Pregenerated sensors for RTP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066319Ensembl transcript IDs: ENSMUST00000084922.6, ENSMUST00000198702.2, ENSMUST00000199891.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAGTTGTGGGGAATTGAACTCAGGATTTCTGGAGCAGCACCTGTaGCCTGTCCAGCAGGTCCAGTTATTCGAGGGTCTCGAGGGGACC | + |
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Preference number: 1 (lower is better) Translates to: CSCGELNSGFLEQHL*PVQQVQLFEGLEGT Trigger: GGTCCCCTCGAGACCCTCGAATAACTGGACCTGCTGGACAGGTCACAGGTGCTGCTCCAGAAATCCTGAGTTCAATTCCCCACAACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR GCA 90 bp | ATGAGAAGCTGCTACCATTTCCACCAAATCCCCAAATATCTTCATTaGTCTTCTCCACAAAGGTCACATTGCTTAAACCGTGGCTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: MRSCYHFHQIPKYLH*SSPQRSHCLNRGFY Trigger: ATAAAAGCCACGGTTTAAGCAATGTGACCTTTGTGGAGAAGAGCAATGAAGATATTTGGGGATTTGGTGGAAATGGTAGCAGCTTCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR CAA 90 bp | AATGAGAAGCTGCTACCATTTCCACCAAATCCCCAAATATCTTCATaGCTCTTCTCCACAAAGGTCACATTGCTTAAACCGTGGCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: NEKLLPFPPNPQISS*LFSTKVTLLKPWLL Trigger: TAAAAGCCACGGTTTAAGCAATGTGACCTTTGTGGAGAAGAGCAATGAAGATATTTGGGGATTTGGTGGAAATGGTAGCAGCTTCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR TCA 72 bp | CTTGGTGGTATTAGGGTGTGGTCAGGACATCGGCGATaGCTTAGGGCTGGAACATTCTGTGGTTGTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LGGIRVWSGHRR*LRAGTFCGCSQ Trigger: CTGAGAACAACCACAGAATGTTCCAGCCCTAAGTCATCGCCGATGTCCTGACCACACCCTAATACCACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR TCA 72 bp | GATGATGTTGTGAGCCACCATGTAGTTGTGGGGAATTaGACTCAGGATTTCTGGAGCAGCACCTGTGACCTG | + |
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Preference number: 3 (lower is better) Translates to: DDVVSHHVVVGN*TQDFWSSTCDL Trigger: CAGGTCACAGGTGCTGCTCCAGAAATCCTGAGTTCAATTCCCCACAACTACATGGTGGCTCACAACATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR-3UTR CAA 90 bp | GACGAGAACCTTGTGCGAATAACGACAAGGAAACGTTCTGAGTTGCATCAAGGCCCCACTCAAGAGCTTTaGGTTTTTGTTTTCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: DENLVRITTRKRSELHQGPTQEL*VFVFKA Trigger: AGCCTTGAAAACAAAAACCAAAAGCTCTTGAGTGGG...GCCTTGATGCAACTCAGAACGTTTCCTTGTCGTTATTCGCACAAGGTTCTCGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR CCA 72 bp | TTGCTCTTCTCCACAAAGGTCACATTGCTTAAACCGTaGCTTTTATACTTTCCCCTTGCTCCAGTCCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: LLFSTKVTLLKP*LLYFPLAPVLV Trigger: TACCAGGACTGGAGCAAGGGGAAAGTATAAAAGCCACGGTTTAAGCAATGTGACCTTTGTGGAGAAGAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR CCA 72 bp | ATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTaGACTCTACTGATTTTATTGACCTTTCACATAAAG | + |
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Preference number: 3 (lower is better) Translates to: ILSPCSSPGSHL*TLLILLTFHIK Trigger: CTTTATGTGAAAGGTCAATAAAATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR-3UTR CAA 90 bp | GACGAGAACCTTGTGCGAATAACGACAAGGAAACGTTCTGAGTTGCATCAAGGCACTCTACTGATTTTATaGACCTTTCACATAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: DENLVRITTRKRSELHQGTLLIL*TFHIKG Trigger: CCCCTTTATGTGAAAGGTCAATAAAATCAGTAGAGT...GCCTTGATGCAACTCAGAACGTTTCCTTGTCGTTATTCGCACAAGGTTCTCGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR-3UTR CAA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCACCCCAAATATCTTCATaGCTCTTCTCCACAAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: TNHLKIENSAAFNEKLLPPQISS*LFSTKV Trigger: GACCTTTGTGGAGAAGAGCAATGAAGATATTTGGGG...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| 3UTR GCA 72 bp | TTATTGATGTATTTTAGAACGTTTTATTTGCACATATaGCTGCATGACAGAAGAGAGCATCAGATGCCATTA | + |
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Preference number: 3 (lower is better) Translates to: LLMYFRTFYLHI*LHDRREHQMPL Trigger: TAATGGCATCTGATGCTCTCTTCTGTCATGCAGGCATATGTGCAAATAAAACGTTCTAAAATACATCAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR TCA 90 bp | ACCGTGGCTTTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTGGGTGCTGGTGGTTTTaGGGTGCAGCTAACTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TVAFILSPCSSPGSHLWTGCWWF*GAANFG Trigger: CCCAAAGTTAGCTGCACCTCAAAACCACCAGCACCC...AGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAAAGCCACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTAGGCCTCACAGTTGCTaGTGTCATGTGGCCCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLRPHSC*CHVALR Trigger: TCGAAGGGCCACATGACAGCAGCAACTGTGAGGCCT...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTCTTTGCTACATCTGCTaGTCTGCTGCCGTCGATGGG | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLLCYIC*SAAVDG Trigger: CCCATCGACGGCAGCAGAGCAGCAGATGTAGCAAAG...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTTCTTCACCCACCCCTTaGCCTTCTTCTCACACCACC | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLSSPTP*PSSHTT Trigger: GGTGGTGTGAGAAGAAGGCCAAGGGGTGGGTGAAGA...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | ACCGTGGCTTTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTGTGGACTCTGTGACATaGAATTACAGGCGGCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TVAFILSPCSSPGSHLWTVDSVT*NYRRPH Trigger: GTGAGGCCGCCTGTAATTGCATGTCACAGAGTCCAC...AGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAAAGCCACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTATAGGAGGAAGTGGGTaGGACATAGGAGGAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLIGGSG*DIGGSG Trigger: CCCACTTCCTCCTATGTCCCACCCACTTCCTCCTAT...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTGGACATAGGAGGAAGTaGGTGGGACATAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLGHRRK*VGHRRK Trigger: CTTCCTCCTATGTCCCACCCACTTCCTCCTATGTCC...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTGGACATAAGAGGAAGTaGGCGGGACATAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLGHKRK*AGHRRK Trigger: CTTCCTCCTATGTCCCGCCCACTTCCTCTTATGTCC...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR TCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTTTTAGAGGAGGGCCGTaGGGAGGAAATGTTGCTACA | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLFRGGP*GGNVAT Trigger: TGTAGCAACATTTCCTCCTCACGGCCCTCCTCTAAA...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | ACCGTGGCTTTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTATGAGGGTCCATTTGTaGCAGGGTTTCACCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TVAFILSPCSSPGSHLWTMRVHL*QGFTSC Trigger: GCAAGAGGTGAAACCCTGGCACAAATGGACCCTCAT...AGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAAAGCCACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTTTCTGGAGTTGCAAATaGAGGCTCGGGGCACTGATT | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLFWSCK*RLGALI Trigger: AATCAGTGCCCCGAGCCTCCATTTGCAACTCCAGAA...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | TTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTCTACTGATTGACAGGCCTCACAGTTaGTGCTGTCATGTGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: FILSPCSSPGSHLWTLLIDRPHS*CCHVAL Trigger: AAGGGCCACATGACAGCAGCAACTGTGAGGCCTGTC...AATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR TCA 90 bp | TTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTCTACTGATTAATGGGCACAATAACTaGGGAGGAAGTGGGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FILSPCSSPGSHLWTLLINGHNN*GGSGWD Trigger: GTCCCACCCACTTCCTCCTCAGTTATTGTGCCCATT...AATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTGTCTTTTGCTGGTATTaGGTCCATCCTGGCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLVFCWY*VHPGFK Trigger: TTTGAAGCCAGGATGGACGCAATACCAGCAAAAGAC...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTCTAGCAAAGGTCTTTTaGTGGTATTGCGTCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLLAKVF*WYCVHP Trigger: AGGATGGACGCAATACCAGCAAAAGACCTTTGCTAG...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | GACGAGAACCTTGTGCGAATAACGACAAGGAAACGTTCTGAGTTGCATCAAGGCGTGGCCCTTCGAGACTaGTGTTCCCTAGCAAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: DENLVRITTRKRSELHQGVALRD*CSLAKE Trigger: TTCCTTTGCTAGGGAACACCAGTCTCGAAGGGCCAC...GCCTTGATGCAACTCAGAACGTTTCCTTGTCGTTATTCGCACAAGGTTCTCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | GATGACTTAGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGGACATAGGAGGAAGTaGGTGGGACGTATAAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: DDLGLEHSVVVLRISVSVGHRRK*VGRIKG Trigger: CCCCTTTATACGTCCCACCCACTTCCTCCTATGTCC...CACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCTAAGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR TCA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCACTTGGGCTCCCTGGCTaGCTTCGAGGAGGTAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TNHLKIENSAAFNEKLLPLGLPG*LRGGRR Trigger: TCTCCTACCTCCTCGAAGTCAGCCAGGGAGCCCAAG...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR TCA 90 bp | TTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTCTACTGATTGTGGGAGAAGGCATTTaGATGACACATGTAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FILSPCSSPGSHLWTLLIVGEGI*MTHVGA Trigger: TGCCCCTACATGTGTCATTCAAATGCCTTCTCCCAC...AATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR TCA 90 bp | GACGAGAACCTTGTGCGAATAACGACAAGGAAACGTTCTGAGTTGCATCAAGGCCTTTGCGGGTGGATATaGCTGTTTCTCTCTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: DENLVRITTRKRSELHQGLCGWI*LFLSTW Trigger: CCAAGTAGAGAGAAACAGTCATATCCACCCGCAAAG...GCCTTGATGCAACTCAGAACGTTTCCTTGTCGTTATTCGCACAAGGTTCTCGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCACTACATCTGCTGCTCTaGTGCCGTCGATGGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TNHLKIENSAAFNEKLLPLHLLL*CRRWEW Trigger: CCACTCCCATCGACGGCAGCAGAGCAGCAGATGTAG...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | GATGACTTAGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGTATTGCGTCCATCCTaGCTTCAAAACGTTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: DDLGLEHSVVVLRISVSVVLRPS*LQNVGK Trigger: CTTCCCAACGTTTTGAAGCCAGGATGGACGCAATAC...CACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCTAAGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | GATGACTTAGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGAGCAGGAAGGACAGTaGAACCTAGCAAAGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: DDLGLEHSVVVLRISVSVEQEGQ*NLAKVF Trigger: AAAGACCTTTGCTAGGTTCCACTGTCCTTCCTGCTC...CACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCTAAGTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | GACGAGAACCTTGTGCGAATAACGACAAGGAAACGTTCTGAGTTGCATCAAGGCATGCCTTTGGGGTCTTaGATCTGGTGTTCTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: DENLVRITTRKRSELHQGMPLGS*IWCSPL Trigger: CAAAGGAGAACACCAGATCCAAGACCCCAAAGGCAT...GCCTTGATGCAACTCAGAACGTTTCCTTGTCGTTATTCGCACAAGGTTCTCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR TCA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCAGGCGGCCTCACAGCATaGGTACCTGAAGATCTCACA | + |
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Preference number: 4 (lower is better) Translates to: TNHLKIENSAAFNEKLLPGGLTA*VPEDLT Trigger: TGTGAGATCTTCAGGTACTCATGCTGTGAGGCCGCC...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | TTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTCTACTGATTCTGGCTTCAAAACGTTaGGAAGAAGGTTCTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: FILSPCSSPGSHLWTLLILASKR*EEGSCL Trigger: CAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAG...AATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCACTCTGCTGCCGTCGATaGGAGTGGGAGAAGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: TNHLKIENSAAFNEKLLPLCCRR*EWEKAF Trigger: AAATGCCTTCTCCCACTCCCATCGACGGCAGCAGAG...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | GACGAGAACCTTGTGCGAATAACGACAAGGAAACGTTCTGAGTTGCATCAAGGCTTGGGGTCTTGGATCTaGTGTTCTCCTTTGCTACAT | + |
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Preference number: 4 (lower is better) Translates to: DENLVRITTRKRSELHQGLGSWI*CSPLLH Trigger: ATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAA...GCCTTGATGCAACTCAGAACGTTTCCTTGTCGTTATTCGCACAAGGTTCTCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | GATGACTTAGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGCACTTCTTCAGAATTTaGAAGAGCAGGTTGTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: DDLGLEHSVVVLRISVSVHFFRI*KSRLFK Trigger: CTTGAACAACCTGCTCTTCCAAATTCTGAAGAAGTG...CACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCTAAGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR GCA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCATCTGGTGTTCTCCTTTaGTACATCTGCTGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TNHLKIENSAAFNEKLLPSGVLL*YICCSA Trigger: AGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGA...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR TCA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCAGTTGTTCAAGATCCTTaGGATGTTGTCCCAAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TNHLKIENSAAFNEKLLPVVQDP*DVVPSD Trigger: GTCACTTGGGACAACATCTCAAGGATCTTGAACAAC...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CCA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCACTGTTTCTCTCTACTTaGCAAATAGTGTTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TNHLKIENSAAFNEKLLPLFLST*QIVFSG Trigger: ACCAGAAAACACTATTTGCCAAGTAGAGAGAAACAG...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS CCA 90 bp | AAGTGGGCGGGACATAGGAGGAAGTGGGTGGGACATAGGAGGAAGTaGGTGGGACATAGGAGGAAGTGGGTGGGACGTATAAAGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: KWAGHRRKWVGHRRK*VGHRRKWVGRIKGM Trigger: CATCCCCTTTATACGTCCCACCCACTTCCTCCTATGTCCCACCCACTTCCTCCTATGTCCCACCCACTTCCTCCTATGTCCCGCCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CCA 90 bp | AAGTGGGTGGGACATAAGAGGAAGTGGGCGGGACATAGGAGGAAGTaGGTGGGACATAGGAGGAAGTGGGTGGGACATAGGAGGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: KWVGHKRKWAGHRRK*VGHRRKWVGHRRKW Trigger: CCACTTCCTCCTATGTCCCACCCACTTCCTCCTATGTCCCACCCACTTCCTCCTATGTCCCGCCCACTTCCTCTTATGTCCCACCCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CCA 90 bp | AAGTGGGTGGGACATAGGAGGAAGTGGGTGGGACATAGGAGGAAGTaGGTGGGACGTATAAAGGGGATGAGAGCAATGCCTTTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: KWVGHRRKWVGHRRK*VGRIKGMRAMPLGS Trigger: AGACCCCAAAGGCATTGCTCTCATCCCCTTTATACGTCCCACCCACTTCCTCCTATGTCCCACCCACTTCCTCCTATGTCCCACCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTGGGGTGCTGGTGGTTTaGAGGCTTGGCCTAAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLGVLVV*RLGLSH Trigger: ATGACTTAGGCCAAGCCTCAAAACCACCAGCACCCC...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS GCA 90 bp | CTTCTCACACCACCGCATGTGGAAGACTATCAGAACTCGGCCAGATaGCCAACTTCGAGAGCAGGAAGGACAGTGGAACCTAGCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLTPPHVEDYQNSAR*PTSRAGRTVEPSKG Trigger: ACCTTTGCTAGGTTCCACTGTCCTTCCTGCTCTCGAAGTTGGGCATCTGGCCGAGTTCTGATAGTCTTCCACATGCGGTGGTGTGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS GCA 90 bp | TGCCTTTGGGGTCTTGGATCTGGTGTTCTCCTTTGCTACATCTGCTaGTCTGCTGCCGTCGATGGGAGTGGGAGAAGGCATTTGAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: CLWGLGSGVLLCYIC*SAAVDGSGRRHLND Trigger: GTCATTCAAATGCCTTCTCCCACTCCCATCGACGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CCA 90 bp | GGACGTATAAAGGGGATGAGAGCAATGCCTTTGGGGTCTTGGATCTaGTGTTCTCCTTTGCTACATCTGCTGCTCTGCTGCCGTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GRIKGMRAMPLGSWI*CSPLLHLLLCCRRW Trigger: CCATCGACGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGCTCTCATCCCCTTTATACGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CCA 90 bp | TGGGTGGGACGTATAAAGGGGATGAGAGCAATGCCTTTGGGGTCTTaGATCTGGTGTTCTCCTTTGCTACATCTGCTGCTCTGCTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: WVGRIKGMRAMPLGS*IWCSPLLHLLLCCR Trigger: ACGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGCTCTCATCCCCTTTATACGTCCCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | TTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTCTACTGATTCAGGTGACAGTGACCTaGGGCTCCCTGGCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FILSPCSSPGSHLWTLLIQVTVT*GSLADF Trigger: GAAGTCAGCCAGGGAGCCCAAGGTCACTGTCACCTG...AATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTCGTGAGGAGGAAATGTaGCTACAGGTGACAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLREEEM*LQVTVT Trigger: GGTCACTGTCACCTGTAGCAACATTTCCTCCTCACG...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
||
| CDS GCA 90 bp | CAATGCCTTTGGGGTCTTGGATCTGGTGTTCTCCTTTGCTACATCTaGTGCTCTGCTGCCGTCGATGGGAGTGGGAGAAGGCATTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QCLWGLGSGVLLCYI*CSAAVDGSGRRHLN Trigger: ATTCAAATGCCTTCTCCCACTCCCATCGACGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS TCA 90 bp | TCGCAGCAGGCCCCACAGCAGGAAGACTGGCTTTGCGGGTGGATATaGCTGTTTCTCTCTACTTGGCAAATAGTGTTTTCTGGTAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQQAPQQEDWLCGWI*LFLSTWQIVFSGSL Trigger: GAGACTACCAGAAAACACTATTTGCCAAGTAGAGAGAAACAGTCATATCCACCCGCAAAGCCAGTCTTCCTGCTGTGGGGCCTGCTGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | GATGACTTAGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGCGCGAGGAGGAAATGTaGCTACAGGTGACAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: DDLGLEHSVVVLRISVSVREEEM*LQVTVT Trigger: GGTCACTGTCACCTGTAGCAACATTTCCTCCTCGCG...CACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCTAAGTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS GCA 90 bp | CAACTTCGAGAGCAGGAAGGACAGTGGAACCTAGCAAAGGTCTTTTaGTGGTATTGCGTCCATCCTGGCTTCAAAACGTTGGGAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLREQEGQWNLAKVF*WYCVHPGFKTLGRR Trigger: CCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCTTCCTGCTCTCGAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CCA 90 bp | CTTCGAGAGCAGGAAGGACAGTGGAACCTAGCAAAGGTCTTTTGCTaGTATTGCGTCCATCCTGGCTTCAAAACGTTGGGAAGAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LREQEGQWNLAKVFC*YCVHPGFKTLGRRF Trigger: GAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCTTCCTGCTCTCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
||
| CDS-3UTR CAA 90 bp | TTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTCTACTGATTGGTATGAGGGTCCATTaGTGCCAGGGTTTCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FILSPCSSPGSHLWTLLIGMRVH*CQGFTS Trigger: AGAGGTGAAACCCTGGCACAAATGGACCCTCATACC...AATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS TCA 90 bp | TCCATCCTGGCTTCAAAACGTTGGGAAGAAGGTTCTTGTCTGGTATaGGGGTCCATTTGTGCCAGGGTTTCACCTCTTGCATTAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SILASKRWEEGSCLV*GSICARVSPLALAP Trigger: AGGAGCTAATGCAAGAGGTGAAACCCTGGCACAAATGGACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS GCA 90 bp | AAAACGTTGGGAAGAAGGTTCTTGTCTGGTATGAGGGTCCATTTGTaGCAGGGTTTCACCTCTTGCATTAGCTCCTGGAACACATGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KTLGRRFLSGMRVHL*QGFTSCISSWNTCR Trigger: GCGACATGTGTTCCAGGAGCTAATGCAAGAGGTGAAACCCTGGCACAAATGGACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS GCA 90 bp | GAGCAGGAAGGACAGTGGAACCTAGCAAAGGTCTTTTGCTGGTATTaGGTCCATCCTGGCTTCAAAACGTTGGGAAGAAGGTTCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EQEGQWNLAKVFCWY*VHPGFKTLGRRFLS Trigger: AGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCTTCCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTGCACTTCTTCAGAATTaGGAAGAGCAGGTTGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLALLQN*EEQVVQ Trigger: TTGAACAACCTGCTCTTCCAAATTCTGAAGAAGTGC...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGGCCCGCTTATCTTGGGGTCATTTTaGGTAGGATTACTGGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RAGTFCGCSQNQCVGGPLILGSF*VGLLVW Trigger: CCAAACCAGTAATCCTACCAAAAATGACCCCAAGAT...AAGCGGGCCACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | GATGACTTAGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGATCTGGTGTTCTCCTTaGCTACATCTGCTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DDLGLEHSVVVLRISVSVIWCSP*LHLLLC Trigger: GCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGAT...CACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCTAAGTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | TTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTCTACTGATTATGAGAGCAATGCCTTaGGGGTCTTGGATCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FILSPCSSPGSHLWTLLIMRAMP*GSWIWC Trigger: ACACCAGATCCAAGACCCCAAAGGCATTGCTCTCAT...AATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS TCA 90 bp | TTTGGAAGAGCAGGTTGTTCAAGATCCTTGAGATGTTGTCCCAAGTaGCTTCTGGAGTTGCAAATGGAGGCTCGGGGCACTGATTACATC | + |
|
Preference number: 5 (lower is better) Translates to: FGRAGCSRSLRCCPK*LLELQMEARGTDYI Trigger: GATGTAATCAGTGCCCCGAGCCTCCATTTGCAACTCCAGAAGTCACTTGGGACAACATCTCAAGGATCTTGAACAACCTGCTCTTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CCA 90 bp | ACAGTGGAACCTAGCAAAGGTCTTTTGCTGGTATTGCGTCCATCCTaGCTTCAAAACGTTGGGAAGAAGGTTCTTGTCTGGTATGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TVEPSKGLLLVLRPS*LQNVGKKVLVWYEG Trigger: ACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | GATGACTTAGGGCTGGAACATTCTGTGGTTGTTCTCAGAATCAGTGTGTCGGTGTTGGGAAGAAGGTTCTaGTCTGGTATGAGGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DDLGLEHSVVVLRISVSVLGRRF*SGMRVH Trigger: ATGGACCCTCATACCAGACAAGAACCTTCTTCCCAA...CACCGACACACTGATTCTGAGAACAACCACAGAATGTTCCAGCCCTAAGTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCAAGACAGGCCTCACAGTaGCTGCTGTCATGTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TNHLKIENSAAFNEKLLPRQASQ*LLSCGP Trigger: AGGGCCACATGACAGCAGCAACTGTGAGGCCTGTCT...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | GACGAGAACCTTGTGCGAATAACGACAAGGAAACGTTCTGAGTTGCATCAAGGCAATGCCTTTGGGGTCTaGGATCTGGTGTTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DENLVRITTRKRSELHQGNAFGV*DLVFSF Trigger: AAAGGAGAACACCAGATCCAAGACCCCAAAGGCATT...GCCTTGATGCAACTCAGAACGTTTCCTTGTCGTTATTCGCACAAGGTTCTCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCAATCTTCACCCACCCCTaGGCCTTCTTCTCACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TNHLKIENSAAFNEKLLPIFTHP*AFFSHH Trigger: GTGGTGTGAGAAGAAGGCCAAGGGGTGGGTGAAGAT...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS TCA 90 bp | ATAGCACTTCTTCAGAATTTGGAAGAGCAGGTTGTTCAAGATCCTTaGGATGTTGTCCCAAGTGACTTCTGGAGTTGCAAATGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IALLQNLEEQVVQDP*DVVPSDFWSCKWRL Trigger: GAGCCTCCATTTGCAACTCCAGAAGTCACTTGGGACAACATCTCAAGGATCTTGAACAACCTGCTCTTCCAAATTCTGAAGAAGTGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCAGAGGTGCAGCTAACTTaGGGGTCATTTTTGGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TNHLKIENSAAFNEKLLPEVQLT*GSFLVG Trigger: CCCTACCAAAAATGACCCCAAAGTTAGCTGCACCTC...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | TTTATACTTTCCCCTTGCTCCAGTCCTGGTAGCCACCTCTGGACTCTACTGATTACTGTTTCTCTCTACTaGGCAAATAGTGTTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FILSPCSSPGSHLWTLLITVSLY*ANSVFW Trigger: CCAGAAAACACTATTTGCCAAGTAGAGAGAAACAGT...AATCAGTAGAGTCCAGAGGTGGCTACCAGGACTGGAGCAAGGGGAAAGTATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCAACTTTGGGGTCATTTTaGGTAGGGTTACTGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TNHLKIENSAAFNEKLLPTLGSF*VGLLAW Trigger: CCAAGCCAGTAACCCTACCAAAAATGACCCCAAAGT...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS-3UTR CAA 90 bp | ACTAACCATCTGAAGATAGAAAACTCAGCGGCTTTTAATGAGAAGCTGCTACCAAAGATCCTTGAGATGTaGTCCCAAGTGACTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TNHLKIENSAAFNEKLLPKILEM*SQVTSG Trigger: TCCAGAAGTCACTTGGGACAACATCTCAAGGATCTT...TGGTAGCAGCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS CAA 90 bp | GCTTGGGGCATCTGTACTTTAGAGGAGGGCCGCGAGGAGGAAATGTaGCTACAGGTGACAGTGACCTTGGGCTCCCTGGCTGACTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AWGICTLEEGREEEM*LQVTVTLGSLADFE Trigger: CTCGAAGTCAGCCAGGGAGCCCAAGGTCACTGTCACCTGTAGCAACATTTCCTCCTCGCGGCCCTCCTCTAAAGTACAGATGCCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084922.6 |
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| CDS CAA 90 bp | GCTTGGGGCATCTGTACTTTAGAGGAGGGCCGTGAGGAGGAAATGTaGCTACAGGTGACAGTGACCTTGGGCTCCCTGGCTGACTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AWGICTLEEGREEEM*LQVTVTLGSLADFE Trigger: CTCGAAGTCAGCCAGGGAGCCCAAGGTCACTGTCACCTGTAGCAACATTTCCTCCTCACGGCCCTCCTCTAAAGTACAGATGCCCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
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| CDS CAA 72 bp | GGACTCGCAGCAGGCCCCACAGCAGGAAGACTGGCTTaGCGGGTGGATATGACTGTTTCTCTCTACTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLAAGPTAGRLA*RVDMTVSLYLA Trigger: TGCCAAGTAGAGAGAAACAGTCATATCCACCCGCAAAGCCAGTCTTCCTGCTGTGGGGCCTGCTGCGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CAA 90 bp | GGGATGAGAGCAATGCCTTTGGGGTCTTGGATCTGGTGTTCTCCTTaGCTACATCTGCTGCTCTGCTGCCGTCGATGGGAGTGGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GMRAMPLGSWIWCSP*LHLLLCCRRWEWEK Trigger: CTTCTCCCACTCCCATCGACGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGCTCTCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS GCA 72 bp | CCACCGCATGTGGAAGACTATCAGAACTCGGCCAGATaGCCAACTTCGAGAGCAGGAAGGACAGTGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: PPHVEDYQNSAR*PTSRAGRTVEP Trigger: AGGTTCCACTGTCCTTCCTGCTCTCGAAGTTGGGCATCTGGCCGAGTTCTGATAGTCTTCCACATGCGGTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS GCA 72 bp | GGTCTTGGATCTGGTGTTCTCCTTTGCTACATCTGCTaGTCTGCTGCCGTCGATGGGAGTGGGAGAAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLGSGVLLCYIC*SAAVDGSGRRH Trigger: ATGCCTTCTCCCACTCCCATCGACGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS CCA 72 bp | ACCCACCCCTTGGCCTTCTTCTCACACCACCGCATGTaGAAGACTATCAGAACTCGGCCAGATGCCCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: THPLAFFSHHRM*KTIRTRPDAQL Trigger: AAGTTGGGCATCTGGCCGAGTTCTGATAGTCTTCCACATGCGGTGGTGTGAGAAGAAGGCCAAGGGGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS CCA 72 bp | GTAGGGTTACTGGCTTGGGGGTTCACTTTTGATGCTTaGGGCATCTGTACTTTAGAGGAGGGCCGCGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VGLLAWGFTFDA*GICTLEEGREE Trigger: CTCCTCGCGGCCCTCCTCTAAAGTACAGATGCCCCAAGCATCAAAAGTGAACCCCCAAGCCAGTAACCCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084922.6 |
||
| CDS CCA 72 bp | ATAAGAGGAAGTGGGCGGGACATAGGAGGAAGTGGGTaGGACATAGGAGGAAGTGGGTGGGACATAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IRGSGRDIGGSG*DIGGSGWDIGG Trigger: TCCTCCTATGTCCCACCCACTTCCTCCTATGTCCCACCCACTTCCTCCTATGTCCCGCCCACTTCCTCTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS CAA 72 bp | GCAATGCCTTTGGGGTCTTGGATCTGGTGTTCTCCTTaGCTACATCTGCTGCTCTGCTGCCGTCGATGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AMPLGSWIWCSP*LHLLLCCRRWE Trigger: CTCCCATCGACGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS CAA 90 bp | GTGGGTGGGACGTATAAAGGGGATGAGAGCAATGCCTTTGGGGTCTaGGATCTGGTGTTCTCCTTTGCTACATCTGCTGCTCTGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VGGTYKGDESNAFGV*DLVFSFATSAALLP Trigger: CGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGCTCTCATCCCCTTTATACGTCCCACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS CCA 72 bp | GTAGGGTTACTGGCTTGGGGGTTCACTTTTGATGCTTaGGGCATCTGTACTTTAGAGGAGGGCCGTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VGLLAWGFTFDA*GICTLEEGREE Trigger: CTCCTCACGGCCCTCCTCTAAAGTACAGATGCCCCAAGCATCAAAAGTGAACCCCCAAGCCAGTAACCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
||
| CDS CAA 72 bp | ATCTGTACTTTAGAGGAGGGCCGTGAGGAGGAAATGTaGCTACAGGTGACAGTGACCTTGGGCTCCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ICTLEEGREEEM*LQVTVTLGSLA Trigger: AGCCAGGGAGCCCAAGGTCACTGTCACCTGTAGCAACATTTCCTCCTCACGGCCCTCCTCTAAAGTACAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199891.2 |
||
| CDS GCA 72 bp | TGGATCTGGTGTTCTCCTTTGCTACATCTGCTGCTCTaGTGCCGTCGATGGGAGTGGGAGAAGGCATTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WIWCSPLLHLLL*CRRWEWEKAFE Trigger: TTCAAATGCCTTCTCCCACTCCCATCGACGGCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS CCA 72 bp | CCTCACAGTTGCTGCTGTCATGTGGCCCTTCGAGACTaGTGTTCCCTAGCAAAGGAATCTCACCCATTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PHSCCCHVALRD*CSLAKESHPFA Trigger: AGCAAATGGGTGAGATTCCTTTGCTAGGGAACACCAGTCTCGAAGGGCCACATGACAGCAGCAACTGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
||
| CDS CCA 72 bp | GTAGGATTACTGGTTTGGGGGTTCACTTTTGATGCTTaGGGCATCTGTACTTTAGAGGAGGGCCGCGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VGLLVWGFTFDA*GICTLEEGREE Trigger: CTCCTCGCGGCCCTCCTCTAAAGTACAGATGCCCCAAGCATCAAAAGTGAACCCCCAAACCAGTAATCCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CCA 72 bp | AAGGGGATGAGAGCAATGCCTTTGGGGTCTTGGATCTaGTGTTCTCCTTTGCTACATCTGCTGCTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KGMRAMPLGSWI*CSPLLHLLLCC Trigger: GCAGCAGAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGCTCTCATCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS TCA 72 bp | GCAGGTTGTTCAAGATCCTTGAGATGTTGTCCCAAGTaGCTTCTGGAGTTGCAAATGGAGGCTCGGGGCACT | + |
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Preference number: 6 (lower is better) Translates to: AGCSRSLRCCPK*LLELQMEARGT Trigger: AGTGCCCCGAGCCTCCATTTGCAACTCCAGAAGTCACTTGGGACAACATCTCAAGGATCTTGAACAACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CAA 90 bp | TGGTATTGCGTCCATCCTGGCTTCAAAACGTTGGGAAGAAGGTTCTaGTCTGGTATGAGGGTCCATTTGTGCCAGGGTTTCACCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: WYCVHPGFKTLGRRF*SGMRVHLCQGFTSC Trigger: GCAAGAGGTGAAACCCTGGCACAAATGGACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CAA 90 bp | CCAACTTCGAGAGCAGGAAGGACAGTGGAACCTAGCAAAGGTCTTTaGCTGGTATTGCGTCCATCCTGGCTTCAAAACGTTGGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PTSRAGRTVEPSKGL*LVLRPSWLQNVGKK Trigger: CTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCTTCCTGCTCTCGAAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS GCA 72 bp | GGAAGAAGGTTCTTGTCTGGTATGAGGGTCCATTTGTaGCAGGGTTTCACCTCTTGCATTAGCTCCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GRRFLSGMRVHL*QGFTSCISSWN Trigger: GTTCCAGGAGCTAATGCAAGAGGTGAAACCCTGGCACAAATGGACCCTCATACCAGACAAGAACCTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS GCA 72 bp | GGACAGTGGAACCTAGCAAAGGTCTTTTGCTGGTATTaGGTCCATCCTGGCTTCAAAACGTTGGGAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GQWNLAKVFCWY*VHPGFKTLGRR Trigger: CCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS GCA 72 bp | GAGCAGGAAGGACAGTGGAACCTAGCAAAGGTCTTTTaGTGGTATTGCGTCCATCCTGGCTTCAAAACGTTG | + |
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Preference number: 6 (lower is better) Translates to: EQEGQWNLAKVF*WYCVHPGFKTL Trigger: CAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCTTCCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CCA 72 bp | CATTTGTGCCAGGGTTTCACCTCTTGCATTAGCTCCTaGAACACATGTCGCCATTGCTCTGTGTCTCCTATG | + |
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Preference number: 6 (lower is better) Translates to: HLCQGFTSCISS*NTCRHCSVSPM Trigger: CATAGGAGACACAGAGCAATGGCGACATGTGTTCCAGGAGCTAATGCAAGAGGTGAAACCCTGGCACAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CCA 72 bp | TCCTGGCTTCAAAACGTTGGGAAGAAGGTTCTTGTCTaGTATGAGGGTCCATTTGTGCCAGGGTTTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: SWLQNVGKKVLV*YEGPFVPGFHL Trigger: GAGGTGAAACCCTGGCACAAATGGACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CCA 72 bp | CAGGAAGGACAGTGGAACCTAGCAAAGGTCTTTTGCTaGTATTGCGTCCATCCTGGCTTCAAAACGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QEGQWNLAKVFC*YCVHPGFKTLG Trigger: TCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CCA 72 bp | CGTATAAAGGGGATGAGAGCAATGCCTTTGGGGTCTTaGATCTGGTGTTCTCCTTTGCTACATCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RIKGMRAMPLGS*IWCSPLLHLLL Trigger: GAGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGCTCTCATCCCCTTTATACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CAA 72 bp | GTCCATCCTGGCTTCAAAACGTTGGGAAGAAGGTTCTaGTCTGGTATGAGGGTCCATTTGTGCCAGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VHPGFKTLGRRF*SGMRVHLCQGF Trigger: GAAACCCTGGCACAAATGGACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CAA 72 bp | TGGGTGGGACGTATAAAGGGGATGAGAGCAATGCCTTaGGGGTCTTGGATCTGGTGTTCTCCTTTGCTACAT | + |
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Preference number: 6 (lower is better) Translates to: WVGRIKGMRAMP*GSWIWCSPLLH Trigger: ATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGCTCTCATCCCCTTTATACGTCCCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CAA 90 bp | GCAAAGGTCTTTTGCTGGTATTGCGTCCATCCTGGCTTCAAAACGTaGGGAAGAAGGTTCTTGTCTGGTATGAGGGTCCATTTGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AKVFCWYCVHPGFKT*GRRFLSGMRVHLCQ Trigger: CTGGCACAAATGGACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CAA 90 bp | AGAGCAGGAAGGACAGTGGAACCTAGCAAAGGTCTTTTGCTGGTATaGCGTCCATCCTGGCTTCAAAACGTTGGGAAGAAGGTTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: RAGRTVEPSKGLLLV*RPSWLQNVGKKVLV Trigger: GACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCTTCCTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS TCA 72 bp | GCTTCAAAACGTTGGGAAGAAGGTTCTTGTCTGGTATaGGGGTCCATTTGTGCCAGGGTTTCACCTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: ASKRWEEGSCLV*GSICARVSPLA Trigger: TGCAAGAGGTGAAACCCTGGCACAAATGGACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS TCA 72 bp | GCCCCACAGCAGGAAGACTGGCTTTGCGGGTGGATATaGCTGTTTCTCTCTACTTGGCAAATAGTGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: APQQEDWLCGWI*LFLSTWQIVFS Trigger: AGAAAACACTATTTGCCAAGTAGAGAGAAACAGTCATATCCACCCGCAAAGCCAGTCTTCCTGCTGTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CCA 72 bp | CCTAGCAAAGGTCTTTTGCTGGTATTGCGTCCATCCTaGCTTCAAAACGTTGGGAAGAAGGTTCTTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSKGLLLVLRPS*LQNVGKKVLVW Trigger: CCAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CAA 72 bp | AGGACAGTGGAACCTAGCAAAGGTCTTTTGCTGGTATaGCGTCCATCCTGGCTTCAAAACGTTGGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RTVEPSKGLLLV*RPSWLQNVGKK Trigger: CTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CAA 72 bp | AGAGCAGGAAGGACAGTGGAACCTAGCAAAGGTCTTTaGCTGGTATTGCGTCCATCCTGGCTTCAAAACGTT | + |
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Preference number: 6 (lower is better) Translates to: RAGRTVEPSKGL*LVLRPSWLQNV Trigger: AACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAAGACCTTTGCTAGGTTCCACTGTCCTTCCTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CAA 72 bp | ACGTATAAAGGGGATGAGAGCAATGCCTTTGGGGTCTaGGATCTGGTGTTCTCCTTTGCTACATCTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TYKGDESNAFGV*DLVFSFATSAA Trigger: AGCAGCAGATGTAGCAAAGGAGAACACCAGATCCAAGACCCCAAAGGCATTGCTCTCATCCCCTTTATACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CAA 90 bp | TTCTTCAGAATTTGGAAGAGCAGGTTGTTCAAGATCCTTGAGATGTaGTCCCAAGTGACTTCTGGAGTTGCAAATGGAGGCTCGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: FFRIWKSRLFKILEM*SQVTSGVANGGSGH Trigger: GTGCCCCGAGCCTCCATTTGCAACTCCAGAAGTCACTTGGGACAACATCTCAAGGATCTTGAACAACCTGCTCTTCCAAATTCTGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS CAA 72 bp | TTTTGCTGGTATTGCGTCCATCCTGGCTTCAAAACGTaGGGAAGAAGGTTCTTGTCTGGTATGAGGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: FCWYCVHPGFKT*GRRFLSGMRVH Trigger: ATGGACCCTCATACCAGACAAGAACCTTCTTCCCAACGTTTTGAAGCCAGGATGGACGCAATACCAGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084922.6 ENSMUST00000198702.2 ENSMUST00000199891.2 |
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| CDS CAA 72 bp | ATTTGGAAGAGCAGGTTGTTCAAGATCCTTGAGATGTaGTCCCAAGTGACTTCTGGAGTTGCAAATGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: IWKSRLFKILEM*SQVTSGVANGG Trigger: GCCTCCATTTGCAACTCCAGAAGTCACTTGGGACAACATCTCAAGGATCTTGAACAACCTGCTCTTCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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| CDS TCA 72 bp | CTTCAGAATTTGGAAGAGCAGGTTGTTCAAGATCCTTaGGATGTTGTCCCAAGTGACTTCTGGAGTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LQNLEEQVVQDP*DVVPSDFWSCK Trigger: TTTGCAACTCCAGAAGTCACTTGGGACAACATCTCAAGGATCTTGAACAACCTGCTCTTCCAAATTCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084922.6 ENSMUST00000199891.2 |
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