Pregenerated sensors for RUFY1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020375Ensembl transcript IDs: ENSMUST00000020643.4
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTGACAGTAGGTGTTGGCAGGAGCATGATGGCAAATGCTGGATaGCGAAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: GLTVGVGRSMMANAG*RSRQGTLTDPQGSK Trigger: CTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCGGCATCCAGCATTTGCCATCATGCTCCTGCCAACACCTACTGTCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR GCA 90 bp | TATTGCAGGGCTGACAGTAGGTGTTGGCAGGAGCATGATGGCAAATaGTGGATGCCGAAGCAGACAAGGCACACTGACAGACCCACAAGG | + |
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Preference number: 1 (lower is better) Translates to: YCRADSRCWQEHDGK*WMPKQTRHTDRPTR Trigger: CCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCGGCATCCAGCATTTGCCATCATGCTCCTGCCAACACCTACTGTCAGCCCTGCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR GCA 90 bp | AAGTGTCTGTCTAGAGGAGATGACTCCATAGAGACCATGGAAAAGTaGTCAGCTGCCACTTGGCATTCTCTTCCGAGGCTGACAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: KCLSRGDDSIETMEK*SAATWHSLPRLTAW Trigger: CCAGGCTGTCAGCCTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATGGTCTCTATGGAGTCATCTCCTCTAGACAGACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR TCA 90 bp | CCATGGAAAAGTGCTCAGCTGCCACTTGGCATTCTCTTCCGAGGCTaGCAGCCTGGTGAAGGTTTCATTCTTTCCTTTGATTCTCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: PWKSAQLPLGILFRG*QPGEGFILSFDSLG Trigger: CCCAAGAGAATCAAAGGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CCA 90 bp | AGAGTGAAAAATAAAGGATTTTATTGCAGGGCTGACAGTAGGTGTTaGCAGGAGCATGATGGCAAATGCTGGATGCCGAAGCAGACAAGG | + |
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Preference number: 1 (lower is better) Translates to: RVKNKGFYCRADSRC*QEHDGKCWMPKQTR Trigger: CCTTGTCTGCTTCGGCATCCAGCATTTGCCATCATGCTCCTGCCAACACCTACTGTCAGCCCTGCAATAAAATCCTTTATTTTTCACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR-3UTR TCA 90 bp | CGAAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATGGCTTTCCTCCACTCTaGGGATGGAGGTCAACAGGT | + |
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Preference number: 2 (lower is better) Translates to: RSRQGTLTDPQGSKHSRNGFPPL*GWRSTG Trigger: ACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCC...ATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR-3UTR GCA 90 bp | GGTAGGAAAGAGAAAGGATTCTCTAGTGCAACTGCTGCACAACAGGTTAACCCTACAGGTCAAGGTCCCTaGTGGTGGGTGGGGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: GRKEKGFSSATAAQQVNPTGQGP*WWVGLM Trigger: CATCAGCCCCACCCACCAGCAGGGACCTTGACCTGT...AGGGTTAACCTGTTGTGCAGCAGTTGCACTAGAGAATCCTTTCTCTTTCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CAA 90 bp | GAGGCTGACAGCCTGGTGAAGGTTTCATTCTTTCCTTTGATTCTCTaGGGTCCCTACAGGTCTCTGGAGATCCCAAGTTTGGCACTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: EADSLVKVSFFPLIL*GPYRSLEIPSLALY Trigger: GTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGGACCCAAGAGAATCAAAGGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CAA 90 bp | TTCTCTTCCGAGGCTGACAGCCTGGTGAAGGTTTCATTCTTTCCTTaGATTCTCTTGGGTCCCTACAGGTCTCTGGAGATCCCAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: FSSEADSLVKVSFFP*ILLGPYRSLEIPSL Trigger: CAAACTTGGGATCTCCAGAGACCTGTAGGGACCCAAGAGAATCAAAGGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR-3UTR CCA 90 bp | CGAAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATGGTTTCTGTGGGACGTaGGTAGGAAAGAGAAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: RSRQGTLTDPQGSKHSRNGFCGT*VGKRKD Trigger: ATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACC...ATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CAA 90 bp | GAGAAAGGATTCTCTAGTGCAACTGCTGCACAACAGGTTAACCCTTaGAAAAGTGAAGGTGACAGTAGCAAAGTCATGAAGTTGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: EKGFSSATAAQQVNP*KSEGDSSKVMKLHL Trigger: CAGGTGCAACTTCATGACTTTGCTACTGTCACCTTCACTTTTCAAAGGGTTAACCTGTTGTGCAGCAGTTGCACTAGAGAATCCTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CCA 72 bp | GACAGTAGGTGTTGGCAGGAGCATGATGGCAAATGCTaGATGCCGAAGCAGACAAGGCACACTGACAGACCC | + |
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Preference number: 3 (lower is better) Translates to: DSRCWQEHDGKC*MPKQTRHTDRP Trigger: GGGTCTGTCAGTGTGCCTTGTCTGCTTCGGCATCCAGCATTTGCCATCATGCTCCTGCCAACACCTACTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR GCA 72 bp | GTAGGTGTTGGCAGGAGCATGATGGCAAATGCTGGATaGCGAAGCAGACAAGGCACACTGACAGACCCACAA | + |
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Preference number: 3 (lower is better) Translates to: VGVGRSMMANAG*RSRQGTLTDPQ Trigger: TTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCGGCATCCAGCATTTGCCATCATGCTCCTGCCAACACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR GCA 72 bp | GCTGACAGTAGGTGTTGGCAGGAGCATGATGGCAAATaGTGGATGCCGAAGCAGACAAGGCACACTGACAGA | + |
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Preference number: 3 (lower is better) Translates to: ADSRCWQEHDGK*WMPKQTRHTDR Trigger: TCTGTCAGTGTGCCTTGTCTGCTTCGGCATCCAGCATTTGCCATCATGCTCCTGCCAACACCTACTGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR TCA 72 bp | TGGCAAATGCTGGATGCCGAAGCAGACAAGGCACACTaGCAGACCCACAAGGTTCAAAGCACAGCAGAAATC | + |
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Preference number: 3 (lower is better) Translates to: WQMLDAEADKAH*QTHKVQSTAEI Trigger: GATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCGGCATCCAGCATTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR GCA 72 bp | TCTAGAGGAGATGACTCCATAGAGACCATGGAAAAGTaGTCAGCTGCCACTTGGCATTCTCTTCCGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SRGDDSIETMEK*SAATWHSLPRL Trigger: CAGCCTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATGGTCTCTATGGAGTCATCTCCTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR TCA 72 bp | AGTGCTCAGCTGCCACTTGGCATTCTCTTCCGAGGCTaGCAGCCTGGTGAAGGTTTCATTCTTTCCTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: SAQLPLGILFRG*QPGEGFILSFD Trigger: ATCAAAGGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CCA 72 bp | TCAAAGCACAGCAGAAATCAAGGTTTCTGTGGGACGTaGGTAGGAAAGAGAAAGGATTCTCTAGTGCAACTG | + |
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Preference number: 3 (lower is better) Translates to: SKHSRNQGFCGT*VGKRKDSLVQL Trigger: CAGTTGCACTAGAGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTTCTGCTGTGCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CCA 72 bp | ACAAGGTTCAAAGCACAGCAGAAATCAAGGTTTCTGTaGGACGTGGGTAGGAAAGAGAAAGGATTCTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: TRFKAQQKSRFL*DVGRKEKGFSS Trigger: ACTAGAGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTTCTGCTGTGCTTTGAACCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGGTGGGTGCGCCAGCGTCAGGATaGGCGCCGACCAGCTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LSSTLRMEVNRSRSLLVGAPASG*APTSCR Trigger: CCGACAGCTGGTCGGCGCCCATCCTGACGCTGGCGC...ACCCACCAGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | ATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCTGGGACAGCTGGAGCTaGAGGGCACTGCCCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: IPSLALYLRLSSTLRMEVWDSWS*RALPLP Trigger: CGGGAGGGGCAGTGCCCTGCAGCTCCAGCTGTCCCA...GACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | TCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATCCGACAGGTTCCCGGTaGCTCTGCGCGCCAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: SGDPKFGTVPEAFLHSEDPTGSR*LCAPAS Trigger: TGACGCTGGCGCGCAGAGCCACCGGGAACCTGTCGG...ATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | TGCCACTTGGCATTCTCTTCCGAGGCTGACAGCCTGGTGAAGGTTTCATTCTTTGGTTCCCGGTGGCTCTaGGCGCCAGCGTCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: CHLAFSSEADSLVKVSFFGSRWL*APASGW Trigger: CCATCCTGACGCTGGCGCGCAGAGCCACCGGGAACC...AAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAATGCCAAGTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | AGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGACTTCCTCCAGCTGCTaGCGGAGGGCAACGAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: SLALYLRLSSTLRMEVNRTSSSC*RRATSV Trigger: CACGCTCGTTGCCCTCCGCCAGCAGCTGGAGGAAGT...CCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | AAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATCACCGGGACTCGGCAGCTaGCTCCGGTCCACGATCTCG | + |
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Preference number: 4 (lower is better) Translates to: KQTRHTDRPTRFKAQQKSPGLGS*LRSTIS Trigger: CGAGATCGTGGACCGGAGCCAGCTGCCGAGTCCCGG...TGATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR TCA 90 bp | CGAAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATCACTGCCCCTCCCGCTaGGCTCCTGCTGCAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: RSRQGTLTDPQGSKHSRNHCPSR*APAATC Trigger: ACAAGTTGCAGCAGGAGCTCAGCGGGAGGGGCAGTG...ATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | ATGCCGAAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGCAAGGGGGCATAGTCTaGATCCAGACTGCGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: MPKQTRHTDRPTRFKAQQQGGIV*IQTASQ Trigger: CTGGGACGCAGTCTGGATGCAGACTATGCCCCCTTG...CTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCGGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | CCCTACAGGTCTCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCGATAAAGCCACGCTCTaGCTCTTCCCACGGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PYRSLEIPSLALYLRLSSDKATL*LFPRLS Trigger: AGACAGCCGTGGGAAGAGGCAGAGCGTGGCTTTATC...GGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | TCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATTTGACTTCCTCCAGCTaGTGGCGGAGGGCAACGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGDPKFGTVPEAFLHSEDLTSSS*WRRATS Trigger: GCTCGTTGCCCTCCGCCAGCAGCTGGAGGAAGTCAA...ATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | ATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCTTCAGGCCTTCCACTTaGTGCAGCTCCGTCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IPSLALYLRLSSTLRMEVFRPST*CSSVWS Trigger: GCTCCAGACGGAGCTGCAGCAAGTGGAAGGCCTGAA...GACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | ATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCTGGAGGGCTTGCTCCTaGTCCTCACAGACCTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: IPSLALYLRLSSTLRMEVWRACS*SSQTFR Trigger: ACGGAAGGTCTGTGAGGAGCAGGAGCAAGCCCTCCA...GACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | TCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGTGGAGGAGCAGCGCTaGAGTAGCAGGGTATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SGDPKFGTVPEAFLHSEDVEEQR*SSRVWQ Trigger: CTGCCATACCCTGCTACTGCAGCGCTGCTCCTCCAC...ATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CAA 72 bp | CTCTTGGGTCCCTACAGGTCTCTGGAGATCCCAAGTTaGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLGPYRSLEIPS*ALYLRLSSTLR Trigger: CCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGGACCCAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | CCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGCTGTCAAGATCCTGTaGGTCCTTCAGACAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PEAFLHSEDGGQQVKVPAAVKIL*VLQTER Trigger: TCTCTCTGTCTGAAGGACGCACAGGATCTTGACAGC...AGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | ATAGAGACCATGGAAAAGTGCTCAGCTGCCACTTGGCATTCTCTTCCGAGGCTGCCGCTGAGCTCCTGCTaGAACTTGTGGCTTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: IETMEKCSAATWHSLPRLPLSSC*NLWLRS Trigger: AGAGCGAAGCCACAAGTTGCAGCAGGAGCTCAGCGG...CAGCCTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATGGTCTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | AGGTCTCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGATTTCCTGGAGGGCTTaGTCCTGCTCCTCACAGACC | + |
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Preference number: 4 (lower is better) Translates to: RSLEIPSLALYLRLSSTLISWRA*SCSSQT Trigger: GGTCTGTGAGGAGCAGGAGCAAGCCCTCCAGGAAAT...CAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | GCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGGTGGGTCATGTGCATTAGGTTaGCACGCTCCTCCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: AFLHSEDGGQQVKVPAGGSCALG*HAPPSS Trigger: AGATGATGGAGGAGCGTGCCAACCTAATGCACATGA...CCCACCAGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGGTGGGTGTGTCTTGCTTCTCATaGGTGTCCTTCTCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LSSTLRMEVNRSRSLLVGVSCFS*VSFSSN Trigger: GTTGCTGGAGAAGGACACCCATGAGAAGCAAGACAC...ACCCACCAGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| 3UTR CAA 72 bp | CTCCATAGAGACCATGGAAAAGTGCTCAGCTGCCACTaGGCATTCTCTTCCGAGGCTGACAGCCTGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LHRDHGKVLSCH*AFSSEADSLVK Trigger: CTTCACCAGGCTGTCAGCCTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATGGTCTCTATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | CACAGCAGAAATCAAGGTTTCTGTGGGACGTGGGTAGGAAAGAGAAAGGATTCTCCATCATCTGGCCTTTaGAAGCTGCGCGCTCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: HSRNQGFCGTWVGKRKDSPSSGL*KLRAPR Trigger: GCGGGGAGCGCGCAGCTTCCAAAGGCCAGATGATGG...AGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTTCTGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | ACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATCAAGGTTTCATTGGTCCCGCAGCTaGGACAGCTGGAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TRHTDRPTRFKAQQKSRFHWSRS*DSWSCR Trigger: CCTGCAGCTCCAGCTGTCCCAGCTGCGGGACCAATG...AAACCTTGATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR TCA 90 bp | CTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGGTGGGTCTCTTCTTGAAGCTTTaGGTTCGTCTTTTCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LSSTLRMEVNRSRSLLVGLFLKL*VRLFQA Trigger: GGCTTGGAAAAGACGAACTCAAAGCTTCAAGAAGAG...ACCCACCAGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | AGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGCCTCCATTTGCTTCATaGTGGACATCACCTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLALYLRLSSTLRMEVNRPPFAS*WTSPEW Trigger: CCACTCAGGTGATGTCCAGCATGAAGCAAATGGAGG...CCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | GCATTCTCTTCCGAGGCTGACAGCCTGGTGAAGGTTTCATTCTTTCCTTTGATTCGCTCCTCCATCATCTaGCCTTTGGAAGCTGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: AFSSEADSLVKVSFFPLIRSSII*PLEAAR Trigger: GCGCGCAGCTTCCAAAGGCCAGATGATGGAGGAGCG...AATCAAAGGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR TCA 90 bp | ATAGAGACCATGGAAAAGTGCTCAGCTGCCACTTGGCATTCTCTTCCGAGGCTGCCATCTATCTTCGTCTaGAGATCCCCAACTGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IETMEKCSAATWHSLPRLPSIFV*RSPTVQ Trigger: CTGCACAGTTGGGGATCTTCAGACGAAGATAGATGG...CAGCCTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATGGTCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR GCA 90 bp | CGAAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATGCAACGAGCGTGTCTTaGTTCTCATGGGTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RSRQGTLTDPQGSKHSRNATSVS*FSWVSF Trigger: GAAGGACACCCATGAGAAGCAAGACACGCTCGTTGC...ATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | GGTAGGAAAGAGAAAGGATTCTCTAGTGCAACTGCTGCACAACAGGTTAACCCTTCCTGCTGCAACTTGTaGCTTCGCTCTTCTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GRKEKGFSSATAAQQVNPSCCNL*LRSSAA Trigger: GGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGA...AGGGTTAACCTGTTGTGCAGCAGTTGCACTAGAGAATCCTTTCTCTTTCCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGAAATCAAGGTTTCTGTGGGACGTGGGTAGGAAAGAGAAAGGATTCTCTTCTGCCTTCTCGTCTTaGAGCTCCCGCAGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQKSRFLWDVGRKEKGFSSAFSS*SSRSSF Trigger: GAAGGAGCTGCGGGAGCTCCAAGACGAGAAGGCAGA...AGAGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTTCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CCA 90 bp | ACACAGAAGTGTCTGTCTAGAGGAGATGACTCCATAGAGACCATGGAAAAGTGCGTCACACACACGCACTaGCTTAGGGTAGGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQKCLSRGDDSIETMEKCVTHTH*LRVGGQ Trigger: CTGCCCTCCTACCCTAAGCCAGTGCGTGTGTGTGAC...GCACTTTTCCATGGTCTCTATGGAGTCATCTCCTCTAGACAGACACTTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGCAAAGTCATGAAGTTGCACCTGTACCAAAGCCAGGATTTAACTGAGGACTGGCATCCAGAACGTTaGGTCCCACCAGCAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKVMKLHLYQSQDLTEDWHPER*VPPADP Trigger: TGGGTCTGCTGGTGGGACTCAACGTTCTGGATGCCA...GTCCTCAGTTAAATCCTGGCTTTGGTACAGGTGCAACTTCATGACTTTGCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR GCA 90 bp | AGGTCTCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGTCGGTAATTCTTTCATaGTCTCTGCCGCTGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSLEIPSLALYLRLSSTLSVILS*SLPLSR Trigger: TCTTGACAGCGGCAGAGAGCATGAAAGAATTACCGA...CAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTTCTCCAGTTCAACCTTaGTGTCCTGTTTTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PEAFLHSEDGGQQVKVPASPVQP*CPVLLS Trigger: AGATAACAAAACAGGACACCAAGGTTGAACTGGAGA...AGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTTGGACATCACCTGAGTaGTTTTTCCTTCAAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PEAFLHSEDGGQQVKVPAWTSPE*FFLQKM Trigger: CATCTTTTGAAGGAAAAACCACTCAGGTGATGTCCA...AGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| 3UTR CAA 72 bp | GAGGCTGACAGCCTGGTGAAGGTTTCATTCTTTCCTTaGATTCTCTTGGGTCCCTACAGGTCTCTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: EADSLVKVSFFP*ILLGPYRSLEI Trigger: GATCTCCAGAGACCTGTAGGGACCCAAGAGAATCAAAGGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR GCA 90 bp | ATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCATGGCTTCATTCTTCTaGTGTAAACTGCTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPSLALYLRLSSTLRMEVMASFF*CKLLSA Trigger: TGCAGAGAGCAGTTTACAGCAGAAGAATGAAGCCAT...GACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CCA 90 bp | AAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATCATCTCCAGCAACTTCATaGCGATCTCCATCTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQTRHTDRPTRFKAQQKSSPATS*RSPSPS Trigger: AGACGGAGATGGAGATCGCCATGAAGTTGCTGGAGA...TGATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR TCA 90 bp | AAATCAAGGTTTCTGTGGGACGTGGGTAGGAAAGAGAAAGGATTCTCTAGTGCATCAATCACCCCGACCTaGGAATCCAAGTCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSRFLWDVGRKEKGFSSASITPT*ESKSSP Trigger: GGGAGAAGACTTGGATTCTCAGGTCGGGGTGATTGA...TGCACTAGAGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR GCA 90 bp | AAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATCACTGAGTTTCATCATGTaGATTAGGTTGGCACGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQTRHTDRPTRFKAQQKSLSFIM*IRLARS Trigger: GGAGCGTGCCAACCTAATGCACATGATGAAACTCAG...TGATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR GCA 90 bp | CTCCATAGAGACCATGGAAAAGTGCTCAGCTGCCACTTGGCATTCTCTTCCGAGCCATGTTTGAGGCAATaGTCCATCACTACAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHRDHGKVLSCHLAFSSEPCLRQ*SITTKN Trigger: GTTCTTTGTAGTGATGGAGCATTGCCTCAAACATGG...CTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATGGTCTCTATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR GCA 90 bp | CTCCATAGAGACCATGGAAAAGTGCTCAGCTGCCACTTGGCATTCTCTTCCGAGCTGCTTACAATGTGTTaGCTCGTCATCTTTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRDHGKVLSCHLAFSSELLTMC*LVIFQP Trigger: TGGTTGAAAGATGACGAGGCAACACATTGTAAGCAG...CTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATGGTCTCTATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR GCA 90 bp | ATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCTTTTCCTTCAAAAGATaGGATGGCTTCATTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSLALYLRLSSTLRMEVFSFKR*DGFILL Trigger: CAGAAGAATGAAGCCATCGCATCTTTTGAAGGAAAA...GACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CCA 90 bp | GCATTCTCTTCCGAGGCTGACAGCCTGGTGAAGGTTTCATTCTTTCCTTTGATTGCTTCCTCCGAGAAATaGAGAAGTCCTTCTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: AFSSEADSLVKVSFFPLIASSEK*RSPSHT Trigger: AGTGTGAGAAGGACTTCTCCATTTCTCGGAGGAAGC...AATCAAAGGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR TCA 90 bp | CGAAGCAGACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATACTGGTAGCTATATCTaGTGCTTCAGGACAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSRQGTLTDPQGSKHSRNTGSYI*CFRTKF Trigger: AAACTTTGTCCTGAAGCATCAGATATAGCTACCAGT...ATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGTCTGCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR TCA 90 bp | CACAGCAGAAATCAAGGTTTCTGTGGGACGTGGGTAGGAAAGAGAAAGGATTCTGCTGCTTGTTGTCTATaGGGACTTTCAGATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSRNQGFCGTWVGKRKDSAACCL*GLSDNL Trigger: CAGATTATCTGAAAGTCCTCATAGACAACAAGCAGC...AGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTTCTGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGGAAAGAGAAAGGATTCTCTAGTGCAACTGCTGCACAACAGGTTAACCTCTTTCAACCATGTGTaGCCCTTCAGTGCCTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: WVGKRKDSLVQLLHNRLTSFNHV*PFSALF Trigger: AAATAAGGCACTGAAGGGCCACACATGGTTGAAAGA...GGTTAACCTGTTGTGCAGCAGTTGCACTAGAGAATCCTTTCTCTTTCCTACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR TCA 90 bp | AGAAATCAAGGTTTCTGTGGGACGTGGGTAGGAAAGAGAAAGGATTCTCTAGTGGCTGAAAGCTCTTCTTaGAGCTTTGAGTTCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RNQGFCGTWVGKRKDSLVAESSS*SFEFVF Trigger: AAAGACGAACTCAAAGCTTCAAGAAGAGCTTTCAGC...CACTAGAGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR TCA 90 bp | ACAAGAGTGAAAAATAAAGGATTTTATTGCAGGGCTGACAGTAGGTGTTGGCAGTCGGTCTGTTGCAGCTaGAAGCTCTTCTTGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRVKNKGFYCRADSRCWQSVCCS*KLFLKL Trigger: AAGCTTCAAGAAGAGCTTTCAGCTGCAACAGACCGA...CTGCCAACACCTACTGTCAGCCCTGCAATAAAATCCTTTATTTTTCACTCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| 3UTR CAA 72 bp | TTGAAAAGTGAAGGTGACAGTAGCAAAGTCATGAAGTaGCACCTGTACCAAAGCCAGGATTTAACTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKSEGDSSKVMK*HLYQSQDLTED Trigger: GTCCTCAGTTAAATCCTGGCTTTGGTACAGGTGCAACTTCATGACTTTGCTACTGTCACCTTCACTTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| 3UTR CAA 72 bp | TTCTCTAGTGCAACTGCTGCACAACAGGTTAACCCTTaGAAAAGTGAAGGTGACAGTAGCAAAGTCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSATAAQQVNP*KSEGDSSKVMK Trigger: CTTCATGACTTTGCTACTGTCACCTTCACTTTTCAAAGGGTTAACCTGTTGTGCAGCAGTTGCACTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR GCA 90 bp | GGTAGGAAAGAGAAAGGATTCTCTAGTGCAACTGCTGCACAACAGGTTAACCCTGACTTTCAGATAATCTaGCAGTTTCTTTTGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRKEKGFSSATAAQQVNPDFQII*QFLLHE Trigger: CTCATGCAAAAGAAACTGGCAGATTATCTGAAAGTC...AGGGTTAACCTGTTGTGCAGCAGTTGCACTAGAGAATCCTTTCTCTTTCCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CCA 90 bp | CGGCCGCGCGCAGCGCGCTGCCGCAGCTCGCCGACAGGTTCCCGGTaGCTCTGCGCGCCAGCGTCAGGATGGGCGCCGACCAGCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPRAARCRSSPTGSR*LCAPASGWAPTSCR Trigger: CCGACAGCTGGTCGGCGCCCATCCTGACGCTGGCGCGCAGAGCCACCGGGAACCTGTCGGCGAGCTGCGGCAGCGCGCTGCGCGCGGCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | CGCGCAGCGCGCTGCCGCAGCTCGCCGACAGGTTCCCGGTGGCTCTaGGCGCCAGCGTCAGGATGGGCGCCGACCAGCTGTCGGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RAARCRSSPTGSRWL*APASGWAPTSCRPL Trigger: GAGTGGCCGACAGCTGGTCGGCGCCCATCCTGACGCTGGCGCGCAGAGCCACCGGGAACCTGTCGGCGAGCTGCGGCAGCGCGCTGCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CCA 90 bp | CTCCGGTCCACGATCTCGAACGCTTCCCCGGACTCTAGGCCTGCTTaGGGCTCAGGCTCCGGCCCCGGCTCGGACTCCGGCTCCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRSTISNASPDSRPA*GSGSGPGSDSGSRS Trigger: GGAGCGGGAGCCGGAGTCCGAGCCGGGGCCGGAGCCTGAGCCCCAAGCAGGCCTAGAGTCCGGGGAAGCGTTCGAGATCGTGGACCGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CCA 90 bp | ACTCGAGGCCGCGACGCACTCCGCAGCTCGCCGGGACTCGGCAGCTaGCTCCGGTCCACGATCTCGAACGCTTCCCCGGACTCTAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRGRDALRSSPGLGS*LRSTISNASPDSRP Trigger: AGGCCTAGAGTCCGGGGAAGCGTTCGAGATCGTGGACCGGAGCCAGCTGCCGAGTCCCGGCGAGCTGCGGAGTGCGTCGCGGCCTCGAGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS TCA 90 bp | CCCGCAGCTGGGACAGCTGGAGCTGCAGGGCACTGCCCCTCCCGCTaGGCTCCTGCTGCAACTTGTGGCTTCGCTCTTCTGCCGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAAGTAGAAGHCPSR*APAATCGFALLPPA Trigger: GGCAGGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGAGCTCAGCGGGAGGGGCAGTGCCCTGCAGCTCCAGCTGTCCCAGCTGCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | GACAGCTGGAGCTGCAGGGCACTGCCCCTCCCGCTGAGCTCCTGCTaGAACTTGTGGCTTCGCTCTTCTGCCGCCTGCCTGGCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSWSCRALPLPLSSC*NLWLRSSAACLARS Trigger: GGAACGGGCCAGGCAGGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGAGCTCAGCGGGAGGGGCAGTGCCCTGCAGCTCCAGCTGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | TGGGACAGCTGGAGCTGCAGGGCACTGCCCCTCCCGCTGAGCTCCTaGTGCAACTTGTGGCTTCGCTCTTCTGCCGCCTGCCTGGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: WDSWSCRALPLPLSS*CNLWLRSSAACLAR Trigger: ACGGGCCAGGCAGGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGAGCTCAGCGGGAGGGGCAGTGCCCTGCAGCTCCAGCTGTCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | TTCTCTAGACCTGAGCATTGGTCCCGCAGCTGGGACAGCTGGAGCTaGAGGGCACTGCCCCTCCCGCTGAGCTCCTGCTGCAACTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSRPEHWSRSWDSWS*RALPLPLSSCCNLW Trigger: CCACAAGTTGCAGCAGGAGCTCAGCGGGAGGGGCAGTGCCCTGCAGCTCCAGCTGTCCCAGCTGCGGGACCAATGCTCAGGTCTAGAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CCA 90 bp | AGTTCTTTCTCTAGACCTGAGCATTGGTCCCGCAGCTGGGACAGCTaGAGCTGCAGGGCACTGCCCCTCCCGCTGAGCTCCTGCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSFSRPEHWSRSWDS*SCRALPLPLSSCCN Trigger: GTTGCAGCAGGAGCTCAGCGGGAGGGGCAGTGCCCTGCAGCTCCAGCTGTCCCAGCTGCGGGACCAATGCTCAGGTCTAGAGAAAGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | CCGCTGAGCTCCTGCTGCAACTTGTGGCTTCGCTCTTCTGCCGCCTaGCTGGCCCGTTCCGCCTGCTGTAACCTTTCCTCCATTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLSSCCNLWLRSSAA*LARSACCNLSSICF Trigger: GAAGCAAATGGAGGAAAGGTTACAGCAGGCGGAACGGGCCAGGCAGGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGAGCTCAGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CCA 90 bp | TCTGACTTCAGTTCTTTCTCTAGACCTGAGCATTGGTCCCGCAGCTaGGACAGCTGGAGCTGCAGGGCACTGCCCCTCCCGCTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDFSSFSRPEHWSRS*DSWSCRALPLPLSS Trigger: GGAGCTCAGCGGGAGGGGCAGTGCCCTGCAGCTCCAGCTGTCCCAGCTGCGGGACCAATGCTCAGGTCTAGAGAAAGAACTGAAGTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | CCCTACAGGTCTCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCTCCATCATCTGGCCTTaGGAAGCTGCGCGCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PYRSLEIPSLALYLRLSSSIIWP*EAARSP Trigger: CGGGGAGCGCGCAGCTTCCAAAGGCCAGATGATGGA...GGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | TCGTCTTGGAGCTCCCGCAGCTCCTTCTTCAGGCCTTCCACTTGCTaGAGCTCCGTCTGGAGCAGACAAGAGGTGTCTTTCTCACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSWSSRSSFFRPSTC*SSVWSRQEVSFSRC Trigger: ACAGCGTGAGAAAGACACCTCTTGTCTGCTCCAGACGGAGCTGCAGCAAGTGGAAGGCCTGAAGAAGGAGCTGCGGGAGCTCCAAGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CCA 90 bp | GAGGGCAGGGCCAGCTCGTTGCTAGAGCAGGTGTTGCAGAAAATGTaGCCACAGTTTCGGCAGTGGTGCTTCCTCCGAGAAATGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGRASSLLEQVLQKM*PQFRQWCFLREMEK Trigger: CTTCTCCATTTCTCGGAGGAAGCACCACTGCCGAAACTGTGGCCACATTTTCTGCAACACCTGCTCTAGCAACGAGCTGGCCCTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | CCCTACAGGTCTCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCTTGGCATCCAGAACGTaGAGTCCCACCAGCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PYRSLEIPSLALYLRLSSLASRT*SPTSRP Trigger: GGGTCTGCTGGTGGGACTCAACGTTCTGGATGCCAA...GGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | TTGGACTGGCTAAGGTGTAGTCCCATTTCCTGGAGGGCTTGCTCCTaGTCCTCACAGACCTTCCGTAACTCTGCCTTCTCGTCTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LDWLRCSPISWRACS*SSQTFRNSAFSSWS Trigger: GCTCCAAGACGAGAAGGCAGAGTTACGGAAGGTCTGTGAGGAGCAGGAGCAAGCCCTCCAGGAAATGGGACTACACCTTAGCCAGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | GCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGGTGGGTCACTTAGGAGCTGCTaGTTGTCTATGAGGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFLHSEDGGQQVKVPAGGSLRSC*LSMRTF Trigger: GAAAGTCCTCATAGACAACAAGCAGCTCCTAAGTGA...CCCACCAGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | CCCTACAGGTCTCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCTTGCTAGAGCAGGTGTaGCAGAAAATGTGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PYRSLEIPSLALYLRLSSLLEQV*QKMWPQ Trigger: CTGTGGCCACATTTTCTGCAACACCTGCTCTAGCAA...GGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | AATAAAGGATTTTATTGCAGGGCTGACAGTAGGTGTTGGCAGGAGCATGATGGCGGCAGGGCCAGCTCGTaGCTAGAGCAGGTGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NKGFYCRADSRCWQEHDGGRASS*LEQVLQ Trigger: CTGCAACACCTGCTCTAGCAACGAGCTGGCCCTGCC...GCCATCATGCTCCTGCCAACACCTACTGTCAGCCCTGCAATAAAATCCTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | GCCTGGCCCGTTCCGCCTGCTGTAACCTTTCCTCCATTTGCTTCATaGTGGACATCACCTGAGTGGTTTTTCCTTCAAAAGATGCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: AWPVPPAVTFPPFAS*WTSPEWFFLQKMRW Trigger: CCATCGCATCTTTTGAAGGAAAAACCACTCAGGTGATGTCCAGCATGAAGCAAATGGAGGAAAGGTTACAGCAGGCGGAACGGGCCAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGCACTGTACCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGATCATGTGCATTAGGTaGGCACGCTCCTCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: SLALYLRLSSTLRMEVNRIMCIR*ARSSII Trigger: GATGATGGAGGAGCGTGCCAACCTAATGCACATGAT...CCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | CCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGCTCTTCTTGAAGCTTaGAGTTCGTCTTTTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PEAFLHSEDGGQQVKVPAALLEA*SSSFPS Trigger: GCTTGGAAAAGACGAACTCAAAGCTTCAAGAAGAGC...AGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | CCTGAGGCTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGTCTCCAGTTCAACCTaGGTGTCCTGTTTTGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: PEAFLHSEDGGQQVKVPAVSSST*VSCFVI Trigger: GATAACAAAACAGGACACCAAGGTTGAACTGGAGAC...AGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAGCCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | TGCCACTTGGCATTCTCTTCCGAGGCTGACAGCCTGGTGAAGGTTTCATTCTTTGGCAACGAGCGTGTCTaGCTTCTCATGGGTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CHLAFSSEADSLVKVSFFGNERV*LLMGVL Trigger: AAGGACACCCATGAGAAGCAAGACACGCTCGTTGCC...AAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAATGCCAAGTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTCCACTCTGAGGATGGAGGTCAACAGGTCAAGGTCCCTGCTGGTGGGTTGTAAGTTAATAGCTTaGACTTCCTCCAGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSTLRMEVNRSRSLLVGCKLIA*TSSSCW Trigger: CCAGCAGCTGGAGGAAGTCAAAGCTATTAACTTACA...ACCCACCAGCAGGGACCTTGACCTGTTGACCTCCATCCTCAGAGTGGAGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | AATAAAGGATTTTATTGCAGGGCTGACAGTAGGTGTTGGCAGGAGCATGATGGCCTTCAGGCCTTCCACTaGCTGCAGCTCCGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NKGFYCRADSRCWQEHDGLQAFH*LQLRLE Trigger: CTCCAGACGGAGCTGCAGCAAGTGGAAGGCCTGAAG...GCCATCATGCTCCTGCCAACACCTACTGTCAGCCCTGCAATAAAATCCTTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 90 bp | GACATCGGTAATTCTTTCATGCTCTCTGCCGCTGTCAAGATCCTGTaGGTCCTTCAGACAGAGAGAGAAGTCAATCACCCCGACCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DIGNSFMLSAAVKIL*VLQTEREVNHPDLR Trigger: TCTCAGGTCGGGGTGATTGACTTCTCTCTCTGTCTGAAGGACGCACAGGATCTTGACAGCGGCAGAGAGCATGAAAGAATTACCGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 90 bp | CATCCAGGCCCTGCCGGGTCTGCTTATAAGTCTCCAGTTCAACCTTaGTGTCCTGTTTTGTTATCTCCACGCTCTTCTCGCTTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPGPAGSAYKSPVQP*CPVLLSPRSSRFFL Trigger: GAGAAAGAAGCGAGAAGAGCGTGGAGATAACAAAACAGGACACCAAGGTTGAACTGGAGACTTATAAGCAGACCCGGCAGGGCCTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGCAAAGTCATGAAGTTGCACCTGTACCAAAGCCAGGATTTAACTGAGGACCTCTGCCTTCTCGTCTaGGAGCTCCCGCAGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSKVMKLHLYQSQDLTEDLCLLV*ELPQLL Trigger: AAGGAGCTGCGGGAGCTCCAAGACGAGAAGGCAGAG...GTCCTCAGTTAAATCCTGGCTTTGGTACAGGTGCAACTTCATGACTTTGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CAA 90 bp | TGGGTAGGAAAGAGAAAGGATTCTCTAGTGCAACTGCTGCACAACAGGTTAACCCATTTCCTGGAGGGCTaGCTCCTGCTCCTCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WVGKRKDSLVQLLHNRLTHFLEG*LLLLTD Trigger: GTCTGTGAGGAGCAGGAGCAAGCCCTCCAGGAAATG...GGTTAACCTGTTGTGCAGCAGTTGCACTAGAGAATCCTTTCTCTTTCCTACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CAA 90 bp | CCCTACAGGTCTCTGGAGATCCCAAGTTTGGCACTGTACCTGAGGCTTTCCTCCACTGCTTACAATGTGTaGCCTCGTCATCTTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: PYRSLEIPSLALYLRLSSTAYNV*PRHLST Trigger: GGTTGAAAGATGACGAGGCAACACATTGTAAGCAGT...GGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS GCA 90 bp | CTAAGGGCAGACTGGAGTAAGACCTTAATGCTGAGTTTCATCATGTaGATTAGGTTGGCACGCTCCTCCATCATCTGGCCTTTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRADWSKTLMLSFIM*IRLARSSIIWPLEA Trigger: AGCTTCCAAAGGCCAGATGATGGAGGAGCGTGCCAACCTAATGCACATGATGAAACTCAGCATTAAGGTCTTACTCCAGTCTGCCCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | CACAGCAGAAATCAAGGTTTCTGTGGGACGTGGGTAGGAAAGAGAAAGGATTCTCCCTTTAAGCAGAGGTaGGCATCCAGAACGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSRNQGFCGTWVGKRKDSPFKQR*ASRTLS Trigger: ACTCAACGTTCTGGATGCCAACCTCTGCTTAAAGGG...AGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTTCTGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | GCATTCTCTTCCGAGGCTGACAGCCTGGTGAAGGTTTCATTCTTTCCTTTGATTCCTTGGTGTCCTGTTTaGTTATCTCCACGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AFSSEADSLVKVSFFPLIPWCPV*LSPRSS Trigger: AGAAGAGCGTGGAGATAACAAAACAGGACACCAAGG...AATCAAAGGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS-3UTR CAA 90 bp | AGTAGCAAAGTCATGAAGTTGCACCTGTACCAAAGCCAGGATTTAACTGAGGACCTTAGGAGCTGCTTGTaGTCTATGAGGACTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSKVMKLHLYQSQDLTEDLRSCL*SMRTFR Trigger: TCTGAAAGTCCTCATAGACAACAAGCAGCTCCTAAG...GTCCTCAGTTAAATCCTGGCTTTGGTACAGGTGCAACTTCATGACTTTGCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | ACAAGGCACACTGACAGACCCACAAGGTTCAAAGCACAGCAGAAATCAAGGTTTAACAAATTCGGTCTGTaGCAGCTGAAAGCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRHTDRPTRFKAQQKSRFNKFGL*QLKALL Trigger: AAGAAGAGCTTTCAGCTGCAACAGACCGAATTTGTT...AAACCTTGATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGTGTGCCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 90 bp | CTCTTCTCGCTTCTTTCTCGAATTACTTCGTTCTGTTCTCTCAGCTaGTGTTGTTCTTTTTGTAGGGAACAAATTCGGTCTGTTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFSLLSRITSFCSLS*CCSFCREQIRSVAA Trigger: AGCTGCAACAGACCGAATTTGTTCCCTACAAAAAGAACAACAGCAGCTGAGAGAACAGAACGAAGTAATTCGAGAAAGAAGCGAGAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS-3UTR CAA 90 bp | AAATCAAGGTTTCTGTGGGACGTGGGTAGGAAAGAGAAAGGATTCTCTAGTGCACCAATGAAACTCTTCTaGACTTTCAGCCCATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSRFLWDVGRKEKGFSSAPMKLF*TFSPCL Trigger: CAAACATGGGCTGAAAGTCAAGAAGAGTTTCATTGG...TGCACTAGAGAATCCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 90 bp | CAAAGTTTTTCCACCAGCTCCAAAGGACCAAAGAAAGACTTATTTTaGCCAATGAAACTCTTCTTGACTTTCAGCCCATGTTTGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QSFSTSSKGPKKDLF*PMKLFLTFSPCLRQ Trigger: TTGCCTCAAACATGGGCTGAAAGTCAAGAAGAGTTTCATTGGCCAAAATAAGTCTTTCTTTGGTCCTTTGGAGCTGGTGGAAAAACTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | GCAGCGCGCTGCCGCAGCTCGCCGACAGGTTCCCGGTaGCTCTGCGCGCCAGCGTCAGGATGGGCGCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: AARCRSSPTGSR*LCAPASGWAPT Trigger: GGTCGGCGCCCATCCTGACGCTGGCGCGCAGAGCCACCGGGAACCTGTCGGCGAGCTGCGGCAGCGCGCTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | CGCTGCCGCAGCTCGCCGACAGGTTCCCGGTGGCTCTaGGCGCCAGCGTCAGGATGGGCGCCGACCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RCRSSPTGSRWL*APASGWAPTSC Trigger: ACAGCTGGTCGGCGCCCATCCTGACGCTGGCGCGCAGAGCCACCGGGAACCTGTCGGCGAGCTGCGGCAGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | ACAGGTTCCCGGTGGCTCTGCGCGCCAGCGTCAGGATaGGCGCCGACCAGCTGTCGGCCACTCGAGGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TGSRWLCAPASG*APTSCRPLEAA Trigger: CGCGGCCTCGAGTGGCCGACAGCTGGTCGGCGCCCATCCTGACGCTGGCGCGCAGAGCCACCGGGAACCTGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | CGCGACGCACTCCGCAGCTCGCCGGGACTCGGCAGCTaGCTCCGGTCCACGATCTCGAACGCTTCCCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RDALRSSPGLGS*LRSTISNASPD Trigger: GTCCGGGGAAGCGTTCGAGATCGTGGACCGGAGCCAGCTGCCGAGTCCCGGCGAGCTGCGGAGTGCGTCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | ACGATCTCGAACGCTTCCCCGGACTCTAGGCCTGCTTaGGGCTCAGGCTCCGGCCCCGGCTCGGACTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TISNASPDSRPA*GSGSGPGSDSG Trigger: GCCGGAGTCCGAGCCGGGGCCGGAGCCTGAGCCCCAAGCAGGCCTAGAGTCCGGGGAAGCGTTCGAGATCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | AGCTGCAGGGCACTGCCCCTCCCGCTGAGCTCCTGCTaGAACTTGTGGCTTCGCTCTTCTGCCGCCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCRALPLPLSSC*NLWLRSSAACL Trigger: CAGGCAGGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGAGCTCAGCGGGAGGGGCAGTGCCCTGCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | TGGAGCTGCAGGGCACTGCCCCTCCCGCTGAGCTCCTaGTGCAACTTGTGGCTTCGCTCTTCTGCCGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WSCRALPLPLSS*CNLWLRSSAAC Trigger: GCAGGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGAGCTCAGCGGGAGGGGCAGTGCCCTGCAGCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | ATCATGTGCATTAGGTTGGCACGCTCCTCCATCATCTaGCCTTTGGAAGCTGCGCGCTCCCCGCCGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: IMCIRLARSSII*PLEAARSPPPP Trigger: CGGCGGCGGCGGGGAGCGCGCAGCTTCCAAAGGCCAGATGATGGAGGAGCGTGCCAACCTAATGCACATGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | TCCTGCTGCAACTTGTGGCTTCGCTCTTCTGCCGCCTaGCTGGCCCGTTCCGCCTGCTGTAACCTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCCNLWLRSSAA*LARSACCNLSS Trigger: GGAGGAAAGGTTACAGCAGGCGGAACGGGCCAGGCAGGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | AGTTCTTTCTCTAGACCTGAGCATTGGTCCCGCAGCTaGGACAGCTGGAGCTGCAGGGCACTGCCCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSFSRPEHWSRS*DSWSCRALPLP Trigger: CGGGAGGGGCAGTGCCCTGCAGCTCCAGCTGTCCCAGCTGCGGGACCAATGCTCAGGTCTAGAGAAAGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | CTTCGCTCTTCTGCCGCCTGCCTGGCCCGTTCCGCCTaGTGTAACCTTTCCTCCATTTGCTTCATGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LRSSAACLARSA*CNLSSICFMLD Trigger: GTCCAGCATGAAGCAAATGGAGGAAAGGTTACAGCAGGCGGAACGGGCCAGGCAGGCGGCAGAAGAGCGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | TGGAGCTCCCGCAGCTCCTTCTTCAGGCCTTCCACTTaGTGCAGCTCCGTCTGGAGCAGACAAGAGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WSSRSSFFRPST*CSSVWSRQEVS Trigger: AGACACCTCTTGTCTGCTCCAGACGGAGCTGCAGCAAGTGGAAGGCCTGAAGAAGGAGCTGCGGGAGCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | AGCTCCCGCAGCTCCTTCTTCAGGCCTTCCACTTGCTaGAGCTCCGTCTGGAGCAGACAAGAGGTGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSSFFRPSTC*SSVWSRQEVSF Trigger: GAAAGACACCTCTTGTCTGCTCCAGACGGAGCTGCAGCAAGTGGAAGGCCTGAAGAAGGAGCTGCGGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | CTAAGGTGTAGTCCCATTTCCTGGAGGGCTTGCTCCTaGTCCTCACAGACCTTCCGTAACTCTGCCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRCSPISWRACS*SSQTFRNSAFS Trigger: CGAGAAGGCAGAGTTACGGAAGGTCTGTGAGGAGCAGGAGCAAGCCCTCCAGGAAATGGGACTACACCTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | GCCAGCTCGTTGCTAGAGCAGGTGTTGCAGAAAATGTaGCCACAGTTTCGGCAGTGGTGCTTCCTCCGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASSLLEQVLQKM*PQFRQWCFLRE Trigger: TTCTCGGAGGAAGCACCACTGCCGAAACTGTGGCCACATTTTCTGCAACACCTGCTCTAGCAACGAGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | TTTTCTGACTTCAGTTCTTTCTCTAGACCTGAGCATTaGTCCCGCAGCTGGGACAGCTGGAGCTGCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FSDFSSFSRPEH*SRSWDSWSCRA Trigger: TGCCCTGCAGCTCCAGCTGTCCCAGCTGCGGGACCAATGCTCAGGTCTAGAGAAAGAACTGAAGTCAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | TTCAGTTTGGACTGGCTAAGGTGTAGTCCCATTTCCTaGAGGGCTTGCTCCTGCTCCTCACAGACCTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: FSLDWLRCSPIS*RACSCSSQTFR Trigger: ACGGAAGGTCTGTGAGGAGCAGGAGCAAGCCCTCCAGGAAATGGGACTACACCTTAGCCAGTCCAAACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS TCA 72 bp | CTTCTCCCTTTAAGCAGAGGTTGGCATCCAGAACGTTaGGTCCCACCAGCAGACCCACGATCACCATTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLPLSRGWHPER*VPPADPRSPFL Trigger: AAGGAATGGTGATCGTGGGTCTGCTGGTGGGACTCAACGTTCTGGATGCCAACCTCTGCTTAAAGGGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CAA 72 bp | TCTTCTCCCTTTAAGCAGAGGTTGGCATCCAGAACGTaGAGTCCCACCAGCAGACCCACGATCACCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSPFKQRLASRT*SPTSRPTITIP Trigger: AGGAATGGTGATCGTGGGTCTGCTGGTGGGACTCAACGTTCTGGATGCCAACCTCTGCTTAAAGGGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CAA 90 bp | GACTGGAGTAAGACCTTAATGCTGAGTTTCATCATGTGCATTAGGTaGGCACGCTCCTCCATCATCTGGCCTTTGGAAGCTGCGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DWSKTLMLSFIMCIR*ARSSIIWPLEAARS Trigger: GGAGCGCGCAGCTTCCAAAGGCCAGATGATGGAGGAGCGTGCCAACCTAATGCACATGATGAAACTCAGCATTAAGGTCTTACTCCAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | TCTGCATCCAGACTGCGTCCCAGGCTAAGGGCAGACTaGAGTAAGACCTTAATGCTGAGTTTCATCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SASRLRPRLRAD*SKTLMLSFIMC Trigger: GCACATGATGAAACTCAGCATTAAGGTCTTACTCCAGTCTGCCCTTAGCCTGGGACGCAGTCTGGATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | CCTGCCGGGTCTGCTTATAAGTCTCCAGTTCAACCTTaGTGTCCTGTTTTGTTATCTCCACGCTCTTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PAGSAYKSPVQP*CPVLLSPRSSR Trigger: GCGAGAAGAGCGTGGAGATAACAAAACAGGACACCAAGGTTGAACTGGAGACTTATAAGCAGACCCGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | AACATCTGTAAGTTAATAGCTTTGACTTCCTCCAGCTaGTGGCGGAGGGCAACGAGCGTGTCTTGCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NICKLIALTSSS*WRRATSVSCFS Trigger: TGAGAAGCAAGACACGCTCGTTGCCCTCCGCCAGCAGCTGGAGGAAGTCAAAGCTATTAACTTACAGATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS TCA 72 bp | TCCTTCAGACAGAGAGAGAAGTCAATCACCCCGACCTaGGAATCCAAGTCTTCTCCCTTTAAGCAGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFRQREKSITPT*ESKSSPFKQRL Trigger: CAACCTCTGCTTAAAGGGAGAAGACTTGGATTCTCAGGTCGGGGTGATTGACTTCTCTCTCTGTCTGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | GACTGGAGTAAGACCTTAATGCTGAGTTTCATCATGTaGATTAGGTTGGCACGCTCCTCCATCATCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DWSKTLMLSFIM*IRLARSSIIWP Trigger: AGGCCAGATGATGGAGGAGCGTGCCAACCTAATGCACATGATGAAACTCAGCATTAAGGTCTTACTCCAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS TCA 72 bp | TTTGAGTTCGTCTTTTCCAAGCCATCTATCTTCGTCTaGAGATCCCCAACTGTGCAGCTTAGGTGCCGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: FEFVFSKPSIFV*RSPTVQLRCRL Trigger: TAACCGGCACCTAAGCTGCACAGTTGGGGATCTTCAGACGAAGATAGATGGCTTGGAAAAGACGAACTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | GTTCCGCCTGCTGTAACCTTTCCTCCATTTGCTTCATaGTGGACATCACCTGAGTGGTTTTTCCTTCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VPPAVTFPPFAS*WTSPEWFFLQK Trigger: CTTTTGAAGGAAAAACCACTCAGGTGATGTCCAGCATGAAGCAAATGGAGGAAAGGTTACAGCAGGCGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CAA 72 bp | AAGACCTTAATGCTGAGTTTCATCATGTGCATTAGGTaGGCACGCTCCTCCATCATCTGGCCTTTGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KTLMLSFIMCIR*ARSSIIWPLEA Trigger: AGCTTCCAAAGGCCAGATGATGGAGGAGCGTGCCAACCTAATGCACATGATGAAACTCAGCATTAAGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | ACATCACCTGAGTGGTTTTTCCTTCAAAAGATGCGATaGCTTCATTCTTCTGCTGTAAACTGCTCTCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TSPEWFFLQKMR*LHSSAVNCSLH Trigger: GTGCAGAGAGCAGTTTACAGCAGAAGAATGAAGCCATCGCATCTTTTGAAGGAAAAACCACTCAGGTGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CAA 72 bp | TTCGGTCTGTTGCAGCTGAAAGCTCTTCTTGAAGCTTaGAGTTCGTCTTTTCCAAGCCATCTATCTTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FGLLQLKALLEA*SSSFPSHLSSS Trigger: AGACGAAGATAGATGGCTTGGAAAAGACGAACTCAAAGCTTCAAGAAGAGCTTTCAGCTGCAACAGACCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CAA 72 bp | GCTTATAAGTCTCCAGTTCAACCTTGGTGTCCTGTTTaGTTATCTCCACGCTCTTCTCGCTTCTTTCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AYKSPVQPWCPV*LSPRSSRFFLE Trigger: TTCGAGAAAGAAGCGAGAAGAGCGTGGAGATAACAAAACAGGACACCAAGGTTGAACTGGAGACTTATAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | AGACAAGAGGTGTCTTTCTCACGCTGTAGTTCTCTCTaGAGAGCTTGTCTTTGTTCTTTTTCTGACTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RQEVSFSRCSSL*RACLCSFSDFS Trigger: ACTGAAGTCAGAAAAAGAACAAAGACAAGCTCTCCAGAGAGAACTACAGCGTGAGAAAGACACCTCTTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CAA 72 bp | TTCCACCAGCTCCAAAGGACCAAAGAAAGACTTATTTaGGCCAATGAAACTCTTCTTGACTTTCAGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: FHQLQRTKERLI*ANETLLDFQPM Trigger: CATGGGCTGAAAGTCAAGAAGAGTTTCATTGGCCAAAATAAGTCTTTCTTTGGTCCTTTGGAGCTGGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
||
| CDS CAA 72 bp | GCTGTTGTTCTTTTTGTAGGGAACAAATTCGGTCTGTaGCAGCTGAAAGCTCTTCTTGAAGCTTTGAGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AVVLFVGNKFGL*QLKALLEALSS Trigger: CGAACTCAAAGCTTCAAGAAGAGCTTTCAGCTGCAACAGACCGAATTTGTTCCCTACAAAAAGAACAACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | CAAAAGATGCGATGGCTTCATTCTTCTGCTGTAAACTaGTCTCTGCACTCTGAACTTTGTGAAACATCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QKMRWLHSSAVN*SLHSELCETSV Trigger: TACAGATGTTTCACAAAGTTCAGAGTGCAGAGAGCAGTTTACAGCAGAAGAATGAAGCCATCGCATCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CCA 72 bp | TTACAATGTGTTGCCTCGTCATCTTTCAACCATGTGTaGCCCTTCAGTGCCTTATTTACTTCCTTTATGTCT | + |
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Preference number: 6 (lower is better) Translates to: LQCVASSSFNHV*PFSALFTSFMS Trigger: AGACATAAAGGAAGTAAATAAGGCACTGAAGGGCCACACATGGTTGAAAGATGACGAGGCAACACATTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS CAA 90 bp | ACAAAGTTTTTCCACCAGCTCCAAAGGACCAAAGAAAGACTTATTTaGGCCAATGAAACTCTTCTTGACTTTCAGCCCATGTTTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TKFFHQLQRTKERLI*ANETLLDFQPMFEA Trigger: TGCCTCAAACATGGGCTGAAAGTCAAGAAGAGTTTCATTGGCCAAAATAAGTCTTTCTTTGGTCCTTTGGAGCTGGTGGAAAAACTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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| CDS GCA 72 bp | CTTCTTTCTCGAATTACTTCGTTCTGTTCTCTCAGCTaGTGTTGTTCTTTTTGTAGGGAACAAATTCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSRITSFCSLS*CCSFCREQIRS Trigger: AGACCGAATTTGTTCCCTACAAAAAGAACAACAGCAGCTGAGAGAACAGAACGAAGTAATTCGAGAAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020643.4 |
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