Pregenerated sensors for RTP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033355Ensembl transcript IDs: ENSMUST00000038423.6, ENSMUST00000209422.2, ENSMUST00000210901.2, ENSMUST00000211349.2, ENSMUST00000211569.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTACACCAGGTCTGTTACGTGGCATGATTTCTCAGGGGGCACCTTaGCAGGGGCCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LTPGLLRGMISQGAP*QGPCRYSLTPAAAL Trigger: CAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGACCTGGTGTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR GCA 90 bp | CAAGGGCACATCTTCCATGAGAGTTTAGACTGCATGCCTCACAATTaGGTGTGTCGTGGGGCCCATCCAAAGTCACCTTCTCACCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: QGHIFHESLDCMPHN*VCRGAHPKSPSHPK Trigger: CTTTGGGTGAGAAGGTGACTTTGGATGGGCCCCACGACACACGCAATTGTGAGGCATGCAGTCTAAACTCTCATGGAAGATGTGCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR TCA 90 bp | GGAGATCTGGGTGGTTTTACTTTGTGTGCAAGGGCACATCTTCCATaGGAGTTTAGACTGCATGCCTCACAATTGCGTGTGTCGTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: GDLGGFTLCARAHLP*EFRLHASQLRVSWG Trigger: GCCCCACGACACACGCAATTGTGAGGCATGCAGTCTAAACTCTCATGGAAGATGTGCCCTTGCACACAAAGTAAAACCACCCAGATCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR GCA 90 bp | GTTTTACTTTGTGTGCAAGGGCACATCTTCCATGAGAGTTTAGACTaGATGCCTCACAATTGCGTGTGTCGTGGGGCCCATCCAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: VLLCVQGHIFHESLD*MPHNCVCRGAHPKS Trigger: TGACTTTGGATGGGCCCCACGACACACGCAATTGTGAGGCATGCAGTCTAAACTCTCATGGAAGATGTGCCCTTGCACACAAAGTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR CCA 90 bp | AGCTCTTTGATGGGGAGGAACTCTTTGGTAATGGAGATGGAGATCTaGGTGGTTTTACTTTGTGTGCAAGGGCACATCTTCCATGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: SSLMGRNSLVMEMEI*VVLLCVQGHIFHES Trigger: ACTCTCATGGAAGATGTGCCCTTGCACACAAAGTAAAACCACCCAGATCTCCATCTCCATTACCAAAGAGTTCCTCCCCATCAAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR CAA 90 bp | TCCCAAAATCCGTATTCCGGGTCTGAGGCGGAGGAGGGCAGCTCTTaGATGGGGAGGAACTCTTTGGTAATGGAGATGGAGATCTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SQNPYSGSEAEEGSS*MGRNSLVMEMEIWV Trigger: CACCCAGATCTCCATCTCCATTACCAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCTCCGCCTCAGACCCGGAATACGGATTTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGGAGGGCAGCTCTTTaGTGGGGAGGAACTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: SIMCGPWFRLFSEHVQESRRAAL*WGGTLW Trigger: CCAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCT...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCTTTGGTAATGGAGATGGAGATCTGGGTGGTTTTACTTTGTGTGCAAGGGTGCATGCCTCACAATTaGGTGTGTCGTGGGGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: NSLVMEMEIWVVLLCVQGCMPHN*VCRGAH Trigger: ATGGGCCCCACGACACACGCAATTGTGAGGCATGCA...CCCTTGCACACAAAGTAAAACCACCCAGATCTCCATCTCCATTACCAAAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTCATGAGAGTTTAGACTaGATGCCTCACAATTGCGTG | + |
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Preference number: 2 (lower is better) Translates to: MCGPWFRLFSEHVQESRFHESLD*MPHNCV Trigger: CACGCAATTGTGAGGCATGCAGTCTAAACTCTCATG...AAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR CAA 90 bp | AGCAAGCTAGTGCAGACAGTTCAGCAACTCAATACAAATCTGTTATaGGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SKLVQTVQQLNTNLL*GPLCVGHGLGYFQS Trigger: GCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCCAATAACAGATTTGTATTGAGTTGCTGAACTGTCTGCACTAGCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCATTATGTGTGGGCCATaGTTTAGGCTATTTTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SIMCGPWFRLFSEHVQESIMCGP*FRLFSE Trigger: CTCTGAAAATAGCCTAAACCATGGCCCACACATAAT...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCTTAATCAACATAGCTTaGGAACAATACGTGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: SIMCGPWFRLFSEHVQESLINIA*EQYVSK Trigger: CTTGCTCACGTATTGTTCTCAAGCTATGTTGATTAA...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATATTATGTGTGGGCCATaGTTTAGGCTATTTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LCVGHGLGYFQSMSRKADIMCGP*FRLFSE Trigger: CTCTGAAAATAGCCTAAACCATGGCCCACACATAAT...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATATACAAATCTGTTATTaGGTCCATTATGTGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LCVGHGLGYFQSMSRKADIQICY*VHYVWA Trigger: GGCCCACACATAATGGACCCAATAACAGATTTGTAT...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| 3UTR-3UTR TCA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTAATCAACATAGCTTaGGAACAATACGTGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LCVGHGLGYFQSMSRKADLINIA*EQYVSK Trigger: CTTGCTCACGTATTGTTCTCAAGCTATGTTGATTAA...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGATTTATTTAATCAACATAGCTTGAGAACAATACGTGAGCAAGCTAGTGCAATTATGTGTGGGCCATaGTTTAGGCTATTTTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QDLFNQHSLRTIREQASAIMCGP*FRLFSE Trigger: CTCTGAAAATAGCCTAAACCATGGCCCACACATAAT...TGCACTAGCTTGCTCACGTATTGTTCTCAAGCTATGTTGATTAAATAAATCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| 3UTR-3UTR CCA 90 bp | GCCGCTTTGTATCTCATAGCACAGGTGACTGTTAGTTATAATCAAGATTTATTTATACAAATCTGTTATTaGGTCCATTATGTGTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: AALYLIAQVTVSYNQDLFIQICY*VHYVWA Trigger: GGCCCACACATAATGGACCCAATAACAGATTTGTAT...AAATAAATCTTGATTATAACTAACAGTCACCTGTGCTATGAGATACAAAGCGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR CCA 72 bp | CAGGGACCTAGGCTTATGTCATCACCTGCTGCCCACTaGGTTCGAGCCAGGTGGTGCAGGGGCAGCCTACTC | + |
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Preference number: 3 (lower is better) Translates to: QGPRLMSSPAAH*VRARWCRGSLL Trigger: GAGTAGGCTGCCCCTGCACCACCTGGCTCGAACCCAGTGGGCAGCAGGTGATGACATAAGCCTAGGTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCTGTTACGTGGCATGATTTCTCAGGGGGCACCTTGGCAGGGGCCCTGCAGGACTCCGGCCGCCGCTTaGTATCTCATAGCACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GLLRGMISQGAPWQGPCRTPAAA*YLIAQV Trigger: CACCTGTGCTATGAGATACAAAGCGGCGGCCGGAGT...CCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR GCA 72 bp | GGCATGATTTCTCAGGGGGCACCTTGGCAGGGGCCCTaGAGGTATTCCCTTACTCCGGCCGCCGCTTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: GMISQGAPWQGP*RYSLTPAAALY Trigger: ATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR CCA 72 bp | GGTCTGTTACGTGGCATGATTTCTCAGGGGGCACCTTaGCAGGGGCCCTGCAGGTATTCCCTTACTCCGGCC | + |
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Preference number: 3 (lower is better) Translates to: GLLRGMISQGAP*QGPCRYSLTPA Trigger: GGCCGGAGTAAGGGAATACCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR CCA 72 bp | CTCACTAATAAACTCCCTTACACCAGGTCTGTTACGTaGCATGATTTCTCAGGGGGCACCTTGGCAGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: LTNKLPYTRSVT*HDFSGGTLAGA Trigger: GGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGACCTGGTGTAAGGGAGTTTATTAGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR-3UTR CAA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTCTCAGGGGGCACCTaGGCAGGGGCCCTGCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: LCVGHGLGYFQSMSRKADFSGGT*AGALQV Trigger: TACCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAA...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR GCA 72 bp | TGTGTGCAAGGGCACATCTTCCATGAGAGTTTAGACTaGATGCCTCACAATTGCGTGTGTCGTGGGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: CVQGHIFHESLD*MPHNCVCRGAH Trigger: ATGGGCCCCACGACACACGCAATTGTGAGGCATGCAGTCTAAACTCTCATGGAAGATGTGCCCTTGCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGCCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTGTATCTCATAGCAAATACAAATCTGTTATaGGGTCCATTATGTGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: QGPCRYSLTPAAALYLIANTNLL*GPLCVG Trigger: GCCCACACATAATGGACCCAATAACAGATTTGTATT...TGCTATGAGATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGGCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTCTGCATGCCTCACAATaGCGTGTGTCGTGGGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: MCGPWFRLFSEHVQESRFLHASQ*RVSWGP Trigger: TGGGCCCCACGACACACGCAATTGTGAGGCATGCAG...AAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR CCA 72 bp | GAGTTTAGACTGCATGCCTCACAATTGCGTGTGTCGTaGGGCCCATCCAAAGTCACCTTCTCACCCAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: EFRLHASQLRVS*GPSKVTFSPKD Trigger: ATCTTTGGGTGAGAAGGTGACTTTGGATGGGCCCCACGACACACGCAATTGTGAGGCATGCAGTCTAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR-3UTR CAA 90 bp | ATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGAACTCCGGCCGCCGCTTaGTATCTCATAGCACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: IMCGPWFRLFSEHVQESRTPAAA*YLIAQV Trigger: CACCTGTGCTATGAGATACAAAGCGGCGGCCGGAGT...TCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR GCA 72 bp | ATCTTCCATGAGAGTTTAGACTGCATGCCTCACAATTaGGTGTGTCGTGGGGCCCATCCAAAGTCACCTTCT | + |
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Preference number: 3 (lower is better) Translates to: IFHESLDCMPHN*VCRGAHPKSPS Trigger: AGAAGGTGACTTTGGATGGGCCCCACGACACACGCAATTGTGAGGCATGCAGTCTAAACTCTCATGGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR CCA 72 bp | ATGGGGAGGAACTCTTTGGTAATGGAGATGGAGATCTaGGTGGTTTTACTTTGTGTGCAAGGGCACATCTTC | + |
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Preference number: 3 (lower is better) Translates to: MGRNSLVMEMEI*VVLLCVQGHIF Trigger: GAAGATGTGCCCTTGCACACAAAGTAAAACCACCCAGATCTCCATCTCCATTACCAAAGAGTTCCTCCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR-3UTR CAA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATATGGGGAGGAACTCTTaGGTAATGGAGATGGAGATC | + |
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Preference number: 3 (lower is better) Translates to: LCVGHGLGYFQSMSRKADMGRNS*VMEMEI Trigger: GATCTCCATCTCCATTACCAAAGAGTTCCTCCCCAT...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| 3UTR CCA 72 bp | TACAAATCTGTTATTGGGTCCATTATGTGTGGGCCATaGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: YKSVIGSIMCGP*FRLFSEHVQES Trigger: GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCCAATAACAGATTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| 3UTR-3UTR CAA 90 bp | ATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGAAATACAAATCTGTTATaGGGTCCATTATGTGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: IMCGPWFRLFSEHVQESRNTNLL*GPLCVG Trigger: GCCCACACATAATGGACCCAATAACAGATTTGTATT...TCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| 3UTR-3UTR CAA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATAATACAAATCTGTTATaGGGTCCATTATGTGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LCVGHGLGYFQSMSRKADNTNLL*GPLCVG Trigger: GCCCACACATAATGGACCCAATAACAGATTTGTATT...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| CDS-3UTR GCA 90 bp | CAGGGGCCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTGTATCTCATAGCACTGCCAAGCACTGTCTaGTGGTGCTGCCTCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: QGPCRYSLTPAAALYLIALPSTV*WCCLHP Trigger: GGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAG...TGCTATGAGATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR CCA 90 bp | CAGGGGCCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTGTATCTCATAGCACCAAGCACTGTCTGCTaGTGCTGCCTCCATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QGPCRYSLTPAAALYLIAPSTVC*CCLHPR Trigger: CCTGGGATGGAGGCAGCACCAGCAGACAGTGCTTGG...TGCTATGAGATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| 3UTR CAA 72 bp | AGGTCTGTTACGTGGCATGATTTCTCAGGGGGCACCTaGGCAGGGGCCCTGCAGGTATTCCCTTACTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RSVTWHDFSGGT*AGALQVFPYSG Trigger: GCCGGAGTAAGGGAATACCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR GCA 90 bp | CCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTGTATCTCATAGCACAGGTGCTGCCAAGCACTGTCTaGTGGTGCTGCCTCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: PCRYSLTPAAALYLIAQVLPSTV*WCCLHP Trigger: GGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAG...CACCTGTGCTATGAGATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR CCA 90 bp | CCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTGTATCTCATAGCACAGGTGCCAAGCACTGTCTGCTaGTGCTGCCTCCATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PCRYSLTPAAALYLIAQVPSTVC*CCLHPR Trigger: CCTGGGATGGAGGCAGCACCAGCAGACAGTGCTTGG...CACCTGTGCTATGAGATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR GCA 90 bp | TCTGTTACGTGGCATGATTTCTCAGGGGGCACCTTGGCAGGGGCCCTGCAGGTATGCATGCCTCACAATTaGGTGTGTCGTGGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SVTWHDFSGGTLAGALQVCMPHN*VCRGAH Trigger: ATGGGCCCCACGACACACGCAATTGTGAGGCATGCA...TACCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR GCA 90 bp | CCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTGTATCTCATAGCACAGGTGTGCATGCCTCACAATTaGGTGTGTCGTGGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PCRYSLTPAAALYLIAQVCMPHN*VCRGAH Trigger: ATGGGCCCCACGACACACGCAATTGTGAGGCATGCA...CACCTGTGCTATGAGATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGCCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTGTATCTCATAGCAAGGGCACATCTTCCATaGGAGTTTAGACTGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: QGPCRYSLTPAAALYLIARAHLP*EFRLHA Trigger: GGCATGCAGTCTAAACTCTCATGGAAGATGTGCCCT...TGCTATGAGATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGGCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR TCA 90 bp | GGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAATCCGTATTCCGGGTCTaGGGCGGAGGAGGGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GSIMCGPWFRLFSEHVQESVFRV*GGGGQL Trigger: GAGCTGCCCTCCTCCGCCTCAGACCCGGAATACGGA...TTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR GCA 90 bp | GGTCTGTTACGTGGCATGATTTCTCAGGGGGCACCTTGGCAGGGGCCCTGCAGGTGGTTTTACTTTGTGTaGAAGGGCACATCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: GLLRGMISQGAPWQGPCRWFYFV*KGTSSM Trigger: CATGGAAGATGTGCCCTTGCACACAAAGTAAAACCA...CCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR TCA 90 bp | ATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATCCGTATTCCGGGTCTaGGGCGGAGGAGGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IMCGPWFRLFSEHVQESRSVFRV*GGGGQL Trigger: GAGCTGCCCTCCTCCGCCTCAGACCCGGAATACGGA...TCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCACTGTCTGCTGGTGCTaGCTCCATCCCAGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIMCGPWFRLFSEHVQESTVCWC*LHPRAA Trigger: TGCAGCCCTGGGATGGAGGCAGCACCAGCAGACAGT...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR TCA 90 bp | CCCCACTTCTCTAGGTCCCTGCTTCCCTCACTAATAAACTCCCTTACACCAGGTCACTTCTGGCACTTCTaGCCAAAGATCCTCATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PHFSRSLLPSLINSLTPGHFWHF*PKILMR Trigger: ACGCATGAGGATCTTTGGTCAGAAGTGCCAGAAGTG...ACCTGGTGTAAGGGAGTTTATTAGTGAGGGAAGCAGGGACCTAGAGAAGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTTTATCCGTATTCCGGGTCTaGGGCGGAGGAGGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPWFRLFSEHVQESRFILSVFRV*GGGGQL Trigger: GAGCTGCCCTCCTCCGCCTCAGACCCGGAATACGGA...TAAAATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | TTATTGGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCCTGCCAAGCACTGTCTaGTGGTGCTGCCTCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGPLCVGHGLGYFQSMSLPSTV*WCCLHP Trigger: GGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAG...GGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCCAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTCTGCCAAGCACTGTCTaGTGGTGCTGCCTCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: MCGPWFRLFSEHVQESRFLPSTV*WCCLHP Trigger: GGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAG...AAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCATGCGTGCCTGGCCCTaGGATTTCAAAGTGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIMCGPWFRLFSEHVQESMRAWP*DFKVSG Trigger: CCCGGACACTTTGAAATCGCAGGGCCAGGCACGCAT...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTCCAAGCACTGTCTGCTaGTGCTGCCTCCATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MCGPWFRLFSEHVQESRFPSTVC*CCLHPR Trigger: CCTGGGATGGAGGCAGCACCAGCAGACAGTGCTTGG...AAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| 3UTR CAA 72 bp | GCGGAGGAGGGCAGCTCTTTGATGGGGAGGAACTCTTaGGTAATGGAGATGGAGATCTGGGTGGTTTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: AEEGSSLMGRNS*VMEMEIWVVLL Trigger: AAGTAAAACCACCCAGATCTCCATCTCCATTACCAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCTCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTACTGTCTGCTGGTGCTaGCTCCATCCCAGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGPWFRLFSEHVQESRFITVCWC*LHPRAA Trigger: TGCAGCCCTGGGATGGAGGCAGCACCAGCAGACAGT...AATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGAATGCGTGCCTGGCCCTaGGATTTCAAAGTGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IMCGPWFRLFSEHVQESRMRAWP*DFKVSG Trigger: CCCGGACACTTTGAAATCGCAGGGCCAGGCACGCAT...TCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR TCA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATAGGAGGGCAGCTCTTTaGTGGGGAGGAACTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCVGHGLGYFQSMSRKADRRAAL*WGGTLW Trigger: CCAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCT...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | TTATTGGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCTGCATGCCTCACAATTaGGTGTGTCGTGGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGPLCVGHGLGYFQSMSCMPHN*VCRGAH Trigger: ATGGGCCCCACGACACACGCAATTGTGAGGCATGCA...GGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCCAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | AACTCCCTTACACCAGGTCTGTTACGTGGCATGATTTCTCAGGGGGCACCTTGGTGGTTTTACTTTGTGTaGAAGGGCACATCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NSLTPGLLRGMISQGAPWWFYFV*KGTSSM Trigger: CATGGAAGATGTGCCCTTGCACACAAAGTAAAACCA...CCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGACCTGGTGTAAGGGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTACGTGGCATGATTTCTCAGGGGGCACCTTGGCAGGGGCCCTGCAGGTAACTAAAAAGGGCAAATaGAGCAATAGACAAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SVTWHDFSGGTLAGALQVTKKGK*SNRQKQ Trigger: CTGTTTTTGTCTATTGCTGCATTTGCCCTTTTTAGT...TACCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
||
| CDS-3UTR TCA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGGGCACATCTTCCATaGGAGTTTAGACTGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIMCGPWFRLFSEHVQESRAHLP*EFRLHA Trigger: GGCATGCAGTCTAAACTCTCATGGAAGATGTGCCCT...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTAGGAGGGCAGCTCTTTaGTGGGGAGGAACTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGPWFRLFSEHVQESRFIRRAAL*WGGTLW Trigger: CCAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCT...AATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTGGAACACTGGAACCTaGCAAGCACTGTCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCVGHGLGYFQSMSRKADWNTGT*QALSAG Trigger: ACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCA...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATGGAACACTGGAACCTaGCAAGCACTGTCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IMCGPWFRLFSEHVQESRWNTGT*QALSAG Trigger: ACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCA...TCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTTTAATGCGTGCCTGGCCCTaGGATTTCAAAGTGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPWFRLFSEHVQESRFILMRAWP*DFKVSG Trigger: CCCGGACACTTTGAAATCGCAGGGCCAGGCACGCAT...TAAAATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR CCA 90 bp | GGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTTTATCCAAGCACTGTCTGCTaGTGCTGCCTCCATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHGLGYFQSMSRKADLFYPSTVC*CCLHPR Trigger: CCTGGGATGGAGGCAGCACCAGCAGACAGTGCTTGG...ATAAAATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR TCA 90 bp | ATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGACACTTCTGGCACTTCTaGCCAAAGATCCTCATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IMCGPWFRLFSEHVQESRHFWHF*PKILMR Trigger: ACGCATGAGGATCTTTGGTCAGAAGTGCCAGAAGTG...TCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTTTAAGGAGGGCAGCTCTTTaGTGGGGAGGAACTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPWFRLFSEHVQESRFILRRAAL*WGGTLW Trigger: CCAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCT...TAAAATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGAATGTTCTTATCCAAATaGAGGCTCCACTTGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IMCGPWFRLFSEHVQESRMFLSK*RLHLAP Trigger: CGGGGCCAAGTGGAGCCTGCATTTGGATAAGAACAT...TCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR GCA 90 bp | AATCAACATAGCTTGAGAACAATACGTGAGCAAGCTAGTGCAGACAGTTCAGCATGGAACACTGGAACCTaGCAAGCACTGTCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NQHSLRTIREQASADSSAWNTGT*QALSAG Trigger: ACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCA...TGCTGAACTGTCTGCACTAGCTTGCTCACGTATTGTTCTCAAGCTATGTTGATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR CCA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAACTTCTGCAGCATCTaGAACACTGGAACCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIMCGPWFRLFSEHVQESNFCSI*NTGTCQ Trigger: TTGGCAGGTTCCAGTGTTCCAGATGCTGCAGAAGTT...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTCACTTCTGGCACTTCTaGCCAAAGATCCTCATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CGPWFRLFSEHVQESRFIHFWHF*PKILMR Trigger: ACGCATGAGGATCTTTGGTCAGAAGTGCCAGAAGTG...AATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAATTGGGAGTCTCAAATTaGCATCCAAAACACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSIMCGPWFRLFSEHVQELGVSN*HPKHFW Trigger: CCAGAAGTGTTTTGGATGTCAATTTGAGACTCCCAA...TTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR TCA 90 bp | AATCAACATAGCTTGAGAACAATACGTGAGCAAGCTAGTGCAGACAGTTCAGCAAGGGCACATCTTCCATaGGAGTTTAGACTGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: NQHSLRTIREQASADSSARAHLP*EFRLHA Trigger: GGCATGCAGTCTAAACTCTCATGGAAGATGTGCCCT...TGCTGAACTGTCTGCACTAGCTTGCTCACGTATTGTTCTCAAGCTATGTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTATGTTCTTATCCAAATaGAGGCTCCACTTGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CGPWFRLFSEHVQESRFIMFLSK*RLHLAP Trigger: CGGGGCCAAGTGGAGCCTGCATTTGGATAAGAACAT...AATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAATCTCTGTGGAGAACTTaGGAGTCTCAAATTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: GSIMCGPWFRLFSEHVQESLWRT*ESQIDI Trigger: GATGTCAATTTGAGACTCCCAAGTTCTCCACAGAGA...TTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR TCA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCTTGGGAGTCTCAAATTaGCATCCAAAACACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIMCGPWFRLFSEHVQESLGVSN*HPKHFW Trigger: CCAGAAGTGTTTTGGATGTCAATTTGAGACTCCCAA...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCGGCCGCCGCTTTGTATCTCATAGCACAGGTGACTGTTAGTTATAATCAAATGGAGATGGAGATCTaGGTGGTTTTACTTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPAAALYLIAQVTVSYNQMEMEI*VVLLCV Trigger: CACACAAAGTAAAACCACCCAGATCTCCATCTCCAT...TTGATTATAACTAACAGTCACCTGTGCTATGAGATACAAAGCGGCGGCCGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTTTATATGTTCTTATCCAAATaGAGGCTCCACTTGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GHGLGYFQSMSRKADLFYMFLSK*RLHLAP Trigger: CGGGGCCAAGTGGAGCCTGCATTTGGATAAGAACAT...ATAAAATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR GCA 90 bp | AATCAACATAGCTTGAGAACAATACGTGAGCAAGCTAGTGCAGACAGTTCAGCACATGAGAGTTTAGACTaGATGCCTCACAATTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NQHSLRTIREQASADSSAHESLD*MPHNCV Trigger: CACGCAATTGTGAGGCATGCAGTCTAAACTCTCATG...TGCTGAACTGTCTGCACTAGCTTGCTCACGTATTGTTCTCAAGCTATGTTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTCTCTGTGGAGAACTTaGGAGTCTCAAATTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LCVGHGLGYFQSMSRKADSLWRT*ESQIDI Trigger: GATGTCAATTTGAGACTCCCAAGTTCTCCACAGAGA...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR CCA 90 bp | ATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATCTCTGTGGAGAACTTaGGAGTCTCAAATTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: IMCGPWFRLFSEHVQESRSLWRT*ESQIDI Trigger: GATGTCAATTTGAGACTCCCAAGTTCTCCACAGAGA...TCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATGGAGATGGAGATCTaGGTGGTTTTACTTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MCGPWFRLFSEHVQESRFMEMEI*VVLLCV Trigger: CACACAAAGTAAAACCACCCAGATCTCCATCTCCAT...AAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATATGGAGATGGAGATCTaGGTGGTTTTACTTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCVGHGLGYFQSMSRKADMEMEI*VVLLCV Trigger: CACACAAAGTAAAACCACCCAGATCTCCATCTCCAT...ATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
||
| 3UTR CAA 72 bp | GTGCAGACAGTTCAGCAACTCAATACAAATCTGTTATaGGGTCCATTATGTGTGGGCCATGGTTTAGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VQTVQQLNTNLL*GPLCVGHGLGY Trigger: ATAGCCTAAACCATGGCCCACACATAATGGACCCAATAACAGATTTGTATTGAGTTGCTGAACTGTCTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTTTATGGTTTTACTTTGTGTaGAAGGGCACATCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GPWFRLFSEHVQESRFILWFYFV*KGTSSM Trigger: CATGGAAGATGTGCCCTTGCACACAAAGTAAAACCA...TAAAATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR GCA 90 bp | CAAGATTTATTTAATCAACATAGCTTGAGAACAATACGTGAGCAAGCTAGTGCACATGAGAGTTTAGACTaGATGCCTCACAATTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: QDLFNQHSLRTIREQASAHESLD*MPHNCV Trigger: CACGCAATTGTGAGGCATGCAGTCTAAACTCTCATG...TGCACTAGCTTGCTCACGTATTGTTCTCAAGCTATGTTGATTAAATAAATCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR GCA 90 bp | TGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTACTAAAAAGGGCAAATaGAGCAATAGACAAAAACAG | + |
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Preference number: 4 (lower is better) Translates to: CGPWFRLFSEHVQESRFITKKGK*SNRQKQ Trigger: CTGTTTTTGTCTATTGCTGCATTTGCCCTTTTTAGT...AATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR GCA 90 bp | AATCAACATAGCTTGAGAACAATACGTGAGCAAGCTAGTGCAGACAGTTCAGCAACTAAAAAGGGCAAATaGAGCAATAGACAAAAACAG | + |
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Preference number: 4 (lower is better) Translates to: NQHSLRTIREQASADSSATKKGK*SNRQKQ Trigger: CTGTTTTTGTCTATTGCTGCATTTGCCCTTTTTAGT...TGCTGAACTGTCTGCACTAGCTTGCTCACGTATTGTTCTCAAGCTATGTTGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS CCA 90 bp | AAGCACTGTCTGCTGGTGCTGCCTCCATCCCAGGGCTGCACCATCTaGTACAATGTTCTTATCCAAATGCAGGCTCCACTTGGCCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: KHCLLVLPPSQGCTI*YNVLIQMQAPLGPG Trigger: CCCGGGGCCAAGTGGAGCCTGCATTTGGATAAGAACATTGTACCAGATGGTGCAGCCCTGGGATGGAGGCAGCACCAGCAGACAGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 ENSMUST00000211569.2 |
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| CDS GCA 90 bp | CAACTTCTGCAGCATCTGGAACACTGGAACCTGCCAAGCACTGTCTaGTGGTGCTGCCTCCATCCCAGGGCTGCACCATCTGGTACAATG | + |
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Preference number: 5 (lower is better) Translates to: QLLQHLEHWNLPSTV*WCCLHPRAAPSGTM Trigger: CATTGTACCAGATGGTGCAGCCCTGGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCAGATGCTGCAGAAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS-3UTR CAA 90 bp | GGTCTGTTACGTGGCATGATTTCTCAGGGGGCACCTTGGCAGGGGCCCTGCAGGCTCCTGCATCAGTTCTaGAAATGTCTGCTCCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: GLLRGMISQGAPWQGPCRLLHQF*KCLLPS Trigger: ACTTGGGAGCAGACATTTCAAGAACTGATGCAGGAG...CCTGCAGGGCCCCTGCCAAGGTGCCCCCTGAGAAATCATGCCACGTAACAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS GCA 90 bp | CTCCATCCCAGGGCTGCACCATCTGGTACAATGTTCTTATCCAAATaGAGGCTCCACTTGGCCCCGGGCTTCTCCTCCTGCATCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LHPRAAPSGTMFLSK*RLHLAPGFSSCISS Trigger: AGAACTGATGCAGGAGGAGAAGCCCGGGGCCAAGTGGAGCCTGCATTTGGATAAGAACATTGTACCAGATGGTGCAGCCCTGGGATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 ENSMUST00000211569.2 |
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| CDS GCA 90 bp | CAGCATCTGGAACACTGGAACCTGCCAAGCACTGTCTGCTGGTGCTaGCTCCATCCCAGGGCTGCACCATCTGGTACAATGTTCTTATCC | + |
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Preference number: 5 (lower is better) Translates to: QHLEHWNLPSTVCWC*LHPRAAPSGTMFLS Trigger: GGATAAGAACATTGTACCAGATGGTGCAGCCCTGGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCAGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS GCA 90 bp | GGTACATGTGGCACAAGATCATCACCTGAGCAGAGGTCCAACTTCTaGAGCATCTGGAACACTGGAACCTGCCAAGCACTGTCTGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: GTCGTRSSPEQRSNF*SIWNTGTCQALSAG Trigger: ACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCAGATGCTGCAGAAGTTGGACCTCTGCTCAGGTGATGATCTTGTGCCACATGTACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS-3UTR CAA 90 bp | ACTCCGGCCGCCGCTTTGTATCTCATAGCACAGGTGACTGTTAGTTATAATCAAAAATGCAGGCTCCACTaGGCCCCGGGCTTCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TPAAALYLIAQVTVSYNQKCRLH*APGFSS Trigger: GGAGGAGAAGCCCGGGGCCAAGTGGAGCCTGCATTT...TTGATTATAACTAACAGTCACCTGTGCTATGAGATACAAAGCGGCGGCCGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR CAA 90 bp | ATGCCTCACAATTGCGTGTGTCGTGGGGCCCATCCAAAGTCACCTTCTCACCCACTCCTGCATCAGTTCTaGAAATGTCTGCTCCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: MPHNCVCRGAHPKSPSHPLLHQF*KCLLPS Trigger: ACTTGGGAGCAGACATTTCAAGAACTGATGCAGGAG...TGGGTGAGAAGGTGACTTTGGATGGGCCCCACGACACACGCAATTGTGAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| CDS GCA 90 bp | ACATCCAAAACACTTCTGGCACTTCTGACCAAAGATCCTCATGCGTaGCTGGCCCTGCGATTTCAAAGTGTCCGGGTACATGTGGCACAA | + |
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Preference number: 5 (lower is better) Translates to: TSKTLLALLTKDPHA*LALRFQSVRVHVAQ Trigger: TTGTGCCACATGTACCCGGACACTTTGAAATCGCAGGGCCAGGCACGCATGAGGATCTTTGGTCAGAAGTGCCAGAAGTGTTTTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS GCA 90 bp | ATTGACATCCAAAACACTTCTGGCACTTCTGACCAAAGATCCTCATaGGTGCCTGGCCCTGCGATTTCAAAGTGTCCGGGTACATGTGGC | + |
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Preference number: 5 (lower is better) Translates to: IDIQNTSGTSDQRSS*VPGPAISKCPGTCG Trigger: GCCACATGTACCCGGACACTTTGAAATCGCAGGGCCAGGCACGCATGAGGATCTTTGGTCAGAAGTGCCAGAAGTGTTTTGGATGTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS CCA 90 bp | CTGCACCATCTGGTACAATGTTCTTATCCAAATGCAGGCTCCACTTaGCCCCGGGCTTCTCCTCCTGCATCAGTTCTTGAAATGTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LHHLVQCSYPNAGST*PRASPPASVLEMSA Trigger: AGCAGACATTTCAAGAACTGATGCAGGAGGAGAAGCCCGGGGCCAAGTGGAGCCTGCATTTGGATAAGAACATTGTACCAGATGGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 ENSMUST00000211569.2 |
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| CDS-3UTR CAA 90 bp | CCCTGCAGGTATTCCCTTACTCCGGCCGCCGCTTTGTATCTCATAGCACAGGTGCTTGGGAGTCTCAAATaGACATCCAAAACACTTCTG | + |
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Preference number: 5 (lower is better) Translates to: PCRYSLTPAAALYLIAQVLGSLK*TSKTLL Trigger: CAGAAGTGTTTTGGATGTCAATTTGAGACTCCCAAG...CACCTGTGCTATGAGATACAAAGCGGCGGCCGGAGTAAGGGAATACCTGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR CAA 90 bp | GGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAGAGGAGGGCAGCTCTTaGATGGGGAGGAACTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: GSIMCGPWFRLFSEHVQEEEGSS*MGRNSL Trigger: CAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCTC...TTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTCTGCATGCCTCACAATaGCGTGTGTCGTGGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: CGPWFRLFSEHVQESRFILHASQ*RVSWGP Trigger: TGGGCCCCACGACACACGCAATTGTGAGGCATGCAG...AATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | GGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTTTACTGCATGCCTCACAATaGCGTGTGTCGTGGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GPWFRLFSEHVQESRFILLHASQ*RVSWGP Trigger: TGGGCCCCACGACACACGCAATTGTGAGGCATGCAG...TAAAATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | GGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAACTCCTGCATCAGTTCTaGAAATGTCTGCTCCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: GSIMCGPWFRLFSEHVQELLHQF*KCLLPS Trigger: ACTTGGGAGCAGACATTTCAAGAACTGATGCAGGAG...TTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 |
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| CDS-3UTR CAA 90 bp | CCCCACTTCTCTAGGTCCCTGCTTCCCTCACTAATAAACTCCCTTACACCAGGTCTTGGGAGTCTCAAATaGACATCCAAAACACTTCTG | + |
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Preference number: 5 (lower is better) Translates to: PHFSRSLLPSLINSLTPGLGSLK*TSKTLL Trigger: CAGAAGTGTTTTGGATGTCAATTTGAGACTCCCAAG...ACCTGGTGTAAGGGAGTTTATTAGTGAGGGAAGCAGGGACCTAGAGAAGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS-3UTR CAA 90 bp | GGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTTTATCTGCATGCCTCACAATaGCGTGTGTCGTGGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GHGLGYFQSMSRKADLFYLHASQ*RVSWGP Trigger: TGGGCCCCACGACACACGCAATTGTGAGGCATGCAG...ATAAAATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | AATCAACATAGCTTGAGAACAATACGTGAGCAAGCTAGTGCAGACAGTTCAGCAGAGGAGGGCAGCTCTTaGATGGGGAGGAACTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: NQHSLRTIREQASADSSAEEGSS*MGRNSL Trigger: CAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCTC...TGCTGAACTGTCTGCACTAGCTTGCTCACGTATTGTTCTCAAGCTATGTTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTGAGGAGGGCAGCTCTTaGATGGGGAGGAACTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: CGPWFRLFSEHVQESRFIEEGSS*MGRNSL Trigger: CAAAGAGTTCCTCCCCATCAAAGAGCTGCCCTCCTC...AATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | TCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCATGGGGAGGAACTCTTaGGTAATGGAGATGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: SIMCGPWFRLFSEHVQESMGRNS*VMEMEI Trigger: GATCTCCATCTCCATTACCAAAGAGTTCCTCCCCAT...GCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | TTATTGGGTCCATTATGTGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCATGGGGAGGAACTCTTaGGTAATGGAGATGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: LLGPLCVGHGLGYFQSMSMGRNS*VMEMEI Trigger: GATCTCCATCTCCATTACCAAAGAGTTCCTCCCCAT...GGACATGCTCTGAAAATAGCCTAAACCATGGCCCACACATAATGGACCCAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS GCA 90 bp | CCCATCCAAAGTCACCTTCTCACCCAAAGATGCATTCGAGGTCAATaGTATCTTCCTGTGTCCATAGTATCTCTGCAGAATATAATTAAC | + |
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Preference number: 5 (lower is better) Translates to: PIQSHLLTQRCIRGQ*YLPVSIVSLQNIIN Trigger: GTTAATTATATTCTGCAGAGATACTATGGACACAGGAAGATAGCATTGACCTCGAATGCATCTTTGGGTGAGAAGGTGACTTTGGATGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGCCATGGTTTAGGCTATTTTCAGAGCATGTCCAGGAAAGCAGATTTATTCTTGGGAGTCTCAAATaGACATCCAAAACACTTCTG | + |
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Preference number: 5 (lower is better) Translates to: CGPWFRLFSEHVQESRFILGSLK*TSKTLL Trigger: CAGAAGTGTTTTGGATGTCAATTTGAGACTCCCAAG...AATAAATCTGCTTTCCTGGACATGCTCTGAAAATAGCCTAAACCATGGCCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 |
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| CDS-3UTR CAA 90 bp | GCCGCTTTGTATCTCATAGCACAGGTGACTGTTAGTTATAATCAAGATTTATTTCTCCTGCATCAGTTCTaGAAATGTCTGCTCCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AALYLIAQVTVSYNQDLFLLHQF*KCLLPS Trigger: ACTTGGGAGCAGACATTTCAAGAACTGATGCAGGAG...AAATAAATCTTGATTATAACTAACAGTCACCTGTGCTATGAGATACAAAGCGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 |
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| CDS CCA 72 bp | CATCTGGAACACTGGAACCTGCCAAGCACTGTCTGCTaGTGCTGCCTCCATCCCAGGGCTGCACCATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HLEHWNLPSTVC*CCLHPRAAPSG Trigger: ACCAGATGGTGCAGCCCTGGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS CCA 72 bp | CCTGTGTCCATAGTATCTCTGCCAAGCACTGTCTGCTaGTGCTGCCTCCATCCCAGGGCTGCACCATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PVSIVSLPSTVC*CCLHPRAAPSG Trigger: ACCAGATGGTGCAGCCCTGGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAGAGATACTATGGACACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211349.2 |
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| CDS GCA 72 bp | AGGGCTGCACCATCTGGTACAATGTTCTTATCCAAATaGAGGCTCCACTTGGCCCCGGGCTTCTCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RAAPSGTMFLSK*RLHLAPGFSSC Trigger: GCAGGAGGAGAAGCCCGGGGCCAAGTGGAGCCTGCATTTGGATAAGAACATTGTACCAGATGGTGCAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 ENSMUST00000211569.2 |
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| CDS GCA 72 bp | AGGTCCAACTTCTGCAGCATCTGGAACACTGGAACCTaGCAAGCACTGTCTGCTGGTGCTGCCTCCATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSNFCSIWNTGT*QALSAGAASIP Trigger: TGGGATGGAGGCAGCACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCAGATGCTGCAGAAGTTGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS TCA 72 bp | CACTTGGCCCCGGGCTTCTCCTCCTGCATCAGTTCTTaGAATGTCTGCTCCCAAGTACTGAAGTCATCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HLAPGFSSCISS*NVCSQVLKSSG Trigger: CCCCGATGACTTCAGTACTTGGGAGCAGACATTTCAAGAACTGATGCAGGAGGAGAAGCCCGGGGCCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 ENSMUST00000211569.2 |
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| CDS GCA 72 bp | GGCACAAGATCATCACCTGAGCAGAGGTCCAACTTCTaGAGCATCTGGAACACTGGAACCTGCCAAGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: GTRSSPEQRSNF*SIWNTGTCQAL Trigger: CAGTGCTTGGCAGGTTCCAGTGTTCCAGATGCTGCAGAAGTTGGACCTCTGCTCAGGTGATGATCTTGTGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS CCA 72 bp | CTGCTGGTGCTGCCTCCATCCCAGGGCTGCACCATCTaGTACAATGTTCTTATCCAAATGCAGGCTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: LLVLPPSQGCTI*YNVLIQMQAPL Trigger: AAGTGGAGCCTGCATTTGGATAAGAACATTGTACCAGATGGTGCAGCCCTGGGATGGAGGCAGCACCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211349.2 ENSMUST00000211569.2 |
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| CDS CCA 72 bp | TCATCACCTGAGCAGAGGTCCAACTTCTGCAGCATCTaGAACACTGGAACCTGCCAAGCACTGTCTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSPEQRSNFCSI*NTGTCQALSAG Trigger: ACCAGCAGACAGTGCTTGGCAGGTTCCAGTGTTCCAGATGCTGCAGAAGTTGGACCTCTGCTCAGGTGATGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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| CDS GCA 72 bp | CAAAACACTTCTGGCACTTCTGACCAAAGATCCTCATaGGTGCCTGGCCCTGCGATTTCAAAGTGTCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QNTSGTSDQRSS*VPGPAISKCPG Trigger: ACCCGGACACTTTGAAATCGCAGGGCCAGGCACGCATGAGGATCTTTGGTCAGAAGTGCCAGAAGTGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038423.6 ENSMUST00000209422.2 ENSMUST00000210901.2 ENSMUST00000211569.2 |
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