Pregenerated sensors for RTTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023066Ensembl transcript IDs: ENSMUST00000023828.9, ENSMUST00000236313.2, ENSMUST00000236676.2, ENSMUST00000237640.2
Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTTGCGTCACAAACTGGTCAAGGGCAGTTTCAGGAAGAAGTGTTaGCGGCAGCAGGGGCTGAATCTCAGAACTGACCACCGAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: TLRHKLVKGSFRKKC*RQQGLNLRTDHRGS Trigger: GCTGCCTCGGTGGTCAGTTCTGAGATTCAGCCCCTGCTGCCGTCAACACTTCTTCCTGAAACTGCCCTTGACCAGTTTGTGACGCAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR CCA 90 bp | TGGACACGCCTCTTTTCTTCCTCAGCCAAGAGAACAGACAGGAACTaGAGGCTGGCAATAGTCAGGGCAGGGCACTTGAATGAGAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: WTRLFSSSAKRTDRN*RLAIVRAGHLNERP Trigger: GGGCCTCTCATTCAAGTGCCCTGCCCTGACTATTGCCAGCCTCCAGTTCCTGTCTGTTCTCTTGGCTGAGGAAGAAAAGAGGCGTGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 90 bp | TTTCAGGAAGAAGTGTTGACGGCAGCAGGGGCTGAATCTCAGAACTaGCCACCGAGGCAGCCACCATTGTTTCTGAGGTGGAAAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FQEEVLTAAGAESQN*PPRQPPLFLRWKES Trigger: GCTCTCTTTCCACCTCAGAAACAATGGTGGCTGCCTCGGTGGTCAGTTCTGAGATTCAGCCCCTGCTGCCGTCAACACTTCTTCCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 90 bp | CTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTaGTACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAA | + |
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Preference number: 1 (lower is better) Translates to: LLSVWRLLSHREGRH*YCRVSIIQGAAAIQ Trigger: TTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| 3UTR GCA 90 bp | AGGCTACAGACTGCTGACAGCAGAGACGGAGTAACAAACACATACTaGCTGTTCAGGGAAGTAGACAGCAATGAGTCACGAGGTCGCACT | + |
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Preference number: 1 (lower is better) Translates to: RLQTADSRDGVTNTY*LFREVDSNESRGRT Trigger: AGTGCGACCTCGTGACTCATTGCTGTCTACTTCCCTGAACAGGCAGTATGTGTTTGTTACTCCGTCTCTGCTGTCAGCAGTCTGTAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 90 bp | GTAGACAGCAATGAGTCACGAGGTCGCACTGGTCTCATTTCACGTTaGCCTTGCGTCACAAACTGGTCAAGGGCAGTTTCAGGAAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: VDSNESRGRTGLISR*PCVTNWSRAVSGRS Trigger: ACTTCTTCCTGAAACTGCCCTTGACCAGTTTGTGACGCAAGGTCAACGTGAAATGAGACCAGTGCGACCTCGTGACTCATTGCTGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 90 bp | CGGAGTAACAAACACATACTGCCTGTTCAGGGAAGTAGACAGCAATaGGTCACGAGGTCGCACTGGTCTCATTTCACGTTGACCTTGCGT | + |
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Preference number: 1 (lower is better) Translates to: RSNKHILPVQGSRQQ*VTRSHWSHFTLTLR Trigger: ACGCAAGGTCAACGTGAAATGAGACCAGTGCGACCTCGTGACTCATTGCTGTCTACTTCCCTGAACAGGCAGTATGTGTTTGTTACTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 90 bp | TACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTaGTCCAGATCTCCTGTGGACGGCGGTCAGGTTTGGAGTAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: YCRVSIIQGAAAIQS*SRSPVDGGQVWSRV Trigger: TACTCTACTCCAAACCTGACCGCCGTCCACAGGAGATCTGGATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| 3UTR CCA 90 bp | AGAATTCTGTCTTTGCAGCATCTTGGGTCAGCGAGTCTTCACTTCTaGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: RILSLQHLGSASLHF*KTARNKQPEKSPVL Trigger: TAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGCTGCAAAGACAGAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| 3UTR CCA 90 bp | TTCAGGAGCAACTTCAACCACAGAATGGCCACAGTGCTGAGATGTTaGTTTCCTCCTTTAGGCAATGTCAGGGACAAGAAGTGCTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: FRSNFNHRMATVLRC*FPPLGNVRDKKCCR Trigger: TCTACAGCACTTCTTGTCCCTGACATTGCCTAAAGGAGGAAACCAACATCTCAGCACTGTGGCCATTCTGTGGTTGAAGTTGCTCCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR GCA 90 bp | TTCATCTGCTCCATACAGTTTTCTATGAGATCAGATCTCAAAGCATaGCTCTGCGCTCTTCTGCTAACAGCCAGAAGTGACAACAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: FICSIQFSMRSDLKA*LCALLLTARSDNRA Trigger: TGCCCTGTTGTCACTTCTGGCTGTTAGCAGAAGAGCGCAGAGGCATGCTTTGAGATCTGATCTCATAGAAAACTGTATGGAGCAGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 90 bp | CTTCAGCCACCACAGTACAATCTTCATGAAATATCAAGGAAACTCTaGGTAATAGGGTCAAGAGAGAGGCCTGCTGTGACAAGGAAACAC | + |
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Preference number: 1 (lower is better) Translates to: LQPPQYNLHEISRKL*VIGSRERPAVTRKH Trigger: GTGTTTCCTTGTCACAGCAGGCCTCTCTCTTGACCCTATTACTCAGAGTTTCCTTGATATTTCATGAAGATTGTACTGTGGTGGCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| 3UTR TCA 90 bp | ATTTGCAGTATAGACACAAAGCAACTGCAAGGCAATTTGCATCAATaGATCTTCCATCAAAAGCCAAGGCCAGAGAGAGTGCAATACAGG | + |
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Preference number: 1 (lower is better) Translates to: ICSIDTKQLQGNLHQ*IFHQKPRPERVQYR Trigger: CCTGTATTGCACTCTCTCTGGCCTTGGCTTTTGATGGAAGATTCATTGATGCAAATTGCCTTGCAGTTGCTTTGTGTCTATACTGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236676.2 ENSMUST00000237640.2 |
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| 3UTR GCA 90 bp | GCTTTCCCAGGTCTCAGCAAATCTAAGTTCAGTTGTGCATTGATGTaGTTCATCTGCTCCATACAGTTTTCTATGAGATCAGATCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: AFPGLSKSKFSCALM*FICSIQFSMRSDLK Trigger: TTTGAGATCTGATCTCATAGAAAACTGTATGGAGCAGATGAAGCACATCAATGCACAACTGAACTTAGATTTGCTGAGACCTGGGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 90 bp | ATTTTAGCTTCAGAGGTCATTTGTTTCAATAGATTATCACTCCCATaGTACCATGCCAGGTTCCAAGCTATTCTCAGCATATCTGACACC | + |
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Preference number: 1 (lower is better) Translates to: ILASEVICFNRLSLP*YHARFQAILSISDT Trigger: GGTGTCAGATATGCTGAGAATAGCTTGGAACCTGGCATGGTATCATGGGAGTGATAATCTATTGAAACAAATGACCTCTGAAGCTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| 3UTR TCA 90 bp | GCAAGGATATCTTCTGTGGACAGCTGCAGTGTATCTAAAAATTCCTaGATTTTAGCTTCAGAGGTCATTTGTTTCAATAGATTATCACTC | + |
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Preference number: 1 (lower is better) Translates to: ARISSVDSCSVSKNS*ILASEVICFNRLSL Trigger: GAGTGATAATCTATTGAAACAAATGACCTCTGAAGCTAAAATTCAGGAATTTTTAGATACACTGCAGCTGTCCACAGAAGATATCCTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| 3UTR CAA 90 bp | AGAACAGACAGGAACTGGAGGCTGGCAATAGTCAGGGCAGGGCACTaGAATGAGAGGCCCACACATCTACACAGTGTATCAGTCACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: RTDRNWRLAIVRAGH*NERPTHLHSVSVTA Trigger: GGCAGTGACTGATACACTGTGTAGATGTGTGGGCCTCTCATTCAAGTGCCCTGCCCTGACTATTGCCAGCCTCCAGTTCCTGTCTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGGCTGCTATACAAAGCTaGTCCAGATCTCCTGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SPVLLLSVWRLLSHREGRAAIQS*SRSPVD Trigger: GTCCACAGGAGATCTGGATCAGCTTTGTATAGCAGC...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCAGGGAAGGCAGGCACTaGTACTGCAGAGTTAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGREGRH*YCRVSI Trigger: AATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCT...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| 3UTR-3UTR GCA 90 bp | AACTGGAGGCTGGCAATAGTCAGGGCAGGGCACTTGAATGAGAGGCCCACACATTATTCAGGGAGCAGCTaGTATACAAAGCTGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: NWRLAIVRAGHLNERPTHYSGSS*YTKLIQ Trigger: CTGGATCAGCTTTGTATAGCAGCTGCTCCCTGAATA...ATGTGTGGGCCTCTCATTCAAGTGCCCTGCCCTGACTATTGCCAGCCTCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTTTCTTCCTCAGCCAAGAGAACAGACAGGAACTGGAGGCTGGCAATAGTGCTGCTATACAAAGCTaGTCCAGATCTCCTGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PLFFLSQENRQELEAGNSAAIQS*SRSPVD Trigger: GTCCACAGGAGATCTGGATCAGCTTTGTATAGCAGC...ACTATTGCCAGCCTCCAGTTCCTGTCTGTTCTCTTGGCTGAGGAAGAAAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR CAA 90 bp | GAGGGAAGCATCCACCGTGCTACAGAGGAGTTCTATGAGATGAGCTaGTTGAAAAGCATTTGCAGCATCTCTTGGAGTAACTGCCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: EGSIHRATEEFYEMS*LKSICSISWSNCQE Trigger: CTCTTGGCAGTTACTCCAAGAGATGCTGCAAATGCTTTTCAACAAGCTCATCTCATAGAACTCCTCTGTAGCACGGTGGATGCTTCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR CAA 90 bp | GGAAGCATCCACCGTGCTACAGAGGAGTTCTATGAGATGAGCTTGTaGAAAAGCATTTGCAGCATCTCTTGGAGTAACTGCCAAGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GSIHRATEEFYEMSL*KSICSISWSNCQEV Trigger: AACCTCTTGGCAGTTACTCCAAGAGATGCTGCAAATGCTTTTCAACAAGCTCATCTCATAGAACTCCTCTGTAGCACGGTGGATGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGGAGCAACTTCAACCACAGAATGGCCACAGTGCTGAGATGTTGGTTTCCGTCAGGGACAAGAAGTaGTGTAGAAAGTTGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: IQEQLQPQNGHSAEMLVSVRDKK*CRKLLF Trigger: AAAGAGCAACTTTCTACAGCACTTCTTGTCCCTGAC...GGAAACCAACATCTCAGCACTGTGGCCATTCTGTGGTTGAAGTTGCTCCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGGAGCAACTTCAACCACAGAATGGCCACAGTGCTGAGATGTTGGTTTCCACGTGCTTCAAGAGCTaGCACTTTACATTCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: IQEQLQPQNGHSAEMLVSTCFKS*HFTFFI Trigger: AATGAAGAATGTAAAGTGGCAGCTCTTGAAGCACGT...GGAAACCAACATCTCAGCACTGTGGCCATTCTGTGGTTGAAGTTGCTCCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR CAA 90 bp | GAGAACTCGGATGACATTAGTGATAAGAGGTTTCAAGAGCTCATCTaGTGTCACAAGTTTAGGCTCTACCAACAGACAGGACTTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: ENSDDISDKRFQELI*CHKFRLYQQTGLQE Trigger: CTCTTGAAGTCCTGTCTGTTGGTAGAGCCTAAACTTGTGACACAAGATGAGCTCTTGAAACCTCTTATCACTAATGTCATCCGAGTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGACACCGGCTTCAGGGTCAAACATTCAGTAGGTAATGGCAAAACTATTGAGATACCTTCTAAAGACTaGAACCGGCAAACTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SDTGFRVKHSVGNGKTIEIPSKD*NRQTED Trigger: GTCTTCAGTTTGCCGGTTTCAGTCTTTAGAAGGTAT...CTCAATAGTTTTGCCATTACCTACTGAATGTTTGACCCTGAAGCCGGTGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGATTTTAGGCTTATTAGCAGGACTGAAGCAAATGTTATGAAAGATCAGCAGCCAACTGCTGAATGGTaGTGTTCTCTGCAGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: QDFRLISRTEANVMKDQQPTAEW*CSLQAS Trigger: AGATGCCTGCAGAGAACACCACCATTCAGCAGTTGG...CTGCTGATCTTTCATAACATTTGCTTCAGTCCTGCTAATAAGCCTAAAATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR TCA 90 bp | CATCGAACAATAGAAGACAAAACAATGCCCCGACTTCAGCCACCACAGTACAATATATCAAGGAAACTCTaGGTAATAGGGTCAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HRTIEDKTMPRLQPPQYNISRKL*VIGSRE Trigger: CTCTCTTGACCCTATTACTCAGAGTTTCCTTGATAT...ATTGTACTGTGGTGGCTGAAGTCGGGGCATTGTTTTGTCTTCTATTGTTCGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| 3UTR CAA 90 bp | AGTACTGCTTTCCCAGGTCTCAGCAAATCTAAGTTCAGTTGTGCATaGATGTGCTTCATCTGCTCCATACAGTTTTCTATGAGATCAGAT | + |
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Preference number: 2 (lower is better) Translates to: STAFPGLSKSKFSCA*MCFICSIQFSMRSD Trigger: ATCTGATCTCATAGAAAACTGTATGGAGCAGATGAAGCACATCAATGCACAACTGAACTTAGATTTGCTGAGACCTGGGAAAGCAGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTAGGAGCTGCATGGTGATGCTTAATTCTTTAATGAAGCCATCCTCCTTTAGTTCAGTTGTGCATTaGTGTGCTTCATCTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: FLRSCMVMLNSLMKPSSFSSVVH*CASSAP Trigger: TGGAGCAGATGAAGCACATCAATGCACAACTGAACT...AAAGGAGGATGGCTTCATTAAAGAATTAAGCATCACCATGCAGCTCCTAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236676.2 ENSMUST00000237640.2 |
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| 3UTR CAA 90 bp | AGTATAAAAATGTTTATATTGTCAGAATTCTGTCTTTGCAGCATCTaGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: SIKMFILSEFCLCSI*GQRVFTSGRLPGTN Trigger: GTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGCTGCAAAGACAGAATTCTGACAATATAAACATTTTTATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGATTTTAGGCTTATTAGCAGGACTGAAGCAAATGTTATGAAAGATCAGCAGATAAAAACCAACTGCTaGATGGTGGTGTTCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: QDFRLISRTEANVMKDQQIKTNC*MVVFSA Trigger: TGCAGAGAACACCACCATTCAGCAGTTGGTTTTTAT...CTGCTGATCTTTCATAACATTTGCTTCAGTCCTGCTAATAAGCCTAAAATCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR CAA 90 bp | ACAAAGAAGGCTTATCAGAAAGAGTATCAGACCATGTATCCATTCTaGATACTTCATCGAACAATAGAAGACAAAACAATGCCCCGACTT | + |
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Preference number: 2 (lower is better) Translates to: TKKAYQKEYQTMYPF*ILHRTIEDKTMPRL Trigger: AAGTCGGGGCATTGTTTTGTCTTCTATTGTTCGATGAAGTATCAAGAATGGATACATGGTCTGATACTCTTTCTGATAAGCCTTCTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| 3UTR TCA 72 bp | GAAGTGTTGACGGCAGCAGGGGCTGAATCTCAGAACTaGCCACCGAGGCAGCCACCATTGTTTCTGAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: EVLTAAGAESQN*PPRQPPLFLRW Trigger: CCACCTCAGAAACAATGGTGGCTGCCTCGGTGGTCAGTTCTGAGATTCAGCCCCTGCTGCCGTCAACACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCACTGTTGGGGCCTGGCCCTCATTTGTTTTGTCCTTGTCCTGGACACGCCTGGGGCCCTCCAAAACTaGAATGAGTCGTCTAAACCA | + |
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Preference number: 3 (lower is better) Translates to: GHCWGLALICFVLVLDTPGALQN*NESSKP Trigger: TGGTTTAGACGACTCATTCAAGTTTTGGAGGGCCCC...AGGCGTGTCCAGGACAAGGACAAAACAAATGAGGGCCAGGCCCCAACAGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 72 bp | GTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTaGTACTGCAGAGTTAGCATTATTCAGGGAGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: VWRLLSHREGRH*YCRVSIIQGAA Trigger: AGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| 3UTR TCA 72 bp | CTGGAGGCTGGCAATAGTCAGGGCAGGGCACTTGAATaGGAGGCCCACACATCTACACAGTGTATCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LEAGNSQGRALE*EAHTSTQCISH Trigger: GTGACTGATACACTGTGTAGATGTGTGGGCCTCTCATTCAAGTGCCCTGCCCTGACTATTGCCAGCCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 72 bp | CTCAGAACTGACCACCGAGGCAGCCACCATTGTTTCTaGGGTGGAAAGAGAGCTTGGCTCATGATCCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: LRTDHRGSHHCF*GGKRAWLMILS Trigger: ACTCAGGATCATGAGCCAAGCTCTCTTTCCACCTCAGAAACAATGGTGGCTGCCTCGGTGGTCAGTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 72 bp | CACAAACTGGTCAAGGGCAGTTTCAGGAAGAAGTGTTaGCGGCAGCAGGGGCTGAATCTCAGAACTGACCAC | + |
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Preference number: 3 (lower is better) Translates to: HKLVKGSFRKKC*RQQGLNLRTDH Trigger: GTGGTCAGTTCTGAGATTCAGCCCCTGCTGCCGTCAACACTTCTTCCTGAAACTGCCCTTGACCAGTTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR GCA 72 bp | AGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTaGTGTCTCACAGGGAAGGCAGGCACTGATACTGCA | + |
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Preference number: 3 (lower is better) Translates to: RSHQFYSFQFGG*CLTGKAGTDTA Trigger: TGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| 3UTR CCA 72 bp | GAACAAGGGAGACAGCACCAGCTTTCCTCAGTAGTGTaGCCAGAAGGTCAAATAAATGCGTCCATGTGCGGT | + |
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Preference number: 3 (lower is better) Translates to: EQGRQHQLSSVV*PEGQINASMCG Trigger: ACCGCACATGGACGCATTTATTTGACCTTCTGGCCACACTACTGAGGAAAGCTGGTGCTGTCTCCCTTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR CCA 72 bp | CTCTTTTCTTCCTCAGCCAAGAGAACAGACAGGAACTaGAGGCTGGCAATAGTCAGGGCAGGGCACTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: LFSSSAKRTDRN*RLAIVRAGHLN Trigger: ATTCAAGTGCCCTGCCCTGACTATTGCCAGCCTCCAGTTCCTGTCTGTTCTCTTGGCTGAGGAAGAAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR-3UTR CAA 90 bp | GCATCTCTTGGAGTAACTGCCAAGAGGTTGTCTAAAAGGCTACAGACTGCTGACTTTCAGGAAGAAGTGTaGACGGCAGCAGGGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: ASLGVTAKRLSKRLQTADFQEEV*TAAGAE Trigger: TTCAGCCCCTGCTGCCGTCAACACTTCTTCCTGAAA...GTCAGCAGTCTGTAGCCTTTTAGACAACCTCTTGGCAGTTACTCCAAGAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 72 bp | GTTTCATTAAGTCGCTCTGAAGAGCTAAGGCTTCCCTaGGTTCCATCAAGAAGTAAGGCCACTGTTGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: VSLSRSEELRLP*VPSRSKATVGA Trigger: GGCCCCAACAGTGGCCTTACTTCTTGATGGAACTCAGGGAAGCCTTAGCTCTTCAGAGCGACTTAATGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR GCA 72 bp | ACACATCTACACAGTGTATCAGTCACTGCCTCCCAATaGTTGGCAAGAGCTGAGGTAAGAGGAACAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: THLHSVSVTASQ*LARAEVRGTRE Trigger: CTCCCTTGTTCCTCTTACCTCAGCTCTTGCCAAGCATTGGGAGGCAGTGACTGATACACTGTGTAGATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| 3UTR TCA 72 bp | TCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTaGGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SSLLEDCQEQTA*EVTSSTPFSLA Trigger: CGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
||
| 3UTR TCA 72 bp | AAACACATACTGCCTGTTCAGGGAAGTAGACAGCAATaGGTCACGAGGTCGCACTGGTCTCATTTCACGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KHILPVQGSRQQ*VTRSHWSHFTL Trigger: CAACGTGAAATGAGACCAGTGCGACCTCGTGACTCATTGCTGTCTACTTCCCTGAACAGGCAGTATGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR TCA 72 bp | GAGGGCTGCTCTTGTGCTTGTACTTGCTCATCTCTATaGGTAAGTCTAAGCAGCCATCTAGCCTCAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: EGCSCACTCSSL*VSLSSHLASGS Trigger: TGATCCTGAGGCTAGATGGCTGCTTAGACTTACTCATAGAGATGAGCAAGTACAAGCACAAGAGCAGCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR TCA 72 bp | GCCCAAAGTGAAGCTGCTCCAATCCTCTGGGCAGTTTaGTTCTCACTTTCTAAACAGGCAGCCAGAAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: AQSEAAPILWAV*FSLSKQAARRV Trigger: TACTCTTCTGGCTGCCTGTTTAGAAAGTGAGAATCAAACTGCCCAGAGGATTGGAGCAGCTTCACTTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR GCA 72 bp | ACTGCTGACAGCAGAGACGGAGTAACAAACACATACTaGCTGTTCAGGGAAGTAGACAGCAATGAGTCACGA | + |
|
Preference number: 3 (lower is better) Translates to: TADSRDGVTNTY*LFREVDSNESR Trigger: TCGTGACTCATTGCTGTCTACTTCCCTGAACAGGCAGTATGTGTTTGTTACTCCGTCTCTGCTGTCAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR CCA 72 bp | AAGCCAGTTTCAGGATACACAGTATCAGGGAGCTACTaGGGGTGCCTCAGCTGGAAAATTTGCAGTATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KPVSGYTVSGSY*GCLSWKICSID Trigger: GTCTATACTGCAAATTTTCCAGCTGAGGCACCCCCAGTAGCTCCCTGATACTGTGTATCCTGAAACTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGGAGCAACTTCAACCACAGAATGGCCACAGTGCTGAGATGTTGGTTTCCGTGACAACAGGGCATTaGCAGCAACTCTTTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IQEQLQPQNGHSAEMLVSVTTGH*QQLFSG Trigger: TCCTGAAAAGAGTTGCTGCAAATGCCCTGTTGTCAC...GGAAACCAACATCTCAGCACTGTGGCCATTCTGTGGTTGAAGTTGCTCCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR GCA 72 bp | CCAAGGCCAGAGAGAGTGCAATACAGGCACAAGACGTaGTTCAAGAGCTGCCACTTTACATTCTTCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PRPERVQYRHKT*FKSCHFTFFIL Trigger: CAAAATGAAGAATGTAAAGTGGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236676.2 ENSMUST00000237640.2 |
||
| 3UTR GCA 72 bp | TCCATACAGTTTTCTATGAGATCAGATCTCAAAGCATaGCTCTGCGCTCTTCTGCTAACAGCCAGAAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SIQFSMRSDLKA*LCALLLTARSD Trigger: GTCACTTCTGGCTGTTAGCAGAAGAGCGCAGAGGCATGCTTTGAGATCTGATCTCATAGAAAACTGTATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGACTTCAAGAGCTGGGACAAAGAGGATAGGTATTCCAAGAAAAAGGAAGTGGGGTCTTGAGTTCTaGGATGCACATTTCTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: DRTSRAGTKRIGIPRKRKWGLEF*DAHFYE Trigger: CTCATAGAAATGTGCATCCAAGAACTCAAGACCCCA...CTTCCTTTTTCTTGGAATACCTATCCTCTTTGTCCCAGCTCTTGAAGTCCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR GCA 72 bp | GAGGAGTTCTATGAGATGAGCTTGTTGAAAAGCATTTaGAGCATCTCTTGGAGTAACTGCCAAGAGGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EEFYEMSLLKSI*SISWSNCQEVV Trigger: GACAACCTCTTGGCAGTTACTCCAAGAGATGCTGCAAATGCTTTTCAACAAGCTCATCTCATAGAACTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR TCA 72 bp | CCACAGTACAATCTTCATGAAATATCAAGGAAACTCTaGGTAATAGGGTCAAGAGAGAGGCCTGCTGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PQYNLHEISRKL*VIGSRERPAVT Trigger: TGTCACAGCAGGCCTCTCTCTTGACCCTATTACTCAGAGTTTCCTTGATATTTCATGAAGATTGTACTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
||
| 3UTR CCA 72 bp | AGTTTAGGCTCTACCAACAGACAGGACTTCAAGAGCTaGGACAAAGAGGATAGGTATTCCAAGAAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLGSTNRQDFKS*DKEDRYSKKKE Trigger: TTCCTTTTTCTTGGAATACCTATCCTCTTTGTCCCAGCTCTTGAAGTCCTGTCTGTTGGTAGAGCCTAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR TCA 72 bp | TTCATAGCACTGAAGAATTGTTTCATTAAGTCGCTCTaGAGAGCTAAGGCTTCCCTGAGTTCCATCAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FIALKNCFIKSL*RAKASLSSIKK Trigger: CTTCTTGATGGAACTCAGGGAAGCCTTAGCTCTTCAGAGCGACTTAATGAAACAATTCTTCAGTGCTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR GCA 72 bp | GTAGTGTGGCCAGAAGGTCAAATAAATGCGTCCATGTaGGGTAAAAAGCCAACACTAACTGTACATCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: VVWPEGQINASM*GKKPTLTVHLI Trigger: TATTAGATGTACAGTTAGTGTTGGCTTTTTACCGCACATGGACGCATTTATTTGACCTTCTGGCCACACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR TCA 72 bp | TCAGAGGTCATTTGTTTCAATAGATTATCACTCCCATaGTACCATGCCAGGTTCCAAGCTATTCTCAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SEVICFNRLSLP*YHARFQAILSI Trigger: TATGCTGAGAATAGCTTGGAACCTGGCATGGTATCATGGGAGTGATAATCTATTGAAACAAATGACCTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
||
| 3UTR GCA 72 bp | GGTCTCAGCAAATCTAAGTTCAGTTGTGCATTGATGTaGTTCATCTGCTCCATACAGTTTTCTATGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: GLSKSKFSCALM*FICSIQFSMRS Trigger: TGATCTCATAGAAAACTGTATGGAGCAGATGAAGCACATCAATGCACAACTGAACTTAGATTTGCTGAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR GCA 72 bp | AGTGCTGTAGAAAGTTGCTCTTTTGAATTACTCCCTTaGAGTCATGAGATAAGGCCAAGTTTGAAAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SAVESCSFELLP*SHEIRPSLKET Trigger: TGTTTCTTTCAAACTTGGCCTTATCTCATGACTGCAAGGGAGTAATTCAAAAGAGCAACTTTCTACAGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| 3UTR GCA 72 bp | AGTATAAAAATGTTTATATTGTCAGAATTCTGTCTTTaGAGCATCTTGGGTCAGCGAGTCTTCACTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SIKMFILSEFCL*SILGQRVFTSG Trigger: TCCAGAAGTGAAGACTCGCTGACCCAAGATGCTGCAAAGACAGAATTCTGACAATATAAACATTTTTATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
||
| 3UTR TCA 72 bp | TCTTCTGTGGACAGCTGCAGTGTATCTAAAAATTCCTaGATTTTAGCTTCAGAGGTCATTTGTTTCAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSVDSCSVSKNS*ILASEVICFNR Trigger: TCTATTGAAACAAATGACCTCTGAAGCTAAAATTCAGGAATTTTTAGATACACTGCAGCTGTCCACAGAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGGGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFSLAAAVSQGRQALILQGVAGL*AQPQKA Trigger: GGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCC...CTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCACTGCATCCCAGTCCTaGCCATCTCCTCGGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASWVSESSLLEDCQEQTATASQS*PSPRGR Trigger: GCGACCCCGAGGAGATGGTCAGGACTGGGATGCAGT...GGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGACTTCAGCCGGGCAGTaGAGGGGAGAGCGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSASLHFWKTARNKQPETSAGQ*RGERLL Trigger: GAGAAGGCGCTCTCCCCTGCACTGCCCGGCTGAAGT...CTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTAACCCAGGGAAGGCAGTaGGGTGAGCCATCCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLTQGRQ*GEPSLL Trigger: TAGCAGGGATGGCTCACCTCACTGCCTTCCCTGGGT...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | CCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACGCTAACAGCCAGAAGTaGCAACAGGGCATTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLLLSVWRLLSHREGRHANSQK*QQGICS Trigger: GCTGCAAATGCCCTGTTGTCACTTCTGGCTGTTAGC...GTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGAGAGCGCCTTCTCCTaGCTCAGAGCTCACTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTSSTPFSLAAAVSQGRQESAFS*LRAHFA Trigger: AGCAAAGTGAGCTCTGAGGCAGGAGAAGGCGCTCTC...CTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGCCTTCCTCAGGAGTGTaGGGCATGGCTGAATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSASLHFWKTARNKQPEPSSGV*GMAESS Trigger: GCTTGATTCAGCCATGCCTCACACTCCTGAGGAAGG...CTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTACAGGCCAATCCTTGCTaGGTAGGGGCATGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGCCLTGKAGTDTAELALQANPC*VGACSS Trigger: TGAAGAACATGCCCCTACTCAGCAAGGATTGGCCTG...TAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGCTCAAAGCATGCCTCTaGGCTCTTCTGCTAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTSSTPFSLAAAVSQGRQLKACL*ALLLTA Trigger: GGCTGTTAGCAGAAGAGCGCAGAGGCATGCTTTGAG...CTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCGGGAGCTACTGGGGGTaGCTCTGTGTGCAGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASWVSESSLLEDCQEQTAGSYWG*LCVQFE Trigger: TTCAAACTGCACACAGAGGCACCCCCAGTAGCTCCC...GGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATCCCGCTGGCCCTGGTaGTACTTCCATCTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLSRWPW*YFHLLE Trigger: TTCCAGCAGATGGAAGTACCACCAGGGCCAGCGGGA...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGGGAAGACTAAGCTGTTaGAACTGCAGCTCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFSLAAAVSQGRQALILQGRLSC*NCSSSV Trigger: CACACTGGAGCTGCAGTTCCAACAGCTTAGTCTTCC...CTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGAGCCACCATTGTTTCTaGGGTGGAAAGAGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVLLLSVWRLLSHREGRSHHCF*GGKRAW Trigger: CCAAGCTCTCTTTCCACCTCAGAAACAATGGTGGCT...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCAAGCCTGGTTTCCCGCTaGCCCTGGTGGTACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SASLHFWKTARNKQPEKSSLVSR*PWWYFH Trigger: ATGGAAGTACCACCAGGGCCAGCGGGAAACCAGGCT...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCATGTCTGTCTGTTGTaGTCAGGGGTAGCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPVLLLSVWRLLSHREGRHVCLL*SGVAKE Trigger: TTCCTTGGCTACCCCTGACCACAACAGACAGACATG...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGACATCCACTCCGAGCCTaGTGCCTGGACTATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRHPLRA*CLDYHL Trigger: GAGATGATAGTCCAGGCACCAGGCTCGGAGTGGATG...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCCAGAGAGAGTGCAATACAGGCACAAGACGTGCTTCAAGAGCTGCCACTTGCCACTGTTGGGGCCTaGCCCTCATTTGTTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KARESAIQAQDVLQELPLATVGA*PSFVLS Trigger: GGACAAAACAAATGAGGGCCAGGCCCCAACAGTGGC...AAGTGGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAAACCAACTGCTGAATaGTGGTGTTCTCTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFSLAAAVSQGRQALILQKPTAE*WCSLQA Trigger: TGCCTGCAGAGAACACCACCATTCAGCAGTTGGTTT...CTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| 3UTR CAA 72 bp | AGTAAGGCCACTGTTGGGGCCTGGCCCTCATTTGTTTaGTCCTTGTCCTGGACACGCCTCTTTTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKATVGAWPSFV*SLSWTRLFSSS Trigger: TGAGGAAGAAAAGAGGCGTGTCCAGGACAAGGACAAAACAAATGAGGGCCAGGCCCCAACAGTGGCCTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACCAGTGCAGGAACTTCTaGAGGAAGAATGAAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVLLLSVWRLLSHREGRHQCRNF*RKNEKS Trigger: GGACTTTTCATTCTTCCTTCAGAAGTTCCTGCACTG...GTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | CCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACAGTGTGAGGCATGGCTaGATCAAGCATTCTATAACC | + |
|
Preference number: 4 (lower is better) Translates to: PVLLLSVWRLLSHREGRHSVRHG*IKHSIT Trigger: GGTTATAGAATGCTTGATTCAGCCATGCCTCACACT...GTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | AAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTCAGCAGAGGAGCTGCTaGCTCCAGGGTGGAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTARNKQPEKSPVLLLSVQQRSC*LQGGDA Trigger: TGCATCTCCACCCTGGAGGCAGCAGCTCCTCTGCTG...AACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCATCTCAGCAGAGGAGCTaGTGCCTCCAGGGTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTARNKQPEKSPVLLLSSQQRS*CLQGGD Trigger: ATCTCCACCCTGGAGGCAGCAGCTCCTCTGCTGAGA...TGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACCCTCAGAGCTCACTTTaGTTAGAAGGAGAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLLLSVWRLLSHREGRHPQSSL*LEGECS Trigger: ACTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGG...GTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGAGGCATGTGAGGGCTaGTCTTGTGCTTGTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AASWVSESSLLEDCQEQTEACEG*SCACTC Trigger: GCAAGTACAAGCACAAGAGCAGCCCTCACATGCCTC...TGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATTCTCCTCGGGGTCGCTaGCCTGTGCGCCCAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADSPRGR*PVRPTT Trigger: TGTGGTTGGGCGCACAGGCCAGCGACCCCGAGGAGA...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACTGCTGCCTCCAGGGTaGAGATGCAGAACTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SASLHFWKTARNKQPEKSLLPPG*RCRTEE Trigger: TTCCTCAGTTCTGCATCTCCACCCTGGAGGCAGCAG...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCCCAGAATCCTCATCATaGACACAGGGGCCCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFPESSS*TQGPCQ Trigger: TTGGCAGGGCCCCTGTGTCCATGATGAGGATTCTGG...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGGGTGGAAAGAGAGCTTaGCTCATGATCCTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPVLLLSVWRLLSHREGRGGKRA*LMILSR Trigger: TCTACTCAGGATCATGAGCCAAGCTCTCTTTCCACC...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTAGGACAGATGGGAAATTaGACCATTCGAGCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGCCLTGKAGTDTAELALGQMGN*TIRANG Trigger: TCCATTTGCTCGAATGGTTCAATTTCCCATCTGTCC...TAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGCTTCTGAAGGAAGAATaGAAAGTCCATCGAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PFSLAAAVSQGRQALILQLLKEE*KVHREC Trigger: GCATTCTCGATGGACTTTTCATTCTTCCTTCAGAAG...CTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTAGATTATCACTCCCATaGTACCATGCCAGGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLAAAVSQGRQALILQSRLSLP*YHARFQ Trigger: TTGGAACCTGGCATGGTATCATGGGAGTGATAATCT...ACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGTTCTTCTCCTGCATGTaGATCTGTCAGAACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSASLHFWKTARNKQPEFFSCM*ICQNQQ Trigger: CTGCTGGTTCTGACAGATTCACATGCAGGAGAAGAA...CTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCGCATGTTCTTCACTGTaGCTACCCAAAGGCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASWVSESSLLEDCQEQTAACSSL*LPKGKN Trigger: GTTCTTGCCTTTGGGTAGTCACAGTGAAGAACATGC...GGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAGGTCTCATTTCACGTTaGCCTTGCGTCACAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRGLISR*PCVTNW Trigger: CCAGTTTGTGACGCAAGGTCAACGTGAAATGAGACC...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAATGCTTGGCAAGAGCTaGGGTAAGAGGAACAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRMLGKS*GKRNKG Trigger: TCCCTTGTTCCTCTTACCTCAGCTCTTGCCAAGCAT...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGAGAGAGTGCAATACAGGCACAAGACGTGCTTCAAGAGCTGCCACTTTATGCTTGGCAAGAGCTaGGGTAAGAGGAACAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPERVQYRHKTCFKSCHFMLGKS*GKRNKG Trigger: TCCCTTGTTCCTCTTACCTCAGCTCTTGCCAAGCAT...AAAGTGGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTACTTGTGCACAGCTGCTaGAAACAGGACACTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLLVHSC*KQDTDC Trigger: ACAGTCAGTGTCCTGTTTGCAGCAGCTGTGCACAAG...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATGTTTCTTAAGCTTGTaGACAGCTGCTGCAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGCCLTGKAGTDTAELALCFLSL*TAAANR Trigger: CCTGTTTGCAGCAGCTGTGCACAAGCTTAAGAAACA...TAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACGAAGGAGAATGCAGTTaGCTAAGGGATCTTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PVLLLSVWRLLSHREGRHEGECS*LRDLLY Trigger: ATACAGAAGATCCCTTAGGCAACTGCATTCTCCTTC...GTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTAAGTTCTTTCTGGAGTTaGTGTCTGACAGCAGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLSSFWS*CLTAVR Trigger: CCGGACTGCTGTCAGACAGCAACTCCAGAAAGAACT...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCATTCTGACAACTGTTTaGCAAGGCCACACAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGILTTV*QGHTAS Trigger: GCTGGCTGTGTGGCCTTGGCAAACAGTTGTCAGAAT...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCCGGCGCACCAGACTaGATTCTGATTGATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SASLHFWKTARNKQPEKSPGAPD*ILIDPE Trigger: TTCTGGATCAATCAGAATGCAGTCTGGTGCGCCGGG...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCCCCGGCGCACCAGACTaGATTCTGATTGATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFPGAPD*ILIDPE Trigger: TTCTGGATCAATCAGAATGCAGTCTGGTGCGCCGGG...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGACAGTGTATCAGTCACTaGCTCCCAATGCTTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRQCISH*LPMLGK Trigger: CTTGCCAAGCATTGGGAGGCAGTGACTGATACACTG...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCCAAGGCCAGAGAGAGTaGAATACAGGCACAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGQGQRE*NTGTRR Trigger: ACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCTTG...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGATCAGTGTGGTAACTaGAAGAACACAGTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTSSTPFSLAAAVSQGRQDQCGN*KNTVQE Trigger: TTCCTGCACTGTGTTCTTCCAGTTACCACACTGATC...CTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCACAAAGGCCATTCTGTaGTGCACGAGTACAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFTKAIL*CTSTAS Trigger: CGAGGCTGTACTCGTGCACCACAGAATGGCCTTTGT...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTACTTCACCTGTGGCAATaGGTGAGACAGCATATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLLHLWQ*VRQHME Trigger: CTCCATATGCTGTCTCACCCATTGCCACAGGTGAAG...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACTCCACCTTCACCTGTaGCAATGGGTGAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SASLHFWKTARNKQPEKSLHLHL*QWVRQH Trigger: ATGCTGTCTCACCCATTGCCACAGGTGAAGGTGGAG...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCGCAGATACAGCAGAATaGCCTTGGCAGCAGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGADTAE*PWQQHS Trigger: TGAATGCTGCTGCCAAGGCCATTCTGCTGTATCTGC...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCGTGGAGATGCAGAACTaGGGAAGACTAAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFVEMQN*GRLSCW Trigger: CCAACAGCTTAGTCTTCCTCAGTTCTGCATCTCCAC...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGGAGAAACACCTTCTaGCTCTCTCCCTGGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGWRNTF*LSPWSN Trigger: ATTACTCCAGGGAGAGAGTCAGAAGGTGTTTCTCCA...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGACCTGTGGCAATGGGTaGGACAGCATATGGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLTGKAGTDTAELALFRETCGNG*DSIWRN Trigger: GTTTCTCCATATGCTGTCTCACCCATTGCCACAGGT...CTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGATATCAAGGAAACTCTaGGTAATAGGGTCAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSLAAAVSQGRQALILQISRKL*VIGSRE Trigger: CTCTCTTGACCCTATTACTCAGAGTTTCCTTGATAT...CTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACACCACCAGAAATATTCTaGCAACTGTTTGCCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AASWVSESSLLEDCQEQTPPEIF*QLFAKA Trigger: GGCCTTGGCAAACAGTTGTCAGAATATTTCTGGTGG...TGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAGGGCCCTCCAAAACTTaGATGAGTCGTCTAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRGPSKT*MSRLNH Trigger: ATGGTTTAGACGACTCATTCAAGTTTTGGAGGGCCC...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCAGTTCAGTTGTGCATTaGTGTGCTTCATCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASWVSESSLLEDCQEQTASSVVH*CASSAP Trigger: TGGAGCAGATGAAGCACATCAATGCACAACTGAACT...GGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGACACTGTCCATAATTTaGCCAACAAAGGGAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPVLLLSVWRLLSHREGRTLSII*PTKGTA Trigger: TGCAGTTCCCTTTGTTGGTCAAATTATGGACAGTGT...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCTAAGCTGTTGGAACTaGAGCTCCAGTGTGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLTGKAGTDTAELALFRELSCWN*SSSVSS Trigger: AGAGGACACACTGGAGCTGCAGTTCCAACAGCTTAG...CTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGAGCCTCAGGATCATTTaGTGTCCATCTTCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPVLLLSVWRLLSHREGRSLRII*CPSSPN Trigger: ATTTGGAGAAGATGGACAGCAAATGATCCTGAGGCT...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCAAAGCTACGCAAGGCTTaGTCTGCCAGCTCCACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SASLHFWKTARNKQPEKSKLRKA*SASSTN Trigger: ATTAGTGGAGCTGGCAGACCAAGCCTTGCGTAGCTT...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTACAAGGATATCTTCTGTaGACAGCTGCAGTGTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: GGCCLTGKAGTDTAELALQGYLL*TAAVYL Trigger: TAGATACACTGCAGCTGTCCACAGAAGATATCCTTG...TAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCCTTGCGTCACAAACTaGTCAAGGGCAGTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLTGKAGTDTAELALFREPCVTN*SRAVSG Trigger: TCCTGAAACTGCCCTTGACCAGTTTGTGACGCAAGG...CTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGAGAACAGACAGGAACTaGAGGCTGGCAATAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLTGKAGTDTAELALFRERTDRN*RLAIVR Trigger: CCTGACTATTGCCAGCCTCCAGTTCCTGTCTGTTCT...CTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | AAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTGCCACTGTTGGGGCCTaGCCCTCATTTGTTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTARNKQPEKSPVLLLSVATVGA*PSFVLS Trigger: GGACAAAACAAATGAGGGCCAGGCCCCAACAGTGGC...AACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCCAACTGCTGAATGGTaGTGTTCTCTGCAGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CLTGKAGTDTAELALFREPTAEW*CSLQAS Trigger: AGATGCCTGCAGAGAACACCACCATTCAGCAGTTGG...CTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| 3UTR CAA 72 bp | CATCTACACAGTGTATCAGTCACTGCCTCCCAATGCTaGGCAAGAGCTGAGGTAAGAGGAACAAGGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HLHSVSVTASQC*ARAEVRGTRET Trigger: TGTCTCCCTTGTTCCTCTTACCTCAGCTCTTGCCAAGCATTGGGAGGCAGTGACTGATACACTGTGTAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTAAAATTGCTTGTCCAATaGGCAGCATGTCCTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLKLLVQ*AACPLQ Trigger: TTGCAGAGGACATGCTGCTCATTGGACAAGCAATTT...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTAAATTCCACTACAAAGTaGAGACACAGGTTTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGCCLTGKAGTDTAELALNSTTK*RHRFSD Trigger: GTCACTAAACCTGTGTCTTCACTTTGTAGTGGAATT...TAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TACCATGCCAGGTTCCAAGCTATTCTCAGCATATCTGACACCGGCTTCAGGGTCAGTGTGAGGCATGGCTaGATCAAGCATTCTATAACC | + |
|
Preference number: 4 (lower is better) Translates to: YHARFQAILSISDTGFRVSVRHG*IKHSIT Trigger: GGTTATAGAATGCTTGATTCAGCCATGCCTCACACT...GACCCTGAAGCCGGTGTCAGATATGCTGAGAATAGCTTGGAACCTGGCATGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCAAGGCCAGAGAGAGTGCAATACAGGCACAAGACGTGCTTCAAGAGCTTTCATTAAGTCGCTCTaGAGAGCTAAGGCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSQGQRECNTGTRRASRAFIKSL*RAKASL Trigger: CAGGGAAGCCTTAGCTCTTCAGAGCGACTTAATGAA...AGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCTTGGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
||
| CDS-3UTR GCA 90 bp | GTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGATGGTAAGGACCTCTTaGTTCATGACAGTAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VTSSTPFSLAAAVSQGRQMVRTS*FMTVRQ Trigger: TTGTCTTACTGTCATGAAGCAAGAGGTCCTTACCAT...CTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATCTCCAGTGTGTCCTCTaGTTCCAGCTCCGGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADLQCVL*FQLRQI Trigger: GATCTGCCGGAGCTGGAAGCAGAGGACACACTGGAG...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTTATCATTTCTCTGCTaGCTGTTCTCAGCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGLSFLC*LFSAEE Trigger: CTCCTCTGCTGAGAACAGGCAGCAGAGAAATGATAA...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGAGCAGCATGTCCTCTaGAAGCAGTTCCAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKTARNKQPEKSPVLLLSEQHVL*KQFQNS Trigger: AGAGTTCTGGAACTGCTTGCAGAGGACATGCTGCTC...TGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGATTATCACAGCTAGTTaGTCTGCAGCTGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPVLLLSVWRLLSHREGRIITAS*SAADFL Trigger: AAGAAAGTCAGCTGCAGAGCAACTAGCTGTGATAAT...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTGTTTCTCATCTTCAGTaGAAGCAGGAAGTACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSLAAAVSQGRQALILQSVSHLQ*KQEVLV Trigger: TACAAGTACTTCCTGCTTGCACTGAAGATGAGAAAC...ACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTAACCAACAAAGGGAACTaGAGCCAGCTGGAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLTNKGN*SQLENL Trigger: CAAATTTTCCAGCTGGCTGCAGTTCCCTTTGTTGGT...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGTTTGAATTACTCCCTTaGAGTCATGAGATAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTSSTPFSLAAAVSQGRQFELLP*SHEIRP Trigger: TGGCCTTATCTCATGACTGCAAGGGAGTAATTCAAA...CTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTTCCAGATCAGAGTGTaGTTACTACTTCTCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLAAAVSQGRQALILQSFQIRV*LLLLKE Trigger: CTCTTTGAGAAGTAGTAACCACACTCTGATCTGGAA...ACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCAAGGGACCCCAACACTTaGAGCAGTTTCTCTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SASLHFWKTARNKQPEKSRDPNT*SSFSFT Trigger: TGTGAAAGAGAAACTGCTCCAAGTGTTGGGGTCCCT...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTTTTACGGTAGCACATaGTTTCTCCAAGGGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFFYGST*FLQGTP Trigger: TGGGGTCCCTTGGAGAAACCATGTGCTACCGTAAAA...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTACAGGAGTGTGAGGCATaGCTGAATCAAGCATTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLQECEA*LNQAFY Trigger: ATAGAATGCTTGATTCAGCCATGCCTCACACTCCTG...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCTTTCCTCAGTAGTGTaGCCAGAAGGTCAAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPVLLLSVWRLLSHREGRLSSVV*PEGQIN Trigger: ATTTATTTGACCTTCTGGCCACACTACTGAGGAAAG...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTTGAACAGATGCAGATaGTTTCCTTTATTAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASWVSESSLLEDCQEQTALNRCR*FPLLGE Trigger: CTCCCCTAATAAAGGAAATCATCTGCATCTGTTCAA...GGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCATCATCAATCGTCCCTaGAGCAGATACAGCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFIINRP*SRYSRM Trigger: CATTCTGCTGTATCTGCTTCAGGGACGATTGATGAT...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCATAAAAACCAACTGCTaGATGGTGGTGTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGIKTNC*MVVFSA Trigger: TGCAGAGAACACCACCATTCAGCAGTTGGTTTTTAT...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGACTGAAGCAAATGTTATaGAAGATCAGCAGAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRLKQML*KISRGM Trigger: CATGCCTCTGCTGATCTTTCATAACATTTGCTTCAG...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCACTCCCATGATACCATaGCAGGTTCCAAGCTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFTPMIP*QVPSYS Trigger: AGAATAGCTTGGAACCTGGCATGGTATCATGGGAGT...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTGTTGAAAAGCATTTaGAGCATCTCTTGGAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGCCLTGKAGTDTAELALLLKSI*SISWSN Trigger: GTTACTCCAAGAGATGCTGCAAATGCTTTTCAACAA...TAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCACGTGCTTCAAGAGCTaGCACTTTACATTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ASWVSESSLLEDCQEQTATCFKS*HFTFFI Trigger: AATGAAGAATGTAAAGTGGCAGCTCTTGAAGCACGT...GGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAACCTCCTCTTTCATTaGGACAGATGGGAAATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSASLHFWKTARNKQPENLLFH*DRWEIE Trigger: TTCAATTTCCCATCTGTCCCAATGAAAGAGGAGGTT...CTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | AGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTACAGCAGAATGGCCTTaGCAGCAGCATTCACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLPGTNSLRSHQFYSFQFTAEWP*QQHSPH Trigger: ATGAGGTGAATGCTGCTGCCAAGGCCATTCTGCTGT...AAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCATTTGCAGCATCTCTTaGAGTAACTGCCAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGICSIS*SNCQEV Trigger: AACCTCTTGGCAGTTACTCCAAGAGATGCTGCAAAT...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | GAGTGCAATACAGGCACAAGACGTGCTTCAAGAGCTGCCACTTTACATTCTTCAAGAACAGACAGGAACTaGAGGCTGGCAATAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ECNTGTRRASRAATLHSSRTDRN*RLAIVR Trigger: CCTGACTATTGCCAGCCTCCAGTTCCTGTCTGTTCT...TGAAGAATGTAAAGTGGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGGACTTCAGGTTGTTGTaGCAATTCAATTTGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSASLHFWKTARNKQPEDFRLL*QFNLIS Trigger: ACTGATCAAATTGAATTGTCACAACAACCTGAAGTC...CTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | AAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTCAGGAAAGTCTTGCATaGTCACGTCCTTCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTARNKQPEKSPVLLLSVQESLA*SRPSEA Trigger: AGCTTCTGAAGGACGTGATCATGCAAGACTTTCCTG...AACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCAACAATCTTTGGCCTCTaGAGAAAAATCTCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SASLHFWKTARNKQPEKSTIFGL*RKISAG Trigger: TCCTGCTGAGATTTTTCTTCAGAGGCCAAAGATTGT...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | AGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTTATTCTCAGCATATCTaGCACCGGCTTCAGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLPGTNSLRSHQFYSFQFYSQHI*HRLQGQ Trigger: TTGACCCTGAAGCCGGTGTCAGATATGCTGAGAATA...AAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAAATCTCAAGTGGCTTTaGAAGAGGAGAGTGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: WKTARNKQPEKSPVLLLSNLKWL*KRRVCT Trigger: AGTGCACACTCTCCTCTTTCAAAGCCACTTGAGATT...TGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTTTCATTAAGTCGCTCTaGAGAGCTAAGGCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTDTAELALFREQLLYKAFIKSL*RAKASL Trigger: CAGGGAAGCCTTAGCTCTTCAGAGCGACTTAATGAA...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCCAGAGAGAGTGCAATACAGGCACAAGACGTGCTTCAAGAGCTGCCACTTATAAATGCGTCCATGTaGGGTAAAAAGCCAACACTA | + |
|
Preference number: 4 (lower is better) Translates to: KARESAIQAQDVLQELPLINASM*GKKPTL Trigger: TAGTGTTGGCTTTTTACCGCACATGGACGCATTTAT...AAGTGGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
||
| CDS-3UTR GCA 90 bp | GTGCAATACAGGCACAAGACGTGCTTCAAGAGCTGCCACTTTACATTCTTCATTCAGTGTATCAGTCACTaGCTCCCAATGCTTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQYRHKTCFKSCHFTFFIQCISH*LPMLGK Trigger: CTTGCCAAGCATTGGGAGGCAGTGACTGATACACTG...AATGAAGAATGTAAAGTGGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTAAACCATTCGAGCAAATaGAGAAAAAGCAACCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLNHSSK*RKSNLS Trigger: GGAAAGGTTGCTTTTTCTCCATTTGCTCGAATGGTT...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCGACAAAGAAGAATTCTaGGAGACTGTGTCTTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGDKEEF*ETVSCL Trigger: TAGACAAGACACAGTCTCCCAGAATTCTTCTTTGTC...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGCGGCTTTTCAGGACATCTTTaGGGGATATTCCTTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGTNSLRSHQFYSFQFGGFSGHL*GIFLHS Trigger: GCTATGAAGGAATATCCCCCAAAGATGTCCTGAAAA...GCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| 3UTR CAA 72 bp | CAACTTCAACCACAGAATGGCCACAGTGCTGAGATGTaGGTTTCCTCCTTTAGGCAATGTCAGGGACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLQPQNGHSAEM*VSSFRQCQGQE Trigger: TTCTTGTCCCTGACATTGCCTAAAGGAGGAAACCAACATCTCAGCACTGTGGCCATTCTGTGGTTGAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCACACTATCCGTGTATGTaGTCTTCAGTGCAAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTARNKQPEKSPVLLLSHYPCM*SSVQGY Trigger: ATATCCTTGCACTGAAGATCACATACACGGATAGTG...TGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAATCCTCTGGGCAGTTTaGTTCTCACTTTCTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: WKTARNKQPEKSPVLLLSILWAV*FSLSKQ Trigger: CTGTTTAGAAAGTGAGAATCAAACTGCCCAGAGGAT...TGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTTCAGCAGGAAAGTCTTaGATGATCACGTCCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTDTAELALFREQLLYKASAGKS*MITSFR Trigger: TCTGAAGGACGTGATCATGCAAGACTTTCCTGCTGA...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAACGTCCAAAGGAGAATaGACAGATATCCTAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKTARNKQPEKSPVLLLSTSKGE*TDILEF Trigger: GAACTCTAGGATATCTGTGCATTCTCCTTTGGACGT...TGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTACAGGGAGAAGAAGTTaGAACAGTCGAACTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GTDTAELALFREQLLYKATGRRS*NSRTVN Trigger: GTTCACAGTTCGACTGTTGCAACTTCTTCTCCCTGT...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATTGATGTGCTTCATCTaGTCCATACAGTTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: GKAGTDTAELALFREQLLLMCFI*SIQFSM Trigger: CATAGAAAACTGTATGGAGCAGATGAAGCACATCAA...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | AGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTCAGGACTTCAAGAGCTaGGACAAAGAGGATAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLPGTNSLRSHQFYSFQFQDFKS*DKEDRY Trigger: ATACCTATCCTCTTTGTCCCAGCTCTTGAAGTCCTG...AAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CCA 90 bp | CCATCAAAAGCCAAGGCCAGAGAGAGTGCAATACAGGCACAAGACGTGCTTCAACTTTCCTCAGTAGTGTaGCCAGAAGGTCAAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSKAKARESAIQAQDVLQLSSVV*PEGQIN Trigger: ATTTATTTGACCTTCTGGCCACACTACTGAGGAAAG...TTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCTTGGCTTTTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTGGAACTGCAGCCAGCTaGAAAATTTGCAGTATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLPGTNSLRSHQFYSFQFGTAAS*KICSID Trigger: GTCTATACTGCAAATTTTCCAGCTGGCTGCAGTTCC...AAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | AAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTACTTGCTCATCTCTATaGGTAAGTCTAAGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTARNKQPEKSPVLLLSVTCSSL*VSLSSH Trigger: ATGGCTGCTTAGACTTACTCATAGAGATGAGCAAGT...AACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCATTATTATCATTTCTCTaGTGCCTGTTCTCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WKTARNKQPEKSPVLLLSLLSFL*CLFSAE Trigger: CTCTGCTGAGAACAGGCAGCAGAGAAATGATAATAA...TGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | AGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTAGTTGTGCATTGATGTaGTTCATCTGCTCCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: RLPGTNSLRSHQFYSFQFSCALM*FICSIQ Trigger: CTGTATGGAGCAGATGAAGCACATCAATGCACAACT...AAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR GCA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCAGTGCTGTAGAAAGTTaGTCTTTTGAATTACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFSAVES*SFELLP Trigger: AGGGAGTAATTCAAAAGAGCAACTTTCTACAGCACT...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CCA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTATAATGCTGCTGACATaGACTCTGGCAAAAACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTDTAELALFREQLLYKAIMLLT*TLAKTH Trigger: GTGAGTTTTTGCCAGAGTCCATGTCAGCAGCATTAT...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CCA 90 bp | GATACTTCATCGAACAATAGAAGACAAAACAATGCCCCGACTTCAGCCACCACACAGGAGTGTGAGGCATaGCTGAATCAAGCATTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: DTSSNNRRQNNAPTSATTQECEA*LNQAFY Trigger: ATAGAATGCTTGATTCAGCCATGCCTCACACTCCTG...TGTGGTGGCTGAAGTCGGGGCATTGTTTTGTCTTCTATTGTTCGATGAAGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| 3UTR CAA 72 bp | ATCCACCGTGCTACAGAGGAGTTCTATGAGATGAGCTaGTTGAAAAGCATTTGCAGCATCTCTTGGAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IHRATEEFYEMS*LKSICSISWSN Trigger: GTTACTCCAAGAGATGCTGCAAATGCTTTTCAACAAGCTCATCTCATAGAACTCCTCTGTAGCACGGTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAGAAGGCTTATCAGAAAGAGTATCAGACCATGTATCCATTCTTGATACTTCCTTCCTCAGGAGTGTaGGGCATGGCTGAATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKKAYQKEYQTMYPFLILPSSGV*GMAESS Trigger: GCTTGATTCAGCCATGCCTCACACTCCTGAGGAAGG...AAGTATCAAGAATGGATACATGGTCTGATACTCTTTCTGATAAGCCTTCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| CDS-3UTR GCA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGGTGGTACTTCCATCTaGTGGAAATTACTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDTAELALFREQLLYKAGGTSI*WKLLLS Trigger: AGACAAAAGTAATTTCCAGCAGATGGAAGTACCACC...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR GCA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTATAAATGCGTCCATGTaGGGTAAAAAGCCAACACTA | + |
|
Preference number: 4 (lower is better) Translates to: GTDTAELALFREQLLYKAINASM*GKKPTL Trigger: TAGTGTTGGCTTTTTACCGCACATGGACGCATTTAT...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR GCA 90 bp | AAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTCAGTTTCTTAGGAGCTaGATGGTGATGCTTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTARNKQPEKSPVLLLSVQFLRS*MVMLNS Trigger: AGAATTAAGCATCACCATGCAGCTCCTAAGAAACTG...AACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATCCATTGTTTCTGAGGTaGAAAGAGAGCTTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADPLFLR*KESLAH Trigger: ATGAGCCAAGCTCTCTTTCCACCTCAGAAACAATGG...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| 3UTR CAA 72 bp | ATGTTTATATTGTCAGAATTCTGTCTTTGCAGCATCTaGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MFILSEFCLCSI*GQRVFTSGRLP Trigger: TGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGCTGCAAAGACAGAATTCTGACAATATAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023828.9 ENSMUST00000236676.2 |
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| CDS-3UTR TCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATACAGGTGCATTCAATTaGATAAACAGCCTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADTGAFN*INSLCS Trigger: ACTGCAGAGGCTGTTTATTCAATTGAATGCACCTGT...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR TCA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTAGATTTCCAGATCTTTaGACAGATGCAGATGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTDTAELALFREQLLYKARFPDL*TDADDF Trigger: GAAATCATCTGCATCTGTTCAAAGATCTGGAAATCT...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR TCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATATACCTTCTAAAGACTaGAACCGGCAAACTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADIPSKD*NRQTED Trigger: GTCTTCAGTTTGCCGGTTTCAGTCTTTAGAAGGTAT...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR TCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATATCTCATGGGATAAGTaGAGTAAGCAAAGACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADISWDK*SKQRPV Trigger: CACAGGTCTTTGCTTACTTCACTTATCCCATGAGAT...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR TCA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTCCATACAGTTTTCTATaGGATCAGATCTCAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTDTAELALFREQLLYKAPYSFL*DQISKH Trigger: ATGCTTTGAGATCTGATCTCATAGAAAACTGTATGG...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR GCA 90 bp | GATACTTCATCGAACAATAGAAGACAAAACAATGCCCCGACTTCAGCCACCACAATTATCACAGCTAGTTaGTCTGCAGCTGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTSSNNRRQNNAPTSATTIITAS*SAADFL Trigger: AAGAAAGTCAGCTGCAGAGCAACTAGCTGTGATAAT...TGTGGTGGCTGAAGTCGGGGCATTGTTTTGTCTTCTATTGTTCGATGAAGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
||
| CDS-3UTR GCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATGTCAGGGACAAGAAGTaGTGTAGAAAGTTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADVRDKK*CRKLLF Trigger: AAAGAGCAACTTTCTACAGCACTTCTTGTCCCTGAC...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CCA 90 bp | AGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTTTCAAAGAGCTTTCATTaGAAGAGAGAACATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLPGTNSLRSHQFYSFQFSKSFH*KREHVC Trigger: ACAGACATGTTCTCTCTTCCAATGAAAGCTCTTTGA...AAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATGCCCTGAACAATCTTTaGCCTCTGAAGAAAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADALNNL*PLKKNL Trigger: GAGATTTTTCTTCAGAGGCCAAAGATTGTTCAGGGC...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| 3UTR CAA 72 bp | GATGACATTAGTGATAAGAGGTTTCAAGAGCTCATCTaGTGTCACAAGTTTAGGCTCTACCAACAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DDISDKRFQELI*CHKFRLYQQTG Trigger: TCCTGTCTGTTGGTAGAGCCTAAACTTGTGACACAAGATGAGCTCTTGAAACCTCTTATCACTAATGTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236676.2 |
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| CDS-3UTR TCA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATGGTCTCTGTAAAAGTTaGGTCTGTTTCTTAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TDTAELALFREQLLYKADGLCKS*VCFLSL Trigger: CAAGCTTAAGAAACAGACTCAACTTTTACAGAGACC...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| 3UTR CAA 72 bp | GCTTATCAGAAAGAGTATCAGACCATGTATCCATTCTaGATACTTCATCGAACAATAGAAGACAAAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: AYQKEYQTMYPF*ILHRTIEDKTM Trigger: CATTGTTTTGTCTTCTATTGTTCGATGAAGTATCAAGAATGGATACATGGTCTGATACTCTTTCTGATAAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236313.2 |
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| CDS GCA 90 bp | ACACTGCATCCCAGTCCTGACCATCTCCTCGGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCCGAGAGCTACTGCTTCCCGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TLHPSPDHLLGVAGL*AQPQKAESYCFPGM Trigger: CATCCCCGGGAAGCAGTAGCTCTCGGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCCGAGGAGATGGTCAGGACTGGGATGCAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | AGCCAAGGCCAGAGAGAGTGCAATACAGGCACAAGACGTGCTTCAAGAGCTGCCGAAGTAAGGCCACTGTaGGGGCCTGGCCCTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQGQRECNTGTRRASRAAEVRPL*GPGPHL Trigger: CAAATGAGGGCCAGGCCCCAACAGTGGCCTTACTTC...GGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
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| CDS TCA 90 bp | GTGGCTTTGAAAGAGGAGAGTGTGCACTCCACCCAGGGAAGGCAGTaGGGTGAGCCATCCCTGCTAAGGTCCTCTCCAATGAAGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VALKEESVHSTQGRQ*GEPSLLRSSPMKVS Trigger: GCTTACCTTCATTGGAGAGGACCTTAGCAGGGATGGCTCACCTCACTGCCTTCCCTGGGTGGAGTGCACACTCTCCTCTTTCAAAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 90 bp | TGTGCGCCCAACCACAGAAGGCCGAGAGCTACTGCTTCCCGGGGATaGGTTTGGGGAATGGTAAGGACCTCTTGCTTCATGACAGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CAPNHRRPRATASRG*VWGMVRTSCFMTVR Trigger: TCTTACTGTCATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGCTCTCGGCCTTCTGTGGTTGGGCGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | CCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACGAACATGTCTGTCTGTaGTGGTCAGGGGTAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PVLLLSVWRLLSHREGRHEHVCL*WSGVAK Trigger: CTTGGCTACCCCTGACCACAACAGACAGACATGTTC...GTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | CCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGTGGCCCTCATTTGTTTaGTCCTTGTCCTGGACACGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSLAAAVSQGRQALILQWPSFV*SLSWTR Trigger: GCGTGTCCAGGACAAGGACAAAACAAATGAGGGCCA...CTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 90 bp | CTCCAGGAGACCGGACAAGTACTTCCCACAAATCTCAAGTGGCTTTaGAAGAGGAGAGTGTGCACTCCACCCAGGGAAGGCAGTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQETGQVLPTNLKWL*KRRVCTPPREGSEV Trigger: CACCTCACTGCCTTCCCTGGGTGGAGTGCACACTCTCCTCTTTCAAAGCCACTTGAGATTTGTGGGAAGTACTTGTCCGGTCTCCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 90 bp | GGGCAGTGCAGGGGAGAGCGCCTTCTCCTGCCTCAGAGCTCACTTTaGTTAGAAGGAGAATGCAGTTGCCTAAGGGATCTTCTGTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQCRGERLLLPQSSL*LEGECSCLRDLLYQ Trigger: CTGATACAGAAGATCCCTTAGGCAACTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGGCAGGAGAAGGCGCTCTCCCCTGCACTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | TCACCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGGAGTACAGCCTCGGCTaGCTCCATGCTAAAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPVLLLSVWRLLSHREGREYSLG*LHAKTG Trigger: ACCAGTTTTAGCATGGAGCAAGCCGAGGCTGTACTC...CCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | GGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTTCAGGAAGAAGTGTaGACGGCAGCAGGGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGCCLTGKAGTDTAELALFQEEV*TAAGAE Trigger: TTCAGCCCCTGCTGCCGTCAACACTTCTTCCTGAAA...TAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | AGGCCAGAGAGAGTGCAATACAGGCACAAGACGTGCTTCAAGAGCTGCCACTTTGTCAGGGCAGGGCACTaGAATGAGAGGCCCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: RPERVQYRHKTCFKSCHFVRAGH*NERPTH Trigger: ATGTGTGGGCCTCTCATTCAAGTGCCCTGCCCTGAC...AAAGTGGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
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| CDS GCA 90 bp | GTGCACAGCTGCTGCAAACAGGACACTGACTGTAATGCTAGACGATaGTTCCCATCTCCTCCGAAGGCCAGCTTCACCAGACACAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHSCCKQDTDCNARR*FPSPPKASFTRHKR Trigger: CCTTTTGTGTCTGGTGAAGCTGGCCTTCGGAGGAGATGGGAAGCATCGTCTAGCATTACAGTCAGTGTCCTGTTTGCAGCAGCTGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 90 bp | CCCAACCACAGAAGGCCGAGAGCTACTGCTTCCCGGGGATGGGTTTaGGGAATGGTAAGGACCTCTTGCTTCATGACAGTAAGACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PNHRRPRATASRGWV*GMVRTSCFMTVRQR Trigger: TCTTTGTCTTACTGTCATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGCTCTCGGCCTTCTGTGGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | TTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACTGATACTGCAGAGTCTCAGCAGGAAAGTCTaGCATGATCACGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSLAAAVSQGRQALILQSLSRKV*HDHVLQ Trigger: CTGAAGGACGTGATCATGCAAGACTTTCCTGCTGAG...ACTCTGCAGTATCAGTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTTCCCGGGGATGGGTTaGGGGAATGGTAAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFFPGMG*GNGKDL Trigger: GAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAA...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 90 bp | ATTCTGAAGAATAAATGCAGCCTCCCGGCGCACCAGACTGCATTCTaGTTGATCCAGAAGAATGTTCACCACGGTTCCCCAGAGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ILKNKCSLPAHQTAF*LIQKNVHHGSPEPT Trigger: GGTGGGCTCTGGGGAACCGTGGTGAACATTCTTCTGGATCAATCAGAATGCAGTCTGGTGCGCCGGGAGGCTGCATTTATTCTTCAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 90 bp | TGTCCTCTGCAAGCAGTTCCAGAACTCTTATTATCATTTCTCTGCTaGCTGTTCTCAGCAGAGGAGCTGCTGCCTCCAGGGTGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: CPLQAVPELLLSFLC*LFSAEELLPPGWRC Trigger: GCATCTCCACCCTGGAGGCAGCAGCTCCTCTGCTGAGAACAGGCAGCAGAGAAATGATAATAAGAGTTCTGGAACTGCTTGCAGAGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 90 bp | GCATGTCCTCTGCAAGCAGTTCCAGAACTCTTATTATCATTTCTCTaGTGCCTGTTCTCAGCAGAGGAGCTGCTGCCTCCAGGGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ACPLQAVPELLLSFL*CLFSAEELLPPGWR Trigger: TCTCCACCCTGGAGGCAGCAGCTCCTCTGCTGAGAACAGGCAGCAGAGAAATGATAATAAGAGTTCTGGAACTGCTTGCAGAGGACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 90 bp | GAGCGCCTTCTCCTGCCTCAGAGCTCACTTTGCTTAGAAGGAGAATaGAGTTGCCTAAGGGATCTTCTGTATCAGCGTAGCCCTGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ERLLLPQSSLCLEGE*SCLRDLLYQRSPVA Trigger: TGCTACAGGGCTACGCTGATACAGAAGATCCCTTAGGCAACTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGGCAGGAGAAGGCGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGAGAGAGTGCAATACAGGCACAAGACGTGCTTCAAGAGCTGCCACTTTTGGCCCTCATTTGTTTaGTCCTTGTCCTGGACACGC | + |
|
Preference number: 5 (lower is better) Translates to: RPERVQYRHKTCFKSCHFWPSFV*SLSWTR Trigger: GCGTGTCCAGGACAAGGACAAAACAAATGAGGGCCA...AAAGTGGCAGCTCTTGAAGCACGTCTTGTGCCTGTATTGCACTCTCTCTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237640.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTTCTACTCCTTTCAGTTTGGCGGCTGCTGTCTCACAGGGAAGGCAGGCACCTCAAAGAGCTTTCATaGGAAGAGAGAACATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLLLSVWRLLSHREGRHLKELS*EERTCL Trigger: CAGACATGTTCTCTCTTCCAATGAAAGCTCTTTGAG...GTGCCTGCCTTCCCTGTGAGACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | AAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTGAAGTAAGGCCACTGTaGGGGCCTGGCCCTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: KTARNKQPEKSPVLLLSVEVRPL*GPGPHL Trigger: CAAATGAGGGCCAGGCCCCAACAGTGGCCTTACTTC...AACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGGTGACAACAGGGCATTaGCAGCAACTCTTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGSASLHFWKTARNKQPEVTTGH*QQLFSG Trigger: TCCTGAAAAGAGTTGCTGCAAATGCCCTGTTGTCAC...CTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGCACAGTGCTGAGATGTaGGTTTCCTCCTTTAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGSASLHFWKTARNKQPEHSAEM*VSSFRQ Trigger: TTGCCTAAAGGAGGAAACCAACATCTCAGCACTGTG...CTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 90 bp | ATCCACTCCGAGCCTGGTGCCTGGACTATCATCTCATGGGATAAGTaGAGTAAGCAAAGACCTGTGCTCTTTGTAACGCCTTTCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: IHSEPGAWTIISWDK*SKQRPVLFVTPFPM Trigger: CATGGGGAAAGGCGTTACAAAGAGCACAGGTCTTTGCTTACTTCACTTATCCCATGAGATGATAGTCCAGGCACCAGGCTCGGAGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 90 bp | GCTACTGCTTCCCGGGGATGGGTTTGGGGAATGGTAAGGACCTCTTaGTTCATGACAGTAAGACAAAGAAGAATTCTGGGAGACTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ATASRGWVWGMVRTS*FMTVRQRRILGDCV Trigger: GACACAGTCTCCCAGAATTCTTCTTTGTCTTACTGTCATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 90 bp | TCTTATTATCATTTCTCTGCTGCCTGTTCTCAGCAGAGGAGCTGCTaGCTCCAGGGTGGAGATGCAGAACTGAGGAAGACTAAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SYYHFSAACSQQRSC*LQGGDAELRKTKLL Trigger: CAACAGCTTAGTCTTCCTCAGTTCTGCATCTCCACCCTGGAGGCAGCAGCTCCTCTGCTGAGAACAGGCAGCAGAGAAATGATAATAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 90 bp | AACTCTTATTATCATTTCTCTGCTGCCTGTTCTCAGCAGAGGAGCTaGTGCCTCCAGGGTGGAGATGCAGAACTGAGGAAGACTAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSYYHFSAACSQQRS*CLQGGDAELRKTKL Trigger: CAGCTTAGTCTTCCTCAGTTCTGCATCTCCACCCTGGAGGCAGCAGCTCCTCTGCTGAGAACAGGCAGCAGAGAAATGATAATAAGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 90 bp | CTTCTCCTGCCTCAGAGCTCACTTTGCTTAGAAGGAGAATGCAGTTaGCTAAGGGATCTTCTGTATCAGCGTAGCCCTGTAGCACTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLPQSSLCLEGECS*LRDLLYQRSPVALE Trigger: TTCCAGTGCTACAGGGCTACGCTGATACAGAAGATCCCTTAGGCAACTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGGCAGGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 90 bp | AACAGTCGAACTGTGAACAGTGAGATGCTGACAAAGGCCATTCTGTaGTGCACGAGTACAGCCTCGGCTTGCTCCATGCTAAAACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NSRTVNSEMLTKAIL*CTSTASACSMLKLV Trigger: AACCAGTTTTAGCATGGAGCAAGCCGAGGCTGTACTCGTGCACCACAGAATGGCCTTTGTCAGCATCTCACTGTTCACAGTTCGACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 90 bp | CTTTACAATCTCCAGGCAGCACTGGTAAGTCTCCACCTTCACCTGTaGCAATGGGTGAGACAGCATATGGAGAAACACCTTCTGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LYNLQAALVSLHLHL*QWVRQHMEKHLLTL Trigger: GAGAGTCAGAAGGTGTTTCTCCATATGCTGTCTCACCCATTGCCACAGGTGAAGGTGGAGACTTACCAGTGCTGCCTGGAGATTGTAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTAGTCTGTTTCTTAAGCTaGTGCACAGCTGCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GKAGTDTAELALFREQLLVCFLS*CTAAAN Trigger: GTTTGCAGCAGCTGTGCACAAGCTTAAGAAACAGAC...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCATATTCTGACAACTGTTaGCCAAGGCCACACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SASLHFWKTARNKQPEKSYSDNC*PRPHSQ Trigger: CTGGCTGTGTGGCCTTGGCAAACAGTTGTCAGAATA...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS TCA 90 bp | CTTTTCAACAGGGAGAAGAAGTTGCAACAGTCGAACTGTGAACAGTaGGATGCTGACAAAGGCCATTCTGTGGTGCACGAGTACAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFNREKKLQQSNCEQ*DADKGHSVVHEYSL Trigger: GAGGCTGTACTCGTGCACCACAGAATGGCCTTTGTCAGCATCTCACTGTTCACAGTTCGACTGTTGCAACTTCTTCTCCCTGTTGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 90 bp | TCGATAAACTTGTTCCAGGTCAGAGCTGTCATCATCAATCGTCCCTaGAGCAGATACAGCAGAATGGCCTTGGCAGCAGCATTCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SINLFQVRAVIINRP*SRYSRMALAAAFTS Trigger: TGAGGTGAATGCTGCTGCCAAGGCCATTCTGCTGTATCTGCTTCAGGGACGATTGATGATGACAGCTCTGACCTGGAACAAGTTTATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS TCA 90 bp | AGAAGAATGTTCACCACGGTTCCCCAGAGCCCACCAGAAATATTCTaGCAACTGTTTGCCAAGGCCACACAGCCAGCTTCAATAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRMFTTVPQSPPEIF*QLFAKATQPASIVV Trigger: GACTACTATTGAAGCTGGCTGTGTGGCCTTGGCAAACAGTTGTCAGAATATTTCTGGTGGGCTCTGGGGAACCGTGGTGAACATTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | GCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCAAGTTGTGCTCAATCTaGCACAGGATACTTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASWVSESSLLEDCQEQTAKLCSI*HRILLR Trigger: CCTCAAAAGTATCCTGTGCAAGATTGAGCACAACTT...GGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTTACAGCAGAATGGCCTaGGCAGCAGCATTCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTDTAELALFREQLLYKAYSRMA*AAAFTS Trigger: TGAGGTGAATGCTGCTGCCAAGGCCATTCTGCTGTA...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATGTCAGGGCAGGGCACTaGAATGAGAGGCCCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: TDTAELALFREQLLYKADVRAGH*NERPTH Trigger: ATGTGTGGGCCTCTCATTCAAGTGCCCTGCCCTGAC...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 90 bp | GAGAAGCCAGTTTCAGGATACACAGTATCAGGGAGCTACTGGGGGTaGCTCTGTGTGCAGTTTGAATACACTGTCCATAATTTGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: EKPVSGYTVSGSYWG*LCVQFEYTVHNLTN Trigger: GTTGGTCAAATTATGGACAGTGTATTCAAACTGCACACAGAGGCACCCCCAGTAGCTCCCTGATACTGTGTATCCTGAAACTGGCTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 90 bp | GATAACCGGGTCAGCGTACAAAACCTTCCTCAGGAGTGTGAGGCATaGCTGAATCAAGCATTCTATAACCTCACCATCTTGACCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: DNRVSVQNLPQECEA*LNQAFYNLTILTHK Trigger: TTTGTGGGTCAAGATGGTGAGGTTATAGAATGCTTGATTCAGCCATGCCTCACACTCCTGAGGAAGGTTTTGTACGCTGACCCGGTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 90 bp | GCATCTGAGAAGCCAGTTTCAGGATACACAGTATCAGGGAGCTACTaGGGGTGCCTCTGTGTGCAGTTTGAATACACTGTCCATAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASEKPVSGYTVSGSY*GCLCVQFEYTVHNL Trigger: CAAATTATGGACAGTGTATTCAAACTGCACACAGAGGCACCCCCAGTAGCTCCCTGATACTGTGTATCCTGAAACTGGCTTCTCAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACTGGGAGACTGTGTCTaGTCTACTGGAGAAAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SASLHFWKTARNKQPEKSLGDCV*STGEKV Trigger: AACTTTTTCTCCAGTAGACAAGACACAGTCTCCCAG...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAATGGTAAGGACCTCTaGCTTCATGACAGTAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRNGKDL*LHDSKT Trigger: TGTCTTACTGTCATGAAGCAAGAGGTCCTTACCATT...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS-3UTR CAA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGCCTCAGAGCTCACTTaGCTTAGAAGGAGAATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTDTAELALFREQLLYKAASELT*LRRRMQ Trigger: CTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGGC...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | GCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCACCAGTAACAAGGAATaGAGAAGACTGATCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASWVSESSLLEDCQEQTATSNKE*RRLISS Trigger: AGAACTGATCAGTCTTCTCAATTCCTTGTTACTGGT...GGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | GGGAAGGCAGGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACACTGTCCATAATTaGACCAACAAAGGGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKAGTDTAELALFREQLLYTVHN*TNKGNC Trigger: GCAGTTCCCTTTGTTGGTCAAATTATGGACAGTGTA...TAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCCTGCCTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAGCCTCTGTGTGCAGTTaGAATACACTGTCCATAATT | + |
|
Preference number: 5 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRASVCS*NTLSII Trigger: AATTATGGACAGTGTATTCAAACTGCACACAGAGGC...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 90 bp | ACCAGTAACAAGGAATTGAGAAGACTGATCAGTTCTTTCTGGAGTTaGTGTCTGACAGCAGTCCGGACGTCATCTGTTTCTTCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSNKELRRLISSFWS*CLTAVRTSSVSSPA Trigger: TGCAGGAGAAGAAACAGATGACGTCCGGACTGCTGTCAGACAGCAACTCCAGAAAGAACTGATCAGTCTTCTCAATTCCTTGTTACTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | TGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCATGGGGTCTTGAGTTCTaGGATGCACATTTCTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: WKTARNKQPEKSPVLLLSWGLEF*DAHFYE Trigger: CTCATAGAAATGTGCATCCAAGAACTCAAGACCCCA...TGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | TCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACTCTTGTGCTTGTACTaGCTCATCTCTATGAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SASLHFWKTARNKQPEKSLLCLY*LISMSK Trigger: CTTACTCATAGAGATGAGCAAGTACAAGCACAAGAG...TGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | GCAGCATCTTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGGTTTTCTTCTGAGTTaGAGAGAGTTCTCTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: AASWVSESSLLEDCQEQTGFLLS*REFSLL Trigger: TAGCAAAGAGAACTCTCTCAAACTCAGAAGAAAACC...TGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAAGATGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 90 bp | TCAGAGCTGTCATCATCAATCGTCCCTGAAGCAGATACAGCAGAATaGCCTTGGCAGCAGCATTCACCTCATTTTTGGATTCTTGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SELSSSIVPEADTAE*PWQQHSPHFWILEY Trigger: GTATTCAAGAATCCAAAAATGAGGTGAATGCTGCTGCCAAGGCCATTCTGCTGTATCTGCTTCAGGGACGATTGATGATGACAGCTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | TTGGGTCAGCGAGTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGATGCTGGAAATTACTTTaGTCTTGGGGAAAATATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGQRVFTSGRLPGTNSLRCWKLL*SWGKYP Trigger: AGGATATTTTCCCCAAGACAAAAGTAATTTCCAGCA...TCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGACTCGCTGACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | AAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCTACTCCTTTCAGTTAGAGATTCGATAAACTaGTTCCAGGTCAGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KTARNKQPEKSPVLLLSVRDSIN*FQVRAV Trigger: GACAGCTCTGACCTGGAACAAGTTTATCGAATCTCT...AACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | ACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTGATGGGGCCCTCCAAAACTaGAATGAGTCGTCTAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TDTAELALFREQLLYKADGALQN*NESSKP Trigger: TGGTTTAGACGACTCATTCAAGTTTTGGAGGGCCCC...ATCAGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 90 bp | CTGTCATCATCAATCGTCCCTGAAGCAGATACAGCAGAATGGCCTTaGCAGCAGCATTCACCTCATTTTTGGATTCTTGAATACCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSIVPEADTAEWP*QQHSPHFWILEYQM Trigger: CATTTGGTATTCAAGAATCCAAAAATGAGGTGAATGCTGCTGCCAAGGCCATTCTGCTGTATCTGCTTCAGGGACGATTGATGATGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | GGCACTGATACTGCAGAGTTAGCATTATTCAGGGAGCAGCTGCTATACAAAGCTCAGAGACAGCTGTGTTaGGAAAACGTAAAACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTDTAELALFREQLLYKAQRQLC*ENVKQF Trigger: GAACTGTTTTACGTTTTCCAAACACAGCTGTCTCTG...AGCTTTGTATAGCAGCTGCTCCCTGAATAATGCTAACTCTGCAGTATCAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS-3UTR CAA 90 bp | GTCTTCACTTCTGGAAGACTGCCAGGAACAAACAGCCTGAGAAGTCACCAGTTCACATCTAATACATCTTaGGGACACACAATGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: VFTSGRLPGTNSLRSHQFTSNTS*GHTMRT Trigger: AGTTCTCATTGTGTGTCCCAAAGATGTATTAGATGT...GAACTGGTGACTTCTCAGGCTGTTTGTTCCTGGCAGTCTTCCAGAAGTGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 90 bp | TGTGGTAACTGGAAGAACACAGTGCAGGAACTTCTGAAGGAAGAATaGAAAGTCCATCGAGAATGCCATCAATCTCAGCCTGTATTACTG | + |
|
Preference number: 5 (lower is better) Translates to: CGNWKNTVQELLKEE*KVHRECHQSQPVLL Trigger: CAGTAATACAGGCTGAGATTGATGGCATTCTCGATGGACTTTTCATTCTTCCTTCAGAAGTTCCTGCACTGTGTTCTTCCAGTTACCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 90 bp | AATTTGATCAGTGTGGTAACTGGAAGAACACAGTGCAGGAACTTCTaGAGGAAGAATGAAAAGTCCATCGAGAATGCCATCAATCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLISVVTGRTQCRNF*RKNEKSIENAINLS Trigger: GCTGAGATTGATGGCATTCTCGATGGACTTTTCATTCTTCCTTCAGAAGTTCCTGCACTGTGTTCTTCCAGTTACCACACTGATCAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 90 bp | AAAGGCTGTTATCATCCCAGATTTCTGATGAAATTGCTTGTCCAATaGGCAGCATGTCCTCTGCAAGCAGTTCCAGAACTCTTATTATCA | + |
|
Preference number: 5 (lower is better) Translates to: KGCYHPRFLMKLLVQ*AACPLQAVPELLLS Trigger: TGATAATAAGAGTTCTGGAACTGCTTGCAGAGGACATGCTGCTCATTGGACAAGCAATTTCATCAGAAATCTGGGATGATAACAGCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS TCA 90 bp | TTAACAAGTTCAGAACCTCCTCTTTCATTGGGACAGATGGGAAATTaGACCATTCGAGCAAATGGAGAAAAAGCAACCTTTCCTGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LTSSEPPLSLGQMGN*TIRANGEKATFPES Trigger: TGATTCAGGAAAGGTTGCTTTTTCTCCATTTGCTCGAATGGTTCAATTTCCCATCTGTCCCAATGAAAGAGGAGGTTCTGAACTTGTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 90 bp | AGGTGCATTCAATTGAATAAACAGCCTCTGCAGTTCGCTTATAAATaGTGTAATTTTCAGAATCCAGCTGTTCCAAATAAGCCACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RCIQLNKQPLQFAYK*CNFQNPAVPNKPQL Trigger: CAGTTGTGGCTTATTTGGAACAGCTGGATTCTGAAAATTACAGCATTTATAAGCGAACTGCAGAGGCTGTTTATTCAATTGAATGCACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 90 bp | TGTCCAATAATCTTCTCAACTAAGCATAACTTTTTCACCACTGTATaGATTTTAATATCTTGCATTATCACAGCTAGTTGCTCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPIIFSTKHNFFTTV*ILISCIITASCSAA Trigger: AGCTGCAGAGCAACTAGCTGTGATAATGCAAGATATTAAAATGCATACAGTGGTGAAAAAGTTATGCTTAGTTGAGAAGATTATTGGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 72 bp | CCCAGTCCTGACCATCTCCTCGGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCCGAGAGCTACTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSPDHLLGVAGL*AQPQKAESYCF Trigger: GAAGCAGTAGCTCTCGGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCCGAGGAGATGGTCAGGACTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 72 bp | GGCCTGTGCGCCCAACCACAGAAGGCCGAGAGCTACTaGTTCCCGGGGATGGGTTTGGGGAATGGTAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLCAQPQKAESY*FPGMGLGNGKD Trigger: GTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGCTCTCGGCCTTCTGTGGTTGGGCGCACAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS GCA 72 bp | CTAGCAAAAGCCGTAGCACAGACTTCAGCCGGGCAGTaGAGGGGAGAGCGCCTTCTCCTGCCTCAGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LAKAVAQTSAGQ*RGERLLLPQSS Trigger: TGAGCTCTGAGGCAGGAGAAGGCGCTCTCCCCTGCACTGCCCGGCTGAAGTCTGTGCTACGGCTTTTGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS CAA 90 bp | TGCTGCCTCCAGGGTGGAGATGCAGAACTGAGGAAGACTAAGCTGTaGGAACTGCAGCTCCAGTGTGTCCTCTGCTTCCAGCTCCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CCLQGGDAELRKTKL*ELQLQCVLCFQLRQ Trigger: CTGCCGGAGCTGGAAGCAGAGGACACACTGGAGCTGCAGTTCCAACAGCTTAGTCTTCCTCAGTTCTGCATCTCCACCCTGGAGGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
||
| CDS TCA 72 bp | GGAGAGTGTGCACTCCACCCAGGGAAGGCAGTGAGGTaGGCCATCCCTGCTAAGGTCCTCTCCAATGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GECALHPGKAVR*AIPAKVLSNEG Trigger: ACCTTCATTGGAGAGGACCTTAGCAGGGATGGCTCACCTCACTGCCTTCCCTGGGTGGAGTGCACACTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | AAAGAGGAGAGTGTGCACTCCACCCAGGGAAGGCAGTaGGGTGAGCCATCCCTGCTAAGGTCCTCTCCAATG | + |
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Preference number: 6 (lower is better) Translates to: KEESVHSTQGRQ*GEPSLLRSSPM Trigger: CATTGGAGAGGACCTTAGCAGGGATGGCTCACCTCACTGCCTTCCCTGGGTGGAGTGCACACTCTCCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 72 bp | CAAGGAAACACAGAGAACCTCAGCCACTTCACAGCCTaGTTTCCCGCTGGCCCTGGTGGTACTTCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: QGNTENLSHFTA*FPAGPGGTSIC Trigger: GCAGATGGAAGTACCACCAGGGCCAGCGGGAAACCAGGCTGTGAAGTGGCTGAGGTTCTCTGTGTTTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | AATGCAGCCTCCCGGCGCACCAGACTGCATTCTGATTaGTCCAGAAGAATGTTCACCACGGTTCCCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: NAASRRTRLHSD*SRRMFTTVPQS Trigger: GCTCTGGGGAACCGTGGTGAACATTCTTCTGGATCAATCAGAATGCAGTCTGGTGCGCCGGGAGGCTGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 72 bp | AACCACAGAAGGCCGAGAGCTACTGCTTCCCGGGGATaGGTTTGGGGAATGGTAAGGACCTCTTGCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: NHRRPRATASRG*VWGMVRTSCFM Trigger: CATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGCTCTCGGCCTTCTGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 72 bp | CAGAAGGCCGAGAGCTACTGCTTCCCGGGGATGGGTTaGGGGAATGGTAAGGACCTCTTGCTTCATGACAGT | + |
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Preference number: 6 (lower is better) Translates to: QKAESYCFPGMG*GNGKDLLLHDS Trigger: ACTGTCATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGCTCTCGGCCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 90 bp | GCCCAACCACAGAAGGCCGAGAGCTACTGCTTCCCGGGGATGGGTTaGGGGAATGGTAAGGACCTCTTGCTTCATGACAGTAAGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: AQPQKAESYCFPGMG*GNGKDLLLHDSKTK Trigger: CTTTGTCTTACTGTCATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGCTCTCGGCCTTCTGTGGTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 90 bp | CGGGCAGTGCAGGGGAGAGCGCCTTCTCCTGCCTCAGAGCTCACTTaGCTTAGAAGGAGAATGCAGTTGCCTAAGGGATCTTCTGTATCA | + |
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Preference number: 6 (lower is better) Translates to: RAVQGRAPSPASELT*LRRRMQLPKGSSVS Trigger: TGATACAGAAGATCCCTTAGGCAACTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGGCAGGAGAAGGCGCTCTCCCCTGCACTGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 72 bp | TATCATTTCTCTGCTGCCTGTTCTCAGCAGAGGAGCTaGTGCCTCCAGGGTGGAGATGCAGAACTGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: YHFSAACSQQRS*CLQGGDAELRK Trigger: CTTCCTCAGTTCTGCATCTCCACCCTGGAGGCAGCAGCTCCTCTGCTGAGAACAGGCAGCAGAGAAATGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 72 bp | AGAAGGCCGAGAGCTACTGCTTCCCGGGGATGGGTTTaGGGAATGGTAAGGACCTCTTGCTTCATGACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RRPRATASRGWV*GMVRTSCFMTV Trigger: TACTGTCATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGCTCTCGGCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 72 bp | CAGGGTGGAGATGCAGAACTGAGGAAGACTAAGCTGTaGGAACTGCAGCTCCAGTGTGTCCTCTGCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QGGDAELRKTKL*ELQLQCVLCFQ Trigger: CTGGAAGCAGAGGACACACTGGAGCTGCAGTTCCAACAGCTTAGTCTTCCTCAGTTCTGCATCTCCACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 72 bp | CAGGGGAGAGCGCCTTCTCCTGCCTCAGAGCTCACTTaGCTTAGAAGGAGAATGCAGTTGCCTAAGGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: QGRAPSPASELT*LRRRMQLPKGS Trigger: AGATCCCTTAGGCAACTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGGCAGGAGAAGGCGCTCTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | ACCGGACAAGTACTTCCCACAAATCTCAAGTGGCTTTaGAAGAGGAGAGTGTGCACTCCACCCAGGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGQVLPTNLKWL*KRRVCTPPREG Trigger: GCCTTCCCTGGGTGGAGTGCACACTCTCCTCTTTCAAAGCCACTTGAGATTTGTGGGAAGTACTTGTCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | TTCACCACGGTTCCCCAGAGCCCACCAGAAATATTCTaGCAACTGTTTGCCAAGGCCACACAGCCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FTTVPQSPPEIF*QLFAKATQPAS Trigger: TGAAGCTGGCTGTGTGGCCTTGGCAAACAGTTGTCAGAATATTTCTGGTGGGCTCTGGGGAACCGTGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 72 bp | TGCTGCAAACAGGACACTGACTGTAATGCTAGACGATaGTTCCCATCTCCTCCGAAGGCCAGCTTCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CCKQDTDCNARR*FPSPPKASFTR Trigger: TCTGGTGAAGCTGGCCTTCGGAGGAGATGGGAAGCATCGTCTAGCATTACAGTCAGTGTCCTGTTTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 72 bp | AGGGGAGAGCGCCTTCTCCTGCCTCAGAGCTCACTTTaGTTAGAAGGAGAATGCAGTTGCCTAAGGGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGERLLLPQSSL*LEGECSCLRDL Trigger: AAGATCCCTTAGGCAACTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGGCAGGAGAAGGCGCTCTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 72 bp | ACTGTGAACAGTGAGATGCTGACAAAGGCCATTCTGTaGTGCACGAGTACAGCCTCGGCTTGCTCCATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TVNSEMLTKAIL*CTSTASACSML Trigger: TAGCATGGAGCAAGCCGAGGCTGTACTCGTGCACCACAGAATGGCCTTTGTCAGCATCTCACTGTTCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 72 bp | GACCGGACAAGTACTTCCCACAAATCTCAAGTGGCTTaGAAAGAGGAGAGTGTGCACTCCACCCAGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DRTSTSHKSQVA*KEESVHSTQGR Trigger: CCTTCCCTGGGTGGAGTGCACACTCTCCTCTTTCAAAGCCACTTGAGATTTGTGGGAAGTACTTGTCCGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 90 bp | GATGCTGACAAAGGCCATTCTGTGGTGCACGAGTACAGCCTCGGCTaGCTCCATGCTAAAACTGGTTTTACGGTAGCACATGGTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DADKGHSVVHEYSLG*LHAKTGFTVAHGFS Trigger: GGAGAAACCATGTGCTACCGTAAAACCAGTTTTAGCATGGAGCAAGCCGAGGCTGTACTCGTGCACCACAGAATGGCCTTTGTCAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | TTGTTCCAGGTCAGAGCTGTCATCATCAATCGTCCCTaGAGCAGATACAGCAGAATGGCCTTGGCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LFQVRAVIINRP*SRYSRMALAAA Trigger: TGCTGCTGCCAAGGCCATTCTGCTGTATCTGCTTCAGGGACGATTGATGATGACAGCTCTGACCTGGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | AGGGAGAAGAAGTTGCAACAGTCGAACTGTGAACAGTaGGATGCTGACAAAGGCCATTCTGTGGTGCACGAG | + |
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Preference number: 6 (lower is better) Translates to: REKKLQQSNCEQ*DADKGHSVVHE Trigger: CTCGTGCACCACAGAATGGCCTTTGTCAGCATCTCACTGTTCACAGTTCGACTGTTGCAACTTCTTCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 72 bp | AAGCCAGTTTCAGGATACACAGTATCAGGGAGCTACTaGGGGTGCCTCTGTGTGCAGTTTGAATACACTGTC | + |
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Preference number: 6 (lower is better) Translates to: KPVSGYTVSGSY*GCLCVQFEYTV Trigger: GACAGTGTATTCAAACTGCACACAGAGGCACCCCCAGTAGCTCCCTGATACTGTGTATCCTGAAACTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 72 bp | AAAGGCCATTCTGTGGTGCACGAGTACAGCCTCGGCTaGCTCCATGCTAAAACTGGTTTTACGGTAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: KGHSVVHEYSLG*LHAKTGFTVAH Trigger: ATGTGCTACCGTAAAACCAGTTTTAGCATGGAGCAAGCCGAGGCTGTACTCGTGCACCACAGAATGGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 90 bp | AGCTACTGCTTCCCGGGGATGGGTTTGGGGAATGGTAAGGACCTCTaGCTTCATGACAGTAAGACAAAGAAGAATTCTGGGAGACTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SYCFPGMGLGNGKDL*LHDSKTKKNSGRLC Trigger: ACACAGTCTCCCAGAATTCTTCTTTGTCTTACTGTCATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAAGCAGTAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | GGAGAATGCACAGATATCCTAGAGTTCACATGCGTGTaGCTACTACTTCCACTGGAAGACACTGCATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GECTDILEFTCV*LLLPLEDTASQ Trigger: CTGGGATGCAGTGTCTTCCAGTGGAAGTAGTAGTCACACGCATGTGAACTCTAGGATATCTGTGCATTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | GAGCCTGGTGCCTGGACTATCATCTCATGGGATAAGTaGAGTAAGCAAAGACCTGTGCTCTTTGTAACGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EPGAWTIISWDK*SKQRPVLFVTP Trigger: AGGCGTTACAAAGAGCACAGGTCTTTGCTTACTTCACTTATCCCATGAGATGATAGTCCAGGCACCAGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 72 bp | CCTCAGAGCTCACTTTGCTTAGAAGGAGAATGCAGTTaGCTAAGGGATCTTCTGTATCAGCGTAGCCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: PQSSLCLEGECS*LRDLLYQRSPV Trigger: TACAGGGCTACGCTGATACAGAAGATCCCTTAGGCAACTGCATTCTCCTTCTAAGCAAAGTGAGCTCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 72 bp | TTCCCGGGGATGGGTTTGGGGAATGGTAAGGACCTCTaGCTTCATGACAGTAAGACAAAGAAGAATTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: FPGMGLGNGKDL*LHDSKTKKNSG Trigger: CCCAGAATTCTTCTTTGTCTTACTGTCATGAAGCAAGAGGTCCTTACCATTCCCCAAACCCATCCCCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 72 bp | AGCACTGGAATGACAGGAGCGAGAGATTCGATAAACTaGTTCCAGGTCAGAGCTGTCATCATCAATCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: STGMTGARDSIN*FQVRAVIINRP Trigger: GGGACGATTGATGATGACAGCTCTGACCTGGAACAAGTTTATCGAATCTCTCGCTCCTGTCATTCCAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | ACTGAAGGCAGTCCTTCAACCCACTATCCGTGTATGTaGTCTTCAGTGCAAGGATATCTTCTGTGGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: TEGSPSTHYPCM*SSVQGYLLWTA Trigger: AGCTGTCCACAGAAGATATCCTTGCACTGAAGATCACATACACGGATAGTGGGTTGAAGGACTGCCTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 72 bp | GTTTCAGGATACACAGTATCAGGGAGCTACTGGGGGTaGCTCTGTGTGCAGTTTGAATACACTGTCCATAAT | + |
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Preference number: 6 (lower is better) Translates to: VSGYTVSGSYWG*LCVQFEYTVHN Trigger: ATTATGGACAGTGTATTCAAACTGCACACAGAGGCACCCCCAGTAGCTCCCTGATACTGTGTATCCTGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 72 bp | GTCAGCGTACAAAACCTTCCTCAGGAGTGTGAGGCATaGCTGAATCAAGCATTCTATAACCTCACCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: VSVQNLPQECEA*LNQAFYNLTIL Trigger: CAAGATGGTGAGGTTATAGAATGCTTGATTCAGCCATGCCTCACACTCCTGAGGAAGGTTTTGTACGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CAA 90 bp | TACTGGGGGTGCCTCTGTGTGCAGTTTGAATACACTGTCCATAATTaGACCAACAAAGGGAACTGCAGCCAGCTGGAAAATTTGCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: YWGCLCVQFEYTVHN*TNKGNCSQLENLQY Trigger: ATACTGCAAATTTTCCAGCTGGCTGCAGTTCCCTTTGTTGGTCAAATTATGGACAGTGTATTCAAACTGCACACAGAGGCACCCCCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 72 bp | TCAATCGTCCCTGAAGCAGATACAGCAGAATGGCCTTaGCAGCAGCATTCACCTCATTTTTGGATTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SIVPEADTAEWP*QQHSPHFWILE Trigger: TTCAAGAATCCAAAAATGAGGTGAATGCTGCTGCCAAGGCCATTCTGCTGTATCTGCTTCAGGGACGATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | TATCATCCCAGATTTCTGATGAAATTGCTTGTCCAATaGGCAGCATGTCCTCTGCAAGCAGTTCCAGAACTC | + |
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Preference number: 6 (lower is better) Translates to: YHPRFLMKLLVQ*AACPLQAVPEL Trigger: GAGTTCTGGAACTGCTTGCAGAGGACATGCTGCTCATTGGACAAGCAATTTCATCAGAAATCTGGGATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | TCAGAACCTCCTCTTTCATTGGGACAGATGGGAAATTaGACCATTCGAGCAAATGGAGAAAAAGCAACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SEPPLSLGQMGN*TIRANGEKATF Trigger: AAAGGTTGCTTTTTCTCCATTTGCTCGAATGGTTCAATTTCCCATCTGTCCCAATGAAAGAGGAGGTTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS CCA 72 bp | GATAAAAACTCTACTGCACCAAGGTCAATCAAGTGTTaGACGGCTGGAGAATACTTAACCAATCTGCTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: DKNSTAPRSIKC*TAGEYLTNLLN Trigger: GTTAAGCAGATTGGTTAAGTATTCTCCAGCCGTCCAACACTTGATTGACCTTGGTGCAGTAGAGTTTTTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 72 bp | GTCAGAACCAGCAGGTCTAGTAGTGGACTTGGATTATaGCTAAGAAGTAATTCCAGAATCCAGTTTAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VRTSRSSSGLGL*LRSNSRIQFKS Trigger: ACTTTTAAACTGGATTCTGGAATTACTTCTTAGGCATAATCCAAGTCCACTACTAGACCTGCTGGTTCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS TCA 72 bp | GCCTTGGCAGCAGCATTCACCTCATTTTTGGATTCTTaGATACCAAATGCAGAGATTTCATACAGAACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALAAAFTSFLDS*IPNAEISYRTF Trigger: AAAAGTTCTGTATGAAATCTCTGCATTTGGTATTCAAGAATCCAAAAATGAGGTGAATGCTGCTGCCAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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| CDS GCA 72 bp | CAATTGAATAAACAGCCTCTGCAGTTCGCTTATAAATaGTGTAATTTTCAGAATCCAGCTGTTCCAAATAAG | + |
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Preference number: 6 (lower is better) Translates to: QLNKQPLQFAYK*CNFQNPAVPNK Trigger: CTTATTTGGAACAGCTGGATTCTGAAAATTACAGCATTTATAAGCGAACTGCAGAGGCTGTTTATTCAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023828.9 |
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