGCAGGTTATTTCTGCCTT...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAATTCTAAACCTGCATAGACTCATGTTTTCCCAAGTCTTAGACAATCCAGAGTGCTGTGCTGACTaGCCTCAGCCATTAATAAGT | + |
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Preference number: 2 (lower is better) Translates to: PRILNLHRLMFSQVLDNPECCAD*PQPLIS Trigger: ACTTATTAATGGCTGAGGGCAGTCAGCACAGCACTC...TGGATTGTCTAAGACTTGGGAAAACATGAGTCTATGCAGGTTTAGAATTCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR TCA 90 bp | TTAACCCTTTTCAGGAGACAGGATTTGTTGCCATTTTTCCTCCAGAATTTACCCCTTGATTCCTTTCCCTaGGATTGGGTTCACAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LTLFRRQDLLPFFLQNLPLDSFP*DWVHSL Trigger: CAAACTGTGAACCCAATCTCAGGGAAAGGAATCAAG...GGGTAAATTCTGGAGGAAAAATGGCAACAAATCCTGTCTCCTGAAAAGGGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR-3UTR GCA 90 bp | CTTTATTTATGCAGGTGCAAAATTGTAAGAATTCAAATGAGTTCAGGGCCACGGACCCACGAACTCTGGTaGTCTCTTAATTCTGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LYLCRCKIVRIQMSSGPRTHELW*SLNSGL Trigger: CAAACCAGAATTAAGAGAGCACCAGAGTTCGTGGGT...CCGTGGCCCTGAACTCATTTGAATTCTTACAATTTTGCACCTGCATAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR CCA 90 bp | CTTTATTTATGCAGGTGCAAAATTGTAAGAATTCAAATGAGTTCAGGGCCACGGAAGATTTTGAAGAGCTaGAAGCAGAGGGGTCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: LYLCRCKIVRIQMSSGPRKILKS*KQRGPF Trigger: AAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTT...CCGTGGCCCTGAACTCATTTGAATTCTTACAATTTTGCACCTGCATAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGTTTGTCACAAAGAGATGTTTGCTATTGTCCCTGCCTGTGGCTTCTGATATAAGTTCTCCAAGATaGGCTTGTTTAGGTGTTGAA | + |
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Preference number: 2 (lower is better) Translates to: QRFVTKRCLLLSLPVASDISSPR*ACLGVE Trigger: TTCAACACCTAAACAAGCCCATCTTGGAGAACTTAT...ATCAGAAGCCACAGGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| 3UTR GCA 72 bp | CCTGAGTCTCCCTGTGCGGCAGGAAGCCGGAGGACATaGTGTAGCAACCTTACCCAGGCTTCACCTCCACAA | + |
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Preference number: 3 (lower is better) Translates to: PESPCAAGSRRT*CSNLTQASPPQ Trigger: TTGTGGAGGTGAAGCCTGGGTAAGGTTGCTACAGCATGTCCTCCGGCTTCCTGCCGCACAGGGAGACTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR TCA 72 bp | GGACCCTCCATGAAGTTGGCTCTAACTCGGGCCTGGTaGGGACCTATAGAAACCCACGAACTCTGGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: GPSMKLALTRAW*GPIETHELWCS Trigger: AGAGCACCAGAGTTCGTGGGTTTCTATAGGTCCTCACCAGGCCCGAGTTAGAGCCAACTTCATGGAGGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| 3UTR GCA 72 bp | AGGACTCCACTGTGGCCTCAGGGATTCCAGCAGGACTaGAGGGCAGATGTGAACGTCGGATTTCTATTGACG | + |
|
Preference number: 3 (lower is better) Translates to: RTPLWPQGFQQD*RADVNVGFLLT Trigger: CGTCAATAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCACAGTGGAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR GCA 72 bp | ATCGCATATGCAATGCTGCTTTCTTGGCAGTGGTGCTaGAGTAGAAAGCGCGACCTCACACTGGCTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IAYAMLLSWQWC*SRKRDLTLAGQ Trigger: CTGCCCAGCCAGTGTGAGGTCGCGCTTTCTACTGCAGCACCACTGCCAAGAAAGCAGCATTGCATATGCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| 3UTR GCA 72 bp | CAGATCGCATATGCAATGCTGCTTTCTTGGCAGTGGTaGTGCAGTAGAAAGCGCGACCTCACACTGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QIAYAMLLSWQW*CSRKRDLTLAG Trigger: CCCAGCCAGTGTGAGGTCGCGCTTTCTACTGCAGCACCACTGCCAAGAAAGCAGCATTGCATATGCGATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| 3UTR CCA 72 bp | CAGGCTTCACCTCCACAAGGACACTCTGTGAACGTCTaGCTGTCTCCTTCCTTTCCATTCCTACCAGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QASPPQGHSVNV*LSPSFPFLPGG Trigger: ACCACCTGGTAGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGTGAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR TCA 72 bp | GACAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTaGCACCTGTACACCATTACACTTCGGAGAACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: DRATLEESRVTR*HLYTITLRRTG Trigger: GCCTGTTCTCCGAAGTGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR TCA 72 bp | ACCTTACCCAGGCTTCACCTCCACAAGGACACTCTGTaGACGTCTGGCTGTCTCCTTCCTTTCCATTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TLPRLHLHKDTL*TSGCLLPFHSY Trigger: GTAGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGTGAAGCCTGGGTAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR GCA 72 bp | CCTACACAGAACTATTTCTCGCAAGCACACAGACAGTaGTTCCGTCCCCCAGGCTTCCTAGAAACGGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PTQNYFSQAHRQ*FRPPGFLETVF Trigger: AAAGACCGTTTCTAGGAAGCCTGGGGGACGGAAGCACTGTCTGTGTGCTTGCGAGAAATAGTTCTGTGTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR GCA 72 bp | TTAACATTCAGGTCGCCCCTCAGATCGCATATGCAATaGTGCTTTCTTGGCAGTGGTGCTGCAGTAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTFRSPLRSHMQ*CFLGSGAAVES Trigger: GCTTTCTACTGCAGCACCACTGCCAAGAAAGCAGCATTGCATATGCGATCTGAGGGGCGACCTGAATGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCCTCCTACACAGAACTATTTCTCGCAAGCACACAGACAGTGCTTCCGTCCCCTAGAAACGGTCTTTaGATTTACTGTTCAACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPSYTELFLASTQTVLPSPRNGL*IYCSTQ Trigger: CTGAGTTGAACAGTAAATCAAAAGACCGTTTCTAGG...GGACGGAAGCACTGTCTGTGTGCTTGCGAGAAATAGTTCTGTGTAGGAGGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCCACAAGGACACTCTGTGAACGTCTGGCTGTCTCCTTCCTTTCCATTCCTAACCTGCAAGCAATCTaGGTTACTGAAAACAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: TSTRTLCERLAVSFLSIPNLQAI*VTENRT Trigger: AGTTCTGTTTTCAGTAACCAAGATTGCTTGCAGGTT...AGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR CCA 72 bp | ACAAAGCCCAAAGATACGCTGATAAGTTCTCCAAGATaGGCTTGTTTAGGTGTTGAAGGGAAAGGCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TKPKDTLISSPR*ACLGVEGKGSA Trigger: TGCTGAGCCTTTCCCTTCAACACCTAAACAAGCCCATCTTGGAGAACTTATCAGCGTATCTTTGGGCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCACCTAGAAACGGTCTTTaGATTTACTGTTCAACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VKILKSWKQRGPFASLLAPRNGL*IYCSTQ Trigger: CTGAGTTGAACAGTAAATCAAAAGACCGTTTCTAGG...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR TCA 72 bp | GCTGATAAGTTCTCCAAGATGGGCTTGTTTAGGTGTTaGAGGGAAAGGCTCAGCAACTTTTATTTACGCACT | + |
|
Preference number: 3 (lower is better) Translates to: ADKFSKMGLFRC*RERLSNFYLRT Trigger: AGTGCGTAAATAAAAGTTGCTGAGCCTTTCCCTTCAACACCTAAACAAGCCCATCTTGGAGAACTTATCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| 3UTR TCA 72 bp | AAAGAGATGTTTGCTATTGTCCCTGCCTGTGGCTTCTaGTCTGTAGTTCAGAATATGGACTGCTCATCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KEMFAIVPACGF*SVVQNMDCSSN Trigger: ATTGGATGAGCAGTCCATATTCTGAACTACAGATCAGAAGCCACAGGCAGGGACAATAGCAAACATCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| 3UTR GCA 72 bp | AAACCCACGAACTCTGGTGCTCTCTTAATTCTGGTTTaGCAAGAAGGTAAAGATTTTGAAGAGCTGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KPTNSGALLILV*QEGKDFEELEA Trigger: TGCTTCCAGCTCTTCAAAATCTTTACCTTCTTGGCAAACCAGAATTAAGAGAGCACCAGAGTTCGTGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR GCA 72 bp | AAAGGTTTGTCACAAAGAGATGTTTGCTATTGTCCCTaGCTGTGGCTTCTGATCTGTAGTTCAGAATATGGA | + |
|
Preference number: 3 (lower is better) Translates to: KGLSQRDVCYCP*LWLLICSSEYG Trigger: TCCATATTCTGAACTACAGATCAGAAGCCACAGGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| 3UTR CCA 72 bp | CTGAAAGTGCATATACTTACTTCTGGAGCCATCTGGTaGGAAGCAACCAATGTTCACATAAAGAAAACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LKVHILTSGAIW*EATNVHIKKTL Trigger: AAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCTCCAGAAGTAAGTATATGCACTTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| 3UTR CCA 72 bp | ATTCTGAAAGTGCATATACTTACTTCTGGAGCCATCTaGTGGGAAGCAACCAATGTTCACATAAAGAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: ILKVHILTSGAI*WEATNVHIKKT Trigger: AGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCTCCAGAAGTAAGTATATGCACTTTCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | CACTCGGGAGGGAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACTGCCTCCGCCGCCGCTaGCGCCGCTCGGGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSGGRGRWISEFEASLVYCLRRR*RRSGSS Trigger: TGAGCTACCCGAGCGGCGGCAGCGGCGGCGGAGGCA...GTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTCCCTCCCGAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACTGCCTCCGCCGCCGCTaGCGCCGCTCGGGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSYFRRVPGHQVTPVHHYCLRRR*RRSGSS Trigger: TGAGCTACCCGAGCGGCGGCAGCGGCGGCGGAGGCA...GTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196894.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGGTGGCGGGCGCGCTGTaGAGCCCGCGCCTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSDQSSWASAVGEDNRQVAGAL*SPRLHR Trigger: GCGATGGAGGCGCGGGCTTCACAGCGCGCCCGCCAC...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196894.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTCAGAGCACCTCTGAGCTCTGCCTTCCCCCTAGACACCGACCTGGTTTATCAGAGAGCGAAGGCTaGCCCTGTTCCTCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGQSTSELCLPPRHRPGLSESEG*PCSSAG Trigger: CCCTGCAGAGGAACAGGGTCAGCCTTCGCTCTCTGA...TAAACCAGGTCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCTCTGACCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CCA 90 bp | ATCGCATATGCAATGCTGCTTTCTTGGCAGTGGTGCTGCAGTAGAAAGCGCGACTCCAGCTCAGCAGACTaGCGGCCTCGCTCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IAYAMLLSWQWCCSRKRDSSSAD*RPRSAW Trigger: CCAGGCTGAGCGAGGCCGCCAGTCTGCTGAGCTGGA...GTCGCGCTTTCTACTGCAGCACCACTGCCAAGAAAGCAGCATTGCATATGCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGGCCAGTTCCATCTCCTaGCTCATGCTGATCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRWISEFEASLVYKVASSIS*LMLICS Trigger: GCTGCAGATCAGCATGAGGCAGGAGATGGAACTGGC...CACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | AAGATGAGCAAAGGTCAGAGCACCTCTGAGCTCTGCCTTCCCCCTAGACACCGATGTGCTTCCCATCCATaGGCAGCTCTGGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KMSKGQSTSELCLPPRHRCASHP*AALASG Trigger: CCCAGAAGCCAGAGCTGCGCATGGATGGGAAGCACA...TCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCTCTGACCTTTGCTCATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CCA 90 bp | ATCGCATATGCAATGCTGCTTTCTTGGCAGTGGTGCTGCAGTAGAAAGCGCGACCGGCCTCGCTCAGCCTaGCGCAATCTTTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IAYAMLLSWQWCCSRKRDRPRSA*RNLCSS Trigger: GCTGGAGCAAAGATTGCGCCAGGCTGAGCGAGGCCG...GTCGCGCTTTCTACTGCAGCACCACTGCCAAGAAAGCAGCATTGCATATGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACAACCAAGTGGCGGGCGCGCTGTaGAGCCCGCGCCTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LVGSNQCSHKENSCRYNQVAGAL*SPRLHR Trigger: GCGATGGAGGCGCGGGCTTCACAGCGCGCCCGCCAC...TTGGTTGTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCAAATTGGGATGGTGCTTaGCTCCGCCGCCGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VKILKSWKQRGPFASLLANWDGA*LRRRCR Trigger: GCGGCAGCGGCGGCGGAGGCAAGCACCATCCCAATT...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196894.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGCAGCTGACACACCTGTaGCTTTTCAGAGAGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRWISEFEASLVYKVQLTHL*LFRERR Trigger: CCTTCGCTCTCTGAAAAGCCACAGGTGTGTCAGCTG...CACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGGTTGCATCTGTGGTCACTTAGAAAAGGCCCTGCTCGTATTGCTCGTGCCATGGCAGCCTGTGTaGTCTTGTCAGTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGCICGHLEKALLVLLVPWQPV*SCQWWG Trigger: CCCCCACCACTGACAAGATCACACAGGCTGCCATGG...CACGAGCAATACGAGCAGGGCCTTTTCTAAGTGACCACAGATGCAACCCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031229.11 |
||
| CDS-3UTR GCA 90 bp | AAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACACTTCGGAGAACAGTGCCTCATGCTGATCTaGAGCTCCAGCTCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSPGSPGDTCTPLHFGEQCLMLI*SSSSFS Trigger: CGAGAAGGAGCTGGAGCTGCAGATCAGCATGAGGCA...CTGTTCTCCGAAGTGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACACTTCGGAGAACAGGCCAGTTCCATCTCCTaGCTCATGCTGATCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSPGSPGDTCTPLHFGEQASSIS*LMLICS Trigger: GCTGCAGATCAGCATGAGGCAGGAGATGGAACTGGC...CTGTTCTCCGAAGTGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACGTCAGTGGTGGGGGTTaGCATATCAGTCGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QSYFRRVPGHQVTPVHHYVSGGG*HISRRR Trigger: ACGCCTCCGACTGATATGCCAACCCCCACCACTGAC...GTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031229.11 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTTTGTCACAAAGAGATGTTTGCTATTGTCCCTGCCTGTGGCTTCTGATGAGTCCGCTGCCTGGTaGGCGCCTCCACTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRFVTKRCLLLSLPVASDESAAW*APPLPA Trigger: AGCTGGAAGTGGAGGCGCTCACCAGGCAGCGGACTC...ATCAGAAGCCACAGGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTACAGCGCTTGCCCTTCTaGAGTTCTGTCTTGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPQGFQQDCRADVNVGFLQRLPF*SSVLFR Trigger: CCTAAACAAGACAGAACTGCAGAAGGGCAAGCGCTG...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | AAAGGTCAGAGCACCTCTGAGCTCTGCCTTCCCCCTAGACACCGACCTGGTTTACAGCGCTTGCCCTTCTaGAGTTCTGTCTTGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGQSTSELCLPPRHRPGLQRLPF*SSVLFR Trigger: CCTAAACAAGACAGAACTGCAGAAGGGCAAGCGCTG...TAAACCAGGTCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCTCTGACCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | ACCTCCACAAGGACACTCTGTGAACGTCTGGCTGTCTCCTTCCTTTCCATTCCTGCTTCGCTCAGCGCTTaGCCTTCTGCAGTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTRTLCERLAVSFLSIPASLSA*PSAVLS Trigger: AGACAGAACTGCAGAAGGGCAAGCGCTGAGCGAAGC...AGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACGCCAGTTCCATCTCCTaGCTCATGCTGATCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSYFRRVPGHQVTPVHHYASSIS*LMLICS Trigger: GCTGCAGATCAGCATGAGGCAGGAGATGGAACTGGC...GTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | AAAGGTCAGAGCACCTCTGAGCTCTGCCTTCCCCCTAGACACCGACCTGGTTTAGCCTGGCGCAATCTTTaGTCCAGCTGTTTAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGQSTSELCLPPRHRPGLAWRNL*SSCLMV Trigger: CACCATTAAACAGCTGGAGCAAAGATTGCGCCAGGC...TAAACCAGGTCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCTCTGACCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR TCA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTAATGGTGGCAGCCATCTaGTTGGTCTTTTCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WPQGFQQDCRADVNVGFLMVAAI*LVFSSK Trigger: CTTGGAAGAAAAGACCAATCAGATGGCTGCCACCAT...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACACTTCGGAGAACAGCAGCGCTTGCCCTTCTaGAGTTCTGTCTTGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSPGSPGDTCTPLHFGEQQRLPF*SSVLFR Trigger: CCTAAACAAGACAGAACTGCAGAAGGGCAAGCGCTG...CTGTTCTCCGAAGTGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR TCA 90 bp | ATCGCATATGCAATGCTGCTTTCTTGGCAGTGGTGCTGCAGTAGAAAGCGCGACCCAGCTGCAGACTGTTaGTCTTGTCTCCAAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IAYAMLLSWQWCCSRKRDPAADC*SCLQSP Trigger: AGGACTTTGGAGACAAGATCAACAGTCTGCAGCTGG...GTCGCGCTTTCTACTGCAGCACCACTGCCAAGAAAGCAGCATTGCATATGCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCAGCTTCGCTCAGCGCTTaGCCTTCTGCAGTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKILKSWKQRGPFASLLAASLSA*PSAVLS Trigger: AGACAGAACTGCAGAAGGGCAAGCGCTGAGCGAAGC...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | GATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGGACTCCACTGTCTCCTCCTTTAGATaGTTTCTGGCTTCGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DQSSWASAVGEDNRQDSTVSSFR*FLASLS Trigger: GCTGAGCGAAGCCAGAAAGCATCTAAAGGAGGAGAC...AGTGGAGTCCTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | ACCTCCACAAGGACACTCTGTGAACGTCTGGCTGTCTCCTTCCTTTCCATTCCTGTCTCCTCCTTTAGATaGTTTCTGGCTTCGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTRTLCERLAVSFLSIPVSSFR*FLASLS Trigger: GCTGAGCGAAGCCAGAAAGCATCTAAAGGAGGAGAC...AGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | CCCAGAATTCTAAACCTGCATAGACTCATGTTTTCCCAAGTCTTAGACAATCCAAATTGGGATGGTGCTTaGCTCCGCCGCCGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRILNLHRLMFSQVLDNPNWDGA*LRRRCR Trigger: GCGGCAGCGGCGGCGGAGGCAAGCACCATCCCAATT...TGGATTGTCTAAGACTTGGGAAAACATGAGTCTATGCAGGTTTAGAATTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CCA 90 bp | GGGCCCTTGGCTTGCTCTGTGGGAGGGATTCTGAAAGTGCATATACTTACTTCTTCTTCCTCTGCCAACTaGTGTCTTGAGTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLACSVGGILKVHILTSSSSAN*CLESWE Trigger: CTCCCAGGACTCAAGACACCAGTTGGCAGAGGAAGA...AGAAGTAAGTATATGCACTTTCAGAATCCCTCCCACAGAGCAAGCCAAGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTACTTGATGCTCAGCTTTaGCATGTTCATCAGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WPQGFQQDCRADVNVGFLLDAQL*HVHQVH Trigger: ATGAACCTGATGAACATGGCAAAGCTGAGCATCAAG...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTATCAGAAAGCTTCTTTTaGATCAATGCCAACCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPQGFQQDCRADVNVGFLSESFF*INANRS Trigger: GCTTCGGTTGGCATTGATGCAAAAGAAGCTTTCTGA...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACCCTAGGTCTGAACTCTaGAGTTTAAAGGCGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSYFRRVPGHQVTPVHHYPRSEL*SLKASS Trigger: TGAGCTCGCCTTTAAACTGCAGAGTTCAGACCTAGG...GTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTCCTACACAGAACTATTTCTCGCAAGCACACAGACAGTGCTTCCGTCCTATTTCTGCAGCTTCTaGAACAAGCTTCTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPSYTELFLASTQTVLPSYFCSF*NKLLHQ Trigger: CTGGTGGAGAAGCTTGTTCCAGAAGCTGCAGAAATA...GGACGGAAGCACTGTCTGTGTGCTTGCGAGAAATAGTTCTGTGTAGGAGGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACACTTCGGAGAACAGTATTTCTGCAGCTTCTaGAACAAGCTTCTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPGSPGDTCTPLHFGEQYFCSF*NKLLHQ Trigger: CTGGTGGAGAAGCTTGTTCCAGAAGCTGCAGAAATA...CTGTTCTCCGAAGTGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGGTTGCATCTGTGGTCACTTAGAAAAGGCCCTGCTCGTATTGCTCGTGTCTATAACTCCAACCTaGGAGTCCAGGTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKGCICGHLEKALLVLLVSITPT*ESRSSP Trigger: AGGAGAAGACCTGGACTCTCAGGTTGGAGTTATAGA...CACGAGCAATACGAGCAGGGCCTTTTCTAAGTGACCACAGATGCAACCCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR TCA 90 bp | GGGCCCTTGGCTTGCTCTGTGGGAGGGATTCTGAAAGTGCATATACTTACTTCTTCTATAACTCCAACCTaGGAGTCCAGGTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLACSVGGILKVHILTSSITPT*ESRSSP Trigger: AGGAGAAGACCTGGACTCTCAGGTTGGAGTTATAGA...AGAAGTAAGTATATGCACTTTCAGAATCCCTCCCACAGAGCAAGCCAAGGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CCA 90 bp | ATCGCATATGCAATGCTGCTTTCTTGGCAGTGGTGCTGCAGTAGAAAGCGCGACTATTTCTGCAGCTTCTaGAACAAGCTTCTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IAYAMLLSWQWCCSRKRDYFCSF*NKLLHQ Trigger: CTGGTGGAGAAGCTTGTTCCAGAAGCTGCAGAAATA...GTCGCGCTTTCTACTGCAGCACCACTGCCAAGAAAGCAGCATTGCATATGCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGTCTTCCTCTGCCAACTaGTGTCTTGAGTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKSDQSSWASAVGEDNRQSSSAN*CLESWE Trigger: CTCCCAGGACTCAAGACACCAGTTGGCAGAGGAAGA...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTACCCCCACTTTTCCGCAAAGGTTTGTCACAAAGAGATGTTTGCTATTTGTTCCTCTGCAGGGTaGGTCAGAAGCCTGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVYPHFSAKVCHKEMFAICSSAG*VRSLWL Trigger: AAGCCACAGGCTTCTGACTCACCCTGCAGAGGAACA...AATAGCAAACATCTCTTTGTGACAAACCTTTGCGGAAAAGTGGGGGTACACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACACTCGCTGTTATTTCTaGAGCTTCTGGAACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSYFRRVPGHQVTPVHHYTRCYF*SFWNKL Trigger: AAGCTTGTTCCAGAAGCTGCAGAAATAACAGCGAGT...GTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | AGCCATCTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACGCTTCGCTCAGCGCTTaGCCTTCTGCAGTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLVGSNQCSHKENSCRYASLSA*PSAVLS Trigger: AGACAGAACTGCAGAAGGGCAAGCGCTGAGCGAAGC...GTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CCA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCAATTTGCAAAGGTAGATaGTCTCCATGGCAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKILKSWKQRGPFASLLAICKGR*SPWQPV Trigger: CACAGGCTGCCATGGAGACCATCTACCTTTGCAAAT...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031229.11 |
||
| CDS-3UTR CCA 90 bp | AAGATGAGCAAAGGTCAGAGCACCTCTGAGCTCTGCCTTCCCCCTAGACACCGACAAGAAAAGTTTTCTTaGCTTTCAAGCCGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KMSKGQSTSELCLPPRHRQEKFS*LSSRVS Trigger: TGAAACACGGCTTGAAAGCCAAGAAAACTTTTCTTG...TCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCTCTGACCTTTGCTCATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGTCTATAACTCCAACCTaGGAGTCCAGGTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKSDQSSWASAVGEDNRQSITPT*ESRSSP Trigger: AGGAGAAGACCTGGACTCTCAGGTTGGAGTTATAGA...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR TCA 90 bp | CCCAGAATTCTAAACCTGCATAGACTCATGTTTTCCCAAGTCTTAGACAATCCAACACTCGCTCAGGCTTaGTGCTTGACGGAAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRILNLHRLMFSQVLDNPTLAQA*CLTEEA Trigger: TGCCTCTTCCGTCAAGCATCAAGCCTGAGCGAGTGT...TGGATTGTCTAAGACTTGGGAAAACATGAGTCTATGCAGGTTTAGAATTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | TTAACCCTTTTCAGGAGACAGGATTTGTTGCCATTTTTCCTCCAGAATTTACCCTGCCTCATGCTGATCTaGAGCTCCAGCTCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTLFRRQDLLPFFLQNLPCLMLI*SSSSFS Trigger: CGAGAAGGAGCTGGAGCTGCAGATCAGCATGAGGCA...GGGTAAATTCTGGAGGAAAAATGGCAACAAATCCTGTCTCCTGAAAAGGGTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | AGCCATCTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACTCCTCTTGGATTCTGTaGTTCCCATCCATGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLVGSNQCSHKENSCRYSSWIL*FPSMRS Trigger: GCTGCGCATGGATGGGAAGCACAGAATCCAAGAGGA...GTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR TCA 90 bp | TTAACCCTTTTCAGGAGACAGGATTTGTTGCCATTTTTCCTCCAGAATTTACCCTCTTCCTGGCACAGCTaGCACACCTGTGGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLFRRQDLLPFFLQNLPSSWHS*HTCGFS Trigger: TGAAAAGCCACAGGTGTGTCAGCTGTGCCAGGAAGA...GGGTAAATTCTGGAGGAAAAATGGCAACAAATCCTGTCTCCTGAAAAGGGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR TCA 90 bp | AGCCATCTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACTTTATCAGCTGCTCGTaGCAAGGATTGCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLVGSNQCSHKENSCRYFISCS*QGLHTR Trigger: GCGAGTGTGCAATCCTTGTCACGAGCAGCTGATAAA...GTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCACTTGATGCTCAGCTTTaGCATGTTCATCAGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKILKSWKQRGPFASLLALDAQL*HVHQVH Trigger: ATGAACCTGATGAACATGGCAAAGCTGAGCATCAAG...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCAACTCGCTGTTATTTCTaGAGCTTCTGGAACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKILKSWKQRGPFASLLATRCYF*SFWNKL Trigger: AAGCTTGTTCCAGAAGCTGCAGAAATAACAGCGAGT...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | CCCCACTTTTCCGCAAAGGTTTGTCACAAAGAGATGTTTGCTATTGTCCCTGCCTCAGAAAGCTTCTTTTaGATCAATGCCAACCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHFSAKVCHKEMFAIVPASESFF*INANRS Trigger: GCTTCGGTTGGCATTGATGCAAAAGAAGCTTTCTGA...GGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTTGCGGAAAAGTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | AGCCATCTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACGTCTCCTCCTTTAGATaGTTTCTGGCTTCGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLVGSNQCSHKENSCRYVSSFR*FLASLS Trigger: GCTGAGCGAAGCCAGAAAGCATCTAAAGGAGGAGAC...GTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTATGCAGGTGCAAAATTGTAAGAATTCAAATGAGTTCAGGGCCACGGTGCCTCATGCTGATCTaGAGCTCCAGCTCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LYLCRCKIVRIQMSSGPRCLMLI*SSSSFS Trigger: CGAGAAGGAGCTGGAGCTGCAGATCAGCATGAGGCA...CCGTGGCCCTGAACTCATTTGAATTCTTACAATTTTGCACCTGCATAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACCAAGAAAAGTTTTCTTaGCTTTCAAGCCGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSYFRRVPGHQVTPVHHYQEKFS*LSSRVS Trigger: TGAAACACGGCTTGAAAGCCAAGAAAACTTTTCTTG...GTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGTCAGAAAGCTTCTTTTaGATCAATGCCAACCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSDQSSWASAVGEDNRQSESFF*INANRS Trigger: GCTTCGGTTGGCATTGATGCAAAAGAAGCTTTCTGA...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGTTGCATCTGTGGTCACTTAGAAAAGGCCCTGCTCGTATTGCTCGTGCAAGAAAAGTTTTCTTaGCTTTCAAGCCGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKGCICGHLEKALLVLLVQEKFS*LSSRVS Trigger: TGAAACACGGCTTGAAAGCCAAGAAAACTTTTCTTG...CACGAGCAATACGAGCAGGGCCTTTTCTAAGTGACCACAGATGCAACCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | CCCAGAATTCTAAACCTGCATAGACTCATGTTTTCCCAAGTCTTAGACAATCCACCTAGGTCTGAACTCTaGAGTTTAAAGGCGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRILNLHRLMFSQVLDNPPRSEL*SLKASS Trigger: TGAGCTCGCCTTTAAACTGCAGAGTTCAGACCTAGG...TGGATTGTCTAAGACTTGGGAAAACATGAGTCTATGCAGGTTTAGAATTCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTATGCAGGTGCAAAATTGTAAGAATTCAAATGAGTTCAGGGCCACGGCCTAGGTCTGAACTCTaGAGTTTAAAGGCGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLCRCKIVRIQMSSGPRPRSEL*SLKASS Trigger: TGAGCTCGCCTTTAAACTGCAGAGTTCAGACCTAGG...CCGTGGCCCTGAACTCATTTGAATTCTTACAATTTTGCACCTGCATAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| 3UTR CAA 72 bp | TGCATCTGTGGTCACTTAGAAAAGGCCCTGCTCGTATaGCTCGTGGCTATTGAGGATCTTTATTTTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: CICGHLEKALLV*LVAIEDLYFDI Trigger: AATATCAAAATAAAGATCCTCAATAGCCACGAGCAATACGAGCAGGGCCTTTTCTAAGTGACCACAGATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACAACCAACTTGATGCTCAGCTTTaGCATGTTCATCAGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVGSNQCSHKENSCRYNQLDAQL*HVHQVH Trigger: ATGAACCTGATGAACATGGCAAAGCTGAGCATCAAG...TTGGTTGTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACAACCAATACAGAAGGTTCCTCTaGAGTTTCTACACGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVGSNQCSHKENSCRYNQYRRFL*SFYTCS Trigger: AGAACACGTGTAGAAACTGCAGAGGAACCTTCTGTA...TTGGTTGTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGGGCTTCGCTCAGCGCTaGCCCTTCTGCAGTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGRGRWISEFEASLVYKVGFAQR*PFCSSV Trigger: GACAGAACTGCAGAAGGGCAAGCGCTGAGCGAAGCC...CACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTCCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACACTTCGGAGAACAGGGCTTCGCTCAGCGCTaGCCCTTCTGCAGTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSPGSPGDTCTPLHFGEQGFAQR*PFCSSV Trigger: GACAGAACTGCAGAAGGGCAAGCGCTGAGCGAAGCC...CTGTTCTCCGAAGTGTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR CAA 90 bp | CAGAGCTACTTTAGAAGAGTCCCGGGTCACCAGGTGACACCTGTACACCATTACTGTCAGTGGTGGGGGTaGGCATATCAGTCGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QSYFRRVPGHQVTPVHHYCQWWG*AYQSEA Trigger: CGCCTCCGACTGATATGCCAACCCCCACCACTGACA...GTAATGGTGTACAGGTGTCACCTGGTGACCCGGGACTCTTCTAAAGTAGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031229.11 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGCTGCCAACTGGTGTCTaGAGTCCTGGGAGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GGRGRWISEFEASLVYKVLPTGV*SPGRSF Trigger: AAAAGACCTCCCAGGACTCAAGACACCAGTTGGCAG...CACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CAA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTACTGCCAACTGGTGTCTaGAGTCCTGGGAGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: WPQGFQQDCRADVNVGFLLPTGV*SPGRSF Trigger: AAAAGACCTCCCAGGACTCAAGACACCAGTTGGCAG...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
||
| CDS-3UTR CAA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCAGCAGCCTGTGTGATCTaGTCAGTGGTGGGGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKILKSWKQRGPFASLLAAACVI*SVVGVG Trigger: GCCAACCCCCACCACTGACAAGATCACACAGGCTGC...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031229.11 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTTGGCTTGCTCTGTGGGAGGGATTCTGAAAGTGCATATACTTACTTCTCACACTCGCTCAGGCTaGATGCTTGACGGAAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPLACSVGGILKVHILTSHTRSG*MLDGRG Trigger: GCCTCTTCCGTCAAGCATCAAGCCTGAGCGAGTGTG...AGAAGTAAGTATATGCACTTTCAGAATCCCTCCCACAGAGCAAGCCAAGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS GCA 90 bp | TCACAGACATCCTTCTCCAGCATCTTCATAGCCAGTTCCATCTCCTaGCTCATGCTGATCTGCAGCTCCAGCTCCTTCTCGACATCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQTSFSSIFIASSIS*LMLICSSSSFSTSN Trigger: ATTGGATGTCGAGAAGGAGCTGGAGCTGCAGATCAGCATGAGGCAGGAGATGGAACTGGCTATGAAGATGCTGGAGAAGGATGTCTGTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031229.11 ENSMUST00000196686.2 ENSMUST00000196894.5 ENSMUST00000198965.5 ENSMUST00000199312.5 |
||
| CDS-3UTR CAA 90 bp | AAGATGAGCAAAGGTCAGAGCACCTCTGAGCTCTGCCTTCCCCCTAGACACCGACCAAGAAAAGTTTTCTaGGCTTTCAAGCCGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KMSKGQSTSELCLPPRHRPRKVF*AFKPCF Trigger: GAAACACGGCTTGAAAGCCAAGAAAACTTTTCTTGG...TCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCTCTGACCTTTGCTCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCAGAGCACCTCTGAGCTCTGCCTTCCCCCTAGACACCGACCTGGTTTACCTTTCATGCAGAAATaGGCATCGATGACATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGQSTSELCLPPRHRPGLPFMQK*ASMTFR Trigger: TCTGAATGTCATCGATGCCAATTTCTGCATGAAAGG...TAAACCAGGTCGGTGTCTAGGGGGAAGGCAGAGCTCAGAGGTGCTCTGACCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| CDS-3UTR CAA 90 bp | GATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGGACTCCACTCTCAGAAAGCTTCTTTaGCATCAATGCCAACCGAAG | + |
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Preference number: 5 (lower is better) Translates to: DQSSWASAVGEDNRQDSTLRKLL*HQCQPK Trigger: CTTCGGTTGGCATTGATGCAAAAGAAGCTTTCTGAG...AGTGGAGTCCTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTAAAGGTAATAATTCTGTaGTTGGCAACGGCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: WPQGFQQDCRADVNVGFLKVIIL*LATASS Trigger: AGAACTTGCCGTTGCCAACAACAGAATTATTACCTT...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | CTTTATTTATGCAGGTGCAAAATTGTAAGAATTCAAATGAGTTCAGGGCCACGGGGCTTCGCTCAGCGCTaGCCCTTCTGCAGTTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LYLCRCKIVRIQMSSGPRGFAQR*PFCSSV Trigger: GACAGAACTGCAGAAGGGCAAGCGCTGAGCGAAGCC...CCGTGGCCCTGAACTCATTTGAATTCTTACAATTTTGCACCTGCATAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTACAAATCTTTTTCACTTaGCTCCAGCTGTTTAATGGT | + |
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Preference number: 5 (lower is better) Translates to: WPQGFQQDCRADVNVGFLQIFFT*LQLFNG Trigger: ACCATTAAACAGCTGGAGCAAAGTGAAAAAGATTTG...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAGGGATTCCAGCAGGACTGCAGGGCAGATGTGAACGTCGGATTTCTACACTATTTAAGGTCTTaGCCTGTTTCACCAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: WPQGFQQDCRADVNVGFLHYLRS*PVSPNL Trigger: AAGATTTGGTGAAACAGGCAAAGACCTTAAATAGTG...TAGAAATCCGACGTTCACATCTGCCCTGCAGTCCTGCTGGAATCCCTGAGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | AGAAAGGGTTGCATCTGTGGTCACTTAGAAAAGGCCCTGCTCGTATTGCTCGTGCCAAGAAAAGTTTTCTaGGCTTTCAAGCCGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: RKGCICGHLEKALLVLLVPRKVF*AFKPCF Trigger: GAAACACGGCTTGAAAGCCAAGAAAACTTTTCTTGG...CACGAGCAATACGAGCAGGGCCTTTTCTAAGTGACCACAGATGCAACCCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | GATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGGACTCCACTAAGGTAATAATTCTGTaGTTGGCAACGGCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: DQSSWASAVGEDNRQDSTKVIIL*LATASS Trigger: AGAACTTGCCGTTGCCAACAACAGAATTATTACCTT...AGTGGAGTCCTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | GTAAAGATTTTGAAGAGCTGGAAGCAGAGGGGTCCCTTTGCCTCTCTCTTAGCATTCTGCAGTTCTGTCTaGTTTAGGACCCTTCCGATT | + |
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Preference number: 5 (lower is better) Translates to: VKILKSWKQRGPFASLLAFCSSV*FRTLPI Trigger: AATCGGAAGGGTCCTAAACAAGACAGAACTGCAGAA...TGCTAAGAGAGAGGCAAAGGGACCCCTCTGCTTCCAGCTCTTCAAAATCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGCTCAGAAAGCTTCTTTaGCATCAATGCCAACCGAAG | + |
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Preference number: 5 (lower is better) Translates to: RKSDQSSWASAVGEDNRQLRKLL*HQCQPK Trigger: CTTCGGTTGGCATTGATGCAAAAGAAGCTTTCTGAG...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGTTCTGCAGTTCTGTCTaGTTTAGGACCCTTCCGATT | + |
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Preference number: 5 (lower is better) Translates to: RKSDQSSWASAVGEDNRQFCSSV*FRTLPI Trigger: AATCGGAAGGGTCCTAAACAAGACAGAACTGCAGAA...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | GATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGGACTCCACTCAAATCTTTTTCACTTaGCTCCAGCTGTTTAATGGT | + |
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Preference number: 5 (lower is better) Translates to: DQSSWASAVGEDNRQDSTQIFFT*LQLFNG Trigger: ACCATTAAACAGCTGGAGCAAAGTGAAAAAGATTTG...AGTGGAGTCCTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | ACCTCCACAAGGACACTCTGTGAACGTCTGGCTGTCTCCTTCCTTTCCATTCCTCACTATTTAAGGTCTTaGCCTGTTTCACCAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: TSTRTLCERLAVSFLSIPHYLRS*PVSPNL Trigger: AAGATTTGGTGAAACAGGCAAAGACCTTAAATAGTG...AGGAATGGAAAGGAAGGAGACAGCCAGACGTTCACAGAGTGTCCTTGTGGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | AGCCATCTGGTGGGAAGCAACCAATGTTCACATAAAGAAAACTCTTGTAGGTACTCCAGCTGCAGACTGTaGATCTTGTCTCCAAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SHLVGSNQCSHKENSCRYSSCRL*ILSPKS Trigger: GGACTTTGGAGACAAGATCAACAGTCTGCAGCTGGA...GTACCTACAAGAGTTTTCTTTATGTGAACATTGGTTGCTTCCCACCAGATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| CDS-3UTR CAA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGCCAAGAAAAGTTTTCTaGGCTTTCAAGCCGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: RKSDQSSWASAVGEDNRQPRKVF*AFKPCF Trigger: GAAACACGGCTTGAAAGCCAAGAAAACTTTTCTTGG...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | CTTTATTTATGCAGGTGCAAAATTGTAAGAATTCAAATGAGTTCAGGGCCACGGCTGCCAACTGGTGTCTaGAGTCCTGGGAGGTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LYLCRCKIVRIQMSSGPRLPTGV*SPGRSF Trigger: AAAAGACCTCCCAGGACTCAAGACACCAGTTGGCAG...CCGTGGCCCTGAACTCATTTGAATTCTTACAATTTTGCACCTGCATAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | AGAAAAAGTGATCAAAGCTCTTGGGCAAGTGCTGTAGGTGAAGACAACAGGCAGCCTTTCATGCAGAAATaGGCATCGATGACATTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RKSDQSSWASAVGEDNRQPFMQK*ASMTFR Trigger: TCTGAATGTCATCGATGCCAATTTCTGCATGAAAGG...CTGCCTGTTGTCTTCACCTACAGCACTTGCCCAAGAGCTTTGATCACTTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | CAAAGGTTTGTCACAAAGAGATGTTTGCTATTGTCCCTGCCTGTGGCTTCTGATTTCTGCAGTTCTGTCTaGTTTAGGACCCTTCCGATT | + |
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Preference number: 5 (lower is better) Translates to: QRFVTKRCLLLSLPVASDFCSSV*FRTLPI Trigger: AATCGGAAGGGTCCTAAACAAGACAGAACTGCAGAA...ATCAGAAGCCACAGGCAGGGACAATAGCAAACATCTCTTTGTGACAAACCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| CDS-3UTR CAA 90 bp | AGAAAGGGTTGCATCTGTGGTCACTTAGAAAAGGCCCTGCTCGTATTGCTCGTGTTGGGATCAGTTTATTaGCTGCACTATTTAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RKGCICGHLEKALLVLLVLGSVY*LHYLRS Trigger: AGACCTTAAATAGTGCAGCAAATAAACTGATCCCAA...CACGAGCAATACGAGCAGGGCCTTTTCTAAGTGACCACAGATGCAACCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS-3UTR CAA 90 bp | TTAACCCTTTTCAGGAGACAGGATTTGTTGCCATTTTTCCTCCAGAATTTACCCCTCAGAAAGCTTCTTTaGCATCAATGCCAACCGAAG | + |
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Preference number: 5 (lower is better) Translates to: LTLFRRQDLLPFFLQNLPLRKLL*HQCQPK Trigger: CTTCGGTTGGCATTGATGCAAAAGAAGCTTTCTGAG...GGGTAAATTCTGGAGGAAAAATGGCAACAAATCCTGTCTCCTGAAAAGGGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| CDS-3UTR CAA 90 bp | TCAGTGTACCCCCACTTTTCCGCAAAGGTTTGTCACAAAGAGATGTTTGCTATTAAGGTAATAATTCTGTaGTTGGCAACGGCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SVYPHFSAKVCHKEMFAIKVIIL*LATASS Trigger: AGAACTTGCCGTTGCCAACAACAGAATTATTACCTT...AATAGCAAACATCTCTTTGTGACAAACCTTTGCGGAAAAGTGGGGGTACACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| CDS-3UTR CAA 90 bp | CTTTATTTATGCAGGTGCAAAATTGTAAGAATTCAAATGAGTTCAGGGCCACGGCCTTTCATGCAGAAATaGGCATCGATGACATTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LYLCRCKIVRIQMSSGPRPFMQK*ASMTFR Trigger: TCTGAATGTCATCGATGCCAATTTCTGCATGAAAGG...CCGTGGCCCTGAACTCATTTGAATTCTTACAATTTTGCACCTGCATAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031229.11 ENSMUST00000196894.5 |
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| CDS CCA 72 bp | TTGTCCAGCTCAGCAGACTGGCGGCCTCGCTCAGCCTaGCGCAATCTTTGCTCCAGCTGTTTAATGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSSSADWRPRSA*RNLCSSCLMVA Trigger: TGCCACCATTAAACAGCTGGAGCAAAGATTGCGCCAGGCTGAGCGAGGCCGCCAGTCTGCTGAGCTGGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| CDS CCA 72 bp | TGTCAAATCCTCCCAAGAGTCTTCATGGGTCGGCTCTaGGTCGGGTGTAAGGGAGATGTCATCCAGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: CQILPRVFMGRL*VGCKGDVIQLP Trigger: CGGGAGCTGGATGACATCTCCCTTACACCCGACCCAGAGCCGACCCATGAAGACTCTTGGGAGGATTTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196686.2 ENSMUST00000199312.5 |
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| CDS GCA 72 bp | TGGCTTTTCAGAGAGCGAAGGCTGACCCTGTTCCTCTaGAGGGTGAGTCAGAAGCCTGTGGCTTTCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: WLFRERRLTLFL*RVSQKPVAFFQ Trigger: CTGGAAGAAAGCCACAGGCTTCTGACTCACCCTGCAGAGGAACAGGGTCAGCCTTCGCTCTCTGAAAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| CDS CCA 72 bp | AGCCATGAGATAATTGGGATCTTCATGGGTCGGCTCTaGGTCGGGTGTAAGGGAGATGTCATCCAGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SHEIIGIFMGRL*VGCKGDVIQLP Trigger: CGGGAGCTGGATGACATCTCCCTTACACCCGACCCAGAGCCGACCCATGAAGATCCCAATTATCTCATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031229.11 |
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| CDS TCA 72 bp | GGTGGGCTGCTGGAGTACTGCTTTATCAGCTGCTCGTaGCAAGGATTGCACACTCGCTCAGGCTTGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: GGLLEYCFISCS*QGLHTRSGLML Trigger: AAGCATCAAGCCTGAGCGAGTGTGCAATCCTTGTCACGAGCAGCTGATAAAGCAGTACTCCAGCAGCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198965.5 |
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| CDS CAA 90 bp | GAGTCCAGGGTCCGCCCCAGATTCAGAGCCGATTCAATCAAGCCCTaGATGCTCAGCTTTGCCATGTTCATCAGGTTCATGCGTTCGTTA | + |
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Preference number: 6 (lower is better) Translates to: ESRVRPRFRADSIKP*MLSFAMFIRFMRSL Trigger: TAACGAACGCATGAACCTGATGAACATGGCAAAGCTGAGCATCAAGGGCTTGATTGAATCGGCTCTGAATCTGGGGCGGACCCTGGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031229.11 ENSMUST00000196686.2 ENSMUST00000196894.5 ENSMUST00000198965.5 ENSMUST00000199312.5 |
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| CDS GCA 72 bp | TCGACATCCAATCTTAACTGTGTCTCCTCCTTTAGATaGTTTCTGGCTTCGCTCAGCGCTTGCCCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: STSNLNCVSSFR*FLASLSACPSA Trigger: TGCAGAAGGGCAAGCGCTGAGCGAAGCCAGAAAGCATCTAAAGGAGGAGACACAGTTAAGATTGGATGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031229.11 ENSMUST00000196686.2 ENSMUST00000196894.5 ENSMUST00000198965.5 ENSMUST00000199312.5 |
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| CDS CAA 72 bp | TTGGGATCAGTTTATTTGCTGCACTATTTAAGGTCTTaGCCTGTTTCACCAAATCTTTTTCACTTTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGSVYLLHYLRS*PVSPNLFHFAP Trigger: TGGAGCAAAGTGAAAAAGATTTGGTGAAACAGGCAAAGACCTTAAATAGTGCAGCAAATAAACTGATCCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031229.11 ENSMUST00000196686.2 ENSMUST00000196894.5 ENSMUST00000199312.5 |
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