Pregenerated sensors for RUFY2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020070Ensembl transcript IDs: ENSMUST00000062600.8, ENSMUST00000119567.8, ENSMUST00000122231.8, ENSMUST00000131718.8, ENSMUST00000143594.8
Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCAGCTGGGAGATGTGGAAGTCAGGCAGTTCAAGGTCTTCCCCTaGTGCACACCAGGTTGGAGGCCAACTTGGGGTTTCCCTGTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: QQLGDVEVRQFKVFP*CTPGWRPTWGFPVS Trigger: GGAGACAGGGAAACCCCAAGTTGGCCTCCAACCTGGTGTGCAGCAGGGGAAGACCTTGAACTGCCTGACTTCCACATCTCCCAGCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CCA 90 bp | TCTCCACATCCTGTCGGAGCTGCGACTCGTCTCGAAGCTGCCTCCTaGCATCGTTATACATCTCGTCTAGGCCTTGCCGGGAATGCTTGT | + |
|
Preference number: 1 (lower is better) Translates to: SPHPVGAATRLEAAS*HRYTSRLGLAGNAC Trigger: ACAAGCATTCCCGGCAAGGCCTAGACGAGATGTATAACGATGCCAGGAGGCAGCTTCGAGACGAGTCGCAGCTCCGACAGGATGTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR CCA 90 bp | GGGCACACAGCCCTCCCTCGCTGCAGGTGGTGCTGTGCAGGAGAATaGAGTTCCAAGTCATGGCATGTTAGAGGAGCATCTCTGAATGAG | + |
|
Preference number: 1 (lower is better) Translates to: GHTALPRCRWCCAGE*SSKSWHVRGASLNE Trigger: CTCATTCAGAGATGCTCCTCTAACATGCCATGACTTGGAACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAGGGCTGTGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR GCA 90 bp | TCGATCTTCAAGTCCGTTTCCAGCTGCACCAGCTGTTGCTCCTTCTaGGAGATCTGTCTCTGCAGACTGTCGGATTGGCTCAGACACTCC | + |
|
Preference number: 1 (lower is better) Translates to: SIFKSVSSCTSCCSF*EICLCRLSDWLRHS Trigger: GGAGTGTCTGAGCCAATCCGACAGTCTGCAGAGACAGATCTCGCAGAAGGAGCAACAGCTGGTGCAGCTGGAAACGGACTTGAAGATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR TCA 90 bp | GGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTACTaGACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: GCPDWNFLFLPGWPY*TQIHPPASASKCWD Trigger: ATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR GCA 90 bp | CATTCCTTCTCGATCTTCAAGTCCGTTTCCAGCTGCACCAGCTGTTaGTCCTTCTGCGAGATCTGTCTCTGCAGACTGTCGGATTGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: HSFSIFKSVSSCTSC*SFCEICLCRLSDWL Trigger: GAGCCAATCCGACAGTCTGCAGAGACAGATCTCGCAGAAGGAGCAACAGCTGGTGCAGCTGGAAACGGACTTGAAGATCGAGAAGGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CCA 90 bp | TGCGAGATCTGTCTCTGCAGACTGTCGGATTGGCTCAGACACTCCTaGGCATATTTCTCATCCTCGGCTTCTGCTTCCTTTTGCGCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: CEICLCRLSDWLRHS*AYFSSSASASFCAF Trigger: GAAGGCGCAAAAGGAAGCAGAAGCCGAGGATGAGAAATATGCCCAGGAGTGTCTGAGCCAATCCGACAGTCTGCAGAGACAGATCTCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CCA 90 bp | AGCTGTTGCTCCTTCTGCGAGATCTGTCTCTGCAGACTGTCGGATTaGCTCAGACACTCCTGGGCATATTTCTCATCCTCGGCTTCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: SCCSFCEICLCRLSD*LRHSWAYFSSSASA Trigger: AGCAGAAGCCGAGGATGAGAAATATGCCCAGGAGTGTCTGAGCCAATCCGACAGTCTGCAGAGACAGATCTCGCAGAAGGAGCAACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR GCA 90 bp | AAAGTCTGTCTCCATTCCTTCTCGATCTTCAAGTCCGTTTCCAGCTaGACCAGCTGTTGCTCCTTCTGCGAGATCTGTCTCTGCAGACTG | + |
|
Preference number: 1 (lower is better) Translates to: KVCLHSFSIFKSVSS*TSCCSFCEICLCRL Trigger: CAGTCTGCAGAGACAGATCTCGCAGAAGGAGCAACAGCTGGTGCAGCTGGAAACGGACTTGAAGATCGAGAAGGAATGGAGACAGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR TCA 90 bp | AATGAGCATTGCATGGCAGGAATCACAGACTCGCACTGGCTTTGGTaGAGAAGGCAAAGGCAGCTCGTTGTCAGAGCAGGCATTACAGAA | + |
|
Preference number: 1 (lower is better) Translates to: NEHCMAGITDSHWLW*RRQRQLVVRAGITE Trigger: TTCTGTAATGCCTGCTCTGACAACGAGCTGCCTTTGCCTTCTTCACCAAAGCCAGTGCGAGTCTGTGATTCCTGCCATGCAATGCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR TCA 90 bp | TCGTTATACATCTCGTCTAGGCCTTGCCGGGAATGCTTGTATGTTTaGAGCTCCGTTTCTACATCCACTTTGGTAACCTCCAGGTGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: SLYISSRPCRECLYV*SSVSTSTLVTSRCC Trigger: GCAGCACCTGGAGGTTACCAAAGTGGATGTAGAAACGGAGCTTCAAACATACAAGCATTCCCGGCAAGGCCTAGACGAGATGTATAACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR TCA 90 bp | CAGGAGAATGGAGTTCCAAGTCATGGCATGTTAGAGGAGCATCTCTaGATGAGCATTGCATGGCAGGAATCACAGACTCGCACTGGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: QENGVPSHGMLEEHL*MSIAWQESQTRTGF Trigger: AAAGCCAGTGCGAGTCTGTGATTCCTGCCATGCAATGCTCATTCAGAGATGCTCCTCTAACATGCCATGACTTGGAACTCCATTCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CCA 90 bp | ATGAATGTTTTGCTTGCATGTATGTCTATGCACCACATATATGCTTaGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGACT | + |
|
Preference number: 1 (lower is better) Translates to: MNVLLACMSMHHIYA*CPRRSEAGVRSHGT Trigger: AGTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGCATATATGTGGTGCATAGACATACATGCAAGCAAAACATTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR GCA 90 bp | TCTAAGGTTACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTTGTaGTATCACAAGAGGGCGGGAGGATTAGAAAACGGAGGTGCTAAA | + |
|
Preference number: 1 (lower is better) Translates to: SKVTGSKVSEVGLQL*YHKRAGGLENGGAK Trigger: TTTAGCACCTCCGTTTTCTAATCCTCCCGCCCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGTAACCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR GCA 90 bp | ATTTATGAATGTTTTGCTTGCATGTATGTCTATGCACCACATATATaGTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGG | + |
|
Preference number: 1 (lower is better) Translates to: IYECFACMYVYAPHI*LVPTEVRSRCQIPW Trigger: CCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGCATATATGTGGTGCATAGACATACATGCAAGCAAAACATTCATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CCA 90 bp | GGCACCTTCAAGTGCCTACTCATCAGTTCAGAAGCAAATAAGCTGTaGCCTTGTTCTCAAAAAGGCCTCTATAAGGTAAGGCAAATGTGC | + |
|
Preference number: 1 (lower is better) Translates to: GTFKCLLISSEANKL*PCSQKGLYKVRQMC Trigger: GCACATTTGCCTTACCTTATAGAGGCCTTTTTGAGAACAAGGCCACAGCTTATTTGCTTCTGAACTGATGAGTAGGCACTTGAAGGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CCA 90 bp | ACAACTAAATTAGCATCTTACCAGACAATGAAGACTACACAGACCTaGGATGGAAGCACACACCTATATCCCAGCACTTCAGAGCTTAGG | + |
|
Preference number: 1 (lower is better) Translates to: TTKLASYQTMKTTQT*DGSTHLYPSTSELR Trigger: CCTAAGCTCTGAAGTGCTGGGATATAGGTGTGTGCTTCCATCCCAGGTCTGTGTAGTCTTCATTGTCTGGTAAGATGCTAATTTAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR TCA 90 bp | TGCTGCCGAGTTCTCATTAAGATCAGCTCATTTTCACTACGCAATTaGTGGTTTTCTTCTTGGAGCTTTATGATATTATTCTTCGCTATT | + |
|
Preference number: 1 (lower is better) Translates to: CCRVLIKISSFSLRN*WFSSWSFMILFFAI Trigger: AATAGCGAAGAATAATATCATAAAGCTCCAAGAAGAAAACCATCAATTGCGTAGTGAAAATGAGCTGATCTTAATGAGAACTCGGCAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR TCA 90 bp | AAAGGCCTCTATAAGGTAAGGCAAATGTGCATTAGCTCTGCTATCTaGCCTTTTGTTAAAGGTTACTTGATAGTTGAAGTAGTGCTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: KGLYKVRQMCISSAI*PFVKGYLIVEVVLK Trigger: TTTTAGCACTACTTCAACTATCAAGTAACCTTTAACAAAAGGTCAGATAGCAGAGCTAATGCACATTTGCCTTACCTTATAGAGGCCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR TCA 90 bp | AAAAATAAGGAGCTACTATCTAAAGTACCTAATACACATAGAGGGTaGAATTCTACTGTGGGCAAGCGTAAATATGCCAGTGTAATGCTT | + |
|
Preference number: 1 (lower is better) Translates to: KNKELLSKVPNTHRG*NSTVGKRKYASVML Trigger: AAGCATTACACTGGCATATTTACGCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTAGCTCCTTATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCACTGTTTGTCCCCAGGCCCAGCTACACTCCTTGCCTCCCTTGGCCATCAAGGCAAGGTACAGTACTaGCTGGGCACACAGCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SHCLSPGPATLLASLGHQGKVQY*LGTQPS Trigger: GGAGGGCTGTGTGCCCAGTCAGTACTGTACCTTGCC...TTGATGGCCAAGGGAGGCAAGGAGTGTAGCTGGGCCTGGGGACAAACAGTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGGTCTCACAGCAGCCATaGAGGGTCCCTGCAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QKQVSDPMGLELETTPCGVSQQP*RVPAAW Trigger: CCAGGCTGCAGGGACCCTCCATGGCTGCTGTGAGAC...CCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCTGCTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCGCCCGCCGTGTCTCACAGCAGCCATGGAGGGTCCCTGCAGCCTGGACATTTTCCATTTAACATGTaGGTATGGGTTCTGCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: RAPAVSHSSHGGSLQPGHFPFNM*VWVLLL Trigger: CAAGAGCAGAACCCATACTCACATGTTAAATGGAAA...ATGTCCAGGCTGCAGGGACCCTCCATGGCTGCTGTGAGACACGGCGGGCGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTCCCTCGCTGCAGGTGGTGCTGTGCAGGAGAATGGAGTTCCAAGTCATTCAGATCTGCCCTTGTaGACAAGGCTGAGGAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QPSLAAGGAVQENGVPSHSDLPL*TRLRSA Trigger: TGCACTCCTCAGCCTTGTGCACAAGGGCAGATCTGA...ATGACTTGGAACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAGGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTTACTGAACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGATTGGCAAGGTACAGTACTaGCTGGGCACACAGCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GLTELRSIHLPLHLSAGIGKVQY*LGTQPS Trigger: GGAGGGCTGTGTGCCCAGTCAGTACTGTACCTTGCC...AATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCTTACTGAACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGATTCTCCCTCGCTGCAGGTaGTGCTGTGCAGGAGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: GLTELRSIHLPLHLSAGILPRCR*CCAGEW Trigger: CCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAG...AATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR TCA 90 bp | GTACCTGGCCAATGTGTACAAAGTATCAGGGGCTCCATCCCCAGCACCACATACCCAGGGTGGCCTTACTaGACTCAGATCCATCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: VPGQCVQSIRGSIPSTTYPGWPY*TQIHPP Trigger: AGGTGGATGGATCTGAGTTCAGTAAGGCCACCCTGG...GTATGTGGTGCTGGGGATGGAGCCCCTGATACTTTGTACACATTGGCCAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCCTCCCTCGCTGCAGGTGGTGCTGTGCAGGAGAATGGAGTTCCAAGTCATAGGAGCATCTCTGAATaGGCATTGCATGGCAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: QPSLAAGGAVQENGVPSHRSISE*ALHGRN Trigger: ATTCCTGCCATGCAATGCTCATTCAGAGATGCTCCT...ATGACTTGGAACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCACCACACCATGTGGGTaGTGGGAAGTGAACCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LQGQEQRATATVLRDGVFTTPCG*WEVNPG Trigger: ACCTGGGTTCACTTCCCAGCACCCACATGGTGTGGT...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTCCCTCGCTGCAGGTGGTGCTGTGCAGGAGAATGGAGTTCCAAGTCATATGCTAAGATGTGTGTaGCAGGAATCAAGTGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: QPSLAAGGAVQENGVPSHMLRCV*QESSAL Trigger: CAGTGCACTTGATTCCTGGCACACACATCTTAGCAT...ATGACTTGGAACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTTGTGCTATCACAAGAGGGTCTCACAGCAGCCATaGAGGGTCCCTGCAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VTGSKVSEVGLQLCYHKRVSQQP*RVPAAW Trigger: CCAGGCTGCAGGGACCCTCCATGGCTGCTGTGAGAC...CCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACCCATGTGTGAAGAAGAGTCAGTCAGGAAGCAGCTTGCTTTTAGTAGTAGGGTCTCACAGCAGCCATaGAGGGTCCCTGCAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TPMCEEESVRKQLAFSSRVSQQP*RVPAAW Trigger: CCAGGCTGCAGGGACCCTCCATGGCTGCTGTGAGAC...CCTACTACTAAAAGCAAGCTGCTTCCTGACTGACTCTTCTTCACACATGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGACTGTCGGATTGGCTCAGACACTCCTGGGCATATTTCTCATCCTCGGCTCCATGGGACTGGAACTaGAAACCACACCATGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: CRLSDWLRHSWAYFSSSAPWDWN*KPHHVG Trigger: ACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGG...AGCCGAGGATGAGAAATATGCCCAGGAGTGTCTGAGCCAATCCGACAGTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCACTGCCTCGCTGCAGGTGGTaGTGTGCAGGAGAATGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: THLLYVMLRCVCQESSALPRCRW*CAGEWS Trigger: ACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGG...CAGTGCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTCTGGGATTGAAGGCGTaGGCCACCATTTTAAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLLGLKA*ATILKT Trigger: GGTTTTTAAAATGGTGGCCCACGCCTTCAATCCCAG...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCCATGGGACTGGAACTaGAAACCACACCATGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LQGQEQRATATVLRDGVFPWDWN*KPHHVG Trigger: ACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGG...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCAGACTGTCGGATTGGCTCAGACACTCCTGGGCATATTTCTCATCCTCGGCTAGGAATCAAGTGCACTaGAAGGCCAAGAGCAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: CRLSDWLRHSWAYFSSSARNQVH*KAKSKE Trigger: CTCTTTGCTCTTGGCCTTGCAGTGCACTTGATTCCT...AGCCGAGGATGAGAAATATGCCCAGGAGTGTCTGAGCCAATCCGACAGTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTTACTGAACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGATTTTAGAAACCTGTTTGTaGGCTGGAGGCAAGGTACAG | + |
|
Preference number: 2 (lower is better) Translates to: GLTELRSIHLPLHLSAGILETCL*AGGKVQ Trigger: CTGTACCTTGCCTCCAGCTCACAAACAGGTTTCTAA...AATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCTCAGATCTGCCCTTGTaGACAAGGCTGAGGAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QNTPAVCDAKMCVPGIKCSDLPL*TRLRSA Trigger: TGCACTCCTCAGCCTTGTGCACAAGGGCAGATCTGA...GCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCATCACATATATGCTTGGTaGCCACGGAGGTCAGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QGQEQRATATVLRDGVFHHIYAW*PRRSEA Trigger: TGCTTCTGACCTCCGTGGGCACCAAGCATATATGTG...ATGGAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCATTACAGAAAATTTCTCCGCAGTTTCTACAGTGGTGCTTTCTTTTGGAGCTCCCTCGCTGCAGGTaGTGCTGTGCAGGAGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: QALQKISPQFLQWCFLLELPRCR*CCAGEW Trigger: CCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAG...CTCCAAAAGAAAGCACCACTGTAGAAACTGCGGAGAAATTTTCTGTAATGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCATAGGTGTCAGATCCCATaGGACTGGAACTGGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: QGQEQRATATVLRDGVFHRCQIP*DWNWKP Trigger: TGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT...ATGGAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 90 bp | TCACAGACTCGCACTGGCTTTGGTGAAGAAGGCAAAGGCAGCTCGTaGTCAGAGCAGGCATTACAGAAAATTTCTCCGCAGTTTCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: SQTRTGFGEEGKGSS*SEQALQKISPQFLQ Trigger: CTGTAGAAACTGCGGAGAAATTTTCTGTAATGCCTGCTCTGACAACGAGCTGCCTTTGCCTTCTTCACCAAAGCCAGTGCGAGTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTTGTGCTATCACAAGAGGTCAGATCTGCCCTTGTaGACAAGGCTGAGGAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VTGSKVSEVGLQLCYHKRSDLPL*TRLRSA Trigger: TGCACTCCTCAGCCTTGTGCACAAGGGCAGATCTGA...CCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCACTGCACATATATGCTTGGTaGCCACGGAGGTCAGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: THLLYVMLRCVCQESSALHIYAW*PRRSEA Trigger: TGCTTCTGACCTCCGTGGGCACCAAGCATATATGTG...CAGTGCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACCCATGTGTGAAGAAGAGTCAGTCAGGAAGCAGCTTGCTTTTAGTAGTAGGCTCATCCTCGGCTTCTaGTTCCTTTTGCGCCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TPMCEEESVRKQLAFSSRLILGF*FLLRLL Trigger: GAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGATGAG...CCTACTACTAAAAGCAAGCTGCTTCCTGACTGACTCTTCTTCACACATGGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCAGGTGTCAGATCCCATaGGACTGGAACTGGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: QNTPAVCDAKMCVPGIKCRCQIP*DWNWKP Trigger: TGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT...GCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 90 bp | TCTTCTAAGGTTACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTaGTGCTATCACAAGAGGGCGGGAGGATTAGAAAACGGAGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SSKVTGSKVSEVGLQ*CYHKRAGGLENGGA Trigger: AGCACCTCCGTTTTCTAATCCTCCCGCCCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGTAACCTTAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 90 bp | TATGAATGTTTTGCTTGCATGTATGTCTATGCACCACATATATGCTaGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: YECFACMYVYAPHIC*VPTEVRSRCQIPWD Trigger: GTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGCATATATGTGGTGCATAGACATACATGCAAGCAAAACATTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 90 bp | CAGACACTCCTGGGCATATTTCTCATCCTCGGCTTCTGCTTCCTTTaGCGCCTTCTCTGCTTGCTGCAATCTGGTGTAATTCAAATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: QTLLGIFLILGFCFL*RLLCLLQSGVIQIN Trigger: GTTGATTTGAATTACACCAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGATGAGAAATATGCCCAGGAGTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCATGCCAACTTGTACTGATAGCTCATTCTCCACATCCTGTCGGAGCTGCGGAATGCTTGTATGTTTaGAGCTCCGTTTCTACATCC | + |
|
Preference number: 2 (lower is better) Translates to: ASCQLVLIAHSPHPVGAAECLYV*SSVSTS Trigger: GGATGTAGAAACGGAGCTTCAAACATACAAGCATTC...CGCAGCTCCGACAGGATGTGGAGAATGAGCTATCAGTACAAGTTGGCATGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCAGGGATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAATTAGAAACCTGTTTGTaGGCTGGAGGCAAGGTACAG | + |
|
Preference number: 2 (lower is better) Translates to: FSGMESSIRALYGCLTMQLETCL*AGGKVQ Trigger: CTGTACCTTGCCTCCAGCTCACAAACAGGTTTCTAA...TTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCATCCCTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | GTACCTGGCCAATGTGTACAAAGTATCAGGGGCTCCATCCCCAGCACCACATACAGGTTACTTGATAGTTaGAGTAGTGCTAAAACATGC | + |
|
Preference number: 2 (lower is better) Translates to: VPGQCVQSIRGSIPSTTYRLLDS*SSAKTC Trigger: GCATGTTTTAGCACTACTTCAACTATCAAGTAACCT...GTATGTGGTGCTGGGGATGGAGCCCCTGATACTTTGTACACATTGGCCAGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR GCA 90 bp | TACTATCTAAAGTACCTAATACACATAGAGGGTGAAATTCTACTGTGGGCAAGCCCTCGCTGCAGGTGGTaGTGTGCAGGAGAATGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: YYLKYLIHIEGEILLWASPRCRW*CAGEWS Trigger: ACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGG...GCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATACCATGGGACTGGAACTaGAAACCACACCATGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: MESSIRALYGCLTMQSCIPWDWN*KPHHVG Trigger: ACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGG...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTTTTCCATTTAACATGTaGGTATGGGTTCTGCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: TARPRAKSNSYSSQGWSLFPFNM*VWVLLL Trigger: CAAGAGCAGAACCCATACTCACATGTTAAATGGAAA...AAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACCCATGTGTGAAGAAGAGTCAGTCAGGAAGCAGCTTGCTTTTAGTAGTAGGAGAGTTTGTGACACATaGAGATGCAGTAGCTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TPMCEEESVRKQLAFSSRRVCDT*RCSSCH Trigger: ATGGCAGCTACTGCATCTTCATGTGTCACAAACTCT...CCTACTACTAAAAGCAAGCTGCTTCCTGACTGACTCTTCTTCACACATGGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAAATGGTCATGATTTAAGTAACTTAATGCTCCGTGTCTCCCACACACACCCCTCTGGCTGTCCTGACTaGAACTTCCTCTTTCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: LNGHDLSNLMLRVSHTHPSGCPD*NFLFLP Trigger: TGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGA...GGGGTGTGTGTGGGAGACACGGAGCATTAAGTTACTTAAATCATGACCATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGTGAAGGAAAAGCTAGAGGCCAGACCACTGGTCCTTTAGTCCACTATATGTACACAGACCTGGGATaGAAGCACACACCTATATCC | + |
|
Preference number: 2 (lower is better) Translates to: ISEGKARGQTTGPLVHYMYTDLG*KHTPIS Trigger: GGATATAGGTGTGTGCTTCCATCCCAGGTCTGTGTA...CATATAGTGGACTAAAGGACCAGTGGTCTGGCCTCTAGCTTTTCCTTCACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGTGAAGGAAAAGCTAGAGGCCAGACCACTGGTCCTTTAGTCCACTATATGAAGACTACACAGACCTaGGATGGAAGCACACACCTA | + |
|
Preference number: 2 (lower is better) Translates to: ISEGKARGQTTGPLVHYMKTTQT*DGSTHL Trigger: TAGGTGTGTGCTTCCATCCCAGGTCTGTGTAGTCTT...CATATAGTGGACTAAAGGACCAGTGGTCTGGCCTCTAGCTTTTCCTTCACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCATTACAGAAAATTTCTCCGCAGTTTCTACAGTGGTGCTTTCTTTTGGAGGGGCAGTGGCCAGCCTaGTTTGAGAACTGCTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QALQKISPQFLQWCFLLEGQWPA*FENCFK Trigger: TTTAAAGCAGTTCTCAAACCAGGCTGGCCACTGCCC...CTCCAAAAGAAAGCACCACTGTAGAAACTGCGGAGAAATTTTCTGTAATGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATAAGGTGTCAGATCCCATaGGACTGGAACTGGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: MESSIRALYGCLTMQSCIRCQIP*DWNWKP Trigger: TGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGAAAAATACCCAGTCACTGAGCAGTGTTCTTGGGAGTGTAAAATCACTAGGTCCCCTTGTTCCCTaGGTAGGAATGTTTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: DQKNTQSLSSVLGSVKSLGPLVP*VGMFSP Trigger: AGGAGAAAACATTCCTACCCAGGGAACAAGGGGACC...TAGTGATTTTACACTCCCAAGAACACTGCTCAGTGACTGGGTATTTTTCTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CAA 90 bp | GAGAGTGAAAATTCCTTCTCACAAAGCTTACAGTGGGTTGCATCTTaGTCTTTTAACCAGACCAGTCCCTGTAGTGCTTTGTTGGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ESENSFSQSLQWVAS*SFNQTSPCSALLAS Trigger: AGAAGCCAACAAAGCACTACAGGGACTGGTCTGGTTAAAAGACAAAGATGCAACCCACTGTAAGCTTTGTGAGAAGGAATTTTCACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCTATTCTTATCTCACACACAGCAGGGGAACTCGTTAGTGCTGCTCCAGAAATTAGCTCTGCTATCTaGCCTTTTGTTAAAGGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SSILISHTAGELVSAAPEISSAI*PFVKGY Trigger: GTAACCTTTAACAAAAGGTCAGATAGCAGAGCTAAT...TTCTGGAGCAGCACTAACGAGTTCCCCTGCTGTGTGTGAGATAAGAATAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR TCA 90 bp | GATCAGAAAAATACCCAGTCACTGAGCAGTGTTCTTGGGAGTGTAAAATCACTACATCTTACCAGACAATaGAGACTACACAGACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: DQKNTQSLSSVLGSVKSLHLTRQ*RLHRPG Trigger: CCCAGGTCTGTGTAGTCTTCATTGTCTGGTAAGATG...TAGTGATTTTACACTCCCAAGAACACTGCTCAGTGACTGGGTATTTTTCTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CAA 90 bp | TTTCGATTCGCAGAGTTTGCTGCCAAGTTCTTGCAGAGCTTGTTCTaGTTCCTGATAAATCCTTTTCAACTGCTGATTTTCATCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FRFAEFAAKFLQSLF*FLINPFQLLIFILE Trigger: CTCCAGGATGAAAATCAGCAGTTGAAAAGGATTTATCAGGAACAAGAACAAGCTCTGCAAGAACTTGGCAGCAAACTCTGCGAATCGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CAA 90 bp | GCATTACAGAAAATTTCTCCGCAGTTTCTACAGTGGTGCTTTCTTTaGGAGAGTGAAAATTCCTTCTCACAAAGCTTACAGTGGGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ALQKISPQFLQWCFL*ESENSFSQSLQWVA Trigger: TGCAACCCACTGTAAGCTTTGTGAGAAGGAATTTTCACTCTCCAAAAGAAAGCACCACTGTAGAAACTGCGGAGAAATTTTCTGTAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGTGAAGGAAAAGCTAGAGGCCAGACCACTGGTCCTTTAGTCCACTATATGTGCTATCTTAAAATCTaGTTAAGTACAGGGACGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ISEGKARGQTTGPLVHYMCYLKI*LSTGTE Trigger: TTCCGTCCCTGTACTTAATCAGATTTTAAGATAGCA...CATATAGTGGACTAAAGGACCAGTGGTCTGGCCTCTAGCTTTTCCTTCACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCAGGGATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAATATGAATGTTTTGCTTaGATGTATGTCTATGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: FSGMESSIRALYGCLTMQYECFA*MYVYAP Trigger: TGGTGCATAGACATACATGCAAGCAAAACATTCATA...TTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCATCCCTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGAAAAATACCCAGTCACTGAGCAGTGTTCTTGGGAGTGTAAAATCACTAGAAGCAAATAAGCTGTaGCCTTGTTCTCAAAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: DQKNTQSLSSVLGSVKSLEANKL*PCSQKG Trigger: GCCTTTTTGAGAACAAGGCCACAGCTTATTTGCTTC...TAGTGATTTTACACTCCCAAGAACACTGCTCAGTGACTGGGTATTTTTCTGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CAA 90 bp | ATCGTCTATTTTAAGTTTCGATTCGCAGAGTTTGCTGCCAAGTTCTaGCAGAGCTTGTTCTTGTTCCTGATAAATCCTTTTCAACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IVYFKFRFAEFAAKF*QSLFLFLINPFQLL Trigger: CAGCAGTTGAAAAGGATTTATCAGGAACAAGAACAAGCTCTGCAAGAACTTGGCAGCAAACTCTGCGAATCGAAACTTAAAATAGACGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAAGGGACACTAACTCTTCACAGGAAGTCACAAGAGAACTCTTGTATCTTTTTCCATTTAACATGTaGGTATGGGTTCTGCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: NSRDTNSSQEVTRELLYLFPFNM*VWVLLL Trigger: CAAGAGCAGAACCCATACTCACATGTTAAATGGAAA...AAGATACAAGAGTTCTCTTGTGACTTCCTGTGAAGAGTTAGTGTCCCTTGAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCATTACAGAAAATTTCTCCGCAGTTTCTACAGTGGTGCTTTCTTTTGGAGGTTTCATGTCTAAGATaGGATAGGACATCTTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QALQKISPQFLQWCFLLEVSCLR*DRTSFS Trigger: GGAAAAAGATGTCCTATCTCATCTTAGACATGAAAC...CTCCAAAAGAAAGCACCACTGTAGAAACTGCGGAGAAATTTTCTGTAATGCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CAA 90 bp | TTTAAGTTTCGATTCGCAGAGTTTGCTGCCAAGTTCTTGCAGAGCTaGTTCTTGTTCCTGATAAATCCTTTTCAACTGCTGATTTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: FKFRFAEFAAKFLQS*FLFLINPFQLLIFI Trigger: GATGAAAATCAGCAGTTGAAAAGGATTTATCAGGAACAAGAACAAGCTCTGCAAGAACTTGGCAGCAAACTCTGCGAATCGAAACTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATATATGAATGTTTTGCTTaGATGTATGTCTATGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: MESSIRALYGCLTMQSCIYECFA*MYVYAP Trigger: TGGTGCATAGACATACATGCAAGCAAAACATTCATA...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR TCA 72 bp | GAAGGTGGGACTCAGATCTGCCCTTGTGCACAAGGCTaGGGAGTGCACGTGAGGAGCCCGCCAGGGCGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: EGGTQICPCAQG*GVHVRSPPGRP Trigger: CGGGCGCCCTGGCGGGCTCCTCACGTGCACTCCTCAGCCTTGTGCACAAGGGCAGATCTGAGTCCCACCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CCA 72 bp | CCTGTCGGAGCTGCGACTCGTCTCGAAGCTGCCTCCTaGCATCGTTATACATCTCGTCTAGGCCTTGCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PVGAATRLEAAS*HRYTSRLGLAG Trigger: CCCGGCAAGGCCTAGACGAGATGTATAACGATGCCAGGAGGCAGCTTCGAGACGAGTCGCAGCTCCGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR GCA 72 bp | GGTACAGTACTGACTGGGCACACAGCCCTCCCTCGCTaGAGGTGGTGCTGTGCAGGAGAATGGAGTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GTVLTGHTALPR*RWCCAGEWSSK Trigger: CTTGGAACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAGGGCTGTGTGCCCAGTCAGTACTGTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119567.8 ENSMUST00000143594.8 |
||
| 3UTR GCA 72 bp | CTGACTGGGCACACAGCCCTCCCTCGCTGCAGGTGGTaGTGTGCAGGAGAATGGAGTTCCAAGTCATGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LTGHTALPRCRW*CAGEWSSKSWH Trigger: ATGCCATGACTTGGAACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAGGGCTGTGTGCCCAGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR GCA 72 bp | TCCACATCCTGTCGGAGCTGCGACTCGTCTCGAAGCTaGCTCCTGGCATCGTTATACATCTCGTCTAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: STSCRSCDSSRS*LLASLYISSRP Trigger: AGGCCTAGACGAGATGTATAACGATGCCAGGAGGCAGCTTCGAGACGAGTCGCAGCTCCGACAGGATGTGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR GCA 72 bp | GATGTGGAAGTCAGGCAGTTCAAGGTCTTCCCCTGCTaGACACCAGGTTGGAGGCCAACTTGGGGTTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: DVEVRQFKVFPC*TPGWRPTWGFP Trigger: AGGGAAACCCCAAGTTGGCCTCCAACCTGGTGTGCAGCAGGGGAAGACCTTGAACTGCCTGACTTCCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR GCA 72 bp | CCCATGGGACTGGAACTGGAAACCACACCATGTGGGTaGTGGGAAGTGAACCCAGGTCCTGTCCTCTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PMGLELETTPCG*WEVNPGPVLCN Trigger: GTTACAGAGGACAGGACCTGGGTTCACTTCCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CCA 72 bp | AGATCCCATGGGACTGGAACTGGAAACCACACCATGTaGGTGCTGGGAAGTGAACCCAGGTCCTGTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSHGTGTGNHTM*VLGSEPRSCPL Trigger: CAGAGGACAGGACCTGGGTTCACTTCCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGTCACTGTTTGTCCCCAGGCCCAGCTACACTCCTTGCCTCCCTTGGCCATGACTCAGATCTGCCCTaGTGCACAAGGCTGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSHCLSPGPATLLASLGHDSDLP*CTRLRS Trigger: ACTCCTCAGCCTTGTGCACAAGGGCAGATCTGAGTC...ATGGCCAAGGGAGGCAAGGAGTGTAGCTGGGCCTGGGGACAAACAGTGACTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR TCA 72 bp | TGCATGGCAGGAATCACAGACTCGCACTGGCTTTGGTaGAGAAGGCAAAGGCAGCTCGTTGTCAGAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CMAGITDSHWLW*RRQRQLVVRAG Trigger: GCCTGCTCTGACAACGAGCTGCCTTTGCCTTCTTCACCAAAGCCAGTGCGAGTCTGTGATTCCTGCCATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTTATTTAAGTCACTGTTaGTCCCCAGGCCCAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: AWCPRRSEAGVRSHGTGTYLSHC*SPGPAT Trigger: TGTAGCTGGGCCTGGGGACAAACAGTGACTTAAATA...AGTTCCAGTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR GCA 72 bp | TCGATCTTCAAGTCCGTTTCCAGCTGCACCAGCTGTTaGTCCTTCTGCGAGATCTGTCTCTGCAGACTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: SIFKSVSSCTSC*SFCEICLCRLS Trigger: CGACAGTCTGCAGAGACAGATCTCGCAGAAGGAGCAACAGCTGGTGCAGCTGGAAACGGACTTGAAGATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CCA 72 bp | ATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTaGGAAGTGAACCCAGGTCCTGTCCTCTGTAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: MGLELETTPCGC*EVNPGPVLCNC Trigger: ACAGTTACAGAGGACAGGACCTGGGTTCACTTCCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR TCA 72 bp | TGGAACTGGAAACCACACCATGTGGGTGCTGGGAAGTaGACCCAGGTCCTGTCCTCTGTAACTGTCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: WNWKPHHVGAGK*TQVLSSVTVTS Trigger: TGATGTGACAGTTACAGAGGACAGGACCTGGGTTCACTTCCCAGCACCCACATGGTGTGGTTTCCAGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR GCA 72 bp | CTCCATTCCTTCTCGATCTTCAAGTCCGTTTCCAGCTaGACCAGCTGTTGCTCCTTCTGCGAGATCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHSFSIFKSVSS*TSCCSFCEICL Trigger: GAGACAGATCTCGCAGAAGGAGCAACAGCTGGTGCAGCTGGAAACGGACTTGAAGATCGAGAAGGAATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CCA 72 bp | TCCTTCTGCGAGATCTGTCTCTGCAGACTGTCGGATTaGCTCAGACACTCCTGGGCATATTTCTCATCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SFCEICLCRLSD*LRHSWAYFSSS Trigger: CGAGGATGAGAAATATGCCCAGGAGTGTCTGAGCCAATCCGACAGTCTGCAGAGACAGATCTCGCAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGAGCAGGCATTACAGAAAATTTCTCCGCAGTTTCTACAGTGGTGCTTTCTCTGCAGACTGTCGGATaGGCTCAGACACTCCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VRAGITENFSAVSTVVLSLQTVG*AQTLLG Trigger: GCCCAGGAGTGTCTGAGCCAATCCGACAGTCTGCAG...AGAAAGCACCACTGTAGAAACTGCGGAGAAATTTTCTGTAATGCCTGCTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR TCA 72 bp | GACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTACTaGACTCAGATCCATCCACCTGCCTCTGCATCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: DWNFLFLPGWPY*TQIHPPASASK Trigger: CTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CCA 72 bp | TGTCTCTGCAGACTGTCGGATTGGCTCAGACACTCCTaGGCATATTTCTCATCCTCGGCTTCTGCTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLCRLSDWLRHS*AYFSSSASASF Trigger: AAAGGAAGCAGAAGCCGAGGATGAGAAATATGCCCAGGAGTGTCTGAGCCAATCCGACAGTCTGCAGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR TCA 72 bp | GGAGTTCCAAGTCATGGCATGTTAGAGGAGCATCTCTaGATGAGCATTGCATGGCAGGAATCACAGACTCGC | + |
|
Preference number: 3 (lower is better) Translates to: GVPSHGMLEEHL*MSIAWQESQTR Trigger: GCGAGTCTGTGATTCCTGCCATGCAATGCTCATTCAGAGATGCTCCTCTAACATGCCATGACTTGGAACTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CCA 72 bp | GATAGAACTTTGAAAAAGTCTTGCCATCCTCGAAGGTaGGACTCAGATCTGCCCTTGTGCACAAGGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: DRTLKKSCHPRR*DSDLPLCTRLR Trigger: CCTCAGCCTTGTGCACAAGGGCAGATCTGAGTCCCACCTTCGAGGATGGCAAGACTTTTTCAAAGTTCTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CCA 72 bp | TTGCTTGCATGTATGTCTATGCACCACATATATGCTTaGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LLACMSMHHIYA*CPRRSEAGVRS Trigger: GGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGCATATATGTGGTGCATAGACATACATGCAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGCCAACACAGCTTGAAAACAAAGGTTTCTAGCTTCCATCGAAAGGTAGCTGACTCAGATCTGCCCTaGTGCACAAGGCTGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LCQHSLKTKVSSFHRKVADSDLP*CTRLRS Trigger: ACTCCTCAGCCTTGTGCACAAGGGCAGATCTGAGTC...AGCTACCTTTCGATGGAAGCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCTGTGCCAACACAGCTaGAAAACAAAGGTTTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQGQEQRATATVLRDGVFLCQHS*KTKVSS Trigger: GCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCAGTGGCCAGCCTGGTTaGAGAACTGCTTTAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LQGQEQRATATVLRDGVFSGQPG*RTALKT Trigger: AGTTTTTAAAGCAGTTCTCAAACCAGGCTGGCCACT...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR TCA 72 bp | ATCTCGTCTAGGCCTTGCCGGGAATGCTTGTATGTTTaGAGCTCCGTTTCTACATCCACTTTGGTAACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ISSRPCRECLYV*SSVSTSTLVTS Trigger: GGAGGTTACCAAAGTGGATGTAGAAACGGAGCTTCAAACATACAAGCATTCCCGGCAAGGCCTAGACGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR GCA 72 bp | ACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTTGTaGTATCACAAGAGGGCGGGAGGATTAGAAAACGGA | + |
|
Preference number: 3 (lower is better) Translates to: TGSKVSEVGLQL*YHKRAGGLENG Trigger: TCCGTTTTCTAATCCTCCCGCCCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR GCA 72 bp | TGTTTTGCTTGCATGTATGTCTATGCACCACATATATaGTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CFACMYVYAPHI*LVPTEVRSRCQ Trigger: CTGACACCTGCTTCTGACCTCCGTGGGCACCAAGCATATATGTGGTGCATAGACATACATGCAAGCAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR GCA 72 bp | AGAACACACCTGCTGTATGTGATGCTAAGATGTGTGTaGCAGGAATCAAGTGCACTGCAAGGCCAAGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RTHLLYVMLRCV*QESSALQGQEQ Trigger: TTGCTCTTGGCCTTGCAGTGCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGTTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCATCTGTGCCAACACAGCTaGAAAACAAAGGTTTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QGQEQRATATVLRDGVFHLCQHS*KTKVSS Trigger: GCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG...ATGGAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCACTGTATTTAAGTCACTGTTaGTCCCCAGGCCCAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: THLLYVMLRCVCQESSALYLSHC*SPGPAT Trigger: TGTAGCTGGGCCTGGGGACAAACAGTGACTTAAATA...CAGTGCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACCTGGCCAATGTGTACAAAGTATCAGGGGCTCCATCCCCAGCACCACATACGAAGGGATTAAATCATaGGTCTTTTCCATTGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VPGQCVQSIRGSIPSTTYEGIKS*VFSIVE Trigger: CTCTACAATGGAAAAGACCAATGATTTAATCCCTTC...GTATGTGGTGCTGGGGATGGAGCCCCTGATACTTTGTACACATTGGCCAGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTTTGCGCCTTCTCTGCTTGCTGCAATCTGGTGTAATTCAAATCAACTTTGACTCAGATCTGCCCTaGTGCACAAGGCTGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FLLRLLCLLQSGVIQINFDSDLP*CTRLRS Trigger: ACTCCTCAGCCTTGTGCACAAGGGCAGATCTGAGTC...AAAGTTGATTTGAATTACACCAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCCTGTGCCAACACAGCTaGAAAACAAAGGTTTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QNTPAVCDAKMCVPGIKCLCQHS*KTKVSS Trigger: GCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG...GCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR GCA 72 bp | TCTTTCTCCAACAGCTTCATGGCCAGCTCCATCTCATaGTTCATGCCAACTTGTACTGATAGCTCATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SFSNSFMASSIS*FMPTCTDSSFS Trigger: GGAGAATGAGCTATCAGTACAAGTTGGCATGAAGCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR CCA 72 bp | ATCTTACCAGACAATGAAGACTACACAGACCTGGGATaGAAGCACACACCTATATCCCAGCACTTCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ILPDNEDYTDLG*KHTPISQHFRA Trigger: AGCTCTGAAGTGCTGGGATATAGGTGTGTGCTTCCATCCCAGGTCTGTGTAGTCTTCATTGTCTGGTAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR GCA 72 bp | AGCTCCGTTTCTACATCCACTTTGGTAACCTCCAGGTaGTGCCGAGTTCTCATTAAGATCAGCTCATTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSVSTSTLVTSR*CRVLIKISSFS Trigger: TGAAAATGAGCTGATCTTAATGAGAACTCGGCAGCACCTGGAGGTTACCAAAGTGGATGTAGAAACGGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR GCA 72 bp | CTCATCCTCGGCTTCTGCTTCCTTTTGCGCCTTCTCTaGTTGCTGCAATCTGGTGTAATTCAAATCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LILGFCFLLRLL*LLQSGVIQINF Trigger: AAAGTTGATTTGAATTACACCAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CCA 72 bp | TTAGCATCTTACCAGACAATGAAGACTACACAGACCTaGGATGGAAGCACACACCTATATCCCAGCACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LASYQTMKTTQT*DGSTHLYPSTS Trigger: TGAAGTGCTGGGATATAGGTGTGTGCTTCCATCCCAGGTCTGTGTAGTCTTCATTGTCTGGTAAGATGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGAGCAGGCATTACAGAAAATTTCTCCGCAGTTTCTACAGTGGTGCTTTCTAGTGGCCAGCCTGGTTaGAGAACTGCTTTAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: VRAGITENFSAVSTVVLSSGQPG*RTALKT Trigger: AGTTTTTAAAGCAGTTCTCAAACCAGGCTGGCCACT...AGAAAGCACCACTGTAGAAACTGCGGAGAAATTTTCTGTAATGCCTGCTCTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR GCA 72 bp | TCCGTTTCTACATCCACTTTGGTAACCTCCAGGTGCTaGCGAGTTCTCATTAAGATCAGCTCATTTTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: SVSTSTLVTSRC*RVLIKISSFSL Trigger: TAGTGAAAATGAGCTGATCTTAATGAGAACTCGGCAGCACCTGGAGGTTACCAAAGTGGATGTAGAAACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR CCA 72 bp | TTGGAGAGTGAAAATTCCTTCTCACAAAGCTTACAGTaGGTTGCATCTTTGTCTTTTAACCAGACCAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LESENSFSQSLQ*VASLSFNQTSP Trigger: GGGACTGGTCTGGTTAAAAGACAAAGATGCAACCCACTGTAAGCTTTGTGAGAAGGAATTTTCACTCTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCATGCTTCATGCCAACTTGTACTGATAGCTCATTCTCCACATCCTGTCGGAATTTTCACTACGCAATaGATGGTTTTCTTCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SHASCQLVLIAHSPHPVGIFTTQ*MVFFLE Trigger: CTCCAAGAAGAAAACCATCAATTGCGTAGTGAAAAT...TCCGACAGGATGTGGAGAATGAGCTATCAGTACAAGTTGGCATGAAGCATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR TCA 72 bp | TTTTCTTTCAAGCCATCTTCAGAGCCCTGCAGCCTTTaGTACATCTCAATGTTGATTGCTTTGACTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FSFKPSSEPCSL*YISMLIALTSS Trigger: GGAAGAAGTCAAAGCAATCAACATTGAGATGTATCAAAGGCTGCAGGGCTCTGAAGATGGCTTGAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR GCA 72 bp | TCAGGGATGGAGTCTTCCATCAGAGCTCTGTACGGTTaGTTAACTATGCAAAGCTGTATATTTATGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SGMESSIRALYG*LTMQSCIFMCV Trigger: TACACACATAAATATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCATCCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR TCA 72 bp | GAGCTACTATCTAAAGTACCTAATACACATAGAGGGTaGAATTCTACTGTGGGCAAGCGTAAATATGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ELLSKVPNTHRG*NSTVGKRKYAS Trigger: ACTGGCATATTTACGCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTAGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGAGTGCACGTGAGGAGCCCGCCAGGGCGCCCGCCGTGTCTCACAGCAGCGCAATTGTCCTAGTCTaGGTTAACAAGTCGTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRSAREEPARAPAVSHSSAIVLV*VNKSLS Trigger: CGACAACGACTTGTTAACTCAGACTAGGACAATTGC...GCTGCTGTGAGACACGGCGGGCGCCCTGGCGGGCTCCTCACGTGCACTCCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCGCCCGCCGTGTCTCACAGCAGCCATGGAGGGTCCCTGCAGCCTGGACATCTCGAAGCTGCCTCCTaGCATCGTTATACATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RAPAVSHSSHGGSLQPGHLEAAS*HRYTSR Trigger: ACGAGATGTATAACGATGCCAGGAGGCAGCTTCGAG...ATGTCCAGGCTGCAGGGACCCTCCATGGCTGCTGTGAGACACGGCGGGCGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGAGTGCACGTGAGGAGCCCGCCAGGGCGCCCGCCGTGTCTCACAGCAGCGAATGCTTGTATGTTTaGAGCTCCGTTTCTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSAREEPARAPAVSHSSECLYV*SSVSTS Trigger: GGATGTAGAAACGGAGCTTCAAACATACAAGCATTC...GCTGCTGTGAGACACGGCGGGCGCCCTGGCGGGCTCCTCACGTGCACTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAGTGCACGTGAGGAGCCCGCCAGGGCGCCCGCCGTGTCTCACAGCAGCCCATCTCATGCTTCATaGCAACTTGTACTGATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSAREEPARAPAVSHSSPSHAS*QLVLIA Trigger: AGCTATCAGTACAAGTTGGCATGAAGCATGAGATGG...GCTGCTGTGAGACACGGCGGGCGCCCTGGCGGGCTCCTCACGTGCACTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | TCTTGCCATCCTCGAAGGTGGGACTCAGATCTGCCCTaGTGCACAAGGCTGAGGAGTGCACGTGAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCHPRRWDSDLP*CTRLRSAREEP Trigger: GGGCTCCTCACGTGCACTCCTCAGCCTTGTGCACAAGGGCAGATCTGAGTCCCACCTTCGAGGATGGCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCGCCCGCCGTGTCTCACAGCAGCCATGGAGGGTCCCTGCAGCCTGGACATCTTAGGAGCTCCCTCTaGATAATTAAGCAACGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAPAVSHSSHGGSLQPGHLRSSL*IIKQRK Trigger: CTTGCGTTGCTTAATTATCCAGAGGGAGCTCCTAAG...ATGTCCAGGCTGCAGGGACCCTCCATGGCTGCTGTGAGACACGGCGGGCGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAGTGCACGTGAGGAGCCCGCCAGGGCGCCCGCCGTGTCTCACAGCAGCCATTCTTTAAGTACATaGAGAAGTCAATCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSAREEPARAPAVSHSSHSLST*RSQSPQ Trigger: TTGGGGTGATTGACTTCTCCATGTACTTAAAGAATG...GCTGCTGTGAGACACGGCGGGCGCCCTGGCGGGCTCCTCACGTGCACTCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTACTTCTTCCAGCTGTTaGCGAAGGCCTATGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AWCPRRSEAGVRSHGTGTTSSSC*RRPMRV Trigger: CACTCTCATAGGCCTTCGGCAACAGCTGGAAGAAGT...AGTTCCAGTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTCTCGAAGCTGCCTCCTaGCATCGTTATACATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AWCPRRSEAGVRSHGTGTLEAAS*HRYTSR Trigger: ACGAGATGTATAACGATGCCAGGAGGCAGCTTCGAG...AGTTCCAGTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTTCTCCAACAGCTTCATaGCCAGCTCCATCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWCPRRSEAGVRSHGTGTSPTAS*PAPSHA Trigger: AGCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGA...AGTTCCAGTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTTCAGACAATGTTCCATaGCCACGAAGAACTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWCPRRSEAGVRSHGTGTSDNVP*PRRTAA Trigger: TGCAGCAGTTCTTCGTGGTCATGGAACATTGTCTGA...AGTTCCAGTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACTGTTTGTCCCCAGGCCCAGCTACACTCCTTGCCTCCCTTGGCCATCAAAGCTTGTACTGGTCCTaGGGGTCACTACTAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SHCLSPGPATLLASLGHQSLYWS*GSLLAL Trigger: AAGTGCTAGTAGTGACCCTCAGGACCAGTACAAGCT...TTGATGGCCAAGGGAGGCAAGGAGTGTAGCTGGGCCTGGGGACAAACAGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | TGCGACTCGTCTCGAAGCTGCCTCCTGGCATCGTTATACATCTCGTCTAGGCCTCCATGTTTAACAGGTTaGCTCTCTCCACGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CDSSRSCLLASLYISSRPPCLTG*LSPRLW Trigger: CCACAGCCGTGGAGAGAGCCAACCTGTTAAACATGG...AGGCCTAGACGAGATGTATAACGATGCCAGGAGGCAGCTTCGAGACGAGTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGCCATGTTTAACAGGTTaGCTCTCTCCACGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKQVSDPMGLELETTPCGPCLTG*LSPRLW Trigger: CCACAGCCGTGGAGAGAGCCAACCTGTTAAACATGG...CCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCTGCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTGGGAGAAGGAGATGTCTTTaGCCAGCTTGTACTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCQIPWDWNWKPHHVGAGRRRCL*PACTGP Trigger: AGGACCAGTACAAGCTGGTCAAAGACATCTCCTTCT...CCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGACTTCTTCCAGCTGTTaGCGAAGGCCTATGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKQVSDPMGLELETTPCGTSSSC*RRPMRV Trigger: CACTCTCATAGGCCTTCGGCAACAGCTGGAAGAAGT...CCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCTGCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCCCTCGCTGCAGGTGGTGCTGTGCAGGAGAATGGAGTTCCAAGTCATCCTTCACACACAGATTaGCATCAATCACGTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSLAAGGAVQENGVPSHPSHTD*HQSRSS Trigger: GCTTGAACGTGATTGATGCCAATCTGTGTGTGAAGG...ATGACTTGGAACTCCATTCTCCTGCACAGCACCACCTGCAGCGAGGGAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGTCACTGTTTGTCCCCAGGCCCAGCTACACTCCTTGCCTCCCTTGGCCATTCTCCAACAGCTTCATaGCCAGCTCCATCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHCLSPGPATLLASLGHSPTAS*PAPSHA Trigger: AGCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGA...ATGGCCAAGGGAGGCAAGGAGTGTAGCTGGGCCTGGGGACAAACAGTGACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CCCATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTGGGAAGTGAACCCAGTGTCTTGTTTCTCGTaGATGTCTTTCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMGLELETTPCGCWEVNPVSCFS*MSFSNS Trigger: GCTGTTGGAGAAAGACATTCACGAGAAACAAGACAC...TGGGTTCACTTCCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTGGGGCAATTGTCCTAGTCTaGGTTAACAAGTCGTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCQIPWDWNWKPHHVGAGAIVLV*VNKSLS Trigger: CGACAACGACTTGTTAACTCAGACTAGGACAATTGC...CCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTGGGTCTTTTGGTCTAAGATaGCGGCGATTTGAACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCQIPWDWNWKPHHVGAGSFGLR*RRFERS Trigger: GGAACGTTCAAATCGCCGCCATCTTAGACCAAAAGA...CCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTCTCCTCCATCATCAGTaGATGGTACTCATAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLLLHHQ*MVLIEL Trigger: GAGTTCTATGAGTACCATGCACTGATGATGGAGGAG...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR GCA 90 bp | TCCATCCCCAGCACCACATACAAACACTCAACAGCTGTAATCTCAGCAGCTGGGACTTCTTCCAGCTGTTaGCGAAGGCCTATGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTTYKHSTAVISAAGTSSSC*RRPMRV Trigger: CACTCTCATAGGCCTTCGGCAACAGCTGGAAGAAGT...CCCAGCTGCTGAGATTACAGCTGTTGAGTGTTTGTATGTGGTGCTGGGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTAAGTCGTTGTCGCTTTaGTCCAGCTGCCTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TARPRAKSNSYSSQGWSLKSLSL*SSCLMA Trigger: AGCCATGAGGCAGCTGGAGCAAAGCGACAACGACTT...AAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTACTGAACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGATTAGCTGTTGCTCCTTCTaGGAGATCTGTCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLTELRSIHLPLHLSAGISCCSF*EICLCR Trigger: TCTGCAGAGACAGATCTCGCAGAAGGAGCAACAGCT...AATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTTTGCTGCCAAGTTCTTaGAGAGCTTGTTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLLLPSS*RACSCS Trigger: GGAACAAGAACAAGCTCTGCAAGAACTTGGCAGCAA...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR GCA 90 bp | GTACCTGGCCAATGTGTACAAAGTATCAGGGGCTCCATCCCCAGCACCACATACTCGATTCGCAGAGTTTaGTGCCAAGTTCTTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGQCVQSIRGSIPSTTYSIRRV*CQVLAE Trigger: CTCTGCAAGAACTTGGCAGCAAACTCTGCGAATCGA...GTATGTGGTGCTGGGGATGGAGCCCCTGATACTTTGTACACATTGGCCAGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGCCTTCACACACAGATTaGCATCAATCACGTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKQVSDPMGLELETTPCGPSHTD*HQSRSS Trigger: GCTTGAACGTGATTGATGCCAATCTGTGTGTGAAGG...CCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCTGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | CGCACTGGCTTTGGTGAAGAAGGCAAAGGCAGCTCGTaGTCAGAGCAGGCATTACAGAAAATTTCTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTGFGEEGKGSS*SEQALQKISPQ Trigger: CTGCGGAGAAATTTTCTGTAATGCCTGCTCTGACAACGAGCTGCCTTTGCCTTCTTCACCAAAGCCAGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGTCACTGTTTGTCCCCAGGCCCAGCTACACTCCTTGCCTCCCTTGGCCATGAATGCTTGTATGTTTaGAGCTCCGTTTCTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSHCLSPGPATLLASLGHECLYV*SSVSTS Trigger: GGATGTAGAAACGGAGCTTCAAACATACAAGCATTC...ATGGCCAAGGGAGGCAAGGAGTGTAGCTGGGCCTGGGGACAAACAGTGACTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTAGCTTGTACTGGTCCTaGGGGTCACTACTAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TARPRAKSNSYSSQGWSLSLYWS*GSLLAL Trigger: AAGTGCTAGTAGTGACCCTCAGGACCAGTACAAGCT...AAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCAGAAGGAGATGTCTTTaGCCAGCTTGTACTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQGQEQRATATVLRDGVFRRRCL*PACTGP Trigger: AGGACCAGTACAAGCTGGTCAAAGACATCTCCTTCT...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGATGGAAGCACACACCTATATCCCAGCACTTCAGAGCTTAGGCAAGACAAGGAGCATCTCTGAATaGGCATTGCATGGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGMEAHTYIPALQSLGKTRSISE*ALHGRN Trigger: ATTCCTGCCATGCAATGCTCATTCAGAGATGCTCCT...TGTCTTGCCTAAGCTCTGAAGTGCTGGGATATAGGTGTGTGCTTCCATCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGTCACTGTTTGTCCCCAGGCCCAGCTACACTCCTTGCCTCCCTTGGCCATCCATCTCATGCTTCATaGCAACTTGTACTGATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHCLSPGPATLLASLGHPSHAS*QLVLIA Trigger: AGCTATCAGTACAAGTTGGCATGAAGCATGAGATGG...ATGGCCAAGGGAGGCAAGGAGTGTAGCTGGGCCTGGGGACAAACAGTGACTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCATACTTCTTCCAGCTGTTaGCGAAGGCCTATGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGQEQRATATVLRDGVFHTSSSC*RRPMRV Trigger: CACTCTCATAGGCCTTCGGCAACAGCTGGAAGAAGT...ATGGAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTGGGCATCTCAATGTTGATTaGTTTGACTTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCQIPWDWNWKPHHVGAGHLNVD*FDFFQL Trigger: CAGCTGGAAGAAGTCAAAGCAATCAACATTGAGATG...CCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCTTTCTCCAACAGCTTCATGGCCAGCTCCATCTCATGCTTCATGCCAACTGATCTCCTCTGCTTCTaGGTACAGCTTCTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSFSNSFMASSISCFMPTDLLCF*VQLLHQ Trigger: CTGGTGGAGAAGCTGTACCCAGAAGCAGAGGAGATC...AGTTGGCATGAAGCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGAAAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTCATTCTTTAAGTACATaGAGAAGTCAATCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AWCPRRSEAGVRSHGTGTHSLST*RSQSPQ Trigger: TTGGGGTGATTGACTTCTCCATGTACTTAAAGAATG...AGTTCCAGTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCATCTCGAAGCTGCCTCCTaGCATCGTTATACATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QGQEQRATATVLRDGVFHLEAAS*HRYTSR Trigger: ACGAGATGTATAACGATGCCAGGAGGCAGCTTCGAG...ATGGAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCATTCAGACAATGTTCCATaGCCACGAAGAACTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGQEQRATATVLRDGVFHSDNVP*PRRTAA Trigger: TGCAGCAGTTCTTCGTGGTCATGGAACATTGTCTGA...ATGGAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CTAAATGGTCATGATTTAAGTAACTTAATGCTCCGTGTCTCCCACACACACCCCTCGCACTGGCTTTGGTaGAGAAGGCAAAGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNGHDLSNLMLRVSHTHPSHWLW*RRQRQL Trigger: GAGCTGCCTTTGCCTTCTTCACCAAAGCCAGTGCGA...GGGGTGTGTGTGGGAGACACGGAGCATTAAGTTACTTAAATCATGACCATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | TGTCGGAGCTGCGACTCGTCTCGAAGCTGCCTCCTGGCATCGTTATACATCTCGCATTCTTTAAGTACATaGAGAAGTCAATCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRSCDSSRSCLLASLYISHSLST*RSQSPQ Trigger: TTGGGGTGATTGACTTCTCCATGTACTTAAAGAATG...CGAGATGTATAACGATGCCAGGAGGCAGCTTCGAGACGAGTCGCAGCTCCGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTGGGCATTCTTTAAGTACATaGAGAAGTCAATCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCQIPWDWNWKPHHVGAGHSLST*RSQSPQ Trigger: TTGGGGTGATTGACTTCTCCATGTACTTAAAGAATG...CCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCTCTTTTGGTCTAAGATaGCGGCGATTTGAACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQGQEQRATATVLRDGVFSFGLR*RRFERS Trigger: GGAACGTTCAAATCGCCGCCATCTTAGACCAAAAGA...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | CTGGGCATATTTCTCATCCTCGGCTTCTGCTTCCTTTaGCGCCTTCTCTGCTTGCTGCAATCTGGTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: LGIFLILGFCFL*RLLCLLQSGVI Trigger: AATTACACCAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGATGAGAAATATGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTGTTTCATGTCTAAGATaGGATAGGACATCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLVSCLR*DRTSFS Trigger: GGAAAAAGATGTCCTATCTCATCTTAGACATGAAAC...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCATCTCCTCCATCATCAGTaGATGGTACTCATAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QGQEQRATATVLRDGVFHLLHHQ*MVLIEL Trigger: GAGTTCTATGAGTACCATGCACTGATGATGGAGGAG...ATGGAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGGGTGTGGGTATATGTTTTATCTGTGCCAACACAGCTTGAAAACAAAGGTAAGTCGTTGTCGCTTTaGTCCAGCTGCCTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRVWVYVLSVPTQLENKGKSLSL*SSCLMA Trigger: AGCCATGAGGCAGCTGGAGCAAAGCGACAACGACTT...ACCTTTGTTTTCAAGCTGTGTTGGCACAGATAAAACATATACCCACACCCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGTGAAGGAAAAGCTAGAGGCCAGACCACTGGTCCTTTAGTCCACTATATGTGCGCCTTCTCTGCTTaGTGCAATCTTTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISEGKARGQTTGPLVHYMCAFSA*CNLCSS Trigger: GCTGGAGCAAAGATTGCAGCAAGCAGAGAAGGCGCA...CATATAGTGGACTAAAGGACCAGTGGTCTGGCCTCTAGCTTTTCCTTCACTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCTATTCTTATCTCACACACAGCAGGGGAACTCGTTAGTGCTGCTCCAGAACTTTTGCGCCTTCTCTaGTTGCTGCAATCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSILISHTAGELVSAAPELLRLL*LLQSLL Trigger: GAGCAAAGATTGCAGCAAGCAGAGAAGGCGCAAAAG...TTCTGGAGCAGCACTAACGAGTTCCCCTGCTGTGTGTGAGATAAGAATAGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR TCA 90 bp | TCTCATGCTTCATGCCAACTTGTACTGATAGCTCATTCTCCACATCCTGTCGGATCAGACAATGTTCCATaGCCACGAAGAACTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHASCQLVLIAHSPHPVGSDNVP*PRRTAA Trigger: TGCAGCAGTTCTTCGTGGTCATGGAACATTGTCTGA...TCCGACAGGATGTGGAGAATGAGCTATCAGTACAAGTTGGCATGAAGCATGAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCTATTCTTATCTCACACACAGCAGGGGAACTCGTTAGTGCTGCTCCAGAAGTGTCTTGTTTCTCGTaGATGTCTTTCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSILISHTAGELVSAAPEVSCFS*MSFSNS Trigger: GCTGTTGGAGAAAGACATTCACGAGAAACAAGACAC...TTCTGGAGCAGCACTAACGAGTTCCCCTGCTGTGTGTGAGATAAGAATAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCAACACAGCTTGAAAACAAAGGTTTCTAGCTTCCATCGAAAGGTAGCTAGCTTGTACTGGTCCTaGGGGTCACTACTAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LCQHSLKTKVSSFHRKVASLYWS*GSLLAL Trigger: AAGTGCTAGTAGTGACCCTCAGGACCAGTACAAGCT...AGCTACCTTTCGATGGAAGCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | GAATGTCTTTCTCCAACAGCTTCATGGCCAGCTCCATCTCATGCTTCATGCCAACTCCTCCATCATCAGTaGATGGTACTCATAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ECLSPTASWPAPSHASCQLLHHQ*MVLIEL Trigger: GAGTTCTATGAGTACCATGCACTGATGATGGAGGAG...TTGGCATGAAGCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGAAAGACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCCTCCTCCATCATCAGTaGATGGTACTCATAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QNTPAVCDAKMCVPGIKCLLHHQ*MVLIEL Trigger: GAGTTCTATGAGTACCATGCACTGATGATGGAGGAG...GCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGTTCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTACTGAACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGATTCATCTCAATGTTGATTaGTTTGACTTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLTELRSIHLPLHLSAGIHLNVD*FDFFQL Trigger: CAGCTGGAAGAAGTCAAAGCAATCAACATTGAGATG...AATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTCTTTCTCCAACAGCTTCATGGCCAGCTCCATCTCATGCTTCATGCCAACTTAGGAGCTCCCTCTaGATAATTAAGCAACGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECLSPTASWPAPSHASCQLRSSL*IIKQRK Trigger: CTTGCGTTGCTTAATTATCCAGAGGGAGCTCCTAAG...TTGGCATGAAGCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGAAAGACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCCCTTCACACACAGATTaGCATCAATCACGTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNTPAVCDAKMCVPGIKCPSHTD*HQSRSS Trigger: GCTTGAACGTGATTGATGCCAATCTGTGTGTGAAGG...GCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | ACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCACTGTCTTTTGGTCTAAGATaGCGGCGATTTGAACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: THLLYVMLRCVCQESSALSFGLR*RRFERS Trigger: GGAACGTTCAAATCGCCGCCATCTTAGACCAAAAGA...CAGTGCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | GTTACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTaGTGCTATCACAAGAGGGCGGGAGGATTAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTGSKVSEVGLQ*CYHKRAGGLEN Trigger: GTTTTCTAATCCTCCCGCCCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | ATCCTCGGCTTCTGCTTCCTTTTGCGCCTTCTCTGCTaGCTGCAATCTGGTGTAATTCAAATCAACTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGFCFLLRLLC*LQSGVIQINFG Trigger: CCCAAAGTTGATTTGAATTACACCAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTTGTGCTATCACAAGAGGGTGTCTTGTTTCTCGTaGATGTCTTTCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGSKVSEVGLQLCYHKRVSCFS*MSFSNS Trigger: GCTGTTGGAGAAAGACATTCACGAGAAACAAGACAC...CCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCAACACAGCTTGAAAACAAAGGTTTCTAGCTTCCATCGAAAGGTAGCTAGAAGGAGATGTCTTTaGCCAGCTTGTACTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCQHSLKTKVSSFHRKVARRRCL*PACTGP Trigger: AGGACCAGTACAAGCTGGTCAAAGACATCTCCTTCT...AGCTACCTTTCGATGGAAGCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCATCTCAATGTTGATTaGTTTGACTTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TARPRAKSNSYSSQGWSLHLNVD*FDFFQL Trigger: CAGCTGGAAGAAGTCAAAGCAATCAACATTGAGATG...AAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | CTAAATGGTCATGATTTAAGTAACTTAATGCTCCGTGTCTCCCACACACACCCCAATCTTTGCTCCAGCTaGCTCATGGCTGTAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LNGHDLSNLMLRVSHTHPNLCSS*LMAVVI Trigger: GATCACTACAGCCATGAGGCAGCTGGAGCAAAGATT...GGGGTGTGTGTGGGAGACACGGAGCATTAAGTTACTTAAATCATGACCATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR GCA 90 bp | GATCAGAAAAATACCCAGTCACTGAGCAGTGTTCTTGGGAGTGTAAAATCACTAGCTTGCTGCAATCTTTaGTCCAGCTGCCTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQKNTQSLSSVLGSVKSLACCNL*SSCLMA Trigger: AGCCATGAGGCAGCTGGAGCAAAGATTGCAGCAAGC...TAGTGATTTTACACTCCCAAGAACACTGCTCAGTGACTGGGTATTTTTCTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | AACTCAAGGGACACTAACTCTTCACAGGAAGTCACAAGAGAACTCTTGTATCTTCCATGTTTAACAGGTTaGCTCTCTCCACGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSRDTNSSQEVTRELLYLPCLTG*LSPRLW Trigger: CCACAGCCGTGGAGAGAGCCAACCTGTTAAACATGG...AAGATACAAGAGTTCTCTTGTGACTTCCTGTGAAGAGTTAGTGTCCCTTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCCATCTCATGCTTCATGCCAACTTGTACTGATAGCTCATTCTCCACATCCTTCACACACAGATTaGCATCAATCACGTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAPSHASCQLVLIAHSPHPSHTD*HQSRSS Trigger: GCTTGAACGTGATTGATGCCAATCTGTGTGTGAAGG...ATGTGGAGAATGAGCTATCAGTACAAGTTGGCATGAAGCATGAGATGGAGCTGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTACTGAACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGATTCATTCTTTAAGTACATaGAGAAGTCAATCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLTELRSIHLPLHLSAGIHSLST*RSQSPQ Trigger: TTGGGGTGATTGACTTCTCCATGTACTTAAAGAATG...AATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCTTGTTCTCAAAAAGGCCTCTATAAGGTAAGGCAAATGTGCATTAGCTCTCTCGAAGCTGCCTCCTaGCATCGTTATACATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WPCSQKGLYKVRQMCISSLEAAS*HRYTSR Trigger: ACGAGATGTATAACGATGCCAGGAGGCAGCTTCGAG...AGAGCTAATGCACATTTGCCTTACCTTATAGAGGCCTTTTTGAGAACAAGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCTTGTTCTCAAAAAGGCCTCTATAAGGTAAGGCAAATGTGCATTAGCTCTTCTCCAACAGCTTCATaGCCAGCTCCATCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPCSQKGLYKVRQMCISSSPTAS*PAPSHA Trigger: AGCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGA...AGAGCTAATGCACATTTGCCTTACCTTATAGAGGCCTTTTTGAGAACAAGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | TCCATCCCCAGCACCACATACAAACACTCAACAGCTGTAATCTCAGCAGCTGGGTCACAAAGCTTACAGTaGGTTGCATCTTTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTTYKHSTAVISAAGSQSLQ*VASLSF Trigger: AAAAGACAAAGATGCAACCCACTGTAAGCTTTGTGA...CCCAGCTGCTGAGATTACAGCTGTTGAGTGTTTGTATGTGGTGCTGGGGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR TCA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATATCAGACAATGTTCCATaGCCACGAAGAACTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MESSIRALYGCLTMQSCISDNVP*PRRTAA Trigger: TGCAGCAGTTCTTCGTGGTCATGGAACATTGTCTGA...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTTGTGCTATCACAAGAGGGAATGCTTGTATGTTTaGAGCTCCGTTTCTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGSKVSEVGLQLCYHKRECLYV*SSVSTS Trigger: GGATGTAGAAACGGAGCTTCAAACATACAAGCATTC...CCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGGGTGTGGGTATATGTTTTATCTGTGCCAACACAGCTTGAAAACAAAGGTGCAATTGTCCTAGTCTaGGTTAACAAGTCGTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QRVWVYVLSVPTQLENKGAIVLV*VNKSLS Trigger: CGACAACGACTTGTTAACTCAGACTAGGACAATTGC...ACCTTTGTTTTCAAGCTGTGTTGGCACAGATAAAACATATACCCACACCCGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGGGATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCACTTTTCACCAATaGCACTGCAATTGTCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSGMESSIRALYGCLTMQSTFHQ*HCNCPS Trigger: ACTAGGACAATTGCAGTGTCATTGGTGAAAAGTGCT...TTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCATCCCTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | TACTATCTAAAGTACCTAATACACATAGAGGGTGAAATTCTACTGTGGGCAAGCCTCATCCTCGGCTTCTaGTTCCTTTTGCGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YYLKYLIHIEGEILLWASLILGF*FLLRLL Trigger: GAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGATGAG...GCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | TACTATCTAAAGTACCTAATACACATAGAGGGTGAAATTCTACTGTGGGCAAGCCCATGTTTAACAGGTTaGCTCTCTCCACGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YYLKYLIHIEGEILLWASPCLTG*LSPRLW Trigger: CCACAGCCGTGGAGAGAGCCAACCTGTTAAACATGG...GCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | CTAAATGGTCATGATTTAAGTAACTTAATGCTCCGTGTCTCCCACACACACCCCCCTTCACACACAGATTaGCATCAATCACGTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNGHDLSNLMLRVSHTHPPSHTD*HQSRSS Trigger: GCTTGAACGTGATTGATGCCAATCTGTGTGTGAAGG...GGGGTGTGTGTGGGAGACACGGAGCATTAAGTTACTTAAATCATGACCATTTAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGCCATCTTCAGAGCCCTGCAGCCTTTGATACATCTCAATGTTGATTGCTCTTTTGGTCTAAGATaGCGGCGATTTGAACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQAIFRALQPLIHLNVDCSFGLR*RRFERS Trigger: GGAACGTTCAAATCGCCGCCATCTTAGACCAAAAGA...GCAATCAACATTGAGATGTATCAAAGGCTGCAGGGCTCTGAAGATGGCTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR TCA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATAGTGTCTTGTTTCTCGTaGATGTCTTTCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MESSIRALYGCLTMQSCIVSCFS*MSFSNS Trigger: GCTGTTGGAGAAAGACATTCACGAGAAACAAGACAC...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGGGTGTGGGTATATGTTTTATCTGTGCCAACACAGCTTGAAAACAAAGGTAGCACTTTTCACCAATaGCACTGCAATTGTCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRVWVYVLSVPTQLENKGSTFHQ*HCNCPS Trigger: ACTAGGACAATTGCAGTGTCATTGGTGAAAAGTGCT...ACCTTTGTTTTCAAGCTGTGTTGGCACAGATAAAACATATACCCACACCCGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATACTCCTCCATCATCAGTaGATGGTACTCATAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: MESSIRALYGCLTMQSCILLHHQ*MVLIEL Trigger: GAGTTCTATGAGTACCATGCACTGATGATGGAGGAG...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGTGAAGGAAAAGCTAGAGGCCAGACCACTGGTCCTTTAGTCCACTATATGCCATCTCATGCTTCATaGCAACTTGTACTGATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISEGKARGQTTGPLVHYMPSHAS*QLVLIA Trigger: AGCTATCAGTACAAGTTGGCATGAAGCATGAGATGG...CATATAGTGGACTAAAGGACCAGTGGTCTGGCCTCTAGCTTTTCCTTCACTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CAA 72 bp | CTCAGGGATGGAGTCTTCCATCAGAGCTCTGTACGGTaGCTTAACTATGCAAAGCTGTATATTTATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRDGVFHQSSVR*LNYAKLYIYVC Trigger: ACACACATAAATATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCATCCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | AATTCCTTCTCACAAAGCTTACAGTGGGTTGCATCTTaGTCTTTTAACCAGACCAGTCCCTGTAGTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSFSQSLQWVAS*SFNQTSPCSAL Trigger: CAAAGCACTACAGGGACTGGTCTGGTTAAAAGACAAAGATGCAACCCACTGTAAGCTTTGTGAGAAGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | TACTATCTAAAGTACCTAATACACATAGAGGGTGAAATTCTACTGTGGGCAAGCTCAGACAATGTTCCATaGCCACGAAGAACTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YYLKYLIHIEGEILLWASSDNVP*PRRTAA Trigger: TGCAGCAGTTCTTCGTGGTCATGGAACATTGTCTGA...GCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCTTGTTCTCAAAAAGGCCTCTATAAGGTAAGGCAAATGTGCATTAGCTCTGAATGCTTGTATGTTTaGAGCTCCGTTTCTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: WPCSQKGLYKVRQMCISSECLYV*SSVSTS Trigger: GGATGTAGAAACGGAGCTTCAAACATACAAGCATTC...AGAGCTAATGCACATTTGCCTTACCTTATAGAGGCCTTTTTGAGAACAAGGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR TCA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATAAGCACTTTTCACCAATaGCACTGCAATTGTCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: MESSIRALYGCLTMQSCISTFHQ*HCNCPS Trigger: ACTAGGACAATTGCAGTGTCATTGGTGAAAAGTGCT...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATTACAGAAAATTTCTCCGCAGTTTCTACAGTGGTGCTTTCTTTTGGAGCCATCTCATGCTTCATaGCAACTTGTACTGATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QALQKISPQFLQWCFLLEPSHAS*QLVLIA Trigger: AGCTATCAGTACAAGTTGGCATGAAGCATGAGATGG...CTCCAAAAGAAAGCACCACTGTAGAAACTGCGGAGAAATTTTCTGTAATGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCAACACAGCTTGAAAACAAAGGTTTCTAGCTTCCATCGAAAGGTAGCTCATCTCAATGTTGATTaGTTTGACTTCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCQHSLKTKVSSFHRKVAHLNVD*FDFFQL Trigger: CAGCTGGAAGAAGTCAAAGCAATCAACATTGAGATG...AGCTACCTTTCGATGGAAGCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGTGAAGGAAAAGCTAGAGGCCAGACCACTGGTCCTTTAGTCCACTATATGCAGTTTCTACAGTGGTaGTTTCTTTTGGAGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISEGKARGQTTGPLVHYMQFLQW*FLLESE Trigger: TTCACTCTCCAAAAGAAAGCACCACTGTAGAAACTG...CATATAGTGGACTAAAGGACCAGTGGTCTGGCCTCTAGCTTTTCCTTCACTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | GATCAGAAAAATACCCAGTCACTGAGCAGTGTTCTTGGGAGTGTAAAATCACTACTTAGGAGCTCCCTCTaGATAATTAAGCAACGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DQKNTQSLSSVLGSVKSLLRSSL*IIKQRK Trigger: CTTGCGTTGCTTAATTATCCAGAGGGAGCTCCTAAG...TAGTGATTTTACACTCCCAAGAACACTGCTCAGTGACTGGGTATTTTTCTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTGCGCCTTCTCTGCTTGCTGCAATCTGGTGTAATTCAAATCAACTTTCTTAGGAGCTCCCTCTaGATAATTAAGCAACGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLRLLCLLQSGVIQINFLRSSL*IIKQRK Trigger: CTTGCGTTGCTTAATTATCCAGAGGGAGCTCCTAAG...AAAGTTGATTTGAATTACACCAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR CCA 90 bp | GATCAGAAAAATACCCAGTCACTGAGCAGTGTTCTTGGGAGTGTAAAATCACTATCTTTTGGTCTAAGATaGCGGCGATTTGAACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DQKNTQSLSSVLGSVKSLSFGLR*RRFERS Trigger: GGAACGTTCAAATCGCCGCCATCTTAGACCAAAAGA...TAGTGATTTTACACTCCCAAGAACACTGCTCAGTGACTGGGTATTTTTCTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CAA 72 bp | GGGTGTGGGTATATGTTTTATCTGTGCCAACACAGCTaGAAAACAAAGGTTTCTAGCTTCCATCGAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GCGYMFYLCQHS*KTKVSSFHRKV Trigger: TACCTTTCGATGGAAGCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAGATAAAACATATACCCACACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | GCAGAGTTTGCTGCCAAGTTCTTGCAGAGCTTGTTCTaGTTCCTGATAAATCCTTTTCAACTGCTGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AEFAAKFLQSLF*FLINPFQLLIF Trigger: GAAAATCAGCAGTTGAAAAGGATTTATCAGGAACAAGAACAAGCTCTGCAAGAACTTGGCAGCAAACTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR TCA 90 bp | GATCAGAAAAATACCCAGTCACTGAGCAGTGTTCTTGGGAGTGTAAAATCACTAATCCTTTTCAACTGCTaGTTTTCATCCTGGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DQKNTQSLSSVLGSVKSLILFNC*FSSWRL Trigger: TAACCTCCAGGATGAAAATCAGCAGTTGAAAAGGAT...TAGTGATTTTACACTCCCAAGAACACTGCTCAGTGACTGGGTATTTTTCTGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| 3UTR CAA 72 bp | TTTTTCTTTCAAGCCATCTTCAGAGCCCTGCAGCCTTaGATACATCTCAATGTTGATTGCTTTGACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFFQAIFRALQP*IHLNVDCFDFF Trigger: GAAGAAGTCAAAGCAATCAACATTGAGATGTATCAAAGGCTGCAGGGCTCTGAAGATGGCTTGAAAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| 3UTR CAA 72 bp | TTTAAGTTTCGATTCGCAGAGTTTGCTGCCAAGTTCTaGCAGAGCTTGTTCTTGTTCCTGATAAATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKFRFAEFAAKF*QSLFLFLINPF Trigger: AAAAGGATTTATCAGGAACAAGAACAAGCTCTGCAAGAACTTGGCAGCAAACTCTGCGAATCGAAACTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | TTTATATCGTCTATTTTAAGTTTCGATTCGCAGAGTTaGCTGCCAAGTTCTTGCAGAGCTTGTTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FISSILSFDSQS*LPSSCRACSCS Trigger: GGAACAAGAACAAGCTCTGCAAGAACTTGGCAGCAAACTCTGCGAATCGAAACTTAAAATAGACGATATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| 3UTR CAA 72 bp | AAGAAACATCTAGAAATCTGTCGGAGTGAATTTAAGTaGACCACAGAAGCTGGTAAATACTGGTTTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKHLEICRSEFK*TTEAGKYWFCN Trigger: ATTACAAAACCAGTATTTACCAGCTTCTGTGGTCAACTTAAATTCACTCCGACAGATTTCTAGATGTTTCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAGTGCACGTGAGGAGCCCGCCAGGGCGCCCGCCGTGTCTCACAGCAGCATTTTCACTACGCAATaGATGGTTTTCTTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSAREEPARAPAVSHSSIFTTQ*MVFFLE Trigger: CTCCAAGAAGAAAACCATCAATTGCGTAGTGAAAAT...GCTGCTGTGAGACACGGCGGGCGCCCTGGCGGGCTCCTCACGTGCACTCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCGCCCGCCGTGTCTCACAGCAGCCATGGAGGGTCCCTGCAGCCTGGACATGGAATGCTTGTATGTTaGAAGCTCCGTTTCTACATC | + |
|
Preference number: 5 (lower is better) Translates to: RAPAVSHSSHGGSLQPGHGMLVC*KLRFYI Trigger: GATGTAGAAACGGAGCTTCAAACATACAAGCATTCC...ATGTCCAGGCTGCAGGGACCCTCCATGGCTGCTGTGAGACACGGCGGGCGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS CCA 90 bp | TCACCCCAACCTGGGAGTCTAGGTCCTCTCCCTTCACACACAGATTaGCATCAATCACGTTCAAGCCGACCAGCAGCCCGACAATCACGG | + |
|
Preference number: 5 (lower is better) Translates to: SPQPGSLGPLPSHTD*HQSRSSRPAARQSR Trigger: CCGTGATTGTCGGGCTGCTGGTCGGCTTGAACGTGATTGATGCCAATCTGTGTGTGAAGGGAGAGGACCTAGACTCCCAGGTTGGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000062600.8 ENSMUST00000119567.8 ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGTCACTGTTTGTCCCCAGGCCCAGCTACACTCCTTGCCTCCCTTGGCCATGCCATGTTTAACAGGTaGGCTCTCTCCACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSHCLSPGPATLLASLGHAMFNR*ALSTAV Trigger: CACAGCCGTGGAGAGAGCCAACCTGTTAAACATGGC...ATGGCCAAGGGAGGCAAGGAGTGTAGCTGGGCCTGGGGACAAACAGTGACTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGGTGCCCACGGAGGTCAGAAGCAGGTGTCAGATCCCATGGGACTGGAACTCAGAAGGAGATGTCTTaGACCAGCTTGTACTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWCPRRSEAGVRSHGTGTQKEMS*TSLYWS Trigger: GGACCAGTACAAGCTGGTCAAAGACATCTCCTTCTG...AGTTCCAGTCCCATGGGATCTGACACCTGCTTCTGACCTCCGTGGGCACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTGGCTTCTGCTTCCTTTaGCGCCTTCTCTGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLGFCFL*RLLCLL Trigger: CAGCAAGCAGAGAAGGCGCAAAAGGAAGCAGAAGCC...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTGGGCAGAAGGAGATGTCTTaGACCAGCTTGTACTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RCQIPWDWNWKPHHVGAGQKEMS*TSLYWS Trigger: GGACCAGTACAAGCTGGTCAAAGACATCTCCTTCTG...CCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTGGCCAATGTGTACAAAGTATCAGGGGCTCCATCCCCAGCACCACATACTGCTTGCTGCAATCTTaGCTCCAGCTGCCTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPGQCVQSIRGSIPSTTYCLLQS*LQLPHG Trigger: GCCATGAGGCAGCTGGAGCAAAGATTGCAGCAAGCA...GTATGTGGTGCTGGGGATGGAGCCCCTGATACTTTGTACACATTGGCCAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTGGCCAATGTGTACAAAGTATCAGGGGCTCCATCCCCAGCACCACATACGGCAAAGGCAGCTCGTaGTCAGAGCAGGCATTACAG | + |
|
Preference number: 5 (lower is better) Translates to: VPGQCVQSIRGSIPSTTYGKGSS*SEQALQ Trigger: CTGTAATGCCTGCTCTGACAACGAGCTGCCTTTGCC...GTATGTGGTGCTGGGGATGGAGCCCCTGATACTTTGTACACATTGGCCAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCGCCATGTTTAACAGGTaGGCTCTCTCCACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQGQEQRATATVLRDGVFAMFNR*ALSTAV Trigger: CACAGCCGTGGAGAGAGCCAACCTGTTAAACATGGC...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGTCAGATCCCATGGGACTGGAACTGGAAACCACACCATGTGGGTGCTGGGGACTCGATGAGCCCTTaGATACTCAGTTTAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RCQIPWDWNWKPHHVGAGDSMSP*ILSLAM Trigger: CATGGCTAAACTGAGTATCAAAGGGCTCATCGAGTC...CCCAGCACCCACATGGTGTGGTTTCCAGTTCCAGTCCCATGGGATCTGACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | AGTCACTGTTTGTCCCCAGGCCCAGCTACACTCCTTGCCTCCCTTGGCCATCAACTGCTGACTGTGCTGTaGAGTTGTCTGTTTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHCLSPGPATLLASLGHQLLTVL*SCLFSS Trigger: AGAGCTAAACAGACAACTCAACAGCACAGTCAGCAG...TTGATGGCCAAGGGAGGCAAGGAGTGTAGCTGGGCCTGGGGACAAACAGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCTATTCTTATCTCACACACAGCAGGGGAACTCGTTAGTGCTGCTCCAGAACTGCAGACTGTCGGATaGGCTCAGACACTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSILISHTAGELVSAAPELQTVG*AQTLLG Trigger: GCCCAGGAGTGTCTGAGCCAATCCGACAGTCTGCAG...TTCTGGAGCAGCACTAACGAGTTCCCCTGCTGTGTGTGAGATAAGAATAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTCTGCTGACTGTGCTGTaGAGTTGTCTGTTTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLLLTVL*SCLFSS Trigger: AGAGCTAAACAGACAACTCAACAGCACAGTCAGCAG...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | TCCATCCCCAGCACCACATACAAACACTCAACAGCTGTAATCTCAGCAGCTGGGGACTTCTTCCAGCTGTaGCCGAAGGCCTATGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SIPSTTYKHSTAVISAAGDFFQL*PKAYES Trigger: ACTCTCATAGGCCTTCGGCAACAGCTGGAAGAAGTC...CCCAGCTGCTGAGATTACAGCTGTTGAGTGTTTGTATGTGGTGCTGGGGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTTACTGAACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGATTAGACTCGCACTGGCTTaGGTGAAGAAGGCAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLTELRSIHLPLHLSAGIRLALA*VKKAKA Trigger: TGCCTTTGCCTTCTTCACCAAAGCCAGTGCGAGTCT...AATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTTTTGCTGCCAAGTTCTaGCAGAGCTTGTTCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLFAAKF*QSLFLF Trigger: GAACAAGAACAAGCTCTGCAAGAACTTGGCAGCAAA...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCATCTCATGCTTCATGCCAACTTGTACTGATAGCTCATTCTCCACATCCGCCATGTTTAACAGGTaGGCTCTCTCCACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSISCFMPTCTDSSFSTSAMFNR*ALSTAV Trigger: CACAGCCGTGGAGAGAGCCAACCTGTTAAACATGGC...GGATGTGGAGAATGAGCTATCAGTACAAGTTGGCATGAAGCATGAGATGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCATGCCAACTTGTACTGATAGCTCATTCTCCACATCCTGTCGGAGCTGCGGACTCGATGAGCCCTTaGATACTCAGTTTAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASCQLVLIAHSPHPVGAADSMSP*ILSLAM Trigger: CATGGCTAAACTGAGTATCAAAGGGCTCATCGAGTC...CGCAGCTCCGACAGGATGTGGAGAATGAGCTATCAGTACAAGTTGGCATGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTTACTGAACTCAGATCCATCCACCTGCCTCTGCATCTAAGTGCTGGGATTGACTCGATGAGCCCTTaGATACTCAGTTTAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GLTELRSIHLPLHLSAGIDSMSP*ILSLAM Trigger: CATGGCTAAACTGAGTATCAAAGGGCTCATCGAGTC...AATCCCAGCACTTAGATGCAGAGGCAGGTGGATGGATCTGAGTTCAGTAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCCTGCTGACTGTGCTGTaGAGTTGTCTGTTTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQGQEQRATATVLRDGVFLLTVL*SCLFSS Trigger: AGAGCTAAACAGACAACTCAACAGCACAGTCAGCAG...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTGCTGTAGTGATCTTATaGGTCTTTTCTTCTAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLAVVIL*VFSSSR Trigger: CCGACTAGAAGAAAAGACCAATAAGATCACTACAGC...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTAGTCCCTGTAGTGCTTaGTTGGCTTCTTTTATATCG | + |
|
Preference number: 5 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLSPCSA*LASFIS Trigger: CGATATAAAAGAAGCCAACAAAGCACTACAGGGACT...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | GTTACAGGAAGTAAAGTAAGTGAGGTAGGCCTGCAGTTGTGCTATCACAAGAGGGACTTCTTCCAGCTGTaGCCGAAGGCCTATGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTGSKVSEVGLQLCYHKRDFFQL*PKAYES Trigger: ACTCTCATAGGCCTTCGGCAACAGCTGGAAGAAGTC...CCTCTTGTGATAGCACAACTGCAGGCCTACCTCACTTACTTTACTTCCTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | GAATGTCTTTCTCCAACAGCTTCATGGCCAGCTCCATCTCATGCTTCATGCCAACCCTTCACACACAGATaGGCATCAATCACGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ECLSPTASWPAPSHASCQPFTHR*ASITFK Trigger: CTTGAACGTGATTGATGCCAATCTGTGTGTGAAGGG...TTGGCATGAAGCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGAAAGACATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062600.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCCCCTTCACACACAGATaGGCATCAATCACGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QNTPAVCDAKMCVPGIKCPFTHR*ASITFK Trigger: CTTGAACGTGATTGATGCCAATCTGTGTGTGAAGGG...GCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACAGTCTGGCTGTCCTGACTGGAACTTCCTCTTTCTACCAGGGTGGCCTTATTTTCACTACGCAATaGATGGTTTTCTTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSLAVLTGTSSFYQGGLIFTTQ*MVFFLE Trigger: CTCCAAGAAGAAAACCATCAATTGCGTAGTGAAAAT...AAGGCCACCCTGGTAGAAAGAGGAAGTTCCAGTCAGGACAGCCAGACTGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | TCCATCCCCAGCACCACATACAAACACTCAACAGCTGTAATCTCAGCAGCTGGGGGAATGCTTGTATGTTaGAAGCTCCGTTTCTACATC | + |
|
Preference number: 5 (lower is better) Translates to: SIPSTTYKHSTAVISAAGGMLVC*KLRFYI Trigger: GATGTAGAAACGGAGCTTCAAACATACAAGCATTCC...CCCAGCTGCTGAGATTACAGCTGTTGAGTGTTTGTATGTGGTGCTGGGGATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAAGGCCAAGAGCAAAGAGCAACAGCTACAGTTCTCAGGGATGGAGTCTTCGCTGTAGTGATCTTATaGGTCTTTTCTTCTAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LQGQEQRATATVLRDGVFAVVIL*VFSSSR Trigger: CCGACTAGAAGAAAAGACCAATAAGATCACTACAGC...GAAGACTCCATCCCTGAGAACTGTAGCTGTTGCTCTTTGCTCTTGGCCTTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | ACACCCATGTGTGAAGAAGAGTCAGTCAGGAAGCAGCTTGCTTTTAGTAGTAGGCAGAAGGAGATGTCTTaGACCAGCTTGTACTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPMCEEESVRKQLAFSSRQKEMS*TSLYWS Trigger: GGACCAGTACAAGCTGGTCAAAGACATCTCCTTCTG...CCTACTACTAAAAGCAAGCTGCTTCCTGACTGACTCTTCTTCACACATGGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTGGCCAATGTGTACAAAGTATCAGGGGCTCCATCCCCAGCACCACATACCTTTTGAAGATCTTCTaGCAAAGTCTGTCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VPGQCVQSIRGSIPSTTYLLKIF*QSLSPF Trigger: GAATGGAGACAGACTTTGCAAGAAGATCTTCAAAAG...GTATGTGGTGCTGGGGATGGAGCCCCTGATACTTTGTACACATTGGCCAGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS TCA 90 bp | TCACTACTAGCACTTTTCACCAATGACACTGCAATTGTCCTAGTCTaGGTTAACAAGTCGTTGTCGCTTTGCTCCAGCTGCCTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLALFTNDTAIVLV*VNKSLSLCSSCLMA Trigger: AGCCATGAGGCAGCTGGAGCAAAGCGACAACGACTTGTTAACTCAGACTAGGACAATTGCAGTGTCATTGGTGAAAAGTGCTAGTAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | AACTCAAGGGACACTAACTCTTCACAGGAAGTCACAAGAGAACTCTTGTATCTTGCCATGTTTAACAGGTaGGCTCTCTCCACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSRDTNSSQEVTRELLYLAMFNR*ALSTAV Trigger: CACAGCCGTGGAGAGAGCCAACCTGTTAAACATGGC...AAGATACAAGAGTTCTCTTGTGACTTCCTGTGAAGAGTTAGTGTCCCTTGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATAGACTTCTTCCAGCTGTaGCCGAAGGCCTATGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MESSIRALYGCLTMQSCIDFFQL*PKAYES Trigger: ACTCTCATAGGCCTTCGGCAACAGCTGGAAGAAGTC...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCATTACAGAAAATTTCTCCGCAGTTTCTACAGTGGTGCTTTCTTTTGGAGGACTTCTTCCAGCTGTaGCCGAAGGCCTATGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QALQKISPQFLQWCFLLEDFFQL*PKAYES Trigger: ACTCTCATAGGCCTTCGGCAACAGCTGGAAGAAGTC...CTCCAAAAGAAAGCACCACTGTAGAAACTGCGGAGAAATTTTCTGTAATGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | TACTATCTAAAGTACCTAATACACATAGAGGGTGAAATTCTACTGTGGGCAAGCCAGCTGCACCAGCTGTaGCTCCTTCTGCGAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: YYLKYLIHIEGEILLWASQLHQL*LLLRDL Trigger: CAGATCTCGCAGAAGGAGCAACAGCTGGTGCAGCTG...GCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTGGCCAATGTGTACAAAGTATCAGGGGCTCCATCCCCAGCACCACATACTTGCAGAGCTTGTTCTaGTTCCTGATAAATCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPGQCVQSIRGSIPSTTYLQSLF*FLINPF Trigger: AAAAGGATTTATCAGGAACAAGAACAAGCTCTGCAA...GTATGTGGTGCTGGGGATGGAGCCCCTGATACTTTGTACACATTGGCCAGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCTATTCTTATCTCACACACAGCAGGGGAACTCGTTAGTGCTGCTCCAGAACAGTGGGTTGCATCTTaGTCTTTTAACCAGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSILISHTAGELVSAAPEQWVAS*SFNQTS Trigger: ACTGGTCTGGTTAAAAGACAAAGATGCAACCCACTG...TTCTGGAGCAGCACTAACGAGTTCCCCTGCTGTGTGTGAGATAAGAATAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | TACTATCTAAAGTACCTAATACACATAGAGGGTGAAATTCTACTGTGGGCAAGCGCCATGTTTAACAGGTaGGCTCTCTCCACGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: YYLKYLIHIEGEILLWASAMFNR*ALSTAV Trigger: CACAGCCGTGGAGAGAGCCAACCTGTTAAACATGGC...GCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | ACACACCTGCTGTATGTGATGCTAAGATGTGTGTGCCAGGAATCAAGTGCACTGGCTGTAGTGATCTTATaGGTCTTTTCTTCTAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: THLLYVMLRCVCQESSALAVVIL*VFSSSR Trigger: CCGACTAGAAGAAAAGACCAATAAGATCACTACAGC...CAGTGCACTTGATTCCTGGCACACACATCTTAGCATCACATACAGCAGGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATACTGCTGACTGTGCTGTaGAGTTGTCTGTTTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MESSIRALYGCLTMQSCILLTVL*SCLFSS Trigger: AGAGCTAAACAGACAACTCAACAGCACAGTCAGCAG...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | TACTATCTAAAGTACCTAATACACATAGAGGGTGAAATTCTACTGTGGGCAAGCTTGCGCCTTCTCTGCTaGCTGCAATCTTTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YYLKYLIHIEGEILLWASLRLLC*LQSLLQ Trigger: CTGGAGCAAAGATTGCAGCAAGCAGAGAAGGCGCAA...GCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | AACTCAAGGGACACTAACTCTTCACAGGAAGTCACAAGAGAACTCTTGTATCTTGACTCGATGAGCCCTTaGATACTCAGTTTAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NSRDTNSSQEVTRELLYLDSMSP*ILSLAM Trigger: CATGGCTAAACTGAGTATCAAAGGGCTCATCGAGTC...AAGATACAAGAGTTCTCTTGTGACTTCCTGTGAAGAGTTAGTGTCCCTTGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | AACTCAAGGGACACTAACTCTTCACAGGAAGTCACAAGAGAACTCTTGTATCTTCCCTTCACACACAGATaGGCATCAATCACGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSRDTNSSQEVTRELLYLPFTHR*ASITFK Trigger: CTTGAACGTGATTGATGCCAATCTGTGTGTGAAGGG...AAGATACAAGAGTTCTCTTGTGACTTCCTGTGAAGAGTTAGTGTCCCTTGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCCAACACAGCTTGAAAACAAAGGTTTCTAGCTTCCATCGAAAGGTAGCTGGAATGCTTGTATGTTaGAAGCTCCGTTTCTACATC | + |
|
Preference number: 5 (lower is better) Translates to: LCQHSLKTKVSSFHRKVAGMLVC*KLRFYI Trigger: GATGTAGAAACGGAGCTTCAAACATACAAGCATTCC...AGCTACCTTTCGATGGAAGCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | CAGCGGGTGTGGGTATATGTTTTATCTGTGCCAACACAGCTTGAAAACAAAGGTGGAATGCTTGTATGTTaGAAGCTCCGTTTCTACATC | + |
|
Preference number: 5 (lower is better) Translates to: QRVWVYVLSVPTQLENKGGMLVC*KLRFYI Trigger: GATGTAGAAACGGAGCTTCAAACATACAAGCATTCC...ACCTTTGTTTTCAAGCTGTGTTGGCACAGATAAAACATATACCCACACCCGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | TACTATCTAAAGTACCTAATACACATAGAGGGTGAAATTCTACTGTGGGCAAGCCCCTTCACACACAGATaGGCATCAATCACGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YYLKYLIHIEGEILLWASPFTHR*ASITFK Trigger: CTTGAACGTGATTGATGCCAATCTGTGTGTGAAGGG...GCTTGCCCACAGTAGAATTTCACCCTCTATGTGTATTAGGTACTTTAGATAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGAAGGAAAAGCTAGAGGCCAGACCACTGGTCCTTTAGTCCACTATATGAAAGCTTACAGTGGGTaGCATCTTTGTCTTTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: ISEGKARGQTTGPLVHYMKAYSG*HLCLLT Trigger: GGTTAAAAGACAAAGATGCAACCCACTGTAAGCTTT...CATATAGTGGACTAAAGGACCAGTGGTCTGGCCTCTAGCTTTTCCTTCACTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCCAACACAGCTTGAAAACAAAGGTTTCTAGCTTCCATCGAAAGGTAGCTATTTTCACTACGCAATaGATGGTTTTCTTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCQHSLKTKVSSFHRKVAIFTTQ*MVFFLE Trigger: CTCCAAGAAGAAAACCATCAATTGCGTAGTGAAAAT...AGCTACCTTTCGATGGAAGCTAGAAACCTTTGTTTTCAAGCTGTGTTGGCACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTTGCGCCTTCTCTGCTTGCTGCAATCTGGTGTAATTCAAATCAACTTTGCTGTAGTGATCTTATaGGTCTTTTCTTCTAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FLLRLLCLLQSGVIQINFAVVIL*VFSSSR Trigger: CCGACTAGAAGAAAAGACCAATAAGATCACTACAGC...AAAGTTGATTTGAATTACACCAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143594.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGTCTTCCATCAGAGCTCTGTACGGTTGCTTAACTATGCAAAGCTGTATAATTTTCACTACGCAATaGATGGTTTTCTTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MESSIRALYGCLTMQSCIIFTTQ*MVFFLE Trigger: CTCCAAGAAGAAAACCATCAATTGCGTAGTGAAAAT...TATACAGCTTTGCATAGTTAAGCAACCGTACAGAGCTCTGATGGAAGACTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS CAA 90 bp | GAGTCCAGCGTGCGGCCGAAGCTCAGGGCAGACTCGATGAGCCCTTaGATACTCAGTTTAGCCATGTTTAACAGGTTGGCTCTCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: ESSVRPKLRADSMSP*ILSLAMFNRLALST Trigger: CGTGGAGAGAGCCAACCTGTTAAACATGGCTAAACTGAGTATCAAAGGGCTCATCGAGTCTGCCCTGAGCTTCGGCCGCACGCTGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062600.8 ENSMUST00000119567.8 ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS GCA 72 bp | CTCATCCTCGGCTTCTGCTTCCTTTTGCGCCTTCTCTaGTTGCTGCAATCTTTGCTCCAGCTGCCTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LILGFCFLLRLL*LLQSLLQLPHG Trigger: GCCATGAGGCAGCTGGAGCAAAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS CAA 72 bp | ATCCTCGGCTTCTGCTTCCTTTTGCGCCTTCTCTGCTaGCTGCAATCTTTGCTCCAGCTGCCTCATGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ILGFCFLLRLLC*LQSLLQLPHGC Trigger: ACAGCCATGAGGCAGCTGGAGCAAAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS GCA 72 bp | CCCGACAATCACGGCTCCCTCCTCCTCCATCATCAGTaGATGGTACTCATAGAACTCATTAAGCCCAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PDNHGSLLLHHQ*MVLIELIKPRQ Trigger: TTGCCTGGGCTTAATGAGTTCTATGAGTACCATGCACTGATGATGGAGGAGGAGGGAGCCGTGATTGTCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122231.8 |
||
| CDS CAA 72 bp | GTGCGGCCGAAGCTCAGGGCAGACTCGATGAGCCCTTaGATACTCAGTTTAGCCATGTTTAACAGGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRPKLRADSMSP*ILSLAMFNRLA Trigger: AGCCAACCTGTTAAACATGGCTAAACTGAGTATCAAAGGGCTCATCGAGTCTGCCCTGAGCTTCGGCCGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062600.8 ENSMUST00000119567.8 ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS CAA 72 bp | CTGGGCATATTTCTCATCCTCGGCTTCTGCTTCCTTTaGCGCCTTCTCTGCTTGCTGCAATCTTTGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGIFLILGFCFL*RLLCLLQSLLQ Trigger: CTGGAGCAAAGATTGCAGCAAGCAGAGAAGGCGCAAAAGGAAGCAGAAGCCGAGGATGAGAAATATGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS GCA 72 bp | TGCGCCTTCTCTGCTTGCTGCAATCTTTGCTCCAGCTaGCTCATGGCTGTAGTGATCTTATTGGTCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CAFSACCNLCSS*LMAVVILLVFS Trigger: AGAAAAGACCAATAAGATCACTACAGCCATGAGGCAGCTGGAGCAAAGATTGCAGCAAGCAGAGAAGGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119567.8 |
||
| CDS TCA 72 bp | GCACTTTTCACCAATGACACTGCAATTGTCCTAGTCTaGGTTAACAAGTCGTTGTCGCTTTGCTCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALFTNDTAIVLV*VNKSLSLCSSC Trigger: GCAGCTGGAGCAAAGCGACAACGACTTGTTAACTCAGACTAGGACAATTGCAGTGTCATTGGTGAAAAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS TCA 72 bp | CAGAAGGAGATGTCTTTGACCAGCTTGTACTGGTCCTaGGGGTCACTACTAGCACTTTTCACCAATGACACT | + |
|
Preference number: 6 (lower is better) Translates to: QKEMSLTSLYWS*GSLLALFTNDT Trigger: AGTGTCATTGGTGAAAAGTGCTAGTAGTGACCCTCAGGACCAGTACAAGCTGGTCAAAGACATCTCCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||
| CDS CCA 72 bp | CCTTGTTTCCGATCTCTTCTTCATTCTTTAAGTACATaGAGAAGTCAATCACCCCAACCTGGGAGTCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PCFRSLLHSLST*RSQSPQPGSLG Trigger: ACCTAGACTCCCAGGTTGGGGTGATTGACTTCTCCATGTACTTAAAGAATGAAGAAGAGATCGGAAACAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000062600.8 ENSMUST00000119567.8 ENSMUST00000122231.8 ENSMUST00000131718.8 ENSMUST00000143594.8 |
||